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Overview

ID MAG00884
Name DYD1_bin.73
Sample SMP0025
Taxonomy
Kingdom Bacteria
Phylum Chlamydiota
Class Chlamydiia
Order Chlamydiales
Family SM23-39
Genus 2-02-FULL-45-22
Species
Assembly information
Completeness (%) 67.42
Contamination (%) 2.91
GC content (%) 42.0
N50 (bp) 5,377
Genome size (bp) 1,491,770

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1325

Gene name Description KEGG GOs EC E-value Score Sequence
DYD1_k127_1036039_0 AMP nucleosidase K01241 - 3.2.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 371.0
DYD1_k127_1036039_1 tRNA synthetases class II (D, K and N) K04568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001225 285.0
DYD1_k127_1036039_2 membrane - - - 0.000000000000000001608 91.0
DYD1_k127_1165722_0 Together with the serine threonine kinase PknD, may play a role in the specific interactions with host proteins during intracellular growth - - - 1.16e-213 678.0
DYD1_k127_1165722_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 460.0
DYD1_k127_1165722_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03471 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009349 347.0
DYD1_k127_1165722_3 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000003132 161.0
DYD1_k127_1165722_4 Low molecular weight protein-tyrosine-phosphatase K01104 - 3.1.3.48 0.0000000000000000000000000000000000003153 145.0
DYD1_k127_1173899_0 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 370.0
DYD1_k127_1173899_1 ABC transporter K02028 - 3.6.3.21 0.00000000000000000000000000000000000000000000000002248 191.0
DYD1_k127_1173899_2 Psort location Cytoplasmic, score 10.00 K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000005362 181.0
DYD1_k127_1173899_3 amino acid ABC transporter K02029 - - 0.00000000000000000000000000000002906 134.0
DYD1_k127_1173899_4 EamA-like transporter family - - - 0.00000000000000000000000000004134 128.0
DYD1_k127_1173899_5 B3 4 domain - - - 0.00000000000000000000000001588 119.0
DYD1_k127_1173899_6 PFAM Extracellular solute-binding protein, family 3 K02030 - - 0.000000000000000000000001748 113.0
DYD1_k127_1173899_7 SnoaL-like domain - - - 0.000000000000000007688 88.0
DYD1_k127_1173899_8 PFAM Extracellular solute-binding protein, family 3 K02030 - - 0.000000004182 65.0
DYD1_k127_118552_1 Glycosyl transferase family 2 - - - 0.000000000000000000000000000315 124.0
DYD1_k127_118552_2 NlpC/P60 family - - - 0.0000000000003862 74.0
DYD1_k127_1198474_0 Peptidase M3A and M3B thimet oligopeptidase F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 301.0
DYD1_k127_1198474_1 Lysin motif - - - 0.00000000000000000000000000000000000000000000001579 180.0
DYD1_k127_1198474_2 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000001353 91.0
DYD1_k127_1205539_0 ATP:ADP antiporter activity K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006857 313.0
DYD1_k127_1205539_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.0003284 46.0
DYD1_k127_1213513_0 Type III K03222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003368 256.0
DYD1_k127_1213513_1 - - - - 0.00000000000000000000000006252 117.0
DYD1_k127_1249227_0 Heat shock 70 kDa protein K04043 GO:0005575,GO:0005576,GO:0018995,GO:0020003,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0065010 - 3.728e-314 971.0
DYD1_k127_1249227_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001363 277.0
DYD1_k127_1249227_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000000001614 173.0
DYD1_k127_1252626_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000076 366.0
DYD1_k127_1252626_1 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006779 272.0
DYD1_k127_1258348_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 441.0
DYD1_k127_1258348_1 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000002535 249.0
DYD1_k127_1258348_2 NHL repeat - - - 0.0006963 48.0
DYD1_k127_1300171_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 376.0
DYD1_k127_1300171_1 Required for disulfide bond formation in some proteins K03611 - - 0.0000000000000000000000000007772 117.0
DYD1_k127_1300171_2 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.000000000000000003787 93.0
DYD1_k127_1300171_3 Crp Fnr family transcriptional regulator K21563 - - 0.0003881 44.0
DYD1_k127_1310868_0 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000000000004462 261.0
DYD1_k127_1310868_1 reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000005297 237.0
DYD1_k127_1310868_2 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000002007 234.0
DYD1_k127_1310868_3 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000001097 121.0
DYD1_k127_1310868_4 Putative rRNA methylase - - - 0.0000000000000002646 80.0
DYD1_k127_1311932_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008635 286.0
DYD1_k127_1311932_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000002688 74.0
DYD1_k127_1311932_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000005798 51.0
DYD1_k127_1356331_0 ABC transporter K01990 - - 1.574e-194 621.0
DYD1_k127_1356331_1 Biotin-lipoyl like K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009642 300.0
DYD1_k127_1356331_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000006487 97.0
DYD1_k127_1376804_0 2-oxoisovalerate dehydrogenase, e1 component, alpha and beta subunit K00167,K11381 - 1.2.4.4 2.118e-272 853.0
DYD1_k127_1376804_1 Essential cell division protein that coordinates cell division and chromosome segregation. The N-terminus is involved in assembly of the cell-division machinery. The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the dif recombination site, which is located within the replication terminus region. Required for activation of the Xer recombinase, allowing activation of chromosome unlinking by recombination (By similarity) K03466 - - 1.972e-211 665.0
DYD1_k127_1376804_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 325.0
DYD1_k127_1376804_3 May be involved in the transport of PQQ or its precursor to the periplasm K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003261 276.0
DYD1_k127_1376804_4 Transmembrane secretion effector K05939 - 2.3.1.40,6.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000007493 276.0
DYD1_k127_1392512_1 spore germination - - - 0.00000000000000000000000000000001541 138.0
DYD1_k127_1392512_2 radical SAM domain protein - - - 0.00000000000000000000000001102 119.0
DYD1_k127_1393949_0 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 395.0
DYD1_k127_1393949_1 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 327.0
DYD1_k127_1401554_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 415.0
DYD1_k127_1401554_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 370.0
DYD1_k127_1401554_2 ATPase (AAA superfamily) K07133 - - 0.00008068 48.0
DYD1_k127_1417255_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 425.0
DYD1_k127_1417255_1 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 386.0
DYD1_k127_1417255_2 transferase activity, transferring glycosyl groups K02844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001213 265.0
DYD1_k127_143230_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1531.0
DYD1_k127_143230_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000004751 230.0
DYD1_k127_1446184_0 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 1.746e-235 734.0
DYD1_k127_1446184_1 phosphotransferase activity, for other substituted phosphate groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 488.0
DYD1_k127_1446184_10 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000002487 133.0
DYD1_k127_1446184_11 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000002846 130.0
DYD1_k127_1446184_2 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 400.0
DYD1_k127_1446184_3 Uncharacterized protein conserved in bacteria (DUF2179) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 367.0
DYD1_k127_1446184_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 336.0
DYD1_k127_1446184_5 transmembrane transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007575 310.0
DYD1_k127_1446184_6 COG0668 Small-conductance mechanosensitive channel K16052 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003894 306.0
DYD1_k127_1446184_7 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 295.0
DYD1_k127_1446184_8 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002061 251.0
DYD1_k127_1446184_9 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.00000000000000000000000000000000000000000000000000000000002163 211.0
DYD1_k127_1447634_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005653 439.0
DYD1_k127_1447634_1 - - - - 0.000000000000000000000000000000009732 138.0
DYD1_k127_1447634_2 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.000000000000000000000006119 104.0
DYD1_k127_1448143_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 2.626e-266 829.0
DYD1_k127_1448143_1 Protein of unknown function (DUF2764) - - - 0.000000000000000000000000000000000000000000000000000000000000122 221.0
DYD1_k127_1448143_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.000000000000000000000000000000000000000000000000000003148 197.0
DYD1_k127_1452676_0 PAS domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 337.0
DYD1_k127_1452676_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007555 294.0
DYD1_k127_1452676_2 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000007116 269.0
DYD1_k127_1452676_3 OPT oligopeptide transporter protein - - - 0.00000000000000000000000000000000000000000000000001305 185.0
DYD1_k127_1452676_4 In elementary bodies (EBs, the infectious stage, which is able to survive outside the host cell) provides the structural integrity of the outer envelope through disulfide cross-links with the small cysteine-rich protein and the large cysteine-rich periplasmic protein. It has been described in publications as the Sarkosyl-insoluble COMC (Chlamydia outer membrane complex), and serves as the functional equivalent of peptidoglycan K03162 GO:0005575,GO:0005576,GO:0005623,GO:0009986,GO:0018995,GO:0020003,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044464,GO:0065010 - 0.0000006305 55.0
DYD1_k127_1482016_0 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004069 434.0
DYD1_k127_1482016_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006398 292.0
DYD1_k127_1482016_2 Acetyltransferase (GNAT) domain - - - 0.0005841 49.0
DYD1_k127_1520417_0 Chloramphenicol phosphotransferase-like protein K18554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 297.0
DYD1_k127_1520417_1 Bacterial transcription activator, effector binding domain - - - 0.000000000000000000000000000000000000000000000000002403 186.0
DYD1_k127_1520417_2 CAAX protease self-immunity - - - 0.000000000000000000000000026 118.0
DYD1_k127_1520417_3 - - - - 0.00000000000001021 76.0
DYD1_k127_1520417_4 Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions - - - 0.00002014 52.0
DYD1_k127_1527577_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 3.478e-260 808.0
DYD1_k127_1527577_1 ATPase, P-type transporting, HAD superfamily, subfamily IC K01535 - 3.6.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 459.0
DYD1_k127_1527577_2 Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 GO:0000166,GO:0003674,GO:0003824,GO:0003855,GO:0004764,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25,4.2.1.10 0.0000000000000000000000000000000000000000000000000000005053 197.0
DYD1_k127_1527577_3 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K11420 GO:0000003,GO:0000122,GO:0000228,GO:0000280,GO:0000785,GO:0000790,GO:0000976,GO:0000977,GO:0001012,GO:0001067,GO:0001708,GO:0002039,GO:0002165,GO:0002682,GO:0002697,GO:0002831,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005705,GO:0006139,GO:0006259,GO:0006275,GO:0006304,GO:0006305,GO:0006306,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007129,GO:0007130,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007399,GO:0007444,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007614,GO:0007616,GO:0007626,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008345,GO:0008757,GO:0009267,GO:0009410,GO:0009566,GO:0009605,GO:0009719,GO:0009725,GO:0009755,GO:0009791,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010424,GO:0010468,GO:0010506,GO:0010507,GO:0010556,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0010639,GO:0010720,GO:0010769,GO:0010770,GO:0010948,GO:0010975,GO:0010976,GO:0014070,GO:0016043,GO:0016241,GO:0016242,GO:0016278,GO:0016279,GO:0016569,GO:0016570,GO:0016571,GO:0016604,GO:0016607,GO:0016740,GO:0016741,GO:0018022,GO:0018024,GO:0018026,GO:0018027,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0019904,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0023052,GO:0030154,GO:0030182,GO:0030518,GO:0030522,GO:0030534,GO:0030537,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0031344,GO:0031346,GO:0031347,GO:0031399,GO:0031401,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032101,GO:0032259,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032776,GO:0032870,GO:0033043,GO:0033044,GO:0033554,GO:0033993,GO:0034641,GO:0034968,GO:0035075,GO:0035076,GO:0035220,GO:0035265,GO:0035295,GO:0035690,GO:0036166,GO:0036211,GO:0036314,GO:0036315,GO:0040007,GO:0042054,GO:0042220,GO:0042221,GO:0042493,GO:0042594,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043279,GO:0043401,GO:0043412,GO:0043414,GO:0043565,GO:0043900,GO:0044030,GO:0044085,GO:0044087,GO:0044088,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044728,GO:0045132,GO:0045143,GO:0045165,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045786,GO:0045892,GO:0045934,GO:0045995,GO:0046483,GO:0046958,GO:0046959,GO:0046974,GO:0046976,GO:0048148,GO:0048232,GO:0048285,GO:0048468,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048589,GO:0048609,GO:0048663,GO:0048665,GO:0048699,GO:0048731,GO:0048814,GO:0048856,GO:0048869,GO:0050688,GO:0050767,GO:0050769,GO:0050773,GO:0050775,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051052,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051276,GO:0051321,GO:0051567,GO:0051569,GO:0051570,GO:0051574,GO:0051704,GO:0051716,GO:0051726,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0060359,GO:0060429,GO:0061647,GO:0061982,GO:0065007,GO:0070013,GO:0070192,GO:0070193,GO:0070316,GO:0070317,GO:0070734,GO:0070742,GO:0070887,GO:0071242,GO:0071310,GO:0071312,GO:0071314,GO:0071383,GO:0071390,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071496,GO:0071704,GO:0071840,GO:0072347,GO:0080090,GO:0080134,GO:0090304,GO:0097159,GO:0097305,GO:0097306,GO:0098687,GO:0098813,GO:0120035,GO:0140013,GO:0140096,GO:1900006,GO:1900109,GO:1900111,GO:1901360,GO:1901363,GO:1901564,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902115,GO:1902116,GO:1902275,GO:1902679,GO:1902902,GO:1903046,GO:1903506,GO:1903507,GO:1905269,GO:1990837,GO:1990841,GO:2000026,GO:2000112,GO:2000113,GO:2000785,GO:2001141,GO:2001252 2.1.1.43 0.000001881 57.0
DYD1_k127_153222_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 295.0
DYD1_k127_153222_1 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008717 287.0
DYD1_k127_153222_2 Aminotransferase class-V K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002424 289.0
DYD1_k127_153222_3 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000000008157 237.0
DYD1_k127_153222_4 Phosphate K03306 - - 0.0000000000000000000000000000000000000001003 153.0
DYD1_k127_153222_5 PFAM Adenylate cyclase K05873 - 4.6.1.1 0.00000000000000003043 85.0
DYD1_k127_153222_6 NifU protein K13819 - - 0.000001737 56.0
DYD1_k127_154188_0 OPT oligopeptide transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 529.0
DYD1_k127_154188_1 glucose-1-phosphate adenylyltransferase K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 464.0
DYD1_k127_154188_2 wide pore channel activity K07267 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 427.0
DYD1_k127_154188_3 Calcineurin-like phosphoesterase K07099 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009319 313.0
DYD1_k127_154188_4 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009731 286.0
DYD1_k127_154188_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000296 244.0
DYD1_k127_154188_6 - - - - 0.0002845 49.0
DYD1_k127_1577904_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.449e-252 799.0
DYD1_k127_1577904_1 ADP,ATP carrier protein K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 561.0
DYD1_k127_1577904_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 411.0
DYD1_k127_1577904_3 Peptidase family S49 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007547 307.0
DYD1_k127_1577904_4 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000001226 209.0
DYD1_k127_1577904_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000001307 169.0
DYD1_k127_1577904_6 COG0668 Small-conductance mechanosensitive channel K16052 - - 0.000000000000000000000000000000000000000000001856 175.0
DYD1_k127_1582985_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 2.752e-261 816.0
DYD1_k127_1582985_1 SNF2 family - - - 7.482e-247 766.0
DYD1_k127_1582985_2 shape-determining protein MreB K03569 - - 8.694e-201 629.0
DYD1_k127_1582985_3 threonine efflux protein - - - 0.00000000000000000000000364 108.0
DYD1_k127_1584108_0 Lipid A export ATP-binding permease protein K02021,K06147,K06148 - - 4.446e-255 801.0
DYD1_k127_1584108_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005002 446.0
DYD1_k127_1584108_2 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 321.0
DYD1_k127_1584108_3 PFAM NAD dependent epimerase dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000002807 218.0
DYD1_k127_1584108_4 DNA polymerase III, epsilon K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000009451 183.0
DYD1_k127_1584108_5 - - - - 0.00000000347 70.0
DYD1_k127_1601267_0 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 452.0
DYD1_k127_1601267_1 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 0.0000000000351 68.0
DYD1_k127_164437_0 Helix-turn-helix XRE-family like proteins K18831 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 421.0
DYD1_k127_164437_1 TaqI-like C-terminal specificity domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 385.0
DYD1_k127_164437_2 Protein of unknown function (DUF4065) - - - 0.000000000000000000000000001926 117.0
DYD1_k127_164437_5 RelE-like toxin of type II toxin-antitoxin system HigB - - - 0.0000000000007625 72.0
DYD1_k127_164437_6 Helix-turn-helix domain - - - 0.00006021 50.0
DYD1_k127_1675093_0 TLC ATP/ADP transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 515.0
DYD1_k127_1675093_1 Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005963 368.0
DYD1_k127_1675093_2 Alpha/beta hydrolase family K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 317.0
DYD1_k127_1675093_3 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000001751 154.0
DYD1_k127_1675093_4 Lipid A 3-O-deacylase (PagL) - - - 0.000000000000000000000000000005724 125.0
DYD1_k127_1675093_5 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.00000000000000000000000000001367 124.0
DYD1_k127_1675093_6 - - - - 0.000000000003149 67.0
DYD1_k127_1681876_0 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 381.0
DYD1_k127_1681876_1 transketolase activity K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 329.0
DYD1_k127_1681876_2 PFAM Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000707 306.0
DYD1_k127_1681876_3 Glycosyltransferase like family 2 - - - 0.00000000000000000000005048 110.0
DYD1_k127_1685152_0 AMP-binding enzyme K01909 - 6.2.1.20 5.175e-206 672.0
DYD1_k127_1685152_1 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 422.0
DYD1_k127_1685152_2 Myo-inositol oxygenase K00469 - 1.13.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 309.0
DYD1_k127_1685152_3 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 304.0
DYD1_k127_1685152_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003167 282.0
DYD1_k127_1685152_6 - - - - 0.0000000000000000000009558 96.0
DYD1_k127_1685152_7 - - - - 0.000000000000001986 78.0
DYD1_k127_1685152_8 Protein of unknown function (DUF3096) - - - 0.00001158 48.0
DYD1_k127_1685691_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 7.805e-246 769.0
DYD1_k127_1685691_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008682 410.0
DYD1_k127_1685691_2 Tryptophan/tyrosine permease family K03834 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005974 282.0
DYD1_k127_1685691_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000002222 245.0
DYD1_k127_1685691_4 Glycosyltransferase family 92 - - - 0.0000000000000000000000000000000000000000004574 168.0
DYD1_k127_1685691_5 - - - - 0.00000005281 63.0
DYD1_k127_1727394_0 phosphate starvation-inducible protein PhoH K07175 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 580.0
DYD1_k127_1727394_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 406.0
DYD1_k127_1727394_2 Glycosyl transferase family group 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009747 342.0
DYD1_k127_1727394_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000002075 219.0
DYD1_k127_1727394_4 Glycosyltransferase sugar-binding region containing DXD motif - - - 0.000000000000000000000000000002049 128.0
DYD1_k127_1727394_5 SWI complex, BAF60b domains - - - 0.000000000000000443 83.0
DYD1_k127_1727394_7 Glycosyltransferase - - - 0.000004329 51.0
DYD1_k127_1727394_8 PBS lyase HEAT domain protein repeat-containing protein - - - 0.0002096 46.0
DYD1_k127_1771409_0 ATP:ADP antiporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 584.0
DYD1_k127_1771409_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003905 477.0
DYD1_k127_1771409_2 cyclic nucleotide binding K01999,K07001 - - 0.000000000000000000000000000000000002908 141.0
DYD1_k127_1771409_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000003066 145.0
DYD1_k127_1771409_4 - - - - 0.000000001226 64.0
DYD1_k127_1778970_0 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000000000001994 203.0
DYD1_k127_1778970_1 - - - - 0.0000000000000000000002075 102.0
DYD1_k127_1778970_2 Speckle-type POZ protein K10523 - - 0.0000003243 62.0
DYD1_k127_1824665_0 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 408.0
DYD1_k127_1824665_1 lyase activity - - - 0.000000000000000000000000000000000000000000000001827 180.0
DYD1_k127_1824665_2 Fe-S metabolism associated domain K02426 - - 0.000000000000000000000000000000003617 132.0
DYD1_k127_1824665_3 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000007902 87.0
DYD1_k127_1825756_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 397.0
DYD1_k127_1825756_1 Glucose-6-phosphate dehydrogenase subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001973 280.0
DYD1_k127_1825756_2 6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000001316 236.0
DYD1_k127_1887081_0 MORN repeat variant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006371 541.0
DYD1_k127_1887081_1 Conserved hypothetical protein 95 - - - 0.000000000000000000000000000000000008808 142.0
DYD1_k127_1887081_2 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000004305 139.0
DYD1_k127_1887081_3 oxidoreductase activity K07114 - - 0.000002807 51.0
DYD1_k127_1887081_4 - - - - 0.00005226 54.0
DYD1_k127_1901704_0 Tyrosyl-tRNA synthetase K01866 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 449.0
DYD1_k127_1901704_1 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000001718 228.0
DYD1_k127_1901704_2 Belongs to the bacterial histone-like protein family - - - 0.000000000000000000000000000000000000000006433 157.0
DYD1_k127_1901704_4 - - - - 0.0000006431 60.0
DYD1_k127_1911041_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 472.0
DYD1_k127_1911041_1 Outer membrane efflux protein K18139 - - 0.000000000000000000000000001158 117.0
DYD1_k127_1986680_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K12257 - - 0.0 1356.0
DYD1_k127_1986680_1 exonuclease recJ K07462 - - 1.903e-236 743.0
DYD1_k127_1986680_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 481.0
DYD1_k127_1986680_3 hemolysin activation secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007097 317.0
DYD1_k127_1986680_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006766 288.0
DYD1_k127_1986680_5 Cache domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003783 292.0
DYD1_k127_1986680_6 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000001901 213.0
DYD1_k127_1986680_7 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000002371 109.0
DYD1_k127_1986919_0 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 407.0
DYD1_k127_1986919_1 transposase activity K07483 - - 0.00000000000000000000000000000000005248 136.0
DYD1_k127_1986919_2 COG3436 Transposase and inactivated derivatives K07484 - - 0.00007302 46.0
DYD1_k127_1991799_0 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 359.0
DYD1_k127_1991799_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006615 336.0
DYD1_k127_1991799_2 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 311.0
DYD1_k127_1991799_3 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000003158 231.0
DYD1_k127_1991799_4 RNA pseudouridylate synthase K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000343 212.0
DYD1_k127_1991799_5 - - - - 0.00000000000000000000000000000000000000000000000000006592 194.0
DYD1_k127_1991799_6 Probable molybdopterin binding domain K03742 - 3.5.1.42 0.0000000000000000000000000000000000000001439 158.0
DYD1_k127_1991799_7 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000003644 83.0
DYD1_k127_1991799_8 Cyclin - - - 0.00000003897 62.0
DYD1_k127_1994251_0 COG3568 Metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000001403 190.0
DYD1_k127_1994251_1 - - - - 0.000008062 55.0
DYD1_k127_1996277_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 501.0
DYD1_k127_1996277_1 Belongs to the TtcA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 355.0
DYD1_k127_1996277_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 353.0
DYD1_k127_1996277_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000001991 171.0
DYD1_k127_1996277_4 Pfam SEC-C motif - - - 0.00000002806 58.0
DYD1_k127_1996277_5 - - - - 0.0000644 49.0
DYD1_k127_1996277_6 Resolvase, N terminal domain - - - 0.0002688 44.0
DYD1_k127_2049989_0 permease protein K15581 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 367.0
DYD1_k127_2049989_1 ABC transporter (permease) K15582 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 346.0
DYD1_k127_2049989_2 Belongs to the ABC transporter superfamily K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 309.0
DYD1_k127_2049989_3 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000001377 237.0
DYD1_k127_2049989_4 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000006463 58.0
DYD1_k127_2054055_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005814 354.0
DYD1_k127_2054055_1 - - - - 0.00000000000000000005823 98.0
DYD1_k127_2054055_2 - - - - 0.0000000000001394 79.0
DYD1_k127_2054055_3 - - - - 0.000000000002581 72.0
DYD1_k127_2062690_0 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007752 571.0
DYD1_k127_2062690_1 Lantibiotic dehydratase, C terminus K20483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006779 479.0
DYD1_k127_2062690_2 Leucine-rich repeat - CC (cysteine-containing) subfamily K10279,K10280 - - 0.000000000000000000001224 104.0
DYD1_k127_2062690_3 PFAM Short-chain dehydrogenase reductase SDR K00046 - 1.1.1.69 0.000000000000000004221 86.0
DYD1_k127_2063175_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 482.0
DYD1_k127_2063175_1 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008672 402.0
DYD1_k127_2063175_2 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000189 147.0
DYD1_k127_2063175_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000005209 146.0
DYD1_k127_2063175_4 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.000000000000000000000009578 115.0
DYD1_k127_2067659_0 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000189 286.0
DYD1_k127_2067659_1 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000001324 155.0
DYD1_k127_2067659_2 O-methyltransferase activity - - - 0.0000000000000000000000000000000000007902 147.0
DYD1_k127_2074301_0 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member K03581 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007722 287.0
DYD1_k127_2074301_1 transmembrane transporter activity - - - 0.00000000000000000006276 92.0
DYD1_k127_209852_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K01784,K12450 - 4.2.1.46,4.2.1.76,5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 389.0
DYD1_k127_209852_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 344.0
DYD1_k127_209852_2 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000004639 146.0
DYD1_k127_2144688_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K07037 - - 0.0000000003744 61.0
DYD1_k127_2144688_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000003578 49.0
DYD1_k127_2151698_0 Peptidase C26 K07010 - - 0.000000000000003289 88.0
DYD1_k127_2159783_0 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides - - - 5.385e-259 818.0
DYD1_k127_2159783_1 Exopolysaccharide biosynthesis protein YbjH - - - 9.501e-233 740.0
DYD1_k127_2159783_10 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000002983 102.0
DYD1_k127_2159783_11 YGGT family K02221 - - 0.0000000000000000000146 93.0
DYD1_k127_2159783_13 Acylphosphatase K01512 - 3.6.1.7 0.0000000000000001204 82.0
DYD1_k127_2159783_14 YacP-like NYN domain K06962 - - 0.0000000000000001633 85.0
DYD1_k127_2159783_15 - - - - 0.00002405 54.0
DYD1_k127_2159783_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 445.0
DYD1_k127_2159783_3 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 364.0
DYD1_k127_2159783_4 MORN repeat variant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 312.0
DYD1_k127_2159783_5 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000006291 257.0
DYD1_k127_2159783_6 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001671 257.0
DYD1_k127_2159783_7 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000681 201.0
DYD1_k127_2159783_8 - - - - 0.0000000000000000000000000000000000000001393 161.0
DYD1_k127_2159783_9 Pilus assembly protein K02662 - - 0.0000000000000000000000001313 122.0
DYD1_k127_2219553_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.001e-237 745.0
DYD1_k127_2219553_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006,K01007 - 2.7.9.1,2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 297.0
DYD1_k127_2219553_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 291.0
DYD1_k127_2219553_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000001652 209.0
DYD1_k127_2219553_4 DNA polymerase III K02341,K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000006325 190.0
DYD1_k127_2219553_5 protein binding zinc ion binding - - - 0.0003426 52.0
DYD1_k127_2228077_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009688 263.0
DYD1_k127_2235642_0 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000001774 178.0
DYD1_k127_2235642_1 Solute carrier family 12 - - - 0.00000000000000000000000000000000000000000008986 168.0
DYD1_k127_2235642_2 sphinganine-1-phosphate aldolase activity K01634,K20704 GO:0000003,GO:0001501,GO:0001553,GO:0001568,GO:0001570,GO:0001655,GO:0001667,GO:0001822,GO:0001944,GO:0002376,GO:0002520,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005938,GO:0006082,GO:0006629,GO:0006631,GO:0006643,GO:0006665,GO:0006672,GO:0006807,GO:0006873,GO:0006874,GO:0006875,GO:0006915,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006996,GO:0007010,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007283,GO:0007525,GO:0007527,GO:0007548,GO:0008064,GO:0008117,GO:0008150,GO:0008152,GO:0008202,GO:0008209,GO:0008210,GO:0008219,GO:0008406,GO:0008584,GO:0008585,GO:0008610,GO:0009056,GO:0009058,GO:0009267,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009653,GO:0009791,GO:0009887,GO:0009987,GO:0009991,GO:0010171,GO:0010646,GO:0010761,GO:0010817,GO:0012501,GO:0012505,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016477,GO:0016829,GO:0016830,GO:0016832,GO:0019722,GO:0019725,GO:0019752,GO:0019932,GO:0019953,GO:0022414,GO:0022602,GO:0023052,GO:0030003,GO:0030029,GO:0030036,GO:0030097,GO:0030148,GO:0030149,GO:0030154,GO:0030176,GO:0030435,GO:0030587,GO:0030832,GO:0030833,GO:0031156,GO:0031157,GO:0031158,GO:0031224,GO:0031227,GO:0031272,GO:0031273,GO:0031275,GO:0031276,GO:0031344,GO:0031345,GO:0031667,GO:0031668,GO:0031669,GO:0031984,GO:0032101,GO:0032104,GO:0032107,GO:0032271,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032541,GO:0032787,GO:0032956,GO:0032970,GO:0033043,GO:0033327,GO:0033554,GO:0034641,GO:0034754,GO:0035239,GO:0035295,GO:0035556,GO:0040008,GO:0040011,GO:0040014,GO:0042175,GO:0042221,GO:0042330,GO:0042331,GO:0042445,GO:0042592,GO:0042594,GO:0042698,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043436,GO:0043603,GO:0043900,GO:0043934,GO:0044087,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0044703,GO:0045137,GO:0046466,GO:0046467,GO:0046545,GO:0046546,GO:0046660,GO:0046661,GO:0046956,GO:0048008,GO:0048232,GO:0048471,GO:0048511,GO:0048513,GO:0048514,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048608,GO:0048609,GO:0048638,GO:0048646,GO:0048705,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050830,GO:0050896,GO:0051128,GO:0051129,GO:0051179,GO:0051239,GO:0051493,GO:0051674,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0052128,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060021,GO:0060176,GO:0060322,GO:0060323,GO:0060324,GO:0060325,GO:0060491,GO:0061061,GO:0061458,GO:0065007,GO:0065008,GO:0071496,GO:0071704,GO:0071782,GO:0071840,GO:0071944,GO:0072001,GO:0072358,GO:0072359,GO:0072503,GO:0072507,GO:0080134,GO:0080135,GO:0090066,GO:0090702,GO:0097038,GO:0097190,GO:0098542,GO:0098771,GO:0098827,GO:0099120,GO:0099568,GO:0110053,GO:0120032,GO:0120033,GO:0120035,GO:1901360,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1902903 4.1.2.27 0.0000000000000000000000000000000000004664 159.0
DYD1_k127_2241601_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 483.0
DYD1_k127_2241601_1 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 449.0
DYD1_k127_2241601_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 395.0
DYD1_k127_2241601_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 323.0
DYD1_k127_2241601_4 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000002631 250.0
DYD1_k127_2241601_5 Multicopper oxidase K00368,K22348 - 1.16.3.3,1.7.2.1 0.0000000000000000000000000000000000000006599 158.0
DYD1_k127_2251948_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 409.0
DYD1_k127_2251948_1 PFAM Ion transport protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001909 267.0
DYD1_k127_2253844_0 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000008145 248.0
DYD1_k127_2253844_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.0000000000000000000000000000000001985 133.0
DYD1_k127_2256864_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 434.0
DYD1_k127_2256864_1 PTS system, IIa K02806 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000882 304.0
DYD1_k127_2256864_2 radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 292.0
DYD1_k127_2256864_3 dUTPase K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000007157 178.0
DYD1_k127_2256864_4 PTS system, IIa K02806 - - 0.00000000000000000000000000000000000000000000006363 173.0
DYD1_k127_2256864_5 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.00000000000000000000000139 111.0
DYD1_k127_2256864_6 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000009972 85.0
DYD1_k127_2261604_0 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000003511 145.0
DYD1_k127_2278283_0 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 454.0
DYD1_k127_2278283_1 protein methyltransferase activity K11434,K20421 - 2.1.1.303,2.1.1.319 0.0000000000001028 83.0
DYD1_k127_229381_0 dioxygenase activity K10674,K21195 - 1.14.11.46,1.14.11.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009377 353.0
DYD1_k127_229381_1 PFAM Phenylalanine and histidine ammonia-lyase K01745 - 4.3.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000009445 280.0
DYD1_k127_229381_2 ADP-L-glycero-beta-D-manno-heptose biosynthetic process K00980 - 2.7.7.39 0.00000000000000000000000000000000000000000002328 166.0
DYD1_k127_229381_3 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02849 - - 0.0000000000000000000000000000000000000004386 161.0
DYD1_k127_229381_4 positive regulation of hh target transcription factor activity K06228 GO:0000003,GO:0000166,GO:0000278,GO:0000280,GO:0000281,GO:0000910,GO:0000911,GO:0001101,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005856,GO:0005874,GO:0005881,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006935,GO:0006996,GO:0007049,GO:0007112,GO:0007140,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007224,GO:0007227,GO:0007228,GO:0007275,GO:0007276,GO:0007349,GO:0007584,GO:0008064,GO:0008092,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008589,GO:0009524,GO:0009553,GO:0009558,GO:0009561,GO:0009605,GO:0009653,GO:0009791,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010639,GO:0010646,GO:0010647,GO:0014070,GO:0015630,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019219,GO:0019222,GO:0019538,GO:0019894,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030010,GO:0030030,GO:0030031,GO:0030554,GO:0030832,GO:0030833,GO:0030837,GO:0031156,GO:0031272,GO:0031323,GO:0031326,GO:0031333,GO:0031344,GO:0031667,GO:0032101,GO:0032104,GO:0032107,GO:0032271,GO:0032272,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032956,GO:0032970,GO:0033043,GO:0033206,GO:0033273,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0040011,GO:0042221,GO:0042330,GO:0042493,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043326,GO:0043327,GO:0043412,GO:0043900,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044782,GO:0045880,GO:0048229,GO:0048232,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048609,GO:0048646,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051090,GO:0051091,GO:0051128,GO:0051129,GO:0051171,GO:0051252,GO:0051301,GO:0051321,GO:0051493,GO:0051494,GO:0051593,GO:0051704,GO:0051716,GO:0060176,GO:0060255,GO:0060271,GO:0060491,GO:0061640,GO:0065007,GO:0065008,GO:0065009,GO:0070925,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0097159,GO:0097367,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0110053,GO:0120031,GO:0120032,GO:0120035,GO:0120036,GO:0140013,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901698,GO:1901700,GO:1902410,GO:1902903,GO:1902904,GO:1903046,GO:1903047,GO:1903506,GO:2000112,GO:2001141 2.7.11.1 0.000009445 58.0
DYD1_k127_229381_5 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0008714 46.0
DYD1_k127_2295066_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.198e-234 748.0
DYD1_k127_2295066_1 Peptidase M16C associated K06972 - - 3.299e-227 730.0
DYD1_k127_2295066_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006293 529.0
DYD1_k127_2295066_3 Trypsin K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 435.0
DYD1_k127_2295066_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844 419.0
DYD1_k127_2295066_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 300.0
DYD1_k127_2295066_6 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000007705 181.0
DYD1_k127_2295066_7 Glycosyltransferase family 92 - - - 0.000000000000000000000000000001275 132.0
DYD1_k127_2295066_8 - - - - 0.000000000000000000000000002065 121.0
DYD1_k127_2295066_9 Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 GO:0000166,GO:0003674,GO:0003824,GO:0003855,GO:0004764,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25,4.2.1.10 0.000000000000000003612 88.0
DYD1_k127_2332209_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1323.0
DYD1_k127_2332209_1 glycosyl transferase family 8 - - - 0.000000000000000000000000000000000000000000000000002747 190.0
DYD1_k127_2332209_2 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 0.0000000000000000000000000000000000000000000001748 175.0
DYD1_k127_2332209_3 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase - - - 0.00000000000000000000000000000000003084 140.0
DYD1_k127_2332209_4 - - - - 0.000000000006737 72.0
DYD1_k127_2332209_5 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000002785 61.0
DYD1_k127_2332209_6 COG0500 SAM-dependent methyltransferases - - - 0.0003083 51.0
DYD1_k127_2333478_0 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 301.0
DYD1_k127_2333478_1 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000000001603 231.0
DYD1_k127_2333478_2 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000504 227.0
DYD1_k127_2333478_3 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000001837 183.0
DYD1_k127_2333478_4 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000001324 156.0
DYD1_k127_2339217_0 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 342.0
DYD1_k127_2339217_1 cell wall glycoprotein biosynthetic process K01809 - 5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000001545 246.0
DYD1_k127_2339217_2 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000001496 214.0
DYD1_k127_2339217_3 KDEL motif-containing protein 2 - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016740,GO:0016757,GO:0016758,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044255,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046527,GO:0070013,GO:0071704,GO:1901135,GO:1903509 - 0.0000000000000000000000000000000001267 147.0
DYD1_k127_2339217_4 - - - - 0.000000000000000000000000000000007132 138.0
DYD1_k127_2344599_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 291.0
DYD1_k127_2344599_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573,K03183,K07003 - 2.1.1.163,2.1.1.201,2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000004862 250.0
DYD1_k127_2344599_2 RmlD substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002552 226.0
DYD1_k127_2344599_3 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000001147 185.0
DYD1_k127_2344599_4 HpcH/HpaI aldolase/citrate lyase family - - - 0.00000000000000000000000000000000000000000000005081 180.0
DYD1_k127_2344599_5 Glycosyltransferase like family 2 - - - 0.0000000000001437 82.0
DYD1_k127_2359421_0 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573,K03183,K07003 - 2.1.1.163,2.1.1.201,2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000182 256.0
DYD1_k127_2359421_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.000000000000000000000000000000000000000000000000000000000000007356 218.0
DYD1_k127_2359421_2 Glycosyltransferase family 17 - - - 0.0000000000000000000000000000000000000005966 159.0
DYD1_k127_2359421_3 TIGRFAM dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.000000003243 63.0
DYD1_k127_2359421_4 dTDP-4-dehydrorhamnose reductase activity K00067 - 1.1.1.133 0.00000005049 61.0
DYD1_k127_2406502_0 GGDEF domain K01584,K01585,K20955 - 2.7.7.65,4.1.1.19 3.915e-253 801.0
DYD1_k127_2406502_1 Amino acid permease K20265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008023 511.0
DYD1_k127_2406502_2 TrkA-C domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 310.0
DYD1_k127_2406502_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001182 259.0
DYD1_k127_2406502_5 Macrocin-O-methyltransferase (TylF) - - - 0.00000000000000000000000000000006634 134.0
DYD1_k127_2406502_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386,K20011 - 1.11.1.15 0.000001013 52.0
DYD1_k127_2406502_7 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00001569 47.0
DYD1_k127_2418405_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1119.0
DYD1_k127_2418405_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001856 250.0
DYD1_k127_2418405_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000007846 217.0
DYD1_k127_2418405_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000004952 203.0
DYD1_k127_2418405_4 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000000000000000000000000043 179.0
DYD1_k127_2517661_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1273.0
DYD1_k127_2517661_1 Putative Na+/H+ antiporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001147 282.0
DYD1_k127_2517661_2 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K00657,K07023 - 2.3.1.57 0.0000000000000000000000006691 110.0
DYD1_k127_2517661_3 - - - - 0.000000000006771 73.0
DYD1_k127_2517661_4 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000002586 66.0
DYD1_k127_2559008_0 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 445.0
DYD1_k127_2559008_1 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001967 275.0
DYD1_k127_2559008_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000001977 210.0
DYD1_k127_2559008_3 OsmC-like protein - - - 0.000000000000000000000000000000000008266 140.0
DYD1_k127_2559008_4 dna polymerase III delta subunit K02340 - 2.7.7.7 0.0000000000000000000005629 107.0
DYD1_k127_2559008_5 - - - - 0.000000000004222 74.0
DYD1_k127_2572597_0 Rhs family - - - 0.0000000000000000000000000001378 132.0
DYD1_k127_2572597_1 - - - - 0.00000000000000001368 86.0
DYD1_k127_2572886_0 Belongs to the SEDS family K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 450.0
DYD1_k127_2572886_1 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000001671 208.0
DYD1_k127_2572886_2 - - - - 0.00000000000000000000000000000000000003345 148.0
DYD1_k127_2572886_3 Gram-negative-bacterium-type cell outer membrane assembly - - - 0.000000002223 60.0
DYD1_k127_2572886_4 Major facilitator superfamily - - - 0.000000008862 67.0
DYD1_k127_2598136_0 SpoU rRNA Methylase family - - - 0.000000000000000000000000000000000000000000000000000000001229 206.0
DYD1_k127_2598136_1 adenylate kinase activity - - - 0.000000000000000000000000000000000005839 142.0
DYD1_k127_2632736_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 476.0
DYD1_k127_2632736_1 Major Facilitator Superfamily K05939 - 2.3.1.40,6.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 424.0
DYD1_k127_2632736_2 Exodeoxyribonuclease V, gamma subunit K03583 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004019 299.0
DYD1_k127_2632736_3 Glycosyltransferase family 92 - - - 0.0000000000000000000000000000000000000000000000000000000000000002565 231.0
DYD1_k127_2638855_0 Major Facilitator Superfamily - - - 0.0006244 52.0
DYD1_k127_2662045_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 6.524e-234 739.0
DYD1_k127_2662045_1 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000006947 131.0
DYD1_k127_2662045_2 rRNA processing K09140 - - 0.0000000000000000000000008672 105.0
DYD1_k127_2662045_3 Ribosomal protein L36 K02919 - - 0.0000000000001318 71.0
DYD1_k127_2662045_4 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000004617 76.0
DYD1_k127_2662045_5 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000002117 61.0
DYD1_k127_2662045_6 motor activity K10357,K21868 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0015629,GO:0016459,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0042623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464 - 0.00004945 50.0
DYD1_k127_2725487_0 Amino acid kinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000006957 268.0
DYD1_k127_2725487_1 transmembrane transport - - - 0.000000000000000000000000000000000000000005498 162.0
DYD1_k127_2725487_2 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 GO:0005575,GO:0005576,GO:0018995,GO:0020003,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0065010 - 0.0000000000000000000000000000007836 125.0
DYD1_k127_275139_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 432.0
DYD1_k127_275139_1 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 335.0
DYD1_k127_275139_2 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005739 246.0
DYD1_k127_275139_3 Major Facilitator Superfamily - - - 0.00000000000000000000000000000001309 131.0
DYD1_k127_2751919_0 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 357.0
DYD1_k127_2751919_1 Permease family K06901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002716 288.0
DYD1_k127_2751919_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000009361 230.0
DYD1_k127_2751919_3 Phosphate transporter family K03306 GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661 - 0.000000000000000004824 86.0
DYD1_k127_2751919_5 - - - - 0.0000000000001046 78.0
DYD1_k127_2751919_6 - - - - 0.0000002048 57.0
DYD1_k127_2776214_0 dehydrogenase e1 component K00164 - 1.2.4.2 1.095e-293 926.0
DYD1_k127_2776214_1 Dihydrolipoyl dehydrogenase. Source PGD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009393 460.0
DYD1_k127_2776214_2 2-oxoglutarate dehydrogenase K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 404.0
DYD1_k127_2776214_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 366.0
DYD1_k127_2776214_4 Domain of unknown function (DUF1858) - - - 0.0000000000000000000000000000000000000000000000000000000000563 207.0
DYD1_k127_2776214_5 - - - - 0.0000000000000000000000000000000000000000000000002656 179.0
DYD1_k127_2776214_6 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000003157 180.0
DYD1_k127_2813579_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 467.0
DYD1_k127_2813579_1 chaperone protein htpG K04079 - - 0.0000000000000000000000000000000000000000002989 164.0
DYD1_k127_2813579_2 The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF- YajC-YidC subcomplex facilitates these functions K03210 - - 0.0000000000000000000000000000000006374 133.0
DYD1_k127_2813579_3 In elementary bodies (EBs, the infectious stage, which is able to survive outside the host cell) provides the structural integrity of the outer envelope through disulfide cross-links with the small cysteine-rich protein and the large cysteine-rich periplasmic protein. It has been described in publications as the Sarkosyl-insoluble COMC (Chlamydia outer membrane complex), and serves as the functional equivalent of peptidoglycan K03162 GO:0005575,GO:0005576,GO:0005623,GO:0009986,GO:0018995,GO:0020003,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044464,GO:0065010 - 0.000000000000000003827 94.0
DYD1_k127_2813579_4 Histone H1-like protein Hc1 - - - 0.0000000007394 63.0
DYD1_k127_2837846_0 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 473.0
DYD1_k127_2837846_1 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 459.0
DYD1_k127_2837846_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002953 274.0
DYD1_k127_2837846_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000000003879 177.0
DYD1_k127_2845453_0 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 534.0
DYD1_k127_2845453_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008945 342.0
DYD1_k127_2845453_2 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000584 186.0
DYD1_k127_2845453_3 Glycosyl transferase family 2 - - - 0.000000000000000007452 84.0
DYD1_k127_2845453_4 calmodulin-dependent protein kinase activity - - - 0.000000000000007367 87.0
DYD1_k127_285813_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 312.0
DYD1_k127_285813_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease - - - 0.00000000000000000000000000000000005967 135.0
DYD1_k127_285813_2 - - - - 0.0000000000000009243 79.0
DYD1_k127_285813_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease - - - 0.00000003138 66.0
DYD1_k127_2871027_0 Amino acid permease K20265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 459.0
DYD1_k127_2871027_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016874,GO:0016886,GO:0030312,GO:0033554,GO:0034641,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.0000002342 62.0
DYD1_k127_2890221_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002322 282.0
DYD1_k127_2890221_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000022 73.0
DYD1_k127_2890221_2 - - - - 0.00000565 57.0
DYD1_k127_2890221_3 Glycosyl transferase family 2 - - - 0.0001517 53.0
DYD1_k127_2900868_0 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 440.0
DYD1_k127_2900868_1 conserved protein related to MYG1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008317 379.0
DYD1_k127_2900868_2 lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000005169 235.0
DYD1_k127_2900868_3 Raf kinase inhibitor-like protein, YbhB YbcL family K06910 - - 0.00000000000000000000000000000000000000000000000000000000001402 209.0
DYD1_k127_2900868_4 catalytic activity - - - 0.000000000000000000000000000000000000000000002931 166.0
DYD1_k127_2951463_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 475.0
DYD1_k127_2951463_1 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.000000000000000000000000006894 117.0
DYD1_k127_2960215_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 482.0
DYD1_k127_2960215_1 Catalyzes the methylthiolation of N6- threonylcarbamoyladenosine (t(6)A), leading to the formation of 2- methylthio-N6-threonylcarbamoyladenosine (ms(2)t(6)A) at position 37 in tRNAs that read codons beginning with adenine K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008929 441.0
DYD1_k127_2960215_2 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000007411 265.0
DYD1_k127_2960215_3 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003316 266.0
DYD1_k127_2960215_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000003214 235.0
DYD1_k127_2960215_5 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000006908 202.0
DYD1_k127_2960215_6 Oxidoreductase - - - 0.00000000000000000000000000000000000001246 155.0
DYD1_k127_30387_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000008902 169.0
DYD1_k127_30387_1 Sulfotransferase domain - - - 0.00000000000000000000000000007962 127.0
DYD1_k127_30387_2 Sulfotransferase domain - - - 0.000000000000000000000116 100.0
DYD1_k127_3040829_0 Sulfate transporter family K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 359.0
DYD1_k127_3040829_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000005919 203.0
DYD1_k127_3040829_2 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000000000000000000000000000000003703 140.0
DYD1_k127_3040829_3 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000000000000000000000000000006958 126.0
DYD1_k127_3040829_4 redox protein regulator of disulfide bond formation - - - 0.00000000000000000000000007464 112.0
DYD1_k127_3045932_0 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 432.0
DYD1_k127_3045932_1 RmlD substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 406.0
DYD1_k127_3045932_2 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 317.0
DYD1_k127_3045932_3 Heavy metal translocating P-type atpase K01534,K01784,K10817,K12443,K15672 - 2.3.1.94,3.6.3.3,3.6.3.5,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 318.0
DYD1_k127_3045932_4 - - - - 0.0000000001722 64.0
DYD1_k127_3045932_5 nuclear chromosome segregation - - - 0.0000000797 65.0
DYD1_k127_3071159_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 2.151e-264 831.0
DYD1_k127_3071159_1 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000002003 223.0
DYD1_k127_3071159_2 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.000000000000000000000000000000000000000223 151.0
DYD1_k127_3071159_3 tigr00255 - - - 0.000000000000000000000000003499 112.0
DYD1_k127_3090683_0 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 397.0
DYD1_k127_3090683_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 364.0
DYD1_k127_3090683_2 ADP-heptose-lipopolysaccharide heptosyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005394 273.0
DYD1_k127_3090683_3 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000001195 220.0
DYD1_k127_3090683_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000001463 203.0
DYD1_k127_3090683_5 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000002251 195.0
DYD1_k127_3090683_6 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000003255 134.0
DYD1_k127_3090683_7 UDP-N-acetylglucosamine pyrophosphorylase K00972 - 2.7.7.23,2.7.7.83 0.000000000000000000000000000000007717 145.0
DYD1_k127_3090683_8 PFAM Collagen triple helix repeat - - - 0.00000004345 61.0
DYD1_k127_31018_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K09181 - - 0.0 1035.0
DYD1_k127_31018_1 RDD family - - - 0.000000000000000000000003519 111.0
DYD1_k127_3108558_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 1.151e-201 641.0
DYD1_k127_3108558_1 Na H antiporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 454.0
DYD1_k127_3108558_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 363.0
DYD1_k127_3108558_3 Cytochrome c oxidase subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000005094 236.0
DYD1_k127_3108558_4 Belongs to the heme-copper respiratory oxidase family K02298 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009060,GO:0009319,GO:0009486,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015453,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016491,GO:0019646,GO:0020037,GO:0022804,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0043167,GO:0043169,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0048038,GO:0048039,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901363,GO:1902494,GO:1902600 1.10.3.10 0.00000000000000000000000000000000000003707 145.0
DYD1_k127_3108558_5 Prokaryotic Cytochrome C oxidase subunit IV K02300 - - 0.000000000000000000000000000001136 124.0
DYD1_k127_3108558_6 positive regulation of oligodendrocyte differentiation K18032 - 3.1.3.48 0.00000000000000000000000000001638 131.0
DYD1_k127_3108558_7 outer membrane autotransporter barrel domain protein - - - 0.0000000000000000000000339 113.0
DYD1_k127_3125563_0 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001576 271.0
DYD1_k127_3125563_1 - - - - 0.00000000000000000000000000000000000001142 156.0
DYD1_k127_3125563_2 - - - - 0.000000000000000000000000000000000001391 145.0
DYD1_k127_3125563_3 Yip1 domain - - - 0.0000000000000000000000000001138 124.0
DYD1_k127_3125563_4 Yip1 domain - - - 0.000000000002035 75.0
DYD1_k127_3125563_5 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000004852 53.0
DYD1_k127_3140582_0 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 495.0
DYD1_k127_3140582_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000002221 215.0
DYD1_k127_3140582_2 Peptidyl-prolyl cis-trans K01802 - 5.2.1.8 0.00000000000000436 79.0
DYD1_k127_314671_0 Elongation factor G C-terminus K06207 - - 2.008e-281 875.0
DYD1_k127_314671_1 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 527.0
DYD1_k127_3147250_0 ABC transporter transmembrane region K06147 GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009507,GO:0009526,GO:0009536,GO:0009555,GO:0009657,GO:0009658,GO:0009889,GO:0009941,GO:0009987,GO:0010035,GO:0010038,GO:0010288,GO:0010380,GO:0016020,GO:0016043,GO:0018130,GO:0019222,GO:0019538,GO:0019637,GO:0019720,GO:0019725,GO:0019866,GO:0022622,GO:0030003,GO:0031090,GO:0031323,GO:0031326,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0042221,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046686,GO:0046916,GO:0048229,GO:0048364,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050790,GO:0050794,GO:0050801,GO:0050896,GO:0051171,GO:0051186,GO:0051188,GO:0051189,GO:0051193,GO:0051276,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0065009,GO:0071704,GO:0071840,GO:0090056,GO:0090407,GO:0098771,GO:0099402,GO:1901360,GO:1901362,GO:1901401,GO:1901463,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 487.0
DYD1_k127_3147250_1 adenylate kinase activity K00939 - 2.7.4.3 0.00000000000000000000000003667 118.0
DYD1_k127_3147250_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000003266 111.0
DYD1_k127_3147250_3 Aminotransferase class-III K00836 - 2.6.1.76 0.00000000000000000001197 106.0
DYD1_k127_3147250_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.00000000000000000002368 108.0
DYD1_k127_3147250_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 0.000000000000000001131 102.0
DYD1_k127_3168045_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007083 325.0
DYD1_k127_3168045_2 PFAM Filamentation induced by cAMP death on curing-related K07341 - - 0.0000000000000000000000003463 109.0
DYD1_k127_3183414_0 FtsX-like permease family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 395.0
DYD1_k127_3183414_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 359.0
DYD1_k127_3183414_2 system ATP-binding protein LolD K09810 - - 0.0000000000000000000000000000000000000000000000000001408 190.0
DYD1_k127_3183414_3 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000005056 85.0
DYD1_k127_3183414_4 Bacterial membrane protein YfhO - - - 0.00005674 51.0
DYD1_k127_3189042_0 PAS domain K07710 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 334.0
DYD1_k127_3189042_1 Peptidase M15 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002095 265.0
DYD1_k127_3189042_2 - - - - 0.0000000000000000000000000000000000000000000000006692 191.0
DYD1_k127_3189042_3 - - - - 0.0002964 44.0
DYD1_k127_3215646_0 adenylate kinase K00939 - 2.7.4.3 0.0000000000000000000000000000000000002706 143.0
DYD1_k127_3215646_1 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000006976 134.0
DYD1_k127_3215646_2 Domain of unknown function (DUF1858) - - - 0.000003043 49.0
DYD1_k127_322463_0 N-terminal domain of ribose phosphate pyrophosphokinase K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 326.0
DYD1_k127_322463_1 GDP-mannose mannosyl hydrolase activity K03574 - 3.6.1.55 0.00000000001131 66.0
DYD1_k127_3294434_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 448.0
DYD1_k127_3294434_1 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000001189 221.0
DYD1_k127_3294434_2 transport system membrane protein K11709 - - 0.0000000000000000000000000000000000000000000000000000000000004856 221.0
DYD1_k127_3302983_0 Branched-chain amino acid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 418.0
DYD1_k127_3302983_1 thiolester hydrolase activity K06889 - - 0.0000000000000000000000000000000000000000000000000000000000002886 221.0
DYD1_k127_3302983_2 Putative cyclase K07130 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000001529 211.0
DYD1_k127_3302983_3 Platelet-activating factor acetylhydrolase, isoform II - - - 0.0000000000000000000000000000000000000000000000000004013 198.0
DYD1_k127_3302983_4 Beta-lactamase - - - 0.00000000000000000000000000000000000000003306 158.0
DYD1_k127_3302983_5 SEC-C motif K09858 - - 0.0000000000000000000000000000000006199 135.0
DYD1_k127_3302983_6 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000004352 98.0
DYD1_k127_3302983_7 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.000000000000000000228 97.0
DYD1_k127_330937_0 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 501.0
DYD1_k127_330937_1 lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 444.0
DYD1_k127_330937_2 septum formation protein Maf K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.0000000000000000000000000000000000000005636 155.0
DYD1_k127_330937_3 Glucose dehydrogenase C-terminus - - - 0.0000000000000000000000000004069 116.0
DYD1_k127_3314896_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 394.0
DYD1_k127_3332231_0 swi snf helicase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005567 385.0
DYD1_k127_3332231_1 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001489 251.0
DYD1_k127_3332231_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.00000000000000000000000000000000000008396 147.0
DYD1_k127_3332231_3 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.00000000000000000000000001379 114.0
DYD1_k127_335236_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity K03695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003441 451.0
DYD1_k127_335236_1 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 381.0
DYD1_k127_335236_2 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 383.0
DYD1_k127_335236_3 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000003076 159.0
DYD1_k127_335236_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000002438 74.0
DYD1_k127_335236_6 ATP-dependent DNA helicase K15710 GO:0000228,GO:0000724,GO:0000725,GO:0000726,GO:0000785,GO:0000790,GO:0003674,GO:0003824,GO:0004386,GO:0004842,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006310,GO:0006464,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016462,GO:0016567,GO:0016740,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0019787,GO:0031974,GO:0031981,GO:0032446,GO:0033554,GO:0034641,GO:0036211,GO:0042623,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045003,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0061630,GO:0061659,GO:0070013,GO:0070647,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.2.27 0.000006107 54.0
DYD1_k127_3372838_0 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 386.0
DYD1_k127_3372838_1 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000000000000000000000000000000003933 192.0
DYD1_k127_3372838_2 Belongs to the glycosyl hydrolase 1 family K05350 - 3.2.1.21 0.0000000000000000000000000000000000000002775 165.0
DYD1_k127_3372838_3 Endonuclease/Exonuclease/phosphatase family K01114,K01117 - 3.1.4.12,3.1.4.3 0.000002734 59.0
DYD1_k127_3379883_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009314 534.0
DYD1_k127_3379883_1 Belongs to the TtcA family - - - 0.0000000000000000000000000000000000000000000000000000000000006779 213.0
DYD1_k127_3391419_0 outer membrane autotransporter barrel domain protein - - - 0.000000000000000000000000000000000004447 151.0
DYD1_k127_3391419_1 outer membrane autotransporter barrel domain protein - - - 0.000000000000000000000000003286 124.0
DYD1_k127_3391419_2 cell adhesion K02024 - - 0.000000000000005213 85.0
DYD1_k127_3399670_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 511.0
DYD1_k127_3399670_1 Transcriptional Regulatory Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 327.0
DYD1_k127_3399670_2 insulinase family K01408 - 3.4.24.56 0.00000000000000000000000000000000000000000000000001804 187.0
DYD1_k127_3399670_3 FR47-like protein K03825 - - 0.00000000000000000000000000000000000000000000000007372 182.0
DYD1_k127_3399670_4 Acetyltransferase (GNAT) domain K03825 - - 0.00000000000000000000000000000000000000000000007892 173.0
DYD1_k127_3399670_5 nucleotide metabolic process - - - 0.0000000000000000000000000000001205 132.0
DYD1_k127_3407197_0 SNF2 family - - - 1.525e-229 731.0
DYD1_k127_3407197_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000001129 89.0
DYD1_k127_3413011_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006848 563.0
DYD1_k127_3413011_1 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000001749 198.0
DYD1_k127_3413011_2 DNA-7-methyladenine glycosylase activity - - - 0.000000000000000000000000000000000000000000000000000002961 196.0
DYD1_k127_3413011_3 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000006963 147.0
DYD1_k127_3413011_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000186 128.0
DYD1_k127_3413011_5 - - - - 0.000000000000000000002938 94.0
DYD1_k127_3413011_6 Domain protein - - - 0.00000000000000001316 91.0
DYD1_k127_3413011_7 DNA polymerase III chi subunit, HolC K02339 - 2.7.7.7 0.0000000000000000173 87.0
DYD1_k127_3413011_8 - - - - 0.000000004474 59.0
DYD1_k127_3441_0 Together with the serine threonine kinase Pkn1, may play a role in the specific interactions with host proteins during intracellular growth K08884,K12132 - 2.7.11.1 2.33e-245 782.0
DYD1_k127_3453147_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 316.0
DYD1_k127_3453147_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 295.0
DYD1_k127_3454794_0 Aminoacyl-tRNA editing domain K09759 - 6.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 453.0
DYD1_k127_3454794_1 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000008352 180.0
DYD1_k127_3455784_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 5.452e-216 683.0
DYD1_k127_3455784_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 353.0
DYD1_k127_3455784_2 Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 GO:0000166,GO:0003674,GO:0003824,GO:0003855,GO:0004764,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25,4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000009913 235.0
DYD1_k127_3455784_3 - - - - 0.00001554 50.0
DYD1_k127_3557741_0 Major facilitator K03762 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001078 263.0
DYD1_k127_3557741_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000008399 164.0
DYD1_k127_3557741_2 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000002296 113.0
DYD1_k127_3561072_0 protein secretion - - - 0.0000000000000000000000007243 120.0
DYD1_k127_3561072_1 Inverse autotransporter, beta-domain - - - 0.0000000000000000000006319 107.0
DYD1_k127_3561072_2 - - - - 0.00000000000004208 86.0
DYD1_k127_3561072_3 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.0000000001019 75.0
DYD1_k127_3561711_0 ribonuclease G K08301 - - 1.029e-242 758.0
DYD1_k127_3561711_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 347.0
DYD1_k127_3561711_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 293.0
DYD1_k127_3561711_3 peptidase K06889 - - 0.0000000000000000000000000000000000000000000000000000000000111 215.0
DYD1_k127_3561711_4 metal-binding, possibly nucleic acid-binding protein - - - 0.000000000000000000000000000000001268 134.0
DYD1_k127_3561711_5 Acyltransferase K00630 - 2.3.1.15 0.00000000000000000000000006387 112.0
DYD1_k127_3567402_0 Pyruvate dehydrogenase E1 K00162,K21417 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 454.0
DYD1_k127_3567402_1 Dehydrogenase E1 component K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 329.0
DYD1_k127_3567402_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000001568 149.0
DYD1_k127_358812_0 phosphoprotein phosphatase activity K07313 - 3.1.3.16 0.000000000000000002379 94.0
DYD1_k127_358812_1 N-4 methylation of cytosine K07319 - 2.1.1.72 0.00000000000009827 78.0
DYD1_k127_3609141_0 penicillin-binding protein K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 421.0
DYD1_k127_3609141_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001618 280.0
DYD1_k127_3609141_2 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000003611 198.0
DYD1_k127_3641288_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 6.059e-204 644.0
DYD1_k127_3641288_1 ATP-dependent Clp protease ATP-binding subunit K03696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004157 259.0
DYD1_k127_3641288_2 Biotin/lipoate A/B protein ligase family K03800 - 6.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000002704 233.0
DYD1_k127_3641545_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase (By similarity) K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 379.0
DYD1_k127_3641545_1 D-alanyl-D-alanine carboxypeptidase K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009599 317.0
DYD1_k127_3641545_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000782 235.0
DYD1_k127_3641545_3 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000006317 231.0
DYD1_k127_3641545_4 - - - - 0.000000000000000000000000000000000002696 142.0
DYD1_k127_3641545_5 Histidine kinase-like ATPase domain - - - 0.00000000000000003433 86.0
DYD1_k127_3641545_6 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.000002986 50.0
DYD1_k127_3696311_0 -O-antigen K02847 - - 0.0000000000000000000000000000000000000001356 168.0
DYD1_k127_3696311_1 Inverse autotransporter, beta-domain - - - 0.00000000000000000003725 104.0
DYD1_k127_3696311_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000003475 90.0
DYD1_k127_371117_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.373e-294 910.0
DYD1_k127_371117_1 Aminotransferase class I and II K00813,K00832 GO:0003674,GO:0003824,GO:0004069,GO:0004838,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006558,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0033585,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0070279,GO:0070547,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 2.6.1.1,2.6.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 351.0
DYD1_k127_371117_2 succinylglutamate desuccinylase aspartoacylase K06987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008471 312.0
DYD1_k127_371117_3 rod shape-determining protein MreC - - - 0.00000000000000000000000000000000000000000000000000000000000000000001497 245.0
DYD1_k127_371117_4 Competence protein CoiA-like family K06198 - - 0.0000000000000000000000000000000000000004642 159.0
DYD1_k127_371117_5 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase - - - 0.000000000000000000000000000000000000002371 156.0
DYD1_k127_371117_6 transmembrane transporter activity - - - 0.000000000000000000000000000000000002339 141.0
DYD1_k127_371117_7 rRNA binding K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000003108 58.0
DYD1_k127_371117_8 - - - - 0.00004623 51.0
DYD1_k127_3787443_0 Glutamate-1-semialdehyde K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 489.0
DYD1_k127_3787443_1 Surface antigen K07278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 354.0
DYD1_k127_3787443_2 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 323.0
DYD1_k127_3787443_3 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000039 210.0
DYD1_k127_3787443_4 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000005396 149.0
DYD1_k127_3787443_5 - - - - 0.000000000000000000000000002254 118.0
DYD1_k127_3787443_6 ABC transporter K02065 - - 0.000000000000000000000000005082 113.0
DYD1_k127_3787443_7 Type III secretion - - - 0.0000000000000000001225 94.0
DYD1_k127_3787443_8 Flagellar biosynthesis protein, FliO K02418 - - 0.000000000006902 70.0
DYD1_k127_3844072_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 1.427e-253 795.0
DYD1_k127_3844072_1 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 5.728e-214 694.0
DYD1_k127_3844072_2 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.000002103 59.0
DYD1_k127_3854876_0 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000068 177.0
DYD1_k127_3854876_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000001415 119.0
DYD1_k127_3854876_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000001005 113.0
DYD1_k127_3868204_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007348 332.0
DYD1_k127_3868204_1 protoporphyrinogen oxidase activity K00231 - 1.3.3.15,1.3.3.4 0.00001161 56.0
DYD1_k127_3873312_0 E1-E2 ATPase K01534 - 3.6.3.3,3.6.3.5 3.908e-220 699.0
DYD1_k127_3873312_1 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001617 260.0
DYD1_k127_3873312_2 Aminopeptidase I zinc metalloprotease (M18) K01267 - 3.4.11.21 0.000000000000000000000000000000000000000000000000000000000000000001305 236.0
DYD1_k127_3873312_3 Aminopeptidase I zinc metalloprotease (M18) K01267 - 3.4.11.21 0.000000000000000000000000000000000816 135.0
DYD1_k127_3880527_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 319.0
DYD1_k127_3880527_1 ABC transporter - - - 0.0000000000000000000000000000000000000000000024 168.0
DYD1_k127_3880527_2 Thioredoxin K03671 - - 0.0000000000000000000001361 107.0
DYD1_k127_3880527_3 - K13409 - - 0.0000000000000003503 88.0
DYD1_k127_391513_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1121.0
DYD1_k127_392783_0 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000001234 200.0
DYD1_k127_392783_1 cyclopropane-fatty-acyl-phospholipid synthase - - - 0.0000000000000000000000000000000002291 138.0
DYD1_k127_392783_2 cheY-homologous receiver domain - - - 0.0000000000000000000000000002356 116.0
DYD1_k127_392783_3 glucosyltransferase activity - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016740,GO:0016757,GO:0016758,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044255,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046527,GO:0070013,GO:0071704,GO:1901135,GO:1903509 - 0.000000000000000000000000304 120.0
DYD1_k127_392783_4 peptidyl-tyrosine sulfation K04771,K18546 - 3.4.21.107 0.000000001773 70.0
DYD1_k127_392783_5 Alpha/beta hydrolase family - - - 0.0002033 46.0
DYD1_k127_3937406_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 2.743e-298 927.0
DYD1_k127_3937406_1 Cellulose biosynthesis protein BcsQ K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 384.0
DYD1_k127_395055_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 1.358e-198 624.0
DYD1_k127_3967229_0 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 297.0
DYD1_k127_3967229_1 Mycolic acid cyclopropane synthetase K05928 - 2.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000002145 259.0
DYD1_k127_3967229_2 DNA helicase K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000001627 186.0
DYD1_k127_3967229_3 Protein of unknown function (DUF1328) - - - 0.0000001271 55.0
DYD1_k127_3976944_0 Serine/Threonine protein kinases, catalytic domain K08286 GO:0000166,GO:0000749,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005886,GO:0005937,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0010033,GO:0010876,GO:0015711,GO:0015748,GO:0015914,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019236,GO:0019538,GO:0023052,GO:0030427,GO:0030554,GO:0031136,GO:0031137,GO:0031139,GO:0032368,GO:0032370,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0033036,GO:0034204,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0042221,GO:0042995,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043270,GO:0043332,GO:0043412,GO:0043900,GO:0043902,GO:0044070,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044463,GO:0044464,GO:0045332,GO:0046777,GO:0046999,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051286,GO:0051716,GO:0061024,GO:0061091,GO:0061092,GO:0065007,GO:0065008,GO:0070887,GO:0071310,GO:0071444,GO:0071702,GO:0071704,GO:0071840,GO:0071944,GO:0097035,GO:0097159,GO:0097367,GO:0120025,GO:0120038,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1903793,GO:1905952,GO:1905954,GO:2000241,GO:2000243,GO:2001138,GO:2001140 - 0.0000000000000000000000000000219 129.0
DYD1_k127_3976944_1 - - - - 0.000215 44.0
DYD1_k127_3977063_0 - - - - 0.000215 44.0
DYD1_k127_4022364_0 succinate dehydrogenase K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 554.0
DYD1_k127_4022364_1 succinate dehydrogenase K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 357.0
DYD1_k127_4022364_2 Lipoate-protein ligase K03800 - 6.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000003414 259.0
DYD1_k127_4032896_0 phosphorelay sensor kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000005476 229.0
DYD1_k127_4032896_1 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000000000393 126.0
DYD1_k127_4035847_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000001693 182.0
DYD1_k127_4035847_2 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.00000000000000001729 94.0
DYD1_k127_4044973_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 606.0
DYD1_k127_4044973_1 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 385.0
DYD1_k127_4044973_2 Putative vitamin uptake transporter K09125 - - 0.00000000000000000000000000000000000000000000000000000002635 203.0
DYD1_k127_4044973_3 Domain of unknown function (DUF378) K09779 - - 0.00000001642 58.0
DYD1_k127_4046538_0 Sulfate transporter family K03321 - - 0.0000000000000000000000000000006155 123.0
DYD1_k127_4059354_0 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 370.0
DYD1_k127_4059354_1 MotA TolQ ExbB proton channel family protein K03562 - - 0.000000000000000000000000000000000001314 141.0
DYD1_k127_4059354_2 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000000000000000000008142 118.0
DYD1_k127_4059354_3 Belongs to the ompA family K03640 - - 0.0000000000000000000002214 103.0
DYD1_k127_4059354_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03646,K03832 - - 0.00000000001907 73.0
DYD1_k127_4109880_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002371 261.0
DYD1_k127_4112222_0 Acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000005642 197.0
DYD1_k127_4112222_1 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000002057 128.0
DYD1_k127_4112222_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000004207 64.0
DYD1_k127_4112222_3 Protein of unknown function (DUF2905) - - - 0.00006125 48.0
DYD1_k127_4132786_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1235.0
DYD1_k127_4132786_1 Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of three 3-deoxy-D-manno-octulosonate (Kdo) residues from CMP-Kdo to lipid IV(A), the tetraacyldisaccharide- 1,4'-bisphosphate precursor of lipid A. Thus generates the genus- specific LPS epitope of Chlamydia, composed of the trisaccharide alpha-Kdo-(2- 8)-alpha-Kdo-(2- 4)-alpha-Kdo K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005728 289.0
DYD1_k127_4132786_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000001303 77.0
DYD1_k127_4147420_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.893e-293 913.0
DYD1_k127_4147420_1 coproporphyrinogen oxidase activity K02495 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.98.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 388.0
DYD1_k127_4147420_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001539 286.0
DYD1_k127_4147420_3 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000009463 247.0
DYD1_k127_4147540_0 Protein of unknown function (DUF455) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007389 346.0
DYD1_k127_4147540_1 DNA recombination protein RmuC homolog K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 338.0
DYD1_k127_4147540_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 306.0
DYD1_k127_4147540_3 Bacterial SH3 domain homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000002598 230.0
DYD1_k127_4152091_0 Asparaginyl-tRNA synthetase K01893 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 557.0
DYD1_k127_4152091_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 338.0
DYD1_k127_4152091_2 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000008967 214.0
DYD1_k127_4152091_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000003975 221.0
DYD1_k127_4152091_4 Regulatory protein recX K03565 - - 0.0004557 49.0
DYD1_k127_4167676_0 - - - - 0.00000000000000000000000000261 117.0
DYD1_k127_4171152_0 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006008 366.0
DYD1_k127_4171152_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000852 336.0
DYD1_k127_4171152_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000008837 209.0
DYD1_k127_4171152_3 Lysin motif - - - 0.0000000000000000000000000000001705 132.0
DYD1_k127_4177517_0 TPM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 296.0
DYD1_k127_4177517_1 - - - - 0.00000000000000000000000000000000000000000000000000000000002382 210.0
DYD1_k127_4177517_2 - - - - 0.00000000000000000000001575 102.0
DYD1_k127_4181537_0 hemolysin activation secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000005358 254.0
DYD1_k127_4181537_1 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000002346 156.0
DYD1_k127_4181537_2 Flavin containing amine oxidoreductase K00574 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0008825,GO:0009987,GO:0016740,GO:0016741,GO:0030258,GO:0032259,GO:0044237,GO:0044238,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0071704 2.1.1.79 0.0000000000000000000000007883 118.0
DYD1_k127_4181537_3 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506,K21681 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 1.1.1.405,2.7.7.40,2.7.7.60,4.6.1.12 0.00000000000000006875 82.0
DYD1_k127_4246599_0 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 412.0
DYD1_k127_4246599_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000003334 243.0
DYD1_k127_4246599_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000004206 238.0
DYD1_k127_4246599_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000000000004334 196.0
DYD1_k127_4246599_4 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000004324 179.0
DYD1_k127_4246599_5 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000002181 167.0
DYD1_k127_4246599_6 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000006766 160.0
DYD1_k127_4246599_7 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000249 100.0
DYD1_k127_4246599_8 Belongs to the glycosyltransferase 1 family. Bacterial plant glycogen synthase subfamily K00703 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005982,GO:0006073,GO:0008150,GO:0008152,GO:0009011,GO:0009058,GO:0009059,GO:0009250,GO:0009507,GO:0009536,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0019252,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0071704,GO:1901576 2.4.1.21 0.00000000000002026 78.0
DYD1_k127_4269264_0 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001408 276.0
DYD1_k127_4269264_1 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000007198 217.0
DYD1_k127_4269264_2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000131 187.0
DYD1_k127_4269264_3 sulfuric ester hydrolase activity K07014 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000002596 105.0
DYD1_k127_4283804_0 RNA pseudouridylate synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000002186 248.0
DYD1_k127_4283804_1 RF-1 domain - - - 0.000000000000000000000000000000000000009163 148.0
DYD1_k127_4283804_2 DNA-binding protein with PD1-like DNA-binding motif K06934 - - 0.0000000000000000000000002481 111.0
DYD1_k127_4283804_3 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000004781 94.0
DYD1_k127_4283804_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000001542 72.0
DYD1_k127_4283804_5 protein, possibly involved in aromatic compounds catabolism - - - 0.0000000002913 61.0
DYD1_k127_4301066_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 610.0
DYD1_k127_4301066_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000003311 83.0
DYD1_k127_4301066_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0008989 42.0
DYD1_k127_4304905_0 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 456.0
DYD1_k127_4304905_1 Rhomboid family K02441 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005955 269.0
DYD1_k127_4304905_2 Cytidylyltransferase-like - - - 0.00000000000000000000000000007462 117.0
DYD1_k127_4331851_0 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 3.717e-195 614.0
DYD1_k127_4331851_1 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000001359 199.0
DYD1_k127_4331851_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928,K15792 - 6.3.2.10,6.3.2.13 0.000000000003674 69.0
DYD1_k127_4338007_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 445.0
DYD1_k127_4338007_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000002361 178.0
DYD1_k127_4338007_2 - - - - 0.000000000000000000000001464 111.0
DYD1_k127_4338007_3 - - - - 0.0003759 49.0
DYD1_k127_4342858_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1187.0
DYD1_k127_4342858_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.094e-279 881.0
DYD1_k127_4342858_2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006,K01007 - 2.7.9.1,2.7.9.2 1.463e-252 788.0
DYD1_k127_4342858_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 355.0
DYD1_k127_4342858_4 Protein of unknown function (DUF721) - - - 0.00000000000000000001232 95.0
DYD1_k127_4370384_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 553.0
DYD1_k127_4370384_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000795 458.0
DYD1_k127_4384498_0 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K12452,K13328 - 1.17.1.1,4.2.1.164 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 420.0
DYD1_k127_4384498_1 ADP-glyceromanno-heptose 6-epimerase activity K01709 - 4.2.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 391.0
DYD1_k127_4401788_0 HAL protein kinase - GO:0000122,GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005794,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006808,GO:0006873,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0009373,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0012505,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019216,GO:0019219,GO:0019222,GO:0019236,GO:0019538,GO:0019725,GO:0022898,GO:0023052,GO:0030100,GO:0030554,GO:0031135,GO:0031137,GO:0031138,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032409,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0034762,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043900,GO:0043901,GO:0044087,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045806,GO:0045892,GO:0045934,GO:0045996,GO:0046019,GO:0046020,GO:0046890,GO:0046999,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0055082,GO:0060255,GO:0060627,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071310,GO:0071444,GO:0071704,GO:0071944,GO:0080090,GO:0090153,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902679,GO:1903506,GO:1903507,GO:1905038,GO:2000112,GO:2000113,GO:2000241,GO:2000242,GO:2001141 - 0.000000002217 63.0
DYD1_k127_4404749_0 Type III secretion inner membrane protein SctV K03230 - - 2.38e-198 628.0
DYD1_k127_4404749_1 Type III secretion K03229 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 345.0
DYD1_k127_4404749_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000003438 78.0
DYD1_k127_4404749_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000009853 51.0
DYD1_k127_4421816_0 Acetolactate synthase K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003183 373.0
DYD1_k127_4421816_1 SIS domain K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001147 276.0
DYD1_k127_4421816_2 hydrolase, HAD-superfamily, subfamily IIIA K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000754 189.0
DYD1_k127_4421816_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000009793 48.0
DYD1_k127_4426972_0 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000007066 226.0
DYD1_k127_4426972_1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000001116 102.0
DYD1_k127_4426972_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000006302 78.0
DYD1_k127_4426972_3 COG0457 FOG TPR repeat - - - 0.00000001077 68.0
DYD1_k127_4464758_0 Belongs to the aldehyde dehydrogenase family K13821 - 1.2.1.88,1.5.5.2 7.006e-288 900.0
DYD1_k127_4464758_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 3.464e-246 771.0
DYD1_k127_4464758_2 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007245 536.0
DYD1_k127_4464758_3 Trk-type K transport systems, membrane components K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008774 482.0
DYD1_k127_4464758_4 Ribosomal protein L11 methyltransferase (PrmA) K02687 - - 0.000000000000000000000000000000000000000000000002284 182.0
DYD1_k127_4464758_5 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000004244 119.0
DYD1_k127_4464758_6 TrkA-N domain K03499 - - 0.000007211 52.0
DYD1_k127_4490555_0 The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of 3 enzymatic components branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity) K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 398.0
DYD1_k127_4490555_1 Putative Na+/H+ antiporter - - - 0.000000000000008676 75.0
DYD1_k127_4490555_2 - - - - 0.000000000001119 74.0
DYD1_k127_4513871_0 Sulfate permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006095 394.0
DYD1_k127_4516704_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K01784,K12450 - 4.2.1.46,4.2.1.76,5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000076 507.0
DYD1_k127_4516704_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002328 275.0
DYD1_k127_4516704_2 RmlD substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004217 236.0
DYD1_k127_4516704_3 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000000000000000000000000000002204 200.0
DYD1_k127_4535086_0 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000000000000000000000000000000000000000000000002286 183.0
DYD1_k127_4535086_1 Protein of unknown function DUF115 - - - 0.000000000000000000000000000000003109 143.0
DYD1_k127_4535086_2 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000009755 93.0
DYD1_k127_4535086_3 Peptidase M3A and M3B thimet oligopeptidase F - - - 0.000000000000000002238 87.0
DYD1_k127_4535086_4 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.0000000000004072 74.0
DYD1_k127_4535086_5 MORN repeat variant - - - 0.0000000000272 68.0
DYD1_k127_4535086_6 Protein of unknown function DUF115 - - - 0.000001727 54.0
DYD1_k127_4546182_0 oligopeptide transport K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 395.0
DYD1_k127_4546182_1 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 300.0
DYD1_k127_4546182_2 Pseudouridine synthase K06179 - 5.4.99.24 0.00000000000000000000000000000007171 129.0
DYD1_k127_4568876_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 6.976e-207 661.0
DYD1_k127_4568876_1 Tir chaperone protein (CesT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009998 251.0
DYD1_k127_4568876_2 - - - - 0.000000000000000000000000000000000000006488 154.0
DYD1_k127_4568876_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000004332 145.0
DYD1_k127_4568876_4 protein serine/threonine kinase activity K08282,K13303 - 2.7.11.1 0.000000000000000000005212 107.0
DYD1_k127_4595876_0 NAD dependent epimerase dehydratase family K17947 - 5.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 421.0
DYD1_k127_4595876_1 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000001095 216.0
DYD1_k127_4595876_2 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000005317 168.0
DYD1_k127_4595876_3 PFAM GHMP kinase K07031 - 2.7.1.168 0.0000000000000000000000000003337 117.0
DYD1_k127_4600936_0 Aminotransferase class-V K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 376.0
DYD1_k127_4600936_1 Serine threonine protein phosphatase K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000001258 225.0
DYD1_k127_4600936_2 CAAX protease self-immunity K07052 - - 0.00000000000000000000000003387 113.0
DYD1_k127_4602970_0 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008055 432.0
DYD1_k127_4602970_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001322 279.0
DYD1_k127_4602970_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.00000000000000000000000000000000000000000000000000006895 195.0
DYD1_k127_4619279_0 Protein of unknown function (DUF2867) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008958 497.0
DYD1_k127_4619279_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 411.0
DYD1_k127_4645558_0 haemagglutination activity domain - - - 0.000000000000000000000000000000000000005545 167.0
DYD1_k127_4655603_0 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003433 275.0
DYD1_k127_4663652_0 cell adhesion K02024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004951 303.0
DYD1_k127_4663652_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000003798 194.0
DYD1_k127_4663652_2 SelR domain K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000004731 175.0
DYD1_k127_4663652_3 MarC family integral membrane protein - - - 0.000000000000000000000000000000000003928 145.0
DYD1_k127_4663652_4 Transaldolase/Fructose-6-phosphate aldolase K00616 - 2.2.1.2 0.000000000000000000000000000000113 128.0
DYD1_k127_4663652_5 - - - - 0.000000001255 63.0
DYD1_k127_4679032_0 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000002538 242.0
DYD1_k127_4679032_1 required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000004572 245.0
DYD1_k127_4679032_2 Squalene-hopene cyclase C-terminal domain K06045 - 4.2.1.129,5.4.99.17 0.00000002786 55.0
DYD1_k127_4685056_0 Ribosomal RNA adenine dimethylase - - - 0.000000000000000000000000000000000000000000006236 169.0
DYD1_k127_4685056_1 mevalonate kinase K00869 - 2.7.1.36 0.000000000000000000000000000000000001017 150.0
DYD1_k127_4685056_2 WD40-like Beta Propeller Repeat - - - 0.0000003775 54.0
DYD1_k127_4688102_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 381.0
DYD1_k127_4688102_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 359.0
DYD1_k127_4688102_2 ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 343.0
DYD1_k127_4688102_3 COG2939 Carboxypeptidase C (cathepsin A) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000561 326.0
DYD1_k127_4688102_4 Serine carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 298.0
DYD1_k127_4688102_5 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000006355 147.0
DYD1_k127_4688102_6 Domain of unknown function (DUF4143) - - - 0.00000000000000000000003215 100.0
DYD1_k127_4688102_7 - - - - 0.00002488 55.0
DYD1_k127_4704112_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0005575,GO:0005576,GO:0005623,GO:0008150,GO:0009966,GO:0009967,GO:0009986,GO:0010646,GO:0010647,GO:0018995,GO:0020003,GO:0023051,GO:0023056,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0043900,GO:0043903,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044464,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0065007,GO:0065010,GO:1901222,GO:1901224,GO:1902531,GO:1902533,GO:2000535 - 8.298e-250 780.0
DYD1_k127_4704112_1 oligoendopeptidase F K08602 - - 1.102e-196 631.0
DYD1_k127_4704112_2 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000001081 143.0
DYD1_k127_4704112_3 NlpC/P60 family - - - 0.00000000000000000000000000000006986 130.0
DYD1_k127_4704112_4 PTS HPr component phosphorylation site K11189 - - 0.00000000000000000000000000002944 120.0
DYD1_k127_4704112_5 DedA family - - - 0.00000000000000000005508 98.0
DYD1_k127_4704112_6 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.00000001942 56.0
DYD1_k127_4704112_7 Tripartite motif containing 105 K12034 - 2.3.2.27 0.000001209 58.0
DYD1_k127_4726449_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.222e-209 657.0
DYD1_k127_4726449_1 Provides the rickettsial cell with host ATP in exchange for rickettsial ADP. This is an obligate exchange system. This energy acquiring activity is an important component of rickettsial parasitism K03301 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0008150,GO:0015711,GO:0015748,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0042221,GO:0042493,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051503,GO:0071702,GO:0071705,GO:0071944,GO:1901264 - 2.583e-201 639.0
DYD1_k127_4726449_2 transport system membrane protein K11708 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006997 394.0
DYD1_k127_4726449_3 Part of an ATP-driven transport system CPn0346 CPn0347 CPn0348 CPn0349 for a metal. Probably responsible for energy coupling to the transport system K11710 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 313.0
DYD1_k127_4726449_4 Belongs to the bacterial solute-binding protein 9 family K11707 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 314.0
DYD1_k127_4726449_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000001859 219.0
DYD1_k127_4738572_0 Glycosyl hydrolase family 63 C-terminal domain K22110 - - 3.06e-233 734.0
DYD1_k127_4738572_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 385.0
DYD1_k127_4738572_2 Glucokinase K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 350.0
DYD1_k127_4796258_0 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 501.0
DYD1_k127_4796258_1 Belongs to the UPF0176 family K07146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 390.0
DYD1_k127_4796258_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 284.0
DYD1_k127_4796258_3 swi snf helicase family - - - 0.000000000000000006942 92.0
DYD1_k127_4817997_0 racemase activity, acting on amino acids and derivatives K01779 - 5.1.1.13 0.00000000000000000000000000000000000000000000000000003399 195.0
DYD1_k127_4817997_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000003031 142.0
DYD1_k127_4817997_3 amino acid peptide transporter K03305 - - 0.000000000000000002294 98.0
DYD1_k127_4822297_0 - - - - 0.00000000000000000805 83.0
DYD1_k127_4822297_1 phosphate transporter K03306 - - 0.00003364 46.0
DYD1_k127_4822314_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 384.0
DYD1_k127_4822314_1 STAS domain K06378 - - 0.0000000000000000000000000000000003531 134.0
DYD1_k127_4822314_2 PFAM Sodium calcium exchanger membrane region K07301 GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0008150,GO:0008273,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015081,GO:0015085,GO:0015267,GO:0015291,GO:0015297,GO:0015298,GO:0015318,GO:0015368,GO:0015491,GO:0015672,GO:0016020,GO:0016021,GO:0019725,GO:0022803,GO:0022804,GO:0022821,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030955,GO:0031224,GO:0031226,GO:0031402,GO:0031420,GO:0034220,GO:0035725,GO:0042592,GO:0043167,GO:0043169,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0071804,GO:0071805,GO:0071944,GO:0072503,GO:0072507,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0099516 - 0.000000000000000000000000886 115.0
DYD1_k127_4822314_3 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 0.00004347 55.0
DYD1_k127_4833132_0 glucose-6-phosphate isomerase K01810 - 5.3.1.9 3.571e-211 670.0
DYD1_k127_4833132_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 437.0
DYD1_k127_4833132_10 Serine/threonine phosphatases, family 2C, catalytic domain K17506 - 3.1.3.16 0.0007542 50.0
DYD1_k127_4833132_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001495 283.0
DYD1_k127_4833132_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000005774 199.0
DYD1_k127_4833132_4 bacteriocin transport K03561 - - 0.0000000000000000000000000000000000000000000000000006326 190.0
DYD1_k127_4833132_5 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000004374 182.0
DYD1_k127_4833132_6 protein disulfide oxidoreductase activity K03611 - - 0.0000000000000000000000001503 112.0
DYD1_k127_4833132_7 biopolymer transport protein K03559 - - 0.0000000000000000000001194 103.0
DYD1_k127_4833132_8 - - - - 0.000000000000000009102 93.0
DYD1_k127_4833132_9 recombinase activity - - - 0.000000000001599 67.0
DYD1_k127_4910771_0 NUDIX domain - - - 0.000000000000000000000000000008797 130.0
DYD1_k127_4910771_1 Heme oxygenase - - - 0.000000000000000000001496 101.0
DYD1_k127_4910771_2 GDP-mannose mannosyl hydrolase activity - - - 0.000000000000000006863 94.0
DYD1_k127_4911172_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K12950 - 3.6.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 473.0
DYD1_k127_4911172_1 Anion-transporting ATPase K03496 - - 0.000000000000000000000000000000000000000000000000000000000002203 218.0
DYD1_k127_4911172_2 - - - - 0.000000000000000000000000000007311 121.0
DYD1_k127_4943103_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.000000000000000000000000000000000000000000106 163.0
DYD1_k127_4943103_1 outer membrane autotransporter barrel domain protein - - - 0.000000000000000000000868 110.0
DYD1_k127_4943103_2 - - - - 0.000000000000000002539 95.0
DYD1_k127_495322_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 368.0
DYD1_k127_495322_1 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 339.0
DYD1_k127_495322_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000949 240.0
DYD1_k127_495322_3 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000001101 216.0
DYD1_k127_495322_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000004264 151.0
DYD1_k127_495322_5 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000465 137.0
DYD1_k127_495322_7 competence protein - - - 0.00000000000005357 79.0
DYD1_k127_495322_9 oxidoreductases (related to aryl-alcohol dehydrogenases) - - - 0.00001158 48.0
DYD1_k127_4973079_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 567.0
DYD1_k127_4973079_1 Protein of unknown function, DUF393 - - - 0.00000000000000000000005309 104.0
DYD1_k127_4973079_2 Multidrug resistance protein MdtK K03327 - - 0.0000000000000000002882 89.0
DYD1_k127_4973079_3 Glycosyl transferase family 2 - - - 0.0000002533 60.0
DYD1_k127_5001265_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 629.0
DYD1_k127_5001265_1 Phosphoglucomutase phosphomannomutase K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 580.0
DYD1_k127_5001265_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000001597 207.0
DYD1_k127_5050754_2 Glycosyltransferase like family 2 - - - 0.0000000000004013 72.0
DYD1_k127_506050_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0002878 53.0
DYD1_k127_5063471_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 5.616e-254 805.0
DYD1_k127_5063471_1 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 524.0
DYD1_k127_5063471_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000002095 269.0
DYD1_k127_5063471_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000153 90.0
DYD1_k127_5063471_4 riboflavin biosynthesis protein K11753 - 2.7.1.26,2.7.7.2 0.000000000000000004497 89.0
DYD1_k127_5105767_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1.306e-204 662.0
DYD1_k127_5131815_0 ATP synthase, subunit I K02123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 576.0
DYD1_k127_5131815_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 398.0
DYD1_k127_5131815_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.00000000000000000000000000000000000000000000000000000000007298 210.0
DYD1_k127_5131815_3 ATP synthase, subunit K02124 - - 0.000000000000000000000000000000000000000000000000000000005332 201.0
DYD1_k127_5131815_4 MAP kinase activity. It is involved in the biological process described with protein phosphorylation K04441 GO:0000003,GO:0000075,GO:0000077,GO:0000165,GO:0000166,GO:0000187,GO:0000302,GO:0000303,GO:0000305,GO:0000902,GO:0000922,GO:0001501,GO:0001502,GO:0001525,GO:0001558,GO:0001568,GO:0001756,GO:0001775,GO:0001817,GO:0001819,GO:0001890,GO:0001932,GO:0001934,GO:0001944,GO:0002062,GO:0002225,GO:0002237,GO:0002251,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002385,GO:0002443,GO:0002444,GO:0002446,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002683,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002718,GO:0002720,GO:0002739,GO:0002741,GO:0002759,GO:0002760,GO:0002784,GO:0002791,GO:0002793,GO:0002831,GO:0002832,GO:0002833,GO:0002920,GO:0002921,GO:0002922,GO:0003002,GO:0003006,GO:0003007,GO:0003008,GO:0003012,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004707,GO:0004708,GO:0004712,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005819,GO:0005829,GO:0005856,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006629,GO:0006631,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006928,GO:0006935,GO:0006936,GO:0006939,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006972,GO:0006974,GO:0006979,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007178,GO:0007267,GO:0007275,GO:0007389,GO:0007399,GO:0007507,GO:0007517,GO:0007519,GO:0007564,GO:0007568,GO:0007569,GO:0007610,GO:0008022,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008284,GO:0008285,GO:0008340,GO:0008348,GO:0008361,GO:0009266,GO:0009314,GO:0009408,GO:0009411,GO:0009416,GO:0009605,GO:0009607,GO:0009611,GO:0009612,GO:0009615,GO:0009617,GO:0009620,GO:0009628,GO:0009636,GO:0009653,GO:0009743,GO:0009746,GO:0009749,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009952,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010212,GO:0010243,GO:0010259,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010646,GO:0010647,GO:0010648,GO:0010758,GO:0010759,GO:0010769,GO:0010827,GO:0010828,GO:0010830,GO:0010831,GO:0010883,GO:0010941,GO:0010952,GO:0010975,GO:0012501,GO:0012505,GO:0014706,GO:0014835,GO:0015630,GO:0016043,GO:0016192,GO:0016202,GO:0016301,GO:0016310,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016773,GO:0016909,GO:0017076,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019395,GO:0019538,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0019902,GO:0019903,GO:0022008,GO:0022414,GO:0022603,GO:0022604,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030097,GO:0030099,GO:0030111,GO:0030141,GO:0030154,GO:0030162,GO:0030178,GO:0030258,GO:0030278,GO:0030316,GO:0030334,GO:0030335,GO:0030534,GO:0030554,GO:0031098,GO:0031099,GO:0031279,GO:0031281,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031344,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031410,GO:0031570,GO:0031647,GO:0031663,GO:0031667,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032101,GO:0032102,GO:0032103,GO:0032147,GO:0032268,GO:0032270,GO:0032386,GO:0032388,GO:0032495,GO:0032496,GO:0032501,GO:0032502,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032655,GO:0032735,GO:0032787,GO:0032879,GO:0032880,GO:0032940,GO:0032989,GO:0033157,GO:0033554,GO:0033674,GO:0033993,GO:0034097,GO:0034284,GO:0034440,GO:0034599,GO:0034612,GO:0034614,GO:0034644,GO:0034762,GO:0034764,GO:0034774,GO:0035094,GO:0035095,GO:0035239,GO:0035282,GO:0035295,GO:0035556,GO:0035639,GO:0035924,GO:0035994,GO:0036094,GO:0036211,GO:0036230,GO:0038001,GO:0038066,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040016,GO:0040017,GO:0042060,GO:0042119,GO:0042127,GO:0042221,GO:0042246,GO:0042306,GO:0042307,GO:0042325,GO:0042327,GO:0042330,GO:0042493,GO:0042542,GO:0042594,GO:0042692,GO:0042742,GO:0042770,GO:0043009,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043403,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043436,GO:0043487,GO:0043488,GO:0043489,GO:0043549,GO:0043900,GO:0043901,GO:0043902,GO:0044093,GO:0044237,GO:0044238,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045055,GO:0045087,GO:0045321,GO:0045445,GO:0045595,GO:0045597,GO:0045598,GO:0045600,GO:0045637,GO:0045639,GO:0045646,GO:0045648,GO:0045661,GO:0045663,GO:0045664,GO:0045786,GO:0045793,GO:0045843,GO:0045844,GO:0045859,GO:0045860,GO:0045862,GO:0045893,GO:0045926,GO:0045927,GO:0045934,GO:0045935,GO:0045937,GO:0045944,GO:0046324,GO:0046326,GO:0046620,GO:0046621,GO:0046622,GO:0046677,GO:0046685,GO:0046686,GO:0046777,GO:0046822,GO:0046824,GO:0046903,GO:0048010,GO:0048070,GO:0048079,GO:0048082,GO:0048255,GO:0048273,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048608,GO:0048634,GO:0048635,GO:0048636,GO:0048638,GO:0048639,GO:0048640,GO:0048646,GO:0048670,GO:0048696,GO:0048699,GO:0048705,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050727,GO:0050767,GO:0050770,GO:0050776,GO:0050777,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050829,GO:0050830,GO:0050832,GO:0050896,GO:0050920,GO:0050921,GO:0051019,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051090,GO:0051091,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051146,GO:0051147,GO:0051149,GO:0051153,GO:0051155,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051216,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051270,GO:0051272,GO:0051301,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051403,GO:0051525,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051960,GO:0052547,GO:0055021,GO:0055022,GO:0055023,GO:0055024,GO:0055025,GO:0055026,GO:0055114,GO:0060043,GO:0060044,GO:0060045,GO:0060142,GO:0060143,GO:0060205,GO:0060255,GO:0060284,GO:0060341,GO:0060420,GO:0060421,GO:0060429,GO:0060537,GO:0060538,GO:0060548,GO:0060828,GO:0061013,GO:0061053,GO:0061061,GO:0061117,GO:0061387,GO:0061448,GO:0061458,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070391,GO:0070555,GO:0070848,GO:0070887,GO:0070935,GO:0071214,GO:0071216,GO:0071219,GO:0071222,GO:0071223,GO:0071241,GO:0071243,GO:0071248,GO:0071276,GO:0071310,GO:0071345,GO:0071347,GO:0071356,GO:0071363,GO:0071396,GO:0071478,GO:0071479,GO:0071482,GO:0071622,GO:0071675,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0072358,GO:0072359,GO:0072593,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090087,GO:0090090,GO:0090316,GO:0090335,GO:0090336,GO:0090398,GO:0090400,GO:0093002,GO:0097159,GO:0097367,GO:0097708,GO:0098542,GO:0098586,GO:0098743,GO:0099503,GO:0101002,GO:0104004,GO:0120035,GO:0140096,GO:1900015,GO:1900150,GO:1900180,GO:1900182,GO:1900407,GO:1900424,GO:1900426,GO:1901214,GO:1901215,GO:1901244,GO:1901265,GO:1901363,GO:1901564,GO:1901652,GO:1901698,GO:1901700,GO:1901701,GO:1901739,GO:1901741,GO:1901796,GO:1901861,GO:1901862,GO:1901863,GO:1902097,GO:1902369,GO:1902373,GO:1902531,GO:1902533,GO:1902680,GO:1902882,GO:1903311,GO:1903312,GO:1903506,GO:1903508,GO:1903530,GO:1903532,GO:1903706,GO:1903708,GO:1903827,GO:1903829,GO:1904589,GO:1904591,GO:1904813,GO:1904951,GO:1905048,GO:1905050,GO:1905521,GO:1905523,GO:1905952,GO:2000026,GO:2000112,GO:2000145,GO:2000147,GO:2000377,GO:2000379,GO:2001141,GO:2001182,GO:2001184 2.7.11.24 0.0000000000000001512 93.0
DYD1_k127_5150601_0 hemolysin activation secretion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 358.0
DYD1_k127_5150601_1 integral membrane protein - - - 0.000000000000000000000000000000005698 139.0
DYD1_k127_5150601_2 Parallel beta-helix repeats - - - 0.0000000000000000008752 96.0
DYD1_k127_5155680_0 peptide ABC transporter, periplasmic K02035,K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009291 374.0
DYD1_k127_5155680_1 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000009925 233.0
DYD1_k127_5155680_2 - - - - 0.000000000000000000000000000000000000000000000000000000002948 209.0
DYD1_k127_5155680_3 transmembrane transport - - - 0.000000000000000000000000000000000000000000000000000002072 209.0
DYD1_k127_5155680_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000004848 157.0
DYD1_k127_5155680_5 Lipase (class 2) - - - 0.000000000000000000000000000002522 126.0
DYD1_k127_5155680_6 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00001433 52.0
DYD1_k127_5155680_7 PFAM Membrane protein of K08972 - - 0.0005772 48.0
DYD1_k127_5181711_0 AMP-binding enzyme K01909 - 6.2.1.20 1.622e-243 780.0
DYD1_k127_5181711_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 368.0
DYD1_k127_5181711_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 301.0
DYD1_k127_518553_0 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005431 480.0
DYD1_k127_518553_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000007122 186.0
DYD1_k127_518553_2 transferase activity, transferring glycosyl groups K02844 - - 0.0000000000000000000000463 100.0
DYD1_k127_518553_4 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000004719 53.0
DYD1_k127_5259877_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 611.0
DYD1_k127_5259877_1 Fructose-bisphosphate aldolase class K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 564.0
DYD1_k127_5259877_11 Major facilitator Superfamily - - - 0.0000000000003344 72.0
DYD1_k127_5259877_12 Monogalactosyldiacylglycerol (MGDG) synthase - - - 0.0001544 55.0
DYD1_k127_5259877_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 564.0
DYD1_k127_5259877_3 exoribonuclease II activity K01147,K12573 - 3.1.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 483.0
DYD1_k127_5259877_4 Amino acid permease K20265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 471.0
DYD1_k127_5259877_5 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 339.0
DYD1_k127_5259877_6 Divalent cation transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 303.0
DYD1_k127_5259877_7 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001842 272.0
DYD1_k127_5259877_8 NUDIX domain K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000625 189.0
DYD1_k127_5259877_9 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000001305 164.0
DYD1_k127_5263125_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 6.264e-200 641.0
DYD1_k127_5263125_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 567.0
DYD1_k127_5263125_2 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 312.0
DYD1_k127_5263125_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000001539 242.0
DYD1_k127_5263125_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000005254 156.0
DYD1_k127_5263125_5 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000007377 106.0
DYD1_k127_5263125_6 metal-binding protein - - - 0.00000000000000000000001696 105.0
DYD1_k127_5263125_7 Domain of unknown function (DUF1732) - - - 0.000000000000000000001502 99.0
DYD1_k127_526704_0 Lantibiotic dehydratase, C terminus K20483 - - 5.129e-210 687.0
DYD1_k127_526704_1 Lanthionine synthetase C-like protein K20484 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001252 271.0
DYD1_k127_526704_2 - - - - 0.0000000000000000000001517 99.0
DYD1_k127_5288865_0 peptidyl-tyrosine sulfation - - - 8.452e-226 721.0
DYD1_k127_5288865_2 Transposase and inactivated derivatives - - - 0.0000000000000000121 83.0
DYD1_k127_5288865_3 - - - - 0.00000001108 57.0
DYD1_k127_5298384_0 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 399.0
DYD1_k127_5302721_0 COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component K09014 - - 1.972e-229 717.0
DYD1_k127_5302721_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 519.0
DYD1_k127_5302721_10 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000231 265.0
DYD1_k127_5302721_11 type III secretion inner membrane protein SctT K03228 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000317 253.0
DYD1_k127_5302721_12 Type III K03223 - - 0.000000000000000000000000000000000000000000000000000000002182 206.0
DYD1_k127_5302721_13 nUDIX hydrolase K01515 - 3.6.1.13 0.0000000000000000000000000000000000000001089 160.0
DYD1_k127_5302721_14 Male sterility protein K01710 - 4.2.1.46 0.00000000000000000000000000000000002355 137.0
DYD1_k127_5302721_15 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000004536 123.0
DYD1_k127_5302721_16 type III secretion inner membrane protein SctS K03227 - - 0.00000000000000000000000003399 110.0
DYD1_k127_5302721_17 peptidyl-tyrosine sulfation - - - 0.00000000000000000000003709 111.0
DYD1_k127_5302721_18 - - - - 0.00000000000000005472 87.0
DYD1_k127_5302721_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 509.0
DYD1_k127_5302721_3 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006323 446.0
DYD1_k127_5302721_4 Flotillin K07192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007418 449.0
DYD1_k127_5302721_5 ABC transporter K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 326.0
DYD1_k127_5302721_6 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 312.0
DYD1_k127_5302721_7 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 299.0
DYD1_k127_5302721_8 Type III secretion inner membrane protein SctR K03226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004592 283.0
DYD1_k127_5302721_9 Uncharacterized protein family (UPF0051) K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003083 274.0
DYD1_k127_5329196_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 2.495e-227 717.0
DYD1_k127_5329196_1 PFAM Amidohydrolase family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 433.0
DYD1_k127_5329196_2 Mate efflux family protein K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 329.0
DYD1_k127_5329196_3 Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide K01479 - 3.5.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000003017 274.0
DYD1_k127_5329196_4 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.0000000000000000000000000000000000000000000000000000000000000000005961 235.0
DYD1_k127_5329196_5 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase - - - 0.00002618 48.0
DYD1_k127_5365975_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 389.0
DYD1_k127_5365975_1 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 344.0
DYD1_k127_5365975_2 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000009651 158.0
DYD1_k127_5365975_3 MatE K03327 - - 0.000000000000006001 75.0
DYD1_k127_5369511_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006136 499.0
DYD1_k127_5369511_1 Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 418.0
DYD1_k127_5369511_2 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000002618 224.0
DYD1_k127_5369511_3 Phospholipase D family protein - - - 0.00000000000000000000000000000000000000000000000000000000000004397 226.0
DYD1_k127_5369511_4 UPF0056 inner membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000000294 202.0
DYD1_k127_5369511_5 Ribosomal L28 family K02902 - - 0.00000000000000000000000000001415 119.0
DYD1_k127_5369511_6 Lipase (class 2) - - - 0.00000000000000000000000000001697 130.0
DYD1_k127_5413643_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.052e-210 677.0
DYD1_k127_5413643_1 - - - - 0.000000000000000000000000000000000000000000000000000000000004816 219.0
DYD1_k127_5413643_2 Catalyzes the methylthiolation of N6- threonylcarbamoyladenosine (t(6)A), leading to the formation of 2- methylthio-N6-threonylcarbamoyladenosine (ms(2)t(6)A) at position 37 in tRNAs that read codons beginning with adenine K18707 - 2.8.4.5 0.00000000000000000000000000000000000000000000000003192 182.0
DYD1_k127_5413643_3 RING-type zinc-finger K19041 GO:0003674,GO:0003824,GO:0004842,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019941,GO:0030163,GO:0032446,GO:0036211,GO:0043161,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0051603,GO:0061630,GO:0061659,GO:0070647,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.27 0.0005888 47.0
DYD1_k127_5510491_0 Alpha/beta hydrolase family K01563 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009410,GO:0009987,GO:0016020,GO:0016787,GO:0016824,GO:0018786,GO:0019120,GO:0030312,GO:0042178,GO:0042197,GO:0042206,GO:0042221,GO:0044237,GO:0044248,GO:0044464,GO:0050896,GO:0051716,GO:0070887,GO:0071466,GO:0071704,GO:0071944,GO:1901575 3.8.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 431.0
DYD1_k127_5510491_1 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000001374 207.0
DYD1_k127_5510491_2 D-alanyl-D-alanine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000004255 187.0
DYD1_k127_5510491_3 NlpC/P60 family - - - 0.0000000000000000000000000000000000000000003677 175.0
DYD1_k127_5510491_5 - - - - 0.000000000000000000000000000008332 119.0
DYD1_k127_5510491_6 PhnA domain K06193 - - 0.00000000000000000000000001417 109.0
DYD1_k127_5510491_7 Enoyl-(Acyl carrier protein) reductase K00059,K22251 - 1.1.1.100,1.1.1.6 0.000000000000000000003711 98.0
DYD1_k127_5510491_9 PFAM GtrA-like protein - - - 0.00000001049 63.0
DYD1_k127_5524599_0 STELLO glycosyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007319 335.0
DYD1_k127_5524599_1 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000287 177.0
DYD1_k127_5524599_2 - - - - 0.000000000000008061 87.0
DYD1_k127_5543177_0 succinate dehydrogenase K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 447.0
DYD1_k127_5543177_1 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004819 320.0
DYD1_k127_5543177_2 succinate dehydrogenase K00241 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001887 262.0
DYD1_k127_5543177_3 nUDIX hydrolase K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000002153 237.0
DYD1_k127_5543177_4 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000001373 186.0
DYD1_k127_5543177_6 MotA TolQ ExbB proton channel family protein K03562 - - 0.0000000000000001867 83.0
DYD1_k127_5615457_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 379.0
DYD1_k127_5615457_1 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.0000000000000000000000000000000000000000000000000000000003378 213.0
DYD1_k127_5615457_2 membrane K15977 - - 0.000000000005577 72.0
DYD1_k127_5616825_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.387e-212 672.0
DYD1_k127_5616825_1 Amino acid permease K20265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 453.0
DYD1_k127_5616825_2 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system K02071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 320.0
DYD1_k127_5616825_3 C4-type zinc ribbon domain K07164 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005677 283.0
DYD1_k127_5616825_4 Binding-protein-dependent transport system inner membrane component K02072 - - 0.000000000000000000000000000000000000000000000000000000000000000000003015 241.0
DYD1_k127_5616825_5 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids K03733 - - 0.00000000000000000000000000000000000000000000000000001454 190.0
DYD1_k127_5616825_6 Belongs to the nlpA lipoprotein family K02073 - - 0.0000000000000000000000000000000000000000000000000005249 193.0
DYD1_k127_5616825_7 outer membrane autotransporter barrel domain protein - - - 0.000000000000000000000000000000000005601 151.0
DYD1_k127_5616825_8 Protein kinase domain K04345 - 2.7.11.11 0.0000000000000000000000000000000002137 145.0
DYD1_k127_562589_0 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008239 319.0
DYD1_k127_562589_1 Inter-alpha-trypsin inhibitor heavy - - - 0.0000003541 63.0
DYD1_k127_5674319_0 TRAM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005818 409.0
DYD1_k127_5674319_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000001445 244.0
DYD1_k127_5674319_2 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000001051 151.0
DYD1_k127_5674319_3 - - - - 0.00000000000000000000000000000000002024 140.0
DYD1_k127_5674319_4 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000005539 52.0
DYD1_k127_5706590_0 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water K10256,K10257,K21704,K21710,K21736 GO:0000003,GO:0002376,GO:0003674,GO:0003824,GO:0004497,GO:0004768,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006950,GO:0006952,GO:0006955,GO:0007275,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016053,GO:0016215,GO:0016491,GO:0016705,GO:0016709,GO:0016717,GO:0016720,GO:0019752,GO:0030176,GO:0030497,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032787,GO:0033559,GO:0040002,GO:0040012,GO:0040017,GO:0042175,GO:0042335,GO:0042389,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0045485,GO:0046394,GO:0048518,GO:0048856,GO:0050183,GO:0050789,GO:0050896,GO:0055114,GO:0065007,GO:0071704,GO:0072330,GO:0098827,GO:1901576 1.14.18.4,1.14.19.16,1.14.19.22,1.14.19.25,1.14.19.33,1.14.19.34,1.14.19.35,1.14.19.36,1.14.19.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 321.0
DYD1_k127_5706590_1 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000004281 234.0
DYD1_k127_5706590_2 Toll-like receptor 7 K05404 GO:0000139,GO:0000323,GO:0001774,GO:0001775,GO:0001817,GO:0001819,GO:0001932,GO:0002218,GO:0002221,GO:0002224,GO:0002252,GO:0002253,GO:0002274,GO:0002376,GO:0002682,GO:0002684,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005794,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0007249,GO:0007252,GO:0008144,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009612,GO:0009615,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010008,GO:0010556,GO:0010557,GO:0010604,GO:0010646,GO:0010647,GO:0012505,GO:0016020,GO:0016310,GO:0019220,GO:0019222,GO:0019538,GO:0023051,GO:0023052,GO:0023056,GO:0030139,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031347,GO:0031349,GO:0031399,GO:0031410,GO:0031982,GO:0031984,GO:0032009,GO:0032101,GO:0032103,GO:0032268,GO:0032479,GO:0032481,GO:0032642,GO:0032647,GO:0032648,GO:0032649,GO:0032675,GO:0032677,GO:0032722,GO:0032727,GO:0032728,GO:0032729,GO:0032755,GO:0032757,GO:0032991,GO:0034154,GO:0034162,GO:0035197,GO:0035556,GO:0036019,GO:0036020,GO:0036211,GO:0042035,GO:0042108,GO:0042116,GO:0042175,GO:0042325,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043235,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045072,GO:0045078,GO:0045088,GO:0045089,GO:0045321,GO:0045335,GO:0045354,GO:0045356,GO:0045357,GO:0045359,GO:0045414,GO:0045416,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050727,GO:0050729,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051607,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0061900,GO:0061980,GO:0065007,GO:0071214,GO:0071260,GO:0071496,GO:0071704,GO:0071944,GO:0080090,GO:0080134,GO:0097159,GO:0097708,GO:0098542,GO:0098588,GO:0098791,GO:0098805,GO:0098827,GO:0098852,GO:0104004,GO:1901222,GO:1901224,GO:1901363,GO:1901564,GO:1902531,GO:1902533 - 0.00000001463 66.0
DYD1_k127_5715530_0 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002904 269.0
DYD1_k127_5715530_1 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K21744 - - 0.0000000000000000000000000000000000000000000000000000000000005215 219.0
DYD1_k127_5715530_2 Protein of unknown function (DUF2000) - - - 0.0000000000000000000000000000000000000000000000000000001786 196.0
DYD1_k127_5715530_3 Helix-turn-helix XRE-family like proteins K07729 - - 0.00000000000000000001152 93.0
DYD1_k127_5715530_4 Phosphotransferase enzyme family - - - 0.0000000000000887 73.0
DYD1_k127_5715530_5 - - - - 0.0000000000001226 74.0
DYD1_k127_5715530_6 - - - - 0.000001164 51.0
DYD1_k127_5726225_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1102.0
DYD1_k127_5726225_1 C-methyltransferase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 552.0
DYD1_k127_5726225_10 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843,K02849 - - 0.00000001472 59.0
DYD1_k127_5726225_2 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 456.0
DYD1_k127_5726225_3 RmlD substrate binding domain K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 417.0
DYD1_k127_5726225_4 mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006913 330.0
DYD1_k127_5726225_5 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000441 282.0
DYD1_k127_5726225_6 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004962 275.0
DYD1_k127_5726225_7 GHMP kinases C terminal K07031 - 2.7.1.168 0.00000000000000000000000000000000000000000000000000000000000000003159 228.0
DYD1_k127_5726225_8 RNA polymerase K03092 - - 0.0000000000000000000000000000000000000000000000000000000000018 224.0
DYD1_k127_5726225_9 - - - - 0.00000000000000000000000000000001068 137.0
DYD1_k127_5742652_0 General secretion pathway protein E K02454 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 602.0
DYD1_k127_5742652_1 General secretion pathway protein F K02455,K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 294.0
DYD1_k127_5742652_2 Prepilin-type N-terminal cleavage methylation domain - - - 0.000000000000002064 80.0
DYD1_k127_5780824_0 Sigma-54 dependent response regulator K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 447.0
DYD1_k127_5780824_1 Protein of unknown function DUF115 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008837 320.0
DYD1_k127_5780824_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000001465 53.0
DYD1_k127_5821784_0 Serine/Threonine protein kinases, catalytic domain K13302,K13303,K13304 GO:0000226,GO:0000902,GO:0001558,GO:0002028,GO:0002119,GO:0002164,GO:0003008,GO:0003013,GO:0003014,GO:0003096,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004712,GO:0005246,GO:0005488,GO:0005515,GO:0005543,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005768,GO:0005769,GO:0005783,GO:0005789,GO:0005829,GO:0005886,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006873,GO:0006875,GO:0006883,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007019,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007492,GO:0007498,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007616,GO:0007632,GO:0008015,GO:0008092,GO:0008150,GO:0008152,GO:0008217,GO:0008289,GO:0008306,GO:0008542,GO:0009314,GO:0009416,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009791,GO:0009888,GO:0009889,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010639,GO:0010646,GO:0010648,GO:0010720,GO:0010765,GO:0010769,GO:0010770,GO:0010941,GO:0010959,GO:0010975,GO:0010976,GO:0012505,GO:0014070,GO:0015459,GO:0015672,GO:0016020,GO:0016043,GO:0016247,GO:0016301,GO:0016310,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016773,GO:0017080,GO:0017081,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0022008,GO:0022411,GO:0022603,GO:0022604,GO:0023051,GO:0023052,GO:0023057,GO:0030001,GO:0030003,GO:0030004,GO:0030030,GO:0030154,GO:0030182,GO:0030307,GO:0030334,GO:0031109,GO:0031110,GO:0031111,GO:0031113,GO:0031115,GO:0031175,GO:0031323,GO:0031326,GO:0031333,GO:0031344,GO:0031346,GO:0031410,GO:0031960,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032271,GO:0032272,GO:0032409,GO:0032411,GO:0032501,GO:0032502,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032886,GO:0032984,GO:0032989,GO:0032990,GO:0033043,GO:0033554,GO:0033993,GO:0034220,GO:0035091,GO:0035556,GO:0036211,GO:0040008,GO:0040012,GO:0042127,GO:0042175,GO:0042221,GO:0042592,GO:0042981,GO:0042995,GO:0043005,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043269,GO:0043270,GO:0043401,GO:0043402,GO:0043412,GO:0043423,GO:0043434,GO:0043624,GO:0043933,GO:0044057,GO:0044058,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045927,GO:0048037,GO:0048156,GO:0048382,GO:0048468,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048585,GO:0048666,GO:0048699,GO:0048731,GO:0048812,GO:0048814,GO:0048856,GO:0048858,GO:0048869,GO:0048878,GO:0050767,GO:0050769,GO:0050773,GO:0050775,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050877,GO:0050890,GO:0050896,GO:0051046,GO:0051049,GO:0051050,GO:0051090,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051252,GO:0051261,GO:0051270,GO:0051384,GO:0051493,GO:0051494,GO:0051716,GO:0051726,GO:0051960,GO:0051962,GO:0055037,GO:0055065,GO:0055067,GO:0055078,GO:0055080,GO:0055082,GO:0055085,GO:0060255,GO:0060284,GO:0060341,GO:0060453,GO:0060548,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070293,GO:0070294,GO:0070507,GO:0070887,GO:0071310,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0097435,GO:0097458,GO:0097708,GO:0098771,GO:0098772,GO:0098827,GO:0099106,GO:0120025,GO:0120035,GO:0120036,GO:0120039,GO:0140096,GO:1900006,GO:1901099,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901981,GO:1902903,GO:1902904,GO:1903506,GO:1903827,GO:1904375,GO:1904508,GO:1905475,GO:2000026,GO:2000112,GO:2000145,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237,GO:2001239,GO:2001240 2.7.11.1 0.000000000000000000000000000000001802 137.0
DYD1_k127_5821784_1 Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate K00991,K21030 - 2.7.7.40,2.7.7.60 0.000000000000000000000000002748 116.0
DYD1_k127_5821784_2 protein serine/threonine kinase activity K08811 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564 2.7.11.1 0.000000000000000000000000004381 128.0
DYD1_k127_5894888_0 Male sterility protein K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009731 286.0
DYD1_k127_5894888_1 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000007115 214.0
DYD1_k127_5894888_2 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.0000000000000000000000000000000000000000000000000000001895 199.0
DYD1_k127_5894888_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000004494 194.0
DYD1_k127_5917282_1 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000001457 177.0
DYD1_k127_5967884_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 444.0
DYD1_k127_5967884_1 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007421 334.0
DYD1_k127_5967884_2 MazG nucleotide pyrophosphohydrolase domain K02499 - - 0.00000000000000000000000000000000000000000000000003977 184.0
DYD1_k127_5967884_3 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000001369 66.0
DYD1_k127_5981947_0 Domain of unknown function (DUF4113) K03502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 327.0
DYD1_k127_5981947_1 Belongs to the peptidase S24 family K03503 - - 0.000000000000000000000000000000000000000000000085 171.0
DYD1_k127_5988425_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000606 269.0
DYD1_k127_5988425_1 regulator of chromosome condensation, RCC1 - - - 0.00000000000000000000000002754 124.0
DYD1_k127_5988425_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286,K07275 - - 0.000000000000000127 89.0
DYD1_k127_5988425_4 Endonuclease Exonuclease Phosphatase - - - 0.00002471 55.0
DYD1_k127_5988429_0 Peptidoglycan-binding domain 1 protein K17733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 424.0
DYD1_k127_5988429_1 sequence-specific DNA binding - - - 0.00001378 50.0
DYD1_k127_5998153_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 514.0
DYD1_k127_5998153_1 Ribosomal protein L13 K02871 - - 0.00000000000000000000000000000000000000000000000000006064 190.0
DYD1_k127_5998153_2 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000002634 173.0
DYD1_k127_5998153_3 acyl-coa hydrolase - - - 0.0000000000000000000000000000000000000000000006662 170.0
DYD1_k127_5998153_4 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000003117 118.0
DYD1_k127_5998153_5 - - - - 0.0000000000000000000009095 106.0
DYD1_k127_6019082_0 GMC oxidoreductase - - - 4.096e-211 666.0
DYD1_k127_6019082_1 Glucose dehydrogenase C-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001603 262.0
DYD1_k127_6019082_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000001238 162.0
DYD1_k127_6019082_3 Zinc finger, C3HC4 type (RING finger) K10631 GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016567,GO:0016740,GO:0016925,GO:0018193,GO:0018205,GO:0019538,GO:0019787,GO:0019789,GO:0019941,GO:0030163,GO:0032446,GO:0036211,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0051603,GO:0061630,GO:0061659,GO:0061665,GO:0070647,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.27 0.00004577 51.0
DYD1_k127_6019082_4 Preprotein translocase SecG subunit K03075 - - 0.00005159 46.0
DYD1_k127_6019082_5 - - - - 0.0001185 49.0
DYD1_k127_6040980_0 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 458.0
DYD1_k127_6040980_1 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 369.0
DYD1_k127_6040980_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000003708 243.0
DYD1_k127_6040980_3 PFAM AMP-dependent synthetase and ligase K00666 - - 0.0000000000000000000000000000000000000000000000000000000000002395 225.0
DYD1_k127_6040980_4 Isochorismate synthase K02552,K15040 GO:0002376,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0008150,GO:0008152,GO:0008483,GO:0008909,GO:0009058,GO:0009108,GO:0009110,GO:0009266,GO:0009396,GO:0009409,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009627,GO:0009628,GO:0009696,GO:0009697,GO:0009814,GO:0009987,GO:0010118,GO:0010817,GO:0016020,GO:0016053,GO:0016740,GO:0016769,GO:0016853,GO:0016866,GO:0016999,GO:0017000,GO:0017144,GO:0018130,GO:0018958,GO:0019438,GO:0019752,GO:0019867,GO:0031090,GO:0031347,GO:0031348,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032787,GO:0034641,GO:0042180,GO:0042181,GO:0042372,GO:0042374,GO:0042398,GO:0042445,GO:0042446,GO:0042537,GO:0042558,GO:0042559,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0046189,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0048519,GO:0048583,GO:0048585,GO:0050486,GO:0050789,GO:0050832,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051707,GO:0065007,GO:0065008,GO:0071704,GO:0072330,GO:0080134,GO:0098542,GO:0098588,GO:0098805,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901661,GO:1901663 5.4.4.2 0.00000000000000000000000000000000000000000000000000000005744 207.0
DYD1_k127_6040980_5 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000007063 174.0
DYD1_k127_6040980_6 -O-antigen K02847 - - 0.00000000000000000000000000000000000000000002116 179.0
DYD1_k127_6040980_7 Serine aminopeptidase, S33 K08680 - 4.2.99.20 0.00000000000000000000000000000000000364 145.0
DYD1_k127_6040980_8 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.0000000000000000000000000000006721 133.0
DYD1_k127_6050015_0 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004132 499.0
DYD1_k127_6050015_1 COG0778 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007392 251.0
DYD1_k127_6050015_2 PFAM amino acid permease-associated region K20265 - - 0.00000000000000001518 83.0
DYD1_k127_6093184_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 448.0
DYD1_k127_6093184_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 397.0
DYD1_k127_6093184_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000001415 196.0
DYD1_k127_6093184_3 protein tyrosine phosphatase activity K04055,K13740 GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0016020,GO:0019867,GO:0030100,GO:0030312,GO:0030313,GO:0031975,GO:0032879,GO:0044462,GO:0044464,GO:0045806,GO:0048519,GO:0048523,GO:0050764,GO:0050765,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051128,GO:0051129,GO:0060627,GO:0065007,GO:0071944 - 0.000000000000000000000000000000000000001062 161.0
DYD1_k127_6093184_4 DoxX-like family K15977 - - 0.00000000000000000000000006229 113.0
DYD1_k127_6121944_0 trehalose synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000001124 243.0
DYD1_k127_6121944_1 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843,K02849 - - 0.00000000000000000000000000000000000000000008664 170.0
DYD1_k127_6141888_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000894 442.0
DYD1_k127_6141888_1 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 308.0
DYD1_k127_6141888_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000007528 227.0
DYD1_k127_6141888_3 Catalyzes the NADPH-dependent reduction of beta- ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis K00059 - 1.1.1.100 0.000000001593 59.0
DYD1_k127_6141888_4 membrane K07277 - - 0.000946 44.0
DYD1_k127_6160844_0 Outer membrane efflux protein K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000869 298.0
DYD1_k127_6160844_1 CAAX protease self-immunity - - - 0.000000000000000000000000000000000000000000000000000002624 205.0
DYD1_k127_6160844_2 DNA-damage-inducible protein d K14623 - - 0.0000000000000000000006028 96.0
DYD1_k127_6191369_0 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005673 415.0
DYD1_k127_6191369_1 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 400.0
DYD1_k127_6191369_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000005679 269.0
DYD1_k127_6191369_3 Modulates the polysaccharide chain length of enterobacterial common antigen (ECA) - - - 0.00000000000000000000000000000000000000003492 169.0
DYD1_k127_6197856_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009938 545.0
DYD1_k127_6197856_1 polymerase K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 392.0
DYD1_k127_6197856_10 thioesterase K07107 - - 0.000000000002172 72.0
DYD1_k127_6197856_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000165 277.0
DYD1_k127_6197856_3 acyl-CoA dehydrogenase K11731 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001634 264.0
DYD1_k127_6197856_4 Stage II sporulation protein E (SpoIIE) K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000741 257.0
DYD1_k127_6197856_5 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000002208 208.0
DYD1_k127_6197856_6 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000002774 184.0
DYD1_k127_6197856_7 SpoU rRNA Methylase family K03437 - - 0.000000000000000000000000000000000000000000000000005265 190.0
DYD1_k127_6197856_8 - - - - 0.000000000000000000000000000000000000000001325 159.0
DYD1_k127_6197856_9 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000003459 74.0
DYD1_k127_6204504_0 Protein of unknown function (DUF1207) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044 400.0
DYD1_k127_6204504_1 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000002337 259.0
DYD1_k127_6204504_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000003055 203.0
DYD1_k127_6208812_0 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 389.0
DYD1_k127_6208812_1 Bacterial type II and III secretion system protein K03219 - - 0.00000000000000000000000000000000000000000000000009255 186.0
DYD1_k127_6216937_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006792 415.0
DYD1_k127_6216937_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000006109 228.0
DYD1_k127_6216937_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000000000006665 203.0
DYD1_k127_6216937_3 exodeoxyribonuclease VII activity K03602 - 3.1.11.6 0.00000002806 58.0
DYD1_k127_6232508_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.096e-210 662.0
DYD1_k127_6232508_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 520.0
DYD1_k127_6232508_10 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000003184 181.0
DYD1_k127_6232508_11 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000004966 172.0
DYD1_k127_6232508_12 - - - - 0.000000000000000000000000000000000000000000002152 172.0
DYD1_k127_6232508_13 Ribosomal protein L17 K02879 - - 0.0000000000000000000000000000000000000000005867 161.0
DYD1_k127_6232508_14 binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000001009 149.0
DYD1_k127_6232508_15 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000005818 125.0
DYD1_k127_6232508_16 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000001559 104.0
DYD1_k127_6232508_17 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000009719 100.0
DYD1_k127_6232508_18 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000003181 67.0
DYD1_k127_6232508_19 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000007591 57.0
DYD1_k127_6232508_2 Catalyzes the oxidative phosphorylation of glyceraldehyde 3-phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 463.0
DYD1_k127_6232508_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 329.0
DYD1_k127_6232508_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000005947 237.0
DYD1_k127_6232508_5 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000002192 235.0
DYD1_k127_6232508_6 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000000004315 214.0
DYD1_k127_6232508_7 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000001578 211.0
DYD1_k127_6232508_8 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000006494 198.0
DYD1_k127_6232508_9 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000000000002665 193.0
DYD1_k127_6273217_0 penicillin-binding protein - - - 7.122e-206 668.0
DYD1_k127_6273217_1 PFAM NAD-dependent epimerase dehydratase K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 467.0
DYD1_k127_6273217_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 387.0
DYD1_k127_6273217_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 319.0
DYD1_k127_6273217_4 penicillin-binding protein - - - 0.000000000000000000000000003207 116.0
DYD1_k127_6279690_0 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 479.0
DYD1_k127_6279690_1 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 319.0
DYD1_k127_6279690_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006656 271.0
DYD1_k127_6300813_0 VWA domain containing CoxE-like protein K09989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 548.0
DYD1_k127_6300813_1 AAA domain (dynein-related subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000003381 231.0
DYD1_k127_6300813_2 Phenazine biosynthesis-like protein - - - 0.0000000000000000000000000000000002063 135.0
DYD1_k127_6330903_0 Filamentation induced by cAMP protein fic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 402.0
DYD1_k127_634316_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 489.0
DYD1_k127_634316_1 ABC transporter C-terminal domain K15738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 477.0
DYD1_k127_634316_2 HflC and HflK could regulate a protease K04087 - - 0.00000000000001563 77.0
DYD1_k127_6358577_0 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.000000000001353 79.0
DYD1_k127_6358577_1 protein methyltransferase activity K11434,K20421 - 2.1.1.303,2.1.1.319 0.000000000001636 79.0
DYD1_k127_6381637_0 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000119 276.0
DYD1_k127_6381637_1 DNA topoisomerase (ATP-hydrolyzing) inhibitor activity K13652 - - 0.00000000000000000000000000000000000000001972 156.0
DYD1_k127_640453_0 Putative quorum-sensing-regulated virulence factor K02342,K03763,K09954,K10857 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 336.0
DYD1_k127_640453_1 - - - - 0.00000000000000000000000000000001361 133.0
DYD1_k127_640453_2 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000001949 115.0
DYD1_k127_640453_3 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.00000000000000001446 83.0
DYD1_k127_6409807_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1122.0
DYD1_k127_6409807_1 - - - - 0.00000000000000000000000000001263 122.0
DYD1_k127_6411026_0 Sugar (and other) transporter K08151,K08153 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 344.0
DYD1_k127_6411026_1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 290.0
DYD1_k127_6411026_2 Mitochondrial small ribosomal subunit Rsm22 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001878 272.0
DYD1_k127_6411026_3 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000001294 215.0
DYD1_k127_6411026_4 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000005998 178.0
DYD1_k127_6411026_5 - - - - 0.00000000000000000000000000007657 118.0
DYD1_k127_6411026_6 Doxx family - - - 0.00002788 56.0
DYD1_k127_642501_0 Domain of unknown function (DUF4277) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007877 394.0
DYD1_k127_642501_1 DDE_Tnp_1-associated - - - 0.0000000000000000000000000002344 114.0
DYD1_k127_6439000_0 Glycosyltransferase like family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 301.0
DYD1_k127_6448734_0 UTP--glucose-1-phosphate uridylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 408.0
DYD1_k127_6448734_1 SWI complex, BAF60b domains - - - 0.000000000000000000000000000005924 120.0
DYD1_k127_6483698_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.337e-247 773.0
DYD1_k127_6483698_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00895 - 2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004856 508.0
DYD1_k127_6483698_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 322.0
DYD1_k127_6483698_3 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000002309 99.0
DYD1_k127_6483698_4 MatE K03327 - - 0.000000000000000000004514 97.0
DYD1_k127_6499845_0 AcrB/AcrD/AcrF family K03296,K18138 - - 2.739e-309 977.0
DYD1_k127_6499845_1 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 327.0
DYD1_k127_6502970_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 472.0
DYD1_k127_6502970_1 inositol 2-dehydrogenase activity K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004961 405.0
DYD1_k127_6502970_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 310.0
DYD1_k127_653744_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 451.0
DYD1_k127_653744_1 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 437.0
DYD1_k127_653744_2 amine oxidase - - - 0.0000000000000000000000000000000000000000001842 176.0
DYD1_k127_653744_3 purine ribonucleoside salvage K00759 - 2.4.2.7 0.000000000000000000000000000000000000000007551 168.0
DYD1_k127_653744_4 NADP-retinol dehydrogenase activity K11150 GO:0001523,GO:0001750,GO:0003008,GO:0003674,GO:0003824,GO:0004033,GO:0004745,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0005929,GO:0006066,GO:0006629,GO:0006694,GO:0006720,GO:0006721,GO:0007600,GO:0007601,GO:0008106,GO:0008150,GO:0008152,GO:0008202,GO:0008610,GO:0009058,GO:0009987,GO:0010817,GO:0016020,GO:0016021,GO:0016101,GO:0016491,GO:0016614,GO:0016616,GO:0031224,GO:0031226,GO:0032501,GO:0034308,GO:0034754,GO:0042445,GO:0042572,GO:0042995,GO:0043005,GO:0043226,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044422,GO:0044425,GO:0044441,GO:0044459,GO:0044463,GO:0044464,GO:0050877,GO:0050953,GO:0052650,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:0097458,GO:0097730,GO:0097731,GO:0097733,GO:0120025,GO:0120038,GO:1901360,GO:1901362,GO:1901576,GO:1901615 - 0.000000000000000000002031 104.0
DYD1_k127_653744_5 - - - - 0.0003061 48.0
DYD1_k127_6578136_0 A G-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 330.0
DYD1_k127_6578136_1 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000003057 205.0
DYD1_k127_6578136_3 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase - - - 0.00000009362 55.0
DYD1_k127_6582392_0 insulinase family K01408 - 3.4.24.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 551.0
DYD1_k127_6582392_1 Acyltransferase K00630 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006763 283.0
DYD1_k127_6664531_0 SNF2 family N-terminal domain - - - 0.0 1058.0
DYD1_k127_6664531_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 533.0
DYD1_k127_6709348_0 AcrB/AcrD/AcrF family K03296,K18138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 350.0
DYD1_k127_6709348_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 336.0
DYD1_k127_6709348_2 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000116 233.0
DYD1_k127_6709348_3 methyltransferase - - - 0.00000000000000000000000000000000001116 145.0
DYD1_k127_6709348_4 Serine aminopeptidase, S33 K06889 - - 0.00000000002688 73.0
DYD1_k127_6725767_0 Cytochrome C and Quinol oxidase polypeptide I K02298 - 1.10.3.10 1.807e-299 925.0
DYD1_k127_6725767_1 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 453.0
DYD1_k127_6725767_2 COX Aromatic Rich Motif K02297 - 1.10.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 361.0
DYD1_k127_6725767_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000002385 203.0
DYD1_k127_6725767_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0003134 46.0
DYD1_k127_6737862_0 Belongs to the aldehyde dehydrogenase family K13821 - 1.2.1.88,1.5.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009573 583.0
DYD1_k127_6737862_1 DNA helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 513.0
DYD1_k127_6737862_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005993 271.0
DYD1_k127_6737862_3 Phosphoglycerate mutase family protein - - - 0.00000000000000000000004473 106.0
DYD1_k127_6747550_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.772e-260 809.0
DYD1_k127_6747550_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 3.637e-238 753.0
DYD1_k127_6747550_2 sulfite reductase K00380 - 1.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 328.0
DYD1_k127_6747550_3 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000001442 235.0
DYD1_k127_6747550_4 Belongs to the EUO family - - - 0.00000000000000000000000000000000000000000000000000000000007372 207.0
DYD1_k127_6747550_5 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate - - - 0.0000000000000000000000000000000000000000000000000000005179 203.0
DYD1_k127_6747550_6 TIGRFAM outer membrane autotransporter barrel domain - - - 0.000000000000000000000000000000000000000000000000003363 207.0
DYD1_k127_6747550_7 adhes_NPXG filamentous hemagglutinin family N-terminal domain protein - GO:0005575,GO:0005576 - 0.00009822 47.0
DYD1_k127_6747618_0 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000001511 134.0
DYD1_k127_6747618_1 Large family of predicted nucleotide-binding domains - - - 0.000000000000000000005639 94.0
DYD1_k127_6747618_3 Haloacid dehalogenase-like hydrolase K17623 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009116,GO:0009163,GO:0009611,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042060,GO:0042578,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046134,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 3.1.3.96 0.0000001897 53.0
DYD1_k127_678429_0 Type III K03224 - 3.6.3.14 2.985e-225 704.0
DYD1_k127_678429_1 Type III flagellar switch regulator (C-ring) FliN C-term K02417 - - 0.0000000000000000000000000000000000000000000000000000000002575 216.0
DYD1_k127_678429_2 YscO-like protein - - - 0.0000000000000000000000000000000006061 138.0
DYD1_k127_678429_4 Serine threonine-protein kinase - - - 0.000000000074 65.0
DYD1_k127_6797259_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 362.0
DYD1_k127_6797259_1 Protein of unknown function (DUF2709) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004031 334.0
DYD1_k127_6797259_2 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000005956 115.0
DYD1_k127_6797259_3 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000002421 65.0
DYD1_k127_6813881_0 Adenylosuccinate lyase C-terminus K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 454.0
DYD1_k127_6813881_1 Virulence plasmid protein pGP6-D-related protein - - - 0.000000000000000000000000000000000000000000000000000000000000000009512 231.0
DYD1_k127_6813881_2 - - - - 0.00001191 54.0
DYD1_k127_6871449_0 Sodium:sulfate symporter transmembrane region K03319 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009109 295.0
DYD1_k127_6871449_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000007555 246.0
DYD1_k127_6871449_2 - - - - 0.0000000000000000000000000000196 128.0
DYD1_k127_687314_0 alcohol dehydrogenase K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 360.0
DYD1_k127_689489_0 Major Facilitator Superfamily K07783 - - 3.026e-195 617.0
DYD1_k127_689489_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase (By similarity) K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 428.0
DYD1_k127_6927486_0 sulfuric ester hydrolase activity K07014 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 377.0
DYD1_k127_6927486_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671,K22345 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9,4.3.1.9 0.000000000000000000000000000000000000000000166 165.0
DYD1_k127_6933897_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 4.559e-232 731.0
DYD1_k127_6933897_1 4Fe-4S single cluster domain K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 372.0
DYD1_k127_6933897_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000003679 145.0
DYD1_k127_6933897_3 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.000001232 50.0
DYD1_k127_694650_0 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005786 258.0
DYD1_k127_694650_1 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000136 248.0
DYD1_k127_694650_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002032 239.0
DYD1_k127_694650_3 carboxypeptidase activity - - - 0.00000000000000000000000000000000000000000003137 162.0
DYD1_k127_694650_4 acetyltransferase - - - 0.000000000000000000000000000000000000000001205 160.0
DYD1_k127_6955230_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 8.121e-316 979.0
DYD1_k127_6955230_1 Aminoacyl-tRNA editing domain K09759 - 6.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 422.0
DYD1_k127_6955230_10 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000003755 63.0
DYD1_k127_6955230_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000000002642 211.0
DYD1_k127_6955230_3 glycosyl transferase family 8 - - - 0.0000000000000000000000000000000000000000000000002913 184.0
DYD1_k127_6955230_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA K02956 - - 0.0000000000000000000000000000000000000000002681 159.0
DYD1_k127_6955230_5 - - - - 0.0000000000000000000000000000000000000001485 157.0
DYD1_k127_6955230_6 Ribosomal protein L31 K02909 - - 0.0000000000000000000000003675 108.0
DYD1_k127_6955230_7 Rhomboid family - - - 0.0000000000000000000000004961 114.0
DYD1_k127_6955230_8 Methyltransferase domain - - - 0.000000000000000008826 91.0
DYD1_k127_6955230_9 tRNA wobble adenosine to inosine editing - - - 0.000000000000008867 78.0
DYD1_k127_6972711_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 2137.0
DYD1_k127_6972711_1 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 2.758e-195 621.0
DYD1_k127_6972711_2 Glycosyl transferase family 11 - - - 0.0000000000000000000000000000000000000000000000003356 187.0
DYD1_k127_6978098_0 hydrolase activity, acting on ester bonds K02170 - 3.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 325.0
DYD1_k127_6978098_1 - - - - 0.00000000000000000000000001937 112.0
DYD1_k127_717530_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 616.0
DYD1_k127_717530_1 maintenance of epithelial cell apical/basal polarity - - - 0.0000000000000000000001056 108.0
DYD1_k127_73575_0 Helix-turn-helix domain K07496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 519.0
DYD1_k127_73575_1 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000002703 156.0
DYD1_k127_7608_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 6.427e-267 837.0
DYD1_k127_785236_0 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1082.0
DYD1_k127_785236_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000122 226.0
DYD1_k127_785236_2 peptidyl-tyrosine sulfation - - - 0.00006486 56.0
DYD1_k127_785236_3 - - - - 0.0002033 49.0
DYD1_k127_795317_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 293.0
DYD1_k127_795317_1 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000188 205.0
DYD1_k127_804099_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 557.0
DYD1_k127_804099_1 Resolvase, N terminal domain - - - 0.0000000000000000001297 89.0
DYD1_k127_811437_0 Tryptophan/tyrosine permease family K03834 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 425.0
DYD1_k127_811437_1 Pyridine nucleotide-disulphide oxidoreductase K03885,K10716 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006882 274.0
DYD1_k127_811437_2 Tryptophan/tyrosine permease family K03834 - - 0.00000000000000000000021 99.0
DYD1_k127_833033_0 Uncharacterised conserved protein (DUF2156) K01163 - - 0.0000000000000000000000000000000000002675 145.0
DYD1_k127_833033_1 Uncharacterised conserved protein (DUF2156) K01163 - - 0.0000000000000001707 84.0
DYD1_k127_833033_2 Peptidase dimerization domain protein - - - 0.0000000000003201 75.0
DYD1_k127_906891_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1142.0
DYD1_k127_906891_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007239 492.0
DYD1_k127_906891_2 Vitamin K epoxide reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001969 238.0
DYD1_k127_906891_3 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000000000006832 186.0
DYD1_k127_906891_4 - - - - 0.0000000000005139 73.0
DYD1_k127_923013_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000001127 146.0
DYD1_k127_923013_1 NUDIX domain - - - 0.000000000000000000000000000001251 125.0
DYD1_k127_923013_2 BioY family K03523 - - 0.00000000000000000000000005274 114.0
DYD1_k127_923013_3 Glycosyl transferase, family 2 K20444 - - 0.00000000008764 71.0
DYD1_k127_932583_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005832 561.0
DYD1_k127_932583_1 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 432.0
DYD1_k127_932583_2 - - - - 0.00000000000000000000000000000000000000000000000000000000006693 214.0
DYD1_k127_975937_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 413.0
DYD1_k127_975937_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000007579 241.0
DYD1_k127_975937_2 Protein involved in meta-pathway of phenol degradation - - - 0.00000000000000000000000000000000002797 145.0
DYD1_k127_975937_3 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000001063 123.0
DYD1_k127_975937_4 Cold shock K03704 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0044424,GO:0044444,GO:0044464,GO:0050896 - 0.000000000000000000009283 93.0