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Overview

ID MAG00945
Name DYD3_bin.10
Sample SMP0027
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Alphaproteobacteria
Order Caulobacterales
Family Maricaulaceae
Genus JAJFFL01
Species
Assembly information
Completeness (%) 91.23
Contamination (%) 2.25
GC content (%) 70.0
N50 (bp) 17,949
Genome size (bp) 4,172,977

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3664

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_101455_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 4.05e-228 736.0
DYD3_k127_101455_1 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 585.0
DYD3_k127_101455_10 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000000104 166.0
DYD3_k127_101455_11 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.00000000000000000000000000000000004809 141.0
DYD3_k127_101455_12 - - - - 0.0000000000000000000000000268 113.0
DYD3_k127_101455_13 flagellar assembly - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000001558 85.0
DYD3_k127_101455_14 Rod binding protein - - - 0.0000000000000002008 85.0
DYD3_k127_101455_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 GO:0005575,GO:0005623,GO:0009288,GO:0009425,GO:0042597,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 467.0
DYD3_k127_101455_3 the Bradyrhizobium protein in this cluster is associated with the thick flagella K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 368.0
DYD3_k127_101455_4 Cytidylyltransferase K07257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007229 290.0
DYD3_k127_101455_5 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003376 267.0
DYD3_k127_101455_6 Protein of unknown function (DUF1194) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000533 243.0
DYD3_k127_101455_7 Belongs to the flagella basal body rod proteins family K02391,K02392 - - 0.0000000000000000000000000000000000000000000000000000000000003953 219.0
DYD3_k127_101455_8 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.000000000000000000000000000000000000000000000000000000001371 212.0
DYD3_k127_101455_9 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000007713 201.0
DYD3_k127_1025477_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 4.555e-269 848.0
DYD3_k127_1025477_1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000002111 239.0
DYD3_k127_1025477_2 - - - - 0.000000000001625 79.0
DYD3_k127_1025477_3 - - - - 0.000000000907 70.0
DYD3_k127_1052550_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006009 604.0
DYD3_k127_1052550_1 tRNA cytidylyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 547.0
DYD3_k127_1052550_10 - - - - 0.0000000000000000000000000000000000000000002183 162.0
DYD3_k127_1052550_11 YjbR - - - 0.0000000000000000000000000000000000002058 156.0
DYD3_k127_1052550_12 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.15.1.1 0.00000000000000000000000000000000007941 139.0
DYD3_k127_1052550_13 COG0115 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00826,K02619 - 2.6.1.42,4.1.3.38 0.0000000000000000000000000000000001808 139.0
DYD3_k127_1052550_14 - - - - 0.0000000000000000000000000000004435 127.0
DYD3_k127_1052550_15 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000006507 74.0
DYD3_k127_1052550_2 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 427.0
DYD3_k127_1052550_3 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 427.0
DYD3_k127_1052550_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 368.0
DYD3_k127_1052550_5 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 331.0
DYD3_k127_1052550_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 295.0
DYD3_k127_1052550_7 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000003262 224.0
DYD3_k127_1052550_8 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000000008237 173.0
DYD3_k127_1052550_9 Protein of unknown function (DUF541) K09807 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000000000000008313 174.0
DYD3_k127_1074983_0 Retinal pigment epithelial membrane protein K11159 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 391.0
DYD3_k127_1074983_1 Retinal pigment epithelial membrane protein K11159 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 379.0
DYD3_k127_1074983_2 PQQ enzyme repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000231 292.0
DYD3_k127_1088908_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1008.0
DYD3_k127_1088908_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 3.988e-313 975.0
DYD3_k127_1088908_10 Protein of unknown function (DUF1688) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009781 470.0
DYD3_k127_1088908_11 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 452.0
DYD3_k127_1088908_12 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 441.0
DYD3_k127_1088908_13 chemotaxis MotB protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 416.0
DYD3_k127_1088908_14 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 417.0
DYD3_k127_1088908_15 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 383.0
DYD3_k127_1088908_16 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 359.0
DYD3_k127_1088908_17 Uracil phosphoribosyltransferase K00761 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 341.0
DYD3_k127_1088908_18 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 342.0
DYD3_k127_1088908_19 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 301.0
DYD3_k127_1088908_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 4.196e-233 736.0
DYD3_k127_1088908_20 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008925 295.0
DYD3_k127_1088908_21 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003075 248.0
DYD3_k127_1088908_22 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000000000007681 235.0
DYD3_k127_1088908_23 Riboflavin synthase K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000001436 233.0
DYD3_k127_1088908_24 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000004634 237.0
DYD3_k127_1088908_25 in Escherichia coli this protein forms a dimer and binds manganese K02446,K11532 - 3.1.3.11,3.1.3.37 0.00000000000000000000000000000000000000000000000000000000000000007305 226.0
DYD3_k127_1088908_26 MarR family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000006625 223.0
DYD3_k127_1088908_27 RibD C-terminal domain K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000159 224.0
DYD3_k127_1088908_28 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000005488 216.0
DYD3_k127_1088908_29 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000001907 229.0
DYD3_k127_1088908_3 poly(R)-hydroxyalkanoic acid synthase K03821 - - 1.415e-228 731.0
DYD3_k127_1088908_30 ROS/MUCR transcriptional regulator protein - - - 0.000000000000000000000000000000000000000000000000000000008055 201.0
DYD3_k127_1088908_31 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000000000111 182.0
DYD3_k127_1088908_32 COG2913 Small protein A (tmRNA-binding) - - - 0.000000000000000000000000000000000000000000000006914 177.0
DYD3_k127_1088908_33 PRC-barrel domain - - - 0.00000000000000000000000000000000000000000000004643 174.0
DYD3_k127_1088908_34 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000006177 153.0
DYD3_k127_1088908_35 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000005848 148.0
DYD3_k127_1088908_36 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000006066 153.0
DYD3_k127_1088908_37 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000003364 142.0
DYD3_k127_1088908_38 Ubiquinol-cytochrome C chaperone K17662 - - 0.0000000000000000000000000000001472 130.0
DYD3_k127_1088908_39 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.000000000000000003486 97.0
DYD3_k127_1088908_4 GTP cyclohydrolase N terminal - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008686,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016829,GO:0016830,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 3.137e-216 676.0
DYD3_k127_1088908_40 YMGG-like Gly-zipper - - - 0.0000000000000004997 85.0
DYD3_k127_1088908_41 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) - - - 0.0000000000000006669 89.0
DYD3_k127_1088908_42 - - - - 0.000000000000001345 84.0
DYD3_k127_1088908_43 Ankyrin repeats (many copies) - - - 0.0000000004538 70.0
DYD3_k127_1088908_5 COG2366 Protein related to penicillin acylase K01434 - 3.5.1.11 2.145e-206 668.0
DYD3_k127_1088908_6 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.1.2.1 1.475e-196 621.0
DYD3_k127_1088908_7 Aminotransferase class I and II K14261,K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 612.0
DYD3_k127_1088908_8 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 594.0
DYD3_k127_1088908_9 5-aminolevulinic acid synthase K00643 - 2.3.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 584.0
DYD3_k127_1105516_0 xanthine dehydrogenase, molybdopterin binding subunit K13482 - 1.17.1.4 6.507e-319 996.0
DYD3_k127_1105516_1 Xanthine dehydrogenase iron-sulfur cluster and FAD-binding subunit A K13481 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 538.0
DYD3_k127_1105516_10 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000002035 185.0
DYD3_k127_1105516_11 Ureidoglycolate lyase K01483 - 4.3.2.3 0.00000000000000000000000000000000000000000000004896 175.0
DYD3_k127_1105516_12 Protein of unknown function (DUF1272) K09984 - - 0.0000000000000000000000000000000000008594 141.0
DYD3_k127_1105516_13 Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily K07127 GO:0006139,GO:0006144,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009112,GO:0009987,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:1901360,GO:1901564 3.5.2.17 0.000000000000000000000000000000000003201 147.0
DYD3_k127_1105516_2 Polysaccharide deacetylase K00365,K01452 GO:0000003,GO:0000272,GO:0003006,GO:0005575,GO:0005618,GO:0005619,GO:0005623,GO:0005631,GO:0005975,GO:0005976,GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006037,GO:0006039,GO:0006040,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009272,GO:0009277,GO:0009653,GO:0009987,GO:0010383,GO:0010927,GO:0016043,GO:0016052,GO:0016998,GO:0017144,GO:0019953,GO:0022402,GO:0022411,GO:0022413,GO:0022414,GO:0022607,GO:0030154,GO:0030312,GO:0030435,GO:0030437,GO:0030476,GO:0031160,GO:0031505,GO:0032502,GO:0032505,GO:0032989,GO:0034218,GO:0034232,GO:0034293,GO:0042244,GO:0042546,GO:0042737,GO:0043170,GO:0043934,GO:0043935,GO:0044036,GO:0044085,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044277,GO:0044426,GO:0044462,GO:0044464,GO:0044703,GO:0045229,GO:0046348,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0051321,GO:0051704,GO:0070590,GO:0070591,GO:0070726,GO:0070910,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071853,GO:0071854,GO:0071940,GO:0071944,GO:0071966,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903046 1.7.3.3,3.5.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009011 474.0
DYD3_k127_1105516_3 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009886 487.0
DYD3_k127_1105516_4 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004092 460.0
DYD3_k127_1105516_5 Glycosyl transferase family 21 K03669 GO:0005575,GO:0016020 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 462.0
DYD3_k127_1105516_6 Belongs to the allantoicase family K01477 - 3.5.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 409.0
DYD3_k127_1105516_7 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006234 285.0
DYD3_k127_1105516_8 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.000000000000000000000000000000000000000000000000000000001999 216.0
DYD3_k127_1105516_9 Belongs to the urease gamma subunit family K01430,K14048 - 3.5.1.5 0.0000000000000000000000000000000000000000000000000001946 185.0
DYD3_k127_1118783_0 Aminomethyltransferase folate-binding domain K15066 - 2.1.1.341 1.246e-228 715.0
DYD3_k127_1118783_1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle K01638 - 2.3.3.9 3.168e-222 707.0
DYD3_k127_1118783_10 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000000000000054 220.0
DYD3_k127_1118783_11 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000003948 149.0
DYD3_k127_1118783_12 Belongs to the ompA family K03286 - - 0.000000000000000000000000000002255 135.0
DYD3_k127_1118783_13 Belongs to the ompA family K03286 - - 0.00000000000000000000000006805 121.0
DYD3_k127_1118783_14 methyltransferase - - - 0.0000000000000000000001109 109.0
DYD3_k127_1118783_15 - - - - 0.0000000000000000000235 100.0
DYD3_k127_1118783_16 Belongs to the UPF0337 (CsbD) family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000001091 93.0
DYD3_k127_1118783_17 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334,K03943 - 1.6.5.3,1.6.99.3 0.0000000000000005103 90.0
DYD3_k127_1118783_18 GtrA-like protein - - - 0.00000000000004912 81.0
DYD3_k127_1118783_19 - - - - 0.00000000000007623 83.0
DYD3_k127_1118783_2 Major Facilitator Superfamily - - - 5.672e-218 684.0
DYD3_k127_1118783_20 COG0457 FOG TPR repeat - - - 0.0000004786 63.0
DYD3_k127_1118783_22 rRNA binding - - - 0.000136 55.0
DYD3_k127_1118783_3 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 543.0
DYD3_k127_1118783_4 homoserine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 383.0
DYD3_k127_1118783_5 TRAP transporter solute receptor TAXI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 362.0
DYD3_k127_1118783_6 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 327.0
DYD3_k127_1118783_7 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 298.0
DYD3_k127_1118783_8 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001216 270.0
DYD3_k127_1118783_9 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon - - - 0.0000000000000000000000000000000000000000000000000000000000000000002314 238.0
DYD3_k127_1133696_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1549.0
DYD3_k127_1133696_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1322.0
DYD3_k127_1133696_10 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003671 281.0
DYD3_k127_1133696_11 COG0500 SAM-dependent methyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000001411 233.0
DYD3_k127_1133696_12 Outer membrane efflux protein K15725 - - 0.000000000000000000000000000000000000000000000000000000000000000004 243.0
DYD3_k127_1133696_13 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000006626 215.0
DYD3_k127_1133696_14 DsrE/DsrF-like family K06039 - - 0.000000000000000000000000000000000000000000000003294 175.0
DYD3_k127_1133696_15 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000859 164.0
DYD3_k127_1133696_16 - - - - 0.000000000000000000000000000000000000000002228 175.0
DYD3_k127_1133696_17 MAPEG family K00799 - 2.5.1.18 0.00000000000000000000000000000000000000001153 157.0
DYD3_k127_1133696_18 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000006926 160.0
DYD3_k127_1133696_19 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000002479 169.0
DYD3_k127_1133696_2 P-type ATPase K17686 - 3.6.3.54 0.0 1096.0
DYD3_k127_1133696_20 - - - - 0.000000000000000000000000000000000000002311 151.0
DYD3_k127_1133696_21 Metal-sensitive transcriptional repressor K21600 - - 0.00000000000000000000001061 103.0
DYD3_k127_1133696_22 Protein of unknown function (DUF3703) - - - 0.0000000000000000000001093 113.0
DYD3_k127_1133696_3 Major Facilitator Superfamily - - - 3.598e-216 676.0
DYD3_k127_1133696_4 Barrel-sandwich domain of CusB or HlyD membrane-fusion K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 507.0
DYD3_k127_1133696_5 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 496.0
DYD3_k127_1133696_6 PFAM Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 387.0
DYD3_k127_1133696_7 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 389.0
DYD3_k127_1133696_8 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001811 282.0
DYD3_k127_1133696_9 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006065 281.0
DYD3_k127_1152266_0 Protein of unknown function (DUF1587) - - - 0.0 1040.0
DYD3_k127_1152266_1 COG0402 Cytosine deaminase and related metal-dependent hydrolases - - - 2.127e-205 647.0
DYD3_k127_1152266_10 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 307.0
DYD3_k127_1152266_11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000002735 224.0
DYD3_k127_1152266_12 acetylesterase activity - - - 0.000000000000000000000000000000000000000000000000000934 195.0
DYD3_k127_1152266_13 Transcriptional regulator, LysR family - - - 0.00000000000000000000000000000000000000001671 168.0
DYD3_k127_1152266_14 alcohol dehydrogenase - - - 0.0000000000000000000000000004073 116.0
DYD3_k127_1152266_2 histidyl-tRNA synthetase K01892 - 6.1.1.21 2.726e-194 617.0
DYD3_k127_1152266_3 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003852 588.0
DYD3_k127_1152266_4 PFAM Xanthine uracil vitamin C permease K06901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 582.0
DYD3_k127_1152266_5 Permease family K03458 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 570.0
DYD3_k127_1152266_6 Belongs to the GPI family K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 521.0
DYD3_k127_1152266_8 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 415.0
DYD3_k127_1152266_9 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004224 366.0
DYD3_k127_1171683_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 574.0
DYD3_k127_1171683_1 COG0471 Di- and tricarboxylate transporters K03319,K09477,K11106,K14445 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 486.0
DYD3_k127_1171683_10 Sodium/hydrogen exchanger family K11105 - - 0.00000000000000000000000000000000000000000006364 170.0
DYD3_k127_1171683_11 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000006578 165.0
DYD3_k127_1171683_12 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000000000002091 141.0
DYD3_k127_1171683_13 protein conserved in bacteria - - - 0.0000000000000000000000004602 106.0
DYD3_k127_1171683_14 ThiS family - - - 0.00000000000000000000746 108.0
DYD3_k127_1171683_2 ABC transporter, ATP-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006681 459.0
DYD3_k127_1171683_3 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 423.0
DYD3_k127_1171683_4 Membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 414.0
DYD3_k127_1171683_5 PFAM histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008606 372.0
DYD3_k127_1171683_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005436 275.0
DYD3_k127_1171683_7 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000767 253.0
DYD3_k127_1171683_8 Protein of unknown function (DUF1036) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000216 254.0
DYD3_k127_1171683_9 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000795 218.0
DYD3_k127_1193924_0 Formate dehydrogenase subunit alpha K00123 - 1.17.1.9 0.0 1500.0
DYD3_k127_1193924_1 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1101.0
DYD3_k127_1193924_10 belongs to the aldehyde dehydrogenase family - - - 3.321e-194 621.0
DYD3_k127_1193924_11 lysine 2,3-aminomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007869 614.0
DYD3_k127_1193924_12 ribosomal rna small subunit methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008578 604.0
DYD3_k127_1193924_13 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00124,K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005412 576.0
DYD3_k127_1193924_14 COG1012 NAD-dependent aldehyde dehydrogenases K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 516.0
DYD3_k127_1193924_15 PFAM Molybdopterin dehydrogenase, FAD-binding K11178 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 395.0
DYD3_k127_1193924_16 D-ala D-ala ligase C-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005793 331.0
DYD3_k127_1193924_17 PFAM NmrA family protein K19267 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 323.0
DYD3_k127_1193924_18 Glucokinase K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002103 287.0
DYD3_k127_1193924_19 Major Facilitator K08195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001156 274.0
DYD3_k127_1193924_2 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.0 1007.0
DYD3_k127_1193924_20 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000002677 259.0
DYD3_k127_1193924_21 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000001198 240.0
DYD3_k127_1193924_22 2Fe-2S -binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000001856 235.0
DYD3_k127_1193924_23 Protein of unknown function (DUF3237) - - - 0.0000000000000000000000000000000000000000000000000000000000000000002442 243.0
DYD3_k127_1193924_24 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000001956 214.0
DYD3_k127_1193924_25 COG0685 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000004974 211.0
DYD3_k127_1193924_26 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000001689 199.0
DYD3_k127_1193924_27 formate dehydrogenase - - - 0.0000000000000000000000000000000000000000004131 165.0
DYD3_k127_1193924_29 SnoaL-like domain - - - 0.00000000000000000000000000000001703 133.0
DYD3_k127_1193924_3 TonB dependent receptor - - - 1.592e-309 972.0
DYD3_k127_1193924_30 cheY-homologous receiver domain K02485 - - 0.0000000000000000000001563 104.0
DYD3_k127_1193924_31 Uncharacterized protein conserved in bacteria (DUF2188) - - - 0.00000000000000000000746 94.0
DYD3_k127_1193924_32 cheY-homologous receiver domain - - - 0.000000000000000001754 91.0
DYD3_k127_1193924_33 - - - - 0.00000000000000001522 86.0
DYD3_k127_1193924_34 formate dehydrogenase K00126 - 1.17.1.9 0.00000000000000001823 88.0
DYD3_k127_1193924_35 - - - - 0.0000000000000002242 89.0
DYD3_k127_1193924_36 Cytochrome c K00406 - - 0.00000000000001045 88.0
DYD3_k127_1193924_37 Bacterial regulatory proteins, tetR family - - - 0.00000000000008396 82.0
DYD3_k127_1193924_38 Transcriptional regulatory protein, C terminal K02483,K07669 - - 0.000000000001993 73.0
DYD3_k127_1193924_39 TIR domain - - - 0.0000001358 65.0
DYD3_k127_1193924_4 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 2.38e-274 868.0
DYD3_k127_1193924_40 Short repeat of unknown function (DUF308) - - - 0.000006826 56.0
DYD3_k127_1193924_5 Hydantoinase/oxoprolinase K01473 - 3.5.2.14 1.004e-234 750.0
DYD3_k127_1193924_6 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 2.993e-221 716.0
DYD3_k127_1193924_7 xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 1.027e-220 709.0
DYD3_k127_1193924_8 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 1.908e-212 674.0
DYD3_k127_1193924_9 FAD linked oxidases, C-terminal domain K05797 - 1.17.99.1 3.18e-208 659.0
DYD3_k127_1276934_0 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 4.575e-285 908.0
DYD3_k127_1276934_1 FeS assembly protein SufB K09014 - - 3.678e-246 770.0
DYD3_k127_1276934_10 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 297.0
DYD3_k127_1276934_11 Bacterioferritin comigratory protein K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000221 212.0
DYD3_k127_1276934_12 Rrf2 family K13643 - - 0.000000000000000000000000000000000000000000000000001297 186.0
DYD3_k127_1276934_13 COG1664 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000000000000007371 163.0
DYD3_k127_1276934_14 - - - - 0.0000000000000000000000000000000000000001178 156.0
DYD3_k127_1276934_2 Protein of unknown function (DUF1343) - - - 1.67e-222 693.0
DYD3_k127_1276934_3 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300,K08301 - 3.1.26.12 1.264e-202 665.0
DYD3_k127_1276934_4 Protein of unknown function - - - 1.613e-195 652.0
DYD3_k127_1276934_5 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008328 519.0
DYD3_k127_1276934_6 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 513.0
DYD3_k127_1276934_7 COG1104 Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes K04487 GO:0000096,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006464,GO:0006520,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016043,GO:0016226,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0018282,GO:0018283,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0031071,GO:0031163,GO:0031974,GO:0031981,GO:0032324,GO:0034641,GO:0036211,GO:0042278,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043545,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0046983,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0065003,GO:0070013,GO:0071704,GO:0071840,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 383.0
DYD3_k127_1276934_8 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 365.0
DYD3_k127_1276934_9 Alpha beta K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 316.0
DYD3_k127_1284176_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 1.988e-231 727.0
DYD3_k127_1284176_1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 585.0
DYD3_k127_1284176_10 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000001508 141.0
DYD3_k127_1284176_11 COG0593 ATPase involved in DNA replication initiation - - - 0.0000000000000000000000000001097 121.0
DYD3_k127_1284176_12 Protein of unknown function (DUF1491) - - - 0.00000000000000000000000002586 113.0
DYD3_k127_1284176_13 - - - - 0.00000000000000000000004606 111.0
DYD3_k127_1284176_14 WD-40 repeat - - - 0.00000000000000000001483 106.0
DYD3_k127_1284176_15 Caudovirus prohead serine protease K06904 - - 0.00000000000000000005874 96.0
DYD3_k127_1284176_16 - - - - 0.000000000000001358 85.0
DYD3_k127_1284176_17 - - - - 0.000000000007934 77.0
DYD3_k127_1284176_2 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 554.0
DYD3_k127_1284176_3 phage portal protein, HK97 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 479.0
DYD3_k127_1284176_4 Terminase RNaseH-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 447.0
DYD3_k127_1284176_5 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006261 262.0
DYD3_k127_1284176_6 signal transduction histidine kinase K07716,K11357 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000003608 256.0
DYD3_k127_1284176_7 Fe-S metabolism associated domain K02426 - - 0.00000000000000000000000000000000000000000000009703 172.0
DYD3_k127_1284176_8 - - - - 0.000000000000000000000000000000000000000002608 169.0
DYD3_k127_1284176_9 Transcriptional regulator - - - 0.000000000000000000000000000000000000004845 148.0
DYD3_k127_129529_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 8.386e-291 914.0
DYD3_k127_129529_1 Angiotensin-converting enzyme K01283 - 3.4.15.1 3.909e-244 773.0
DYD3_k127_129529_10 uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 286.0
DYD3_k127_129529_11 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000966 279.0
DYD3_k127_129529_12 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000904 280.0
DYD3_k127_129529_13 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002064 276.0
DYD3_k127_129529_14 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000004683 243.0
DYD3_k127_129529_15 redox-sensitive transcriptional activator SoxR K13639 - - 0.00000000000000000000000000000000000000000000000000000000000007495 217.0
DYD3_k127_129529_16 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000001088 203.0
DYD3_k127_129529_17 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000003652 208.0
DYD3_k127_129529_18 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000000000000000000000000939 196.0
DYD3_k127_129529_19 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000003129 201.0
DYD3_k127_129529_2 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000959 596.0
DYD3_k127_129529_20 dUTPase K01494 - 3.5.4.13 0.00000000000000000000000000000000000000006275 156.0
DYD3_k127_129529_21 COG0346 Lactoylglutathione lyase and related lyases - - - 0.0000000000000000000000000000000000000003274 158.0
DYD3_k127_129529_22 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950,K13940 - 2.7.6.3,4.1.2.25 0.00000000000000000000000000000000000001454 150.0
DYD3_k127_129529_23 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000000000000000003245 143.0
DYD3_k127_129529_24 - - - - 0.000000000000000000000000000000000001849 151.0
DYD3_k127_129529_25 PFAM surface presentation of antigens (SPOA) protein K02417 - - 0.000000000000000000000000000001045 123.0
DYD3_k127_129529_26 Protein of unknown function (DUF805) - - - 0.0000000000000000000000002057 112.0
DYD3_k127_129529_27 Protein of unknown function (DUF433) - - - 0.000000000000000000000002587 106.0
DYD3_k127_129529_28 - - - - 0.00000000000000000000003215 100.0
DYD3_k127_129529_29 (twin-arginine translocation) pathway signal - - - 0.0000000000000005229 90.0
DYD3_k127_129529_3 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 571.0
DYD3_k127_129529_30 dUTP biosynthetic process K01494 - 3.5.4.13 0.00000000000377 70.0
DYD3_k127_129529_31 Protein of unknown function (DUF805) - - - 0.000000000005951 72.0
DYD3_k127_129529_4 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007758 411.0
DYD3_k127_129529_5 Pyridoxal-phosphate dependent enzyme K01754 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006520,GO:0006563,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016841,GO:0016853,GO:0016854,GO:0016855,GO:0017144,GO:0018249,GO:0019538,GO:0019752,GO:0019842,GO:0030170,GO:0030378,GO:0030848,GO:0036094,GO:0036211,GO:0036361,GO:0042219,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046416,GO:0046437,GO:0046872,GO:0047661,GO:0048037,GO:0050662,GO:0070178,GO:0070179,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901607 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 363.0
DYD3_k127_129529_6 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004597 370.0
DYD3_k127_129529_7 FMN-dependent dehydrogenase K00104,K16422 - 1.1.3.15,1.1.3.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 348.0
DYD3_k127_129529_8 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 340.0
DYD3_k127_129529_9 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 303.0
DYD3_k127_129593_0 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000594 276.0
DYD3_k127_129593_1 metal cluster binding - - - 0.0000000000000000000000000000000000005127 157.0
DYD3_k127_1315159_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 416.0
DYD3_k127_1315159_1 Electron transfer flavoprotein K03522 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 421.0
DYD3_k127_1315159_10 - - - - 0.000000000000000000000000000000000000000000000000000000000008994 208.0
DYD3_k127_1315159_11 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000009333 187.0
DYD3_k127_1315159_12 Belongs to the GcvT family K06980,K22073 - - 0.0000000000000000000000000000000000000000000008729 177.0
DYD3_k127_1315159_13 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000002571 166.0
DYD3_k127_1315159_14 protein tyrosine phosphatase - - - 0.000000000000000000000000000000000000004134 152.0
DYD3_k127_1315159_15 Universal stress protein family - - - 0.0000000000000000000000000000000000000306 154.0
DYD3_k127_1315159_16 Carboxylesterase family - - - 0.0000000000000000000000000000000000000591 165.0
DYD3_k127_1315159_17 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000001813 145.0
DYD3_k127_1315159_18 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000003648 130.0
DYD3_k127_1315159_19 Bacterial signalling protein N terminal repeat - - - 0.0000000000000000000000000000006429 141.0
DYD3_k127_1315159_2 belongs to the nudix hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 401.0
DYD3_k127_1315159_20 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000005839 125.0
DYD3_k127_1315159_21 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000009157 118.0
DYD3_k127_1315159_22 - - - - 0.0000000000000000000000005133 107.0
DYD3_k127_1315159_23 Response regulator, receiver - - - 0.00000000000000000000007807 106.0
DYD3_k127_1315159_24 LytTr DNA-binding domain - - - 0.000000000000000000004009 98.0
DYD3_k127_1315159_25 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000009366 104.0
DYD3_k127_1315159_26 - - - - 0.000000000000000001273 100.0
DYD3_k127_1315159_27 - - - - 0.00000000006631 72.0
DYD3_k127_1315159_28 Protein of unknown function (DUF2385) - - - 0.0000003437 59.0
DYD3_k127_1315159_3 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 380.0
DYD3_k127_1315159_4 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 344.0
DYD3_k127_1315159_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000702 323.0
DYD3_k127_1315159_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 288.0
DYD3_k127_1315159_7 Metal dependent phosphohydrolases with conserved 'HD' motif. K06952 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005582 287.0
DYD3_k127_1315159_8 Oxidoreductase FAD-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001267 273.0
DYD3_k127_1315159_9 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000003545 241.0
DYD3_k127_1317433_0 - - - - 0.00000000003085 74.0
DYD3_k127_1317433_1 - - - - 0.0007529 46.0
DYD3_k127_1318106_0 membrane - - - 1.281e-225 718.0
DYD3_k127_1318106_1 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 8.843e-196 619.0
DYD3_k127_1318106_2 FAD linked oxidase domain protein K05797 - 1.17.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 580.0
DYD3_k127_1318106_3 FAD linked oxidase domain protein K05797 - 1.17.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008871 563.0
DYD3_k127_1318106_4 COG4993 Glucose dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 556.0
DYD3_k127_1318106_5 Aminoglycoside phosphotransferase K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 379.0
DYD3_k127_1318106_6 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001087 285.0
DYD3_k127_1318106_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000001558 107.0
DYD3_k127_1318106_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000007428 105.0
DYD3_k127_1361205_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 1.671e-237 743.0
DYD3_k127_1361205_1 Glycosyl hydrolase family 3 N terminal domain K01207,K05349 - 3.2.1.21,3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 343.0
DYD3_k127_1361205_10 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000000000002071 94.0
DYD3_k127_1361205_11 mttA/Hcf106 family K03116 - - 0.000000000001358 70.0
DYD3_k127_1361205_12 Nickel/cobalt transporter regulator - - - 0.00000000007555 72.0
DYD3_k127_1361205_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 302.0
DYD3_k127_1361205_3 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001555 282.0
DYD3_k127_1361205_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000002731 239.0
DYD3_k127_1361205_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000006566 230.0
DYD3_k127_1361205_6 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000006163 189.0
DYD3_k127_1361205_7 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000001731 179.0
DYD3_k127_1361205_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 GO:0003674,GO:0005215 - 0.00000000000000000000004255 105.0
DYD3_k127_1361205_9 Sporulation related domain - - - 0.0000000000000000002023 93.0
DYD3_k127_1368318_0 ATPase, AAA K03924 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 467.0
DYD3_k127_1368318_1 tRNA nucleotidyltransferase poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000002894 272.0
DYD3_k127_1368318_2 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000005166 216.0
DYD3_k127_1368318_3 protein conserved in bacteria K09986 - - 0.000000000000000000000000000000000000000000000000000000000268 209.0
DYD3_k127_1368318_4 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.0000000000000000000000000000000000000000000000000000000008168 213.0
DYD3_k127_1368318_5 - - - - 0.00000000001822 70.0
DYD3_k127_1383244_0 Dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 498.0
DYD3_k127_1383244_1 Serine aminopeptidase, S33 - - - 0.00000002672 55.0
DYD3_k127_1443242_0 COG0513 Superfamily II DNA and RNA helicases K17675 - 3.6.4.13 3.352e-288 912.0
DYD3_k127_1443242_1 Domain of unknown function (DUF4166) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006064 563.0
DYD3_k127_1443242_10 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000000000008301 209.0
DYD3_k127_1443242_11 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000009014 194.0
DYD3_k127_1443242_12 Esterase-like activity of phytase - - - 0.0000000000000000000000000000000000000000000004169 181.0
DYD3_k127_1443242_13 Acyltransferase family - - - 0.00000000000000000000000000000000000000000004301 175.0
DYD3_k127_1443242_14 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.0000000000000000000000000000000000009195 149.0
DYD3_k127_1443242_15 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000009683 147.0
DYD3_k127_1443242_16 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000003233 132.0
DYD3_k127_1443242_17 nuclease - - - 0.00000000000000000000000000000008653 141.0
DYD3_k127_1443242_18 protein conserved in bacteria - - - 0.0000000000000000000000000003251 124.0
DYD3_k127_1443242_19 S4 domain protein K04762 - - 0.00000000000000000001156 106.0
DYD3_k127_1443242_2 Sulfate transporter K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 499.0
DYD3_k127_1443242_20 protein conserved in bacteria - - - 0.000000000000000006295 84.0
DYD3_k127_1443242_21 - - - - 0.0000001149 64.0
DYD3_k127_1443242_22 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0004955 52.0
DYD3_k127_1443242_3 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 474.0
DYD3_k127_1443242_4 Histidine kinase K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 428.0
DYD3_k127_1443242_5 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007385 325.0
DYD3_k127_1443242_6 CarD family K07736 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001256 252.0
DYD3_k127_1443242_7 ankyrin repeat K15503 - - 0.000000000000000000000000000000000000000000000000000000000000000001431 253.0
DYD3_k127_1443242_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000005773 229.0
DYD3_k127_1443242_9 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000002306 229.0
DYD3_k127_1449489_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 513.0
DYD3_k127_1449489_1 Histidine-specific methyltransferase, SAM-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009546 323.0
DYD3_k127_1449489_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000003486 229.0
DYD3_k127_1449489_3 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000133 172.0
DYD3_k127_1449489_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000000001093 159.0
DYD3_k127_1449489_5 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000003291 134.0
DYD3_k127_1449489_6 COG4942 Membrane-bound metallopeptidase - - - 0.00000000001101 72.0
DYD3_k127_1457114_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 521.0
DYD3_k127_1457114_1 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K15581 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 394.0
DYD3_k127_1457114_3 - - - - 0.000000000003393 74.0
DYD3_k127_1457114_4 - - - - 0.00000001288 66.0
DYD3_k127_1509673_0 metallophosphoesterase K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 390.0
DYD3_k127_1509673_1 Transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 324.0
DYD3_k127_1509673_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002423 286.0
DYD3_k127_1509673_3 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000006686 169.0
DYD3_k127_1509673_4 - - - - 0.0000000000000000000000000000000000001828 145.0
DYD3_k127_1509673_5 Domain of unknown function (DUF1906) - - - 0.00000000000000001446 95.0
DYD3_k127_1519112_0 Retinal pigment epithelial membrane protein K11159,K21822 - 1.13.11.82 5.391e-204 647.0
DYD3_k127_1519112_1 Aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003597 568.0
DYD3_k127_1519112_10 Carboxylesterase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004352 248.0
DYD3_k127_1519112_12 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00127 - - 0.00000000000000000000000000000000000000005165 168.0
DYD3_k127_1519112_13 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000001312 159.0
DYD3_k127_1519112_14 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000001872 143.0
DYD3_k127_1519112_15 SnoaL-like domain - - - 0.00000000000000000000000009944 115.0
DYD3_k127_1519112_16 Cytochrome C' - - - 0.00000000000000000007487 98.0
DYD3_k127_1519112_17 SnoaL-like domain - - - 0.00000000000498 76.0
DYD3_k127_1519112_18 - - - - 0.00005332 52.0
DYD3_k127_1519112_2 PFAM sodium alanine symporter K03310 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006623 560.0
DYD3_k127_1519112_3 dioxygenase K11159 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000772 506.0
DYD3_k127_1519112_4 of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 473.0
DYD3_k127_1519112_5 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00124,K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 438.0
DYD3_k127_1519112_6 Amidohydrolase K07045,K14333,K20941 - 4.1.1.103,4.1.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 417.0
DYD3_k127_1519112_7 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 394.0
DYD3_k127_1519112_8 alcohol dehydrogenase K00055 - 1.1.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 384.0
DYD3_k127_1519112_9 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 308.0
DYD3_k127_152461_0 Histidine kinase K13587 - 2.7.13.3 8.067e-195 628.0
DYD3_k127_152461_1 - - - - 0.0000000000000000000000000000000000000000000000000000000005177 215.0
DYD3_k127_152461_2 helix_turn_helix, arabinose operon control protein K07506 - - 0.0000000000000000000000000000000000000843 154.0
DYD3_k127_152461_3 response to abiotic stimulus K06867 - - 0.00000000000000000000000000002169 130.0
DYD3_k127_1537581_0 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 447.0
DYD3_k127_1537581_1 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 304.0
DYD3_k127_1537581_2 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000004734 248.0
DYD3_k127_1537581_3 YMGG-like Gly-zipper - - - 0.0000000000000000000000000004355 122.0
DYD3_k127_1537581_4 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase - - - 0.0000000000000000000000002157 109.0
DYD3_k127_1537581_5 Histidine kinase - - - 0.000000000686 66.0
DYD3_k127_1545006_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1247.0
DYD3_k127_1545006_1 TonB dependent receptor - - - 5.397e-197 635.0
DYD3_k127_1545006_10 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000003722 211.0
DYD3_k127_1545006_11 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000001158 166.0
DYD3_k127_1545006_12 Virulence-associated protein E - - - 0.000000000000000000000000000000000000000000285 173.0
DYD3_k127_1545006_13 - - - - 0.000000000000000000000000000000002174 136.0
DYD3_k127_1545006_14 PFAM restriction endonuclease K07448 - - 0.00000000000000000000000000542 123.0
DYD3_k127_1545006_15 - - - - 0.0000000000000000000000001127 115.0
DYD3_k127_1545006_16 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.000000000000000000000000882 121.0
DYD3_k127_1545006_17 - - - - 0.000000000000000000000001045 110.0
DYD3_k127_1545006_18 protein containing caspase domain - - - 0.00000000000000000000006001 115.0
DYD3_k127_1545006_19 serine-type aminopeptidase activity K02030,K14475 - - 0.00000000000000001164 89.0
DYD3_k127_1545006_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 585.0
DYD3_k127_1545006_20 - - - - 0.0000000000163 77.0
DYD3_k127_1545006_21 PFAM Prophage CP4-57 regulatory - - - 0.00000006275 57.0
DYD3_k127_1545006_22 EF-hand domain K08794,K13412 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009608,GO:0009877,GO:0009931,GO:0009987,GO:0010857,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019538,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564 2.7.11.1,2.7.11.17 0.0001022 55.0
DYD3_k127_1545006_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 398.0
DYD3_k127_1545006_4 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001489 261.0
DYD3_k127_1545006_5 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002826 266.0
DYD3_k127_1545006_6 addiction module antidote protein, CC2985 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001336 265.0
DYD3_k127_1545006_7 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000001703 245.0
DYD3_k127_1545006_8 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000008576 240.0
DYD3_k127_1545006_9 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000000000004893 229.0
DYD3_k127_1584796_0 Conserved carboxylase domain K01571 - 4.1.1.3 3.984e-224 705.0
DYD3_k127_1584796_1 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004963 451.0
DYD3_k127_1584796_2 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009044 333.0
DYD3_k127_1584796_3 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006594 304.0
DYD3_k127_1584796_4 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second K01958 - 6.4.1.1 0.0000001614 58.0
DYD3_k127_1606977_0 PFAM FAD dependent oxidoreductase - - - 2.029e-221 700.0
DYD3_k127_1606977_1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00499,K16319 - 1.14.12.1,1.14.15.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 433.0
DYD3_k127_1606977_2 COG2831 Hemolysin activation secretion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009041 376.0
DYD3_k127_1606977_3 Protein conserved in bacteria - - - 0.0000000000000000000000000000002653 139.0
DYD3_k127_1606977_4 The GLUG motif - - - 0.000000000000000000009545 109.0
DYD3_k127_1606977_5 Prolyl oligopeptidase family - - - 0.00000000000000003141 89.0
DYD3_k127_1649384_0 RHS Repeat - - - 1.057e-252 832.0
DYD3_k127_1649384_1 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 GO:0003674,GO:0003824,GO:0003849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009507,GO:0009536,GO:0009611,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019438,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0050896,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.54 3.14e-213 674.0
DYD3_k127_1649384_10 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 309.0
DYD3_k127_1649384_11 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 294.0
DYD3_k127_1649384_12 COG1192 ATPases involved in chromosome partitioning - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003821 285.0
DYD3_k127_1649384_13 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K00851,K01807 - 2.7.1.12,5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000186 246.0
DYD3_k127_1649384_14 Domain of unknown function (DUF3369) - - - 0.000000000000000000000000000000000000000000000000000000000000000000008343 255.0
DYD3_k127_1649384_15 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000401 238.0
DYD3_k127_1649384_16 Protein of unknown function (DUF1489) - - - 0.00000000000000000000000000000000000000000000000000007244 189.0
DYD3_k127_1649384_17 Type II secretion system (T2SS), protein G K02456 - - 0.000000000000000000000000000000000000000000001108 169.0
DYD3_k127_1649384_18 Phosphoglycolate phosphatase K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000001604 188.0
DYD3_k127_1649384_19 COG3209 Rhs family protein - - - 0.0000000000000000000000000000000000000000000466 171.0
DYD3_k127_1649384_2 COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit K01965,K01968 - 6.4.1.3,6.4.1.4 9.882e-205 661.0
DYD3_k127_1649384_20 Anion-transporting ATPase K03496 - - 0.000000000000000000000000000000006562 141.0
DYD3_k127_1649384_21 Protein of unknown function (DUF2799) - - - 0.000000000000000000000000000004999 128.0
DYD3_k127_1649384_22 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000006825 111.0
DYD3_k127_1649384_23 - - - - 0.000000000000000000000004509 106.0
DYD3_k127_1649384_25 - - - - 0.000000000000000007291 94.0
DYD3_k127_1649384_26 Sporulation domain-containing protein - - - 0.0000000000000004458 84.0
DYD3_k127_1649384_27 - - - - 0.00000000000324 71.0
DYD3_k127_1649384_28 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000001772 65.0
DYD3_k127_1649384_29 - - - - 0.00000002813 65.0
DYD3_k127_1649384_3 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 GO:0000166,GO:0000302,GO:0000305,GO:0003674,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010035,GO:0017076,GO:0019725,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045454,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0065007,GO:0065008,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901700 1.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 601.0
DYD3_k127_1649384_30 RHS Repeat - - - 0.0000007264 58.0
DYD3_k127_1649384_31 - - - - 0.000003436 55.0
DYD3_k127_1649384_32 RHS Repeat - - - 0.000004384 54.0
DYD3_k127_1649384_33 RHS Repeat - - - 0.00004545 51.0
DYD3_k127_1649384_34 Uncharacterized protein conserved in bacteria (DUF2059) - - - 0.00006187 52.0
DYD3_k127_1649384_4 RHS Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006896 579.0
DYD3_k127_1649384_5 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 557.0
DYD3_k127_1649384_6 secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 537.0
DYD3_k127_1649384_7 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 507.0
DYD3_k127_1649384_8 Amidohydrolase K14333,K15063 - 4.1.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006245 460.0
DYD3_k127_1649384_9 type II secretion system protein K02455,K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 359.0
DYD3_k127_1649895_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 0.0 1251.0
DYD3_k127_1649895_1 COG1505 Serine proteases of the peptidase family S9A K01322 - 3.4.21.26 1.535e-261 822.0
DYD3_k127_1649895_10 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000000149 209.0
DYD3_k127_1649895_11 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000001608 179.0
DYD3_k127_1649895_12 MarR family - - - 0.000000000000000000000000000000000000005274 155.0
DYD3_k127_1649895_13 - - - - 0.0000000000000000000000000000000000052 150.0
DYD3_k127_1649895_14 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000008198 114.0
DYD3_k127_1649895_15 SnoaL-like domain - - - 0.00000000000000006076 86.0
DYD3_k127_1649895_16 Lysin motif - - - 0.00000000005087 72.0
DYD3_k127_1649895_17 Protein of unknown function (DUF3298) - - - 0.00000000254 68.0
DYD3_k127_1649895_18 WD-40 repeat K20332 - - 0.000000004801 68.0
DYD3_k127_1649895_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007897 555.0
DYD3_k127_1649895_20 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0002177 44.0
DYD3_k127_1649895_3 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 546.0
DYD3_k127_1649895_4 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 499.0
DYD3_k127_1649895_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008501 390.0
DYD3_k127_1649895_6 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 353.0
DYD3_k127_1649895_7 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000001991 269.0
DYD3_k127_1649895_8 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009218 261.0
DYD3_k127_1649895_9 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000005264 235.0
DYD3_k127_1683134_0 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 1.723e-244 763.0
DYD3_k127_1683134_1 TonB dependent receptor - - - 5.972e-220 707.0
DYD3_k127_1683134_10 - - - - 0.000000000000000001348 98.0
DYD3_k127_1683134_11 DNA excision - - - 0.000007015 53.0
DYD3_k127_1683134_2 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K20034 - 6.2.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 587.0
DYD3_k127_1683134_3 HipA-like C-terminal domain K07154 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 542.0
DYD3_k127_1683134_4 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009056 482.0
DYD3_k127_1683134_5 COG1178 ABC-type Fe3 transport system, permease component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 412.0
DYD3_k127_1683134_6 Iron deficiency-induced protein A K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 342.0
DYD3_k127_1683134_7 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008291 324.0
DYD3_k127_1683134_8 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000000005948 153.0
DYD3_k127_1683134_9 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000001871 106.0
DYD3_k127_1685942_0 FES K03575 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 376.0
DYD3_k127_1685942_1 Cytochrome C' - - - 0.000001059 58.0
DYD3_k127_1699275_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.973e-272 846.0
DYD3_k127_1699275_1 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 573.0
DYD3_k127_1699275_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000001476 200.0
DYD3_k127_1699275_3 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000002069 181.0
DYD3_k127_1699275_4 domain, Protein - - - 0.000000000000000000000000003513 117.0
DYD3_k127_1699275_5 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000007657 101.0
DYD3_k127_1705889_0 Flavin containing amine oxidoreductase K06954 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 558.0
DYD3_k127_1705889_1 cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008393 495.0
DYD3_k127_1705889_2 Tannase and feruloyl esterase K21105 - 3.1.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 479.0
DYD3_k127_1705889_3 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 486.0
DYD3_k127_1705889_4 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 342.0
DYD3_k127_1705889_5 Protein of unknown function (DUF1365) K09701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 301.0
DYD3_k127_1705889_6 ChrR Cupin-like domain K07167 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004107 250.0
DYD3_k127_1705889_7 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000004089 219.0
DYD3_k127_1705889_8 Predicted membrane protein (DUF2177) - - - 0.0000000000000000000000000000000000000000002993 166.0
DYD3_k127_1706762_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1177.0
DYD3_k127_1706762_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071496 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 578.0
DYD3_k127_1706762_2 - - - - 0.00000000000000000000000000000000000000000000000000000000001569 222.0
DYD3_k127_1706762_3 Transposase and inactivated K07492 - - 0.0000000000000000000000000005276 114.0
DYD3_k127_1732590_0 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004776 584.0
DYD3_k127_1732590_1 enoyl-CoA hydratase K13766,K13779 - 4.2.1.18,4.2.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 341.0
DYD3_k127_1732590_2 N-terminal domain of unknown function (DUF4140) - - - 0.000000000000000000000000000000000000000000000000000000000001578 229.0
DYD3_k127_1732590_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000006209 140.0
DYD3_k127_176128_0 DEAD DEAH box helicase K03724 - - 1.453e-207 669.0
DYD3_k127_176128_1 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 375.0
DYD3_k127_176128_2 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008696 353.0
DYD3_k127_176128_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000008514 213.0
DYD3_k127_176128_4 LysE type translocator - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015318,GO:0015711,GO:0015804,GO:0015807,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0042968,GO:0042970,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000000000005253 184.0
DYD3_k127_176128_6 carbonic anhydrase K01674 - 4.2.1.1 0.0000005787 59.0
DYD3_k127_1779744_0 tRNA processing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 420.0
DYD3_k127_1779744_1 UDP-glucose 4-epimerase K01784,K12448 - 5.1.3.2,5.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 392.0
DYD3_k127_1779744_2 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.00000009628 63.0
DYD3_k127_1824024_0 due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1272.0
DYD3_k127_1824024_1 TonB-dependent receptor plug K16090 - - 1.511e-245 780.0
DYD3_k127_1824024_10 Thiamine monophosphate synthase - - - 0.0000000000000000000000000000000005695 140.0
DYD3_k127_1824024_11 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000001662 133.0
DYD3_k127_1824024_13 Lipopolysaccharide-assembly K03643 - - 0.000001624 53.0
DYD3_k127_1824024_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007114 344.0
DYD3_k127_1824024_3 PKHD-type hydroxylase K07336 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009252 326.0
DYD3_k127_1824024_4 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 302.0
DYD3_k127_1824024_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 288.0
DYD3_k127_1824024_6 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001359 243.0
DYD3_k127_1824024_7 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000009792 214.0
DYD3_k127_1824024_8 - - - - 0.0000000000000000000000000000000000000000000000000000002476 203.0
DYD3_k127_1824024_9 Domain of unknown function (DUF3576) - - - 0.0000000000000000000000000000000000003209 146.0
DYD3_k127_183380_0 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 346.0
DYD3_k127_183380_1 transglycosylase - - - 0.000000000000000000000000000000000000002927 161.0
DYD3_k127_183380_2 TadE-like protein K02651 - - 0.0000000000000000000000000000000000001104 149.0
DYD3_k127_183380_3 Peptidase A24A, prepilin type IV K02278 - 3.4.23.43 0.00000000000000000000000000000000002653 143.0
DYD3_k127_183380_4 TadE-like protein - - - 0.0000000000000000000000000000000001077 147.0
DYD3_k127_183380_5 - - - - 0.00000000000000000000000000001876 130.0
DYD3_k127_183380_6 COG4964 Flp pilus assembly protein, secretin CpaC - - - 0.000000000000000000001027 103.0
DYD3_k127_183380_7 Ankyrin repeat - - - 0.00000000000000000003145 99.0
DYD3_k127_183380_8 Flp pilus assembly protein, pilin Flp K02651 - - 0.00000000000000001839 83.0
DYD3_k127_183380_9 - - - - 0.000000008134 67.0
DYD3_k127_1843394_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 563.0
DYD3_k127_1843394_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 535.0
DYD3_k127_1843394_10 Sodium/hydrogen exchanger family K11105 - - 0.000000000000000000000000000000000000000000000000000000000000000007932 235.0
DYD3_k127_1843394_11 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000008225 220.0
DYD3_k127_1843394_12 Protein of unknown function (DUF3500) K02051 - - 0.000000000000000000000000000000000000000000000000000000000366 217.0
DYD3_k127_1843394_13 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000001659 201.0
DYD3_k127_1843394_14 COG3474 Cytochrome c2 K08738 - - 0.0000000000000000000000000000000000000000000001818 175.0
DYD3_k127_1843394_15 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000004091 174.0
DYD3_k127_1843394_16 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000004504 158.0
DYD3_k127_1843394_17 Domain of unknown function (DUF4399) - - - 0.000000000000000000000000000000001565 144.0
DYD3_k127_1843394_18 Protein of unknown function (DUF3703) - - - 0.000000000000000000000000000000002733 147.0
DYD3_k127_1843394_19 - - - - 0.00000000000000000000000000000005029 143.0
DYD3_k127_1843394_2 GtrA-like protein K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007413 460.0
DYD3_k127_1843394_20 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000002112 108.0
DYD3_k127_1843394_21 PilZ domain - - - 0.000000000009821 70.0
DYD3_k127_1843394_24 Membrane - - - 0.000001892 61.0
DYD3_k127_1843394_3 COG3540 Phosphodiesterase alkaline phosphatase D K01077,K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008445 442.0
DYD3_k127_1843394_4 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007669 387.0
DYD3_k127_1843394_6 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 344.0
DYD3_k127_1843394_7 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 303.0
DYD3_k127_1843394_8 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007071 283.0
DYD3_k127_1843394_9 Belongs to the Nudix hydrolase family K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000001646 258.0
DYD3_k127_1884738_0 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 442.0
DYD3_k127_1884738_1 Belongs to the peptidase S1C family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 393.0
DYD3_k127_1884738_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 320.0
DYD3_k127_1884738_3 Transcriptional regulatory protein, C terminal K02483 GO:0000160,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009889,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010468,GO:0010556,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031326,GO:0035556,GO:0042221,GO:0042802,GO:0046688,GO:0048518,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003466 286.0
DYD3_k127_1884738_4 GyrI-like small molecule binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004881 239.0
DYD3_k127_1884738_5 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000000000000000000000003647 196.0
DYD3_k127_1884738_6 TIGRFAM HAD-superfamily subfamily IB hydrolase, TIGR01490 K18697 - 3.1.3.27 0.00000000000000000000000000000000000000008737 159.0
DYD3_k127_1884738_7 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000001343 148.0
DYD3_k127_1884738_8 receptor - - - 0.0000000002005 63.0
DYD3_k127_1884738_9 Acetyltransferases, including N-acetylases of ribosomal proteins K03790 - 2.3.1.128 0.000002095 50.0
DYD3_k127_1892831_0 Dehydrogenase K17760 - 1.1.9.1 1.607e-224 734.0
DYD3_k127_1892831_1 TonB dependent receptor - - - 1.106e-220 724.0
DYD3_k127_1892831_10 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000389 369.0
DYD3_k127_1892831_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 362.0
DYD3_k127_1892831_12 OmpA family K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 336.0
DYD3_k127_1892831_13 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 328.0
DYD3_k127_1892831_14 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 318.0
DYD3_k127_1892831_15 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 306.0
DYD3_k127_1892831_16 Secretion protein K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 302.0
DYD3_k127_1892831_17 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002532 294.0
DYD3_k127_1892831_18 COG1560 Lauroyl myristoyl acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002748 286.0
DYD3_k127_1892831_19 Prolyl 4-hydroxylase alpha subunit homologues. K00472 - 1.14.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003278 289.0
DYD3_k127_1892831_2 Glycosyl transferase family 21 K00694 - 2.4.1.12 9.436e-216 691.0
DYD3_k127_1892831_20 Pfam:Pyridox_oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001478 267.0
DYD3_k127_1892831_21 protein conserved in bacteria K09778 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003693 265.0
DYD3_k127_1892831_22 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000006846 276.0
DYD3_k127_1892831_23 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002802 274.0
DYD3_k127_1892831_24 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000004435 244.0
DYD3_k127_1892831_25 MotA TolQ ExbB proton channel family - - - 0.000000000000000000000000000000000000000000000000000000000000003285 233.0
DYD3_k127_1892831_26 dithiol-disulfide isomerase involved in polyketide biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000003686 220.0
DYD3_k127_1892831_27 Protein tyrosine serine phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000007849 221.0
DYD3_k127_1892831_28 - - - - 0.0000000000000000000000000000000000000000000000000000000000005168 236.0
DYD3_k127_1892831_29 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000001172 213.0
DYD3_k127_1892831_3 COG1132 ABC-type multidrug transport system, ATPase and permease components K02021,K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 540.0
DYD3_k127_1892831_30 Glycosyltransferase, group 2 family protein - - - 0.00000000000000000000000000000000000000000000000000001279 204.0
DYD3_k127_1892831_31 Uncharacterized protein family, UPF0114 - - - 0.00000000000000000000000000000000000000000000000000004247 192.0
DYD3_k127_1892831_32 Exopolysaccharide synthesis, ExoD - - - 0.000000000000000000000000000000000005473 145.0
DYD3_k127_1892831_33 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000002241 134.0
DYD3_k127_1892831_34 Uncharacterized protein conserved in bacteria (DUF2093) - - - 0.000000000000000002139 87.0
DYD3_k127_1892831_35 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000008844 82.0
DYD3_k127_1892831_36 Alkyl sulfatase and related hydrolases - - - 0.00001416 54.0
DYD3_k127_1892831_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 514.0
DYD3_k127_1892831_5 Tannase and feruloyl esterase K21105 - 3.1.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009569 497.0
DYD3_k127_1892831_6 COG1519 3-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009703 426.0
DYD3_k127_1892831_7 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 417.0
DYD3_k127_1892831_8 class II (D K and N) K04568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 402.0
DYD3_k127_1892831_9 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 363.0
DYD3_k127_1968987_0 DNA replication proofreading K02336,K06877 - 2.7.7.7 7.247e-215 690.0
DYD3_k127_1968987_1 RHS Repeat - - - 9.71e-196 649.0
DYD3_k127_1968987_10 Transcriptional regulator - - - 0.0000000000000000000005847 97.0
DYD3_k127_1968987_13 RHS Repeat - - - 0.0000003706 56.0
DYD3_k127_1968987_2 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 556.0
DYD3_k127_1968987_3 Sensory box sensor histidine kinase response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 468.0
DYD3_k127_1968987_4 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006015 444.0
DYD3_k127_1968987_5 COG0500 SAM-dependent methyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 383.0
DYD3_k127_1968987_6 CRISPR associated protein Cas1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 338.0
DYD3_k127_1968987_7 DNA replication proofreading - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003674 273.0
DYD3_k127_1968987_9 Domain of unknown function (DUF4154) - - - 0.00000000000000000000000001563 115.0
DYD3_k127_1981910_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1435.0
DYD3_k127_1981910_1 Transposase - - - 4.56e-199 631.0
DYD3_k127_1981910_2 Type IV secretory pathway VirD2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 468.0
DYD3_k127_1981910_3 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001703 286.0
DYD3_k127_1981910_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07484 - - 0.000000000000000000000000000000000000000000000000000000005377 202.0
DYD3_k127_1981910_5 Uncharacterised protein family (UPF0149) K07039 - - 0.00000000000000000000000000000000000000000653 165.0
DYD3_k127_1981910_6 Type ii secretion system protein e - - - 0.00000000000000002405 88.0
DYD3_k127_1981910_7 Transposase K07483 - - 0.0000000000000004805 82.0
DYD3_k127_1981910_8 TIGRFAM YD repeat protein - - - 0.0002301 52.0
DYD3_k127_1989703_0 Polysaccharide biosynthesis protein K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 553.0
DYD3_k127_1989703_1 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 474.0
DYD3_k127_1989703_2 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 448.0
DYD3_k127_1989703_3 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 392.0
DYD3_k127_1989703_4 COG3980 Spore coat polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004541 292.0
DYD3_k127_1989703_5 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008831,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016491,GO:0016614,GO:0016616,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0045226,GO:0046379,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000004981 265.0
DYD3_k127_1989703_6 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000002582 224.0
DYD3_k127_1989703_7 rRNA (guanine-N2-)-methyltransferase activity - - - 0.0000000000000000000000000003642 123.0
DYD3_k127_1991785_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 8.031e-240 765.0
DYD3_k127_1991785_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008379 496.0
DYD3_k127_1991785_2 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000254 278.0
DYD3_k127_1991785_3 protein conserved in bacteria - - - 0.0000000000000000000000000003444 127.0
DYD3_k127_2004671_0 Heat shock 70 kDa protein K04043 - - 0.0 1020.0
DYD3_k127_2004671_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1020.0
DYD3_k127_2004671_10 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 441.0
DYD3_k127_2004671_11 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000739 435.0
DYD3_k127_2004671_12 COG1702 Phosphate starvation-inducible protein PhoH K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007635 383.0
DYD3_k127_2004671_13 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 368.0
DYD3_k127_2004671_14 Carbohydrate-selective porin K07267 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 372.0
DYD3_k127_2004671_15 sensor histidine kinase response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 368.0
DYD3_k127_2004671_16 COG0477 Permeases of the major facilitator superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 366.0
DYD3_k127_2004671_17 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008669 347.0
DYD3_k127_2004671_18 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 364.0
DYD3_k127_2004671_19 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009378 344.0
DYD3_k127_2004671_2 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 4.074e-242 779.0
DYD3_k127_2004671_20 COG1253 Hemolysins and related proteins containing CBS domains K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006683 314.0
DYD3_k127_2004671_21 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 316.0
DYD3_k127_2004671_22 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 308.0
DYD3_k127_2004671_23 2OG-Fe(II) oxygenase superfamily K03919 - 1.14.11.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008648 291.0
DYD3_k127_2004671_24 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004705 283.0
DYD3_k127_2004671_25 Periplasmic binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002067 287.0
DYD3_k127_2004671_26 Uncharacterized protein conserved in bacteria (DUF2333) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006713 270.0
DYD3_k127_2004671_27 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000001826 261.0
DYD3_k127_2004671_28 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000002489 257.0
DYD3_k127_2004671_29 COG0694 Thioredoxin-like proteins and domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009766 244.0
DYD3_k127_2004671_3 Mg chelatase subunit ChlI K07391 - - 2.197e-213 674.0
DYD3_k127_2004671_30 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000001364 245.0
DYD3_k127_2004671_31 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000000000002571 214.0
DYD3_k127_2004671_32 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000001002 198.0
DYD3_k127_2004671_33 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000005298 200.0
DYD3_k127_2004671_34 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000003569 185.0
DYD3_k127_2004671_35 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000000001286 188.0
DYD3_k127_2004671_36 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000005218 151.0
DYD3_k127_2004671_37 Universal stress protein family - - - 0.0000000000000000000000000000000008864 135.0
DYD3_k127_2004671_38 protein conserved in bacteria K09796 - - 0.0000000000000000000000000000000009851 138.0
DYD3_k127_2004671_39 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000001113 129.0
DYD3_k127_2004671_4 Participates in both transcription termination and antitermination K02600 - - 7.387e-209 662.0
DYD3_k127_2004671_40 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000000000000002839 132.0
DYD3_k127_2004671_41 periplasmic or secreted lipoprotein - - - 0.0000000000000000000000000000004152 131.0
DYD3_k127_2004671_42 Protein of unknown function (DUF2975) - - - 0.0000000000000000000000000000005858 131.0
DYD3_k127_2004671_43 Transcriptional regulator K07727 - - 0.000000000000000000000000000001709 128.0
DYD3_k127_2004671_44 COG1214 Inactive homolog of metal-dependent proteases K01409,K14742 - 2.3.1.234 0.000000000000000000000000000002551 129.0
DYD3_k127_2004671_45 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000004662 117.0
DYD3_k127_2004671_46 regulatory protein TetR - - - 0.00000000000005012 80.0
DYD3_k127_2004671_47 SpoVT / AbrB like domain - - - 0.000001619 54.0
DYD3_k127_2004671_48 In Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system - - - 0.000007165 57.0
DYD3_k127_2004671_49 PAS domain - - - 0.00002409 54.0
DYD3_k127_2004671_5 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 8.404e-198 628.0
DYD3_k127_2004671_6 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006462 591.0
DYD3_k127_2004671_7 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 544.0
DYD3_k127_2004671_8 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 497.0
DYD3_k127_2004671_9 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 456.0
DYD3_k127_2009644_0 Threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 346.0
DYD3_k127_2009644_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005973 349.0
DYD3_k127_2009644_2 Iron-containing redox enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 303.0
DYD3_k127_2009644_3 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000003774 267.0
DYD3_k127_2009644_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000004217 231.0
DYD3_k127_2009644_5 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000001191 209.0
DYD3_k127_2009644_6 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000002311 198.0
DYD3_k127_2009644_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000007885 147.0
DYD3_k127_2009644_8 SnoaL-like domain - - - 0.00000000000000000002131 105.0
DYD3_k127_2009644_9 Bacterial regulatory proteins, tetR family - - - 0.00002785 54.0
DYD3_k127_2019356_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 517.0
DYD3_k127_2019356_1 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 468.0
DYD3_k127_2019356_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 404.0
DYD3_k127_2019356_3 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000673 356.0
DYD3_k127_2019356_4 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 295.0
DYD3_k127_2019356_5 Di-haem cytochrome c peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001308 265.0
DYD3_k127_2019356_6 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000003248 186.0
DYD3_k127_2019356_7 Trp repressor protein - - - 0.00000000000000000000000000002146 121.0
DYD3_k127_2057896_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 6.679e-283 881.0
DYD3_k127_2057896_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 388.0
DYD3_k127_2057896_2 ATPases involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 328.0
DYD3_k127_2057896_3 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 322.0
DYD3_k127_2057896_4 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000002037 175.0
DYD3_k127_2057896_5 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000003497 130.0
DYD3_k127_2102814_0 Serine aminopeptidase, S33 - - - 4.916e-227 711.0
DYD3_k127_2102814_1 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 601.0
DYD3_k127_2102814_2 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 349.0
DYD3_k127_2102814_3 glucose sorbosone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000405 314.0
DYD3_k127_2102814_4 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 295.0
DYD3_k127_2102814_5 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.000000000000000000000000000000000000000000000000000000000000000001717 231.0
DYD3_k127_2102814_6 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.000000000000000000000000000000000000000000000000000000000000267 229.0
DYD3_k127_2102814_7 Class II Aldolase and Adducin N-terminal domain K03077 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0008150,GO:0008152,GO:0008270,GO:0008742,GO:0009056,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019752,GO:0019852,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046872,GO:0046914,GO:0051186,GO:0071704,GO:1901575 5.1.3.4 0.000000000000000000000000000000000004654 141.0
DYD3_k127_2102814_9 - - - - 0.0001691 49.0
DYD3_k127_2136317_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 462.0
DYD3_k127_2136317_1 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009303 343.0
DYD3_k127_2136317_2 Protein of unknown function (DUF3667) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004028 263.0
DYD3_k127_2136317_3 Stringent starvation protein B K09985 - - 0.0000000000000000000000000000000000000000000000000004369 190.0
DYD3_k127_2136317_4 Uncharacterized protein family UPF0016 - - - 0.0000000000000000005667 91.0
DYD3_k127_2136317_5 Glyoxalase-like domain - - - 0.000000000003316 74.0
DYD3_k127_2136317_6 Transposase DDE domain - - - 0.0000001375 53.0
DYD3_k127_2136317_7 - - - - 0.0003133 43.0
DYD3_k127_21694_0 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 568.0
DYD3_k127_21694_1 COG1134 ABC-type polysaccharide polyol phosphate transport system, ATPase component K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 475.0
DYD3_k127_21694_10 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000005755 146.0
DYD3_k127_21694_11 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000007374 64.0
DYD3_k127_21694_12 Mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.00000000313 68.0
DYD3_k127_21694_2 Nucleotidyl transferase K00978 - 2.7.7.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 432.0
DYD3_k127_21694_3 ABC-2 type transporter K09690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 384.0
DYD3_k127_21694_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 361.0
DYD3_k127_21694_5 Glycosyltransferase like family 2 K16562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 323.0
DYD3_k127_21694_6 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 299.0
DYD3_k127_21694_7 Glycosyl transferase family 8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 300.0
DYD3_k127_21694_8 COG2942 N-acyl-D-glucosamine 2-epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001715 290.0
DYD3_k127_21694_9 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000005288 228.0
DYD3_k127_2189831_0 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.00000000001888 74.0
DYD3_k127_2189831_1 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.000000215 60.0
DYD3_k127_2200901_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 1.055e-262 822.0
DYD3_k127_2200901_1 COG0330 Membrane protease subunits, stomatin prohibitin homologs - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 342.0
DYD3_k127_2200901_2 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001037 255.0
DYD3_k127_2200901_3 Peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000206 216.0
DYD3_k127_2200901_4 COG1585 Membrane protein implicated in regulation of membrane protease activity K07340 - - 0.0000000000000000000000000007224 119.0
DYD3_k127_2200901_5 - - - - 0.000000000000000000000002863 105.0
DYD3_k127_2233888_0 N-methylhydantoinase A acetone carboxylase, beta subunit K01469 - 3.5.2.9 0.0 1367.0
DYD3_k127_2233888_1 in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence K15738 - - 1.752e-284 887.0
DYD3_k127_2233888_10 COG2200 FOG EAL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002677 267.0
DYD3_k127_2233888_11 molecular chaperone K05801 - - 0.00000000000000000000000000000000000000000000000000000000000000000008106 241.0
DYD3_k127_2233888_12 COG2853 Surface lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000001293 211.0
DYD3_k127_2233888_13 Polycystin cation channel K08714 - - 0.0000000000000000000000000000000000000000000000000000002532 204.0
DYD3_k127_2233888_14 Putative ATP-dependant zinc protease - - - 0.000000000000000000000000000000000000000000000001521 189.0
DYD3_k127_2233888_15 MlaC protein K07323 - - 0.000000000000000000000000000000000000000000000001707 181.0
DYD3_k127_2233888_16 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000245 168.0
DYD3_k127_2233888_17 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000000002839 158.0
DYD3_k127_2233888_18 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000000000000004053 152.0
DYD3_k127_2233888_19 Thiol disulfide interchange protein K02199 - - 0.00000000000000000000000000000000004349 136.0
DYD3_k127_2233888_2 Belongs to the IlvD Edd family K01690 - 4.2.1.12 4.862e-262 820.0
DYD3_k127_2233888_20 Cytochrome c-type biogenesis protein K02200 - - 0.0000000000000000000000000000001914 141.0
DYD3_k127_2233888_3 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.737e-214 675.0
DYD3_k127_2233888_4 Belongs to the RimK family K05844,K14940 - 6.3.2.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 464.0
DYD3_k127_2233888_5 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 420.0
DYD3_k127_2233888_6 succinylglutamate desuccinylase K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006028 410.0
DYD3_k127_2233888_7 transcriptional - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007741 378.0
DYD3_k127_2233888_8 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily K15268 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002014 280.0
DYD3_k127_2233888_9 Phenazine biosynthesis protein PhzF K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000004369 251.0
DYD3_k127_2258612_0 COG0209 Ribonucleotide reductase, alpha subunit K00525 - 1.17.4.1 0.0 1533.0
DYD3_k127_2258612_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 8.145e-293 910.0
DYD3_k127_2258612_10 Uncharacterized protein conserved in bacteria (DUF2155) - - - 0.00000000000000000000000000000000003046 146.0
DYD3_k127_2258612_11 Involved in resistance to organic solvents, periplasmic component K02067 - - 0.0000000000000000000000000000000005403 136.0
DYD3_k127_2258612_12 Pentapeptide repeat protein - - - 0.0000000000000000000000000001988 132.0
DYD3_k127_2258612_13 - - - - 0.0000000000000000000001057 114.0
DYD3_k127_2258612_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.49e-277 864.0
DYD3_k127_2258612_3 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 599.0
DYD3_k127_2258612_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004199 494.0
DYD3_k127_2258612_5 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004443 460.0
DYD3_k127_2258612_6 Ppx GppA K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 375.0
DYD3_k127_2258612_7 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 289.0
DYD3_k127_2258612_8 NADH ubiquinone oxidoreductase 17.2 kD subunit K00356 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000002379 200.0
DYD3_k127_2258612_9 Ubiquinol-cytochrome C reductase - - - 0.000000000000000000000000000000000000000000000000000003217 198.0
DYD3_k127_2299950_0 Sodium proton antiporter, NhaD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005518 577.0
DYD3_k127_2299950_1 PFAM IS1 transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 373.0
DYD3_k127_2299950_10 - - - - 0.000000000000000764 81.0
DYD3_k127_2299950_11 Protein of unknown function (DUF1192) - - - 0.0000002088 55.0
DYD3_k127_2299950_12 WD-40 repeat - - - 0.0000003265 64.0
DYD3_k127_2299950_2 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 383.0
DYD3_k127_2299950_3 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 315.0
DYD3_k127_2299950_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009052 304.0
DYD3_k127_2299950_5 Sodium/hydrogen exchanger family K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 301.0
DYD3_k127_2299950_6 Protein of unknown function (DUF1013) K09987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002544 259.0
DYD3_k127_2299950_7 Methyltransferase K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000000000000000001184 251.0
DYD3_k127_2299950_8 Regulator of CtrA degradation K13592 - - 0.0000000000000000000000000000000000000005685 154.0
DYD3_k127_2299950_9 Protein of unknown function (DUF559) - - - 0.000000000000000000000005645 106.0
DYD3_k127_2326988_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 4.779e-240 753.0
DYD3_k127_2326988_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 2.83e-209 664.0
DYD3_k127_2326988_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 446.0
DYD3_k127_2326988_3 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 422.0
DYD3_k127_2337815_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 2.999e-233 733.0
DYD3_k127_2337815_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 1.097e-214 672.0
DYD3_k127_2337815_2 BlaR1 peptidase M56 - - - 0.0000000000000000000000000000000000000000002129 181.0
DYD3_k127_2337815_3 Transcriptional regulator - - - 0.00000000000000000000000000000000000000004089 155.0
DYD3_k127_2337815_4 Glyoxalase-like domain K06996 - - 0.00000000000000000000000000000000000002287 148.0
DYD3_k127_2337815_5 transcription activator, effector binding K13652 - - 0.00000000000000000000000000000003177 137.0
DYD3_k127_2337815_6 - - - - 0.000000003661 68.0
DYD3_k127_2387284_0 Domain of unknown function (DUF4175) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 523.0
DYD3_k127_2387284_1 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 445.0
DYD3_k127_2387284_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000004472 239.0
DYD3_k127_2387284_3 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000004675 218.0
DYD3_k127_2387284_4 Domain of unknown function (DUF1476) - - - 0.000000000000000000000000000000000000000002564 161.0
DYD3_k127_2387284_5 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000002886 166.0
DYD3_k127_2387284_6 Toxic component of a toxin-antitoxin (TA) module. An RNase K07062 - - 0.0000000000000000000000000000001662 128.0
DYD3_k127_2387284_7 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000009075 107.0
DYD3_k127_2387284_8 - - - - 0.00000000000000000005897 99.0
DYD3_k127_2387284_9 plasmid stabilization protein K21495 - - 0.0000000000401 68.0
DYD3_k127_2419869_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 4.952e-231 721.0
DYD3_k127_2419869_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 498.0
DYD3_k127_2419869_2 membrane metal-binding protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005635 321.0
DYD3_k127_2419869_3 PFAM Integrase catalytic region - - - 0.00000000000000000001116 96.0
DYD3_k127_2424202_0 TonB-dependent receptor K02014 - - 0.0 1123.0
DYD3_k127_2424202_1 to be involved in C-type cytochrome biogenesis K04084 - 1.8.1.8 1.763e-198 655.0
DYD3_k127_2424202_2 Purine nucleoside permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 533.0
DYD3_k127_2424202_3 ABC transporter K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 468.0
DYD3_k127_2424202_4 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 392.0
DYD3_k127_2424202_5 SapC - - - 0.00000000000000000000000000000000000000000000000000000000000000000005889 240.0
DYD3_k127_2424202_6 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000003436 194.0
DYD3_k127_2424202_7 phosphorylase K01243 - 3.2.2.9 0.000000000000000000000000000000000181 144.0
DYD3_k127_2424202_8 Belongs to the Fur family K09823 - - 0.00000000000000000000000000001002 125.0
DYD3_k127_2424202_9 Thioesterase K07107 - - 0.00000003493 64.0
DYD3_k127_2425603_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 442.0
DYD3_k127_2425603_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 443.0
DYD3_k127_2425603_2 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 375.0
DYD3_k127_2425603_3 Dicarboxylate transport - - - 0.0000000000000000000000000000000000000000000000000001709 213.0
DYD3_k127_2425603_4 COG0642 Signal transduction histidine kinase K13588 - - 0.000000000000000000000000000004446 122.0
DYD3_k127_2425603_5 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000003157 87.0
DYD3_k127_2425603_6 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.0000000000000002271 83.0
DYD3_k127_2425603_7 YnbE-like lipoprotein - - - 0.0000000000000002306 82.0
DYD3_k127_2425603_8 - - - - 0.000005036 56.0
DYD3_k127_2425603_9 Amine metabolic protein ydbL K09978 - - 0.000417 49.0
DYD3_k127_2445037_0 Outer membrane receptor - - - 0.0 1217.0
DYD3_k127_2445037_1 Peptidase family M13 K07386 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 486.0
DYD3_k127_2445037_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000518 94.0
DYD3_k127_2445037_11 de-polymerase K05973 - 3.1.1.75 0.0000000000000001734 87.0
DYD3_k127_2445037_13 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.000001047 59.0
DYD3_k127_2445037_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 474.0
DYD3_k127_2445037_3 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 466.0
DYD3_k127_2445037_4 N-carbamoylputrescine amidase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 428.0
DYD3_k127_2445037_5 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009664 393.0
DYD3_k127_2445037_6 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 351.0
DYD3_k127_2445037_7 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 306.0
DYD3_k127_2445037_8 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006901 301.0
DYD3_k127_2445037_9 S-adenosylmethionine decarboxylase K00797,K01611 - 2.5.1.16,4.1.1.50 0.0000000000000000000000000000000000000000000000001388 184.0
DYD3_k127_2522036_0 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 501.0
DYD3_k127_2522036_1 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 305.0
DYD3_k127_2522036_2 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 300.0
DYD3_k127_2522036_3 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001251 279.0
DYD3_k127_2522036_4 phosphoserine phosphatase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000486 258.0
DYD3_k127_2522036_5 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000009801 152.0
DYD3_k127_2522036_6 - - - - 0.000000000000000004067 93.0
DYD3_k127_2522036_7 Predicted membrane protein (DUF2306) - - - 0.00000000000000003358 89.0
DYD3_k127_2524067_0 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003457 370.0
DYD3_k127_2524067_1 COG1651 Protein-disulfide isomerase - - - 0.00000000000000000000000000000000000000000000000000001976 198.0
DYD3_k127_2524067_2 Protein of unknown function (DUF721) - - - 0.00000000000000000000007825 105.0
DYD3_k127_2526048_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1025.0
DYD3_k127_2526048_1 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 575.0
DYD3_k127_2526048_2 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 419.0
DYD3_k127_2526048_3 phosphate-selective porin K07221 - - 0.00000000000000000000000000000000000000000000000000000000000314 222.0
DYD3_k127_2526048_4 Type II secretion system (T2SS), protein N K02463 - - 0.00000000000000000000003357 113.0
DYD3_k127_2526048_5 - - - - 0.000000000000000002506 91.0
DYD3_k127_2526048_6 COG3297 Type II secretory pathway, component PulL K02461 - - 0.000000000000003439 80.0
DYD3_k127_2526048_7 Type II secretion system (T2SS), protein M K02462 - - 0.0000000000003349 79.0
DYD3_k127_25421_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 347.0
DYD3_k127_25421_1 Methyltransferase - - - 0.00000000000000000000000000000002376 140.0
DYD3_k127_2547122_0 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 421.0
DYD3_k127_2547122_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019 - 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 388.0
DYD3_k127_2547122_10 LytTr DNA-binding - - - 0.0000000000000001997 89.0
DYD3_k127_2547122_2 depolymerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 386.0
DYD3_k127_2547122_3 Transposase and inactivated K07494 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 310.0
DYD3_k127_2547122_4 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002049 271.0
DYD3_k127_2547122_5 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000103 271.0
DYD3_k127_2547122_6 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000001958 233.0
DYD3_k127_2547122_7 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000019 205.0
DYD3_k127_2547122_8 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000003033 196.0
DYD3_k127_2547122_9 'Paired box' domain K07499 - - 0.00000000000000000000128 99.0
DYD3_k127_2554110_0 NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006949 403.0
DYD3_k127_2554110_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 346.0
DYD3_k127_2554110_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008697 278.0
DYD3_k127_2554110_3 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009832 254.0
DYD3_k127_2554110_4 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000001534 236.0
DYD3_k127_2554110_5 - - - - 0.00000000000000000000000000000000000000000000001743 188.0
DYD3_k127_2554110_6 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.22 0.0000000000000000161 82.0
DYD3_k127_2554384_0 adhes_NPXG filamentous hemagglutinin family N-terminal domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 526.0
DYD3_k127_2554384_1 Polypeptide-transport-associated domain protein ShlB-type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 470.0
DYD3_k127_2554384_2 COG2217 Cation transport ATPase K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000001351 190.0
DYD3_k127_2554384_3 PFAM nitrogen-fixing NifU domain protein - - - 0.00000000000000000000000000000000000409 142.0
DYD3_k127_2554384_4 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.22 0.000000000000000009392 83.0
DYD3_k127_2554384_5 Domain of unknown function (DUF4347) - - - 0.0003431 55.0
DYD3_k127_2566187_1 Ankyrin repeats (3 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 359.0
DYD3_k127_2566187_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000007547 229.0
DYD3_k127_2566187_3 SnoaL-like domain - - - 0.0000421 55.0
DYD3_k127_2601505_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009518 578.0
DYD3_k127_2601505_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000379 186.0
DYD3_k127_2601505_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000002109 173.0
DYD3_k127_2601505_3 Protein of unknown function (DUF2948) - - - 0.000000000000000000000000000000000255 137.0
DYD3_k127_2640270_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001429 280.0
DYD3_k127_2640270_1 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000001388 223.0
DYD3_k127_2640270_2 Tetratricopeptide repeat - - - 0.000000000000000000000005645 112.0
DYD3_k127_2655403_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1e-322 994.0
DYD3_k127_2655403_1 methyl-accepting chemotaxis K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006467 526.0
DYD3_k127_2655403_10 TspO/MBR family K05770 - - 0.00000000000000000000000000000000000000000000000000000006018 205.0
DYD3_k127_2655403_11 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000001028 216.0
DYD3_k127_2655403_12 Transcriptional regulator K07506 - - 0.000000000000000000000000000000000000000000000000001314 194.0
DYD3_k127_2655403_13 PepSY-associated TM helix - - - 0.000000000000000000000000000000000000000000000000003626 207.0
DYD3_k127_2655403_14 CHAD - - - 0.0000000000000000001183 100.0
DYD3_k127_2655403_15 - - - - 0.00000000001457 76.0
DYD3_k127_2655403_16 - - - - 0.00000002368 66.0
DYD3_k127_2655403_17 COG0457 FOG TPR repeat - - - 0.00004786 56.0
DYD3_k127_2655403_2 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 504.0
DYD3_k127_2655403_3 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259 387.0
DYD3_k127_2655403_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008143 320.0
DYD3_k127_2655403_5 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001444 259.0
DYD3_k127_2655403_6 protein-(glutamine-N5) methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003574 276.0
DYD3_k127_2655403_7 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000005007 249.0
DYD3_k127_2655403_8 Protein of unknown function (DUF1134) - - - 0.000000000000000000000000000000000000000000000000000000000000003375 224.0
DYD3_k127_2655403_9 Protein of unknown function (DUF1134) - - - 0.000000000000000000000000000000000000000000000000000000000004984 214.0
DYD3_k127_2658800_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 471.0
DYD3_k127_2658800_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0000000000000000000000000000000000000000000000000000001048 210.0
DYD3_k127_2658800_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000000007096 86.0
DYD3_k127_2698549_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 7.12e-249 794.0
DYD3_k127_2698549_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 463.0
DYD3_k127_2698549_2 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000008711 116.0
DYD3_k127_2698549_3 - - - - 0.000000001619 71.0
DYD3_k127_2701055_0 Phosphate transport system permease K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 554.0
DYD3_k127_2701055_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 490.0
DYD3_k127_2701055_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005711 432.0
DYD3_k127_2701055_3 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 375.0
DYD3_k127_2701055_4 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 312.0
DYD3_k127_2701055_5 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002209 276.0
DYD3_k127_2701055_6 PFAM GcrA cell cycle regulator K13583 - - 0.00000000000000000000000000000000000000000000000000000000000003759 220.0
DYD3_k127_2701055_7 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000002802 134.0
DYD3_k127_2701055_8 Limonene-1,2-epoxide hydrolase K10533 - 3.3.2.8 0.000001398 59.0
DYD3_k127_2703324_0 Uncharacterized protein family (UPF0051) - - - 2.327e-207 647.0
DYD3_k127_2703324_1 ATPase activity K09013 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 370.0
DYD3_k127_2703324_2 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 310.0
DYD3_k127_2703324_3 plasmid stabilization - - - 0.00000004483 60.0
DYD3_k127_2727925_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 1749.0
DYD3_k127_2727925_1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1216.0
DYD3_k127_2727925_2 A predicted alpha-helical domain with a conserved ER motif. - - - 3.97e-312 975.0
DYD3_k127_2727925_3 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 349.0
DYD3_k127_2727925_4 - - - - 0.00001132 51.0
DYD3_k127_2742518_0 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 6.219e-214 686.0
DYD3_k127_2742518_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.411e-200 635.0
DYD3_k127_2742518_10 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000156 183.0
DYD3_k127_2742518_11 Response regulator receiver K02485 - - 0.000000000000000000000000000000000000000003777 167.0
DYD3_k127_2742518_12 Domain of unknown function (DUF427) - - - 0.000000000000000000000000000000000000001026 156.0
DYD3_k127_2742518_13 Putative restriction endonuclease - - - 0.000000000000000000000000000004977 126.0
DYD3_k127_2742518_14 - - - - 0.0000000000000006785 83.0
DYD3_k127_2742518_15 - - - - 0.000000000008427 71.0
DYD3_k127_2742518_16 - - - - 0.00002366 51.0
DYD3_k127_2742518_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 445.0
DYD3_k127_2742518_3 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 385.0
DYD3_k127_2742518_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 338.0
DYD3_k127_2742518_5 RQC K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 335.0
DYD3_k127_2742518_6 Polyphosphate kinase 2 (PPK2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006892 357.0
DYD3_k127_2742518_7 tRNA rRNA methyltransferase SpoU K02533 - - 0.0000000000000000000000000000000000000000000000000000000000000002217 230.0
DYD3_k127_2742518_8 epimerase - - - 0.00000000000000000000000000000000000000000000005599 181.0
DYD3_k127_2742518_9 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000000000002872 169.0
DYD3_k127_2747129_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.827e-231 724.0
DYD3_k127_2747129_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 8.166e-201 634.0
DYD3_k127_2747129_10 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003198 269.0
DYD3_k127_2747129_11 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000002273 245.0
DYD3_k127_2747129_12 exopolysaccharide production protein ExoZ - - - 0.0000000000000000000000000000000000000000000000000000000000000004444 233.0
DYD3_k127_2747129_13 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000009437 216.0
DYD3_k127_2747129_14 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000007206 216.0
DYD3_k127_2747129_15 COG2821 Membrane-bound lytic murein transglycosylase K08304 - - 0.0000000000000000000000000000000000000000000000000000000004998 227.0
DYD3_k127_2747129_16 dioxygenase of extradiol dioxygenase family K06991 - - 0.000000000000000000000000000000000000000000000000000000001508 203.0
DYD3_k127_2747129_17 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000005776 215.0
DYD3_k127_2747129_18 Uncharacterised protein family (UPF0093) K08973 - - 0.000000000000000000000000000000000000000000000000000003941 202.0
DYD3_k127_2747129_19 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000006954 192.0
DYD3_k127_2747129_2 Glutathione S-transferase, C-terminal domain K07393 GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016491,GO:0016667,GO:0016672,GO:0016740,GO:0016765,GO:0042221,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 459.0
DYD3_k127_2747129_20 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 GO:0002790,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000000000000000000000000000000002995 180.0
DYD3_k127_2747129_21 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000005912 183.0
DYD3_k127_2747129_22 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000125 167.0
DYD3_k127_2747129_3 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 460.0
DYD3_k127_2747129_4 Trypsin-like serine protease K04775 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 437.0
DYD3_k127_2747129_5 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 415.0
DYD3_k127_2747129_6 COG0524 Sugar kinases, ribokinase family K00847,K00856 - 2.7.1.20,2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 370.0
DYD3_k127_2747129_7 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 351.0
DYD3_k127_2747129_8 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 349.0
DYD3_k127_2747129_9 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002117 280.0
DYD3_k127_2787821_0 von Willebrand factor (vWF) type A domain K07114 - - 8.291e-219 702.0
DYD3_k127_2787821_1 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 501.0
DYD3_k127_2787821_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18298,K18901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001605 280.0
DYD3_k127_2787821_11 ATP-binding protein K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000001212 254.0
DYD3_k127_2787821_12 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000002922 213.0
DYD3_k127_2787821_13 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000697 166.0
DYD3_k127_2787821_14 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.00000000000000000000000000000000000000001113 172.0
DYD3_k127_2787821_15 cheY-homologous receiver domain - - - 0.00000000000000000000000001814 114.0
DYD3_k127_2787821_16 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division - - - 0.000000000000000000000002512 118.0
DYD3_k127_2787821_17 Protein of unknown function (DUF3325) - - - 0.000000000006596 71.0
DYD3_k127_2787821_18 - - - - 0.0000007346 55.0
DYD3_k127_2787821_2 PFAM alpha beta hydrolase K00433 - 1.11.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 487.0
DYD3_k127_2787821_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 421.0
DYD3_k127_2787821_4 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 392.0
DYD3_k127_2787821_5 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 346.0
DYD3_k127_2787821_6 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 338.0
DYD3_k127_2787821_7 Transporter, hydrophobe amphiphile efflux-1 (HAE1) family K18902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 330.0
DYD3_k127_2787821_8 PepSY-associated TM region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 299.0
DYD3_k127_2787821_9 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000245 276.0
DYD3_k127_2798855_0 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 441.0
DYD3_k127_2798855_1 Plays a role in the flagellum-specific transport system K02419 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 321.0
DYD3_k127_2798855_2 methyltransferase K09846 - 2.1.1.210 0.0000000000000000000000000000000000000000000000000000001098 198.0
DYD3_k127_2798855_3 Belongs to the flagella basal body rod proteins family K02388 GO:0005575,GO:0005623,GO:0009288,GO:0009425,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464 - 0.0000000000000000000000000000000000000000000000000008603 186.0
DYD3_k127_2798855_4 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.0000000000000000000000000000003059 127.0
DYD3_k127_2798855_5 COG1677 Flagellar hook-basal body protein K02408 - - 0.00000000000000000004362 93.0
DYD3_k127_2798855_6 flagellar K02418 - - 0.00000000000000009918 85.0
DYD3_k127_2802535_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 - 4.1.1.98 1.291e-268 880.0
DYD3_k127_2802535_1 Alcohol dehydrogenase GroES-like domain K00121 - 1.1.1.1,1.1.1.284 3.723e-202 637.0
DYD3_k127_2802535_10 - - - - 0.000000000000000000000000000000000000000000000000000000001247 211.0
DYD3_k127_2802535_11 endonuclease III K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000004022 207.0
DYD3_k127_2802535_12 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000002054 181.0
DYD3_k127_2802535_13 Low temperature requirement A - - - 0.00000000000000000000000000000000000000005362 168.0
DYD3_k127_2802535_14 Plasmid stabilization system - - - 0.00000000000000000000000000000000002959 138.0
DYD3_k127_2802535_15 Acetyltransferase K06975 - - 0.0000000000000000000000000000000001306 135.0
DYD3_k127_2802535_16 - - - - 0.000000000000000006095 98.0
DYD3_k127_2802535_17 positive regulation of growth K07746 - - 0.000000000000000007392 88.0
DYD3_k127_2802535_18 GCN5-related N-acetyl-transferase K06975 - - 0.00000000000000001185 87.0
DYD3_k127_2802535_19 - - - - 0.000001519 59.0
DYD3_k127_2802535_2 amino acid K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 576.0
DYD3_k127_2802535_20 - - - - 0.0000323 51.0
DYD3_k127_2802535_21 Belongs to the UPF0337 (CsbD) family - - - 0.00008185 48.0
DYD3_k127_2802535_3 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 379.0
DYD3_k127_2802535_4 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 340.0
DYD3_k127_2802535_5 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 335.0
DYD3_k127_2802535_6 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179,K06125 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 308.0
DYD3_k127_2802535_7 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007981 263.0
DYD3_k127_2802535_8 Bacterial low temperature requirement A protein (LtrA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001301 256.0
DYD3_k127_2802535_9 Uncharacterized protein conserved in bacteria (DUF2199) - - - 0.0000000000000000000000000000000000000000000000000000000008968 206.0
DYD3_k127_2803795_0 Iron-sulfur cluster assembly protein K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 323.0
DYD3_k127_2803795_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000008873 230.0
DYD3_k127_2803795_2 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000004216 201.0
DYD3_k127_2803795_3 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000001654 176.0
DYD3_k127_2803795_4 DinB superfamily - - - 0.00000000000000000000000000000000000000000006357 178.0
DYD3_k127_2803795_5 nucleotidyltransferase activity - - - 0.000000000000000000000000000000000001018 150.0
DYD3_k127_2803795_6 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000000000001098 108.0
DYD3_k127_2831971_0 FAD binding domain - - - 3.276e-227 730.0
DYD3_k127_2831971_1 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 1.286e-206 655.0
DYD3_k127_2831971_10 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009675 323.0
DYD3_k127_2831971_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 327.0
DYD3_k127_2831971_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000863 300.0
DYD3_k127_2831971_13 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001089 273.0
DYD3_k127_2831971_14 rrna methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006175 269.0
DYD3_k127_2831971_15 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000001904 223.0
DYD3_k127_2831971_16 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000008176 224.0
DYD3_k127_2831971_17 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000000000000000000000000000000000000000000001371 190.0
DYD3_k127_2831971_18 invasion associated locus B - - - 0.00000000000000000000000000000000000002591 153.0
DYD3_k127_2831971_19 Domain of unknown function (DU1801) - - - 0.00000000000000000000000002472 113.0
DYD3_k127_2831971_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 584.0
DYD3_k127_2831971_20 Domain of Unknown Function (DUF350) K08989 - - 0.0000000000000000000000002434 112.0
DYD3_k127_2831971_21 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000000000000005822 94.0
DYD3_k127_2831971_22 - - - - 0.0000000000000000004475 94.0
DYD3_k127_2831971_23 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000111 87.0
DYD3_k127_2831971_25 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000000009018 71.0
DYD3_k127_2831971_26 - - - - 0.0001219 51.0
DYD3_k127_2831971_3 Heparinase II/III-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003457 528.0
DYD3_k127_2831971_4 COG3540 Phosphodiesterase alkaline phosphatase D K01077,K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 486.0
DYD3_k127_2831971_5 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008614 420.0
DYD3_k127_2831971_6 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 416.0
DYD3_k127_2831971_7 Polysaccharide biosynthesis protein K13013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 408.0
DYD3_k127_2831971_8 PFAM Patatin K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006624 362.0
DYD3_k127_2831971_9 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 332.0
DYD3_k127_2883463_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 1.888e-212 668.0
DYD3_k127_2883463_1 PAS domain - - - 6.95e-209 667.0
DYD3_k127_2883463_10 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000245 280.0
DYD3_k127_2883463_11 cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000397 269.0
DYD3_k127_2883463_12 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000002042 217.0
DYD3_k127_2883463_13 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000222 209.0
DYD3_k127_2883463_14 Cell division protein K09811 - - 0.0000000000000000000000000000000000000000000000000003497 201.0
DYD3_k127_2883463_15 YCII-related domain - - - 0.000000000000000000000000000000000000000000000001634 179.0
DYD3_k127_2883463_16 glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.0000000000000000000000000000000000000000000001076 175.0
DYD3_k127_2883463_17 Subtilase family - - - 0.000000000000000000000000000000000000000000000229 184.0
DYD3_k127_2883463_18 DUF218 domain - - - 0.0000000000000000000000000000000000000000003018 165.0
DYD3_k127_2883463_19 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000001316 157.0
DYD3_k127_2883463_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 5.283e-204 641.0
DYD3_k127_2883463_20 lyase activity - - - 0.00000000000000000000000000000000000007116 147.0
DYD3_k127_2883463_21 Helix-turn-helix K21498 - - 0.00000000000000000000000000000000008864 134.0
DYD3_k127_2883463_22 Metal-sensitive transcriptional repressor K21600 - - 0.00000000000000000000000000000000242 130.0
DYD3_k127_2883463_23 zinc-ribbon domain - - - 0.00000000000000000000000000000391 128.0
DYD3_k127_2883463_24 pentaerythritol trinitrate reductase activity K00354 - 1.6.99.1 0.00000000000000000000000000001075 123.0
DYD3_k127_2883463_25 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000003019 110.0
DYD3_k127_2883463_26 - - - - 0.00000000000000000002965 100.0
DYD3_k127_2883463_27 AntiSigma factor - - - 0.000000000000000003291 94.0
DYD3_k127_2883463_28 helix_turn_helix, arabinose operon control protein K13652,K13653 - - 0.00000000000000009237 88.0
DYD3_k127_2883463_29 Belongs to the UPF0758 family K03630 - - 0.000000000000002824 77.0
DYD3_k127_2883463_3 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000719 582.0
DYD3_k127_2883463_30 Uncharacterized protein conserved in bacteria (DUF2125) - - - 0.000000000000668 79.0
DYD3_k127_2883463_32 - - - - 0.000000002665 65.0
DYD3_k127_2883463_33 copper resistance - - - 0.000000005709 66.0
DYD3_k127_2883463_34 Peptidoglycan-binding domain 1 protein - - - 0.000001302 61.0
DYD3_k127_2883463_4 copper resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 477.0
DYD3_k127_2883463_5 Transporter associated domain K03699 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 436.0
DYD3_k127_2883463_6 VirC1 protein K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006006 380.0
DYD3_k127_2883463_7 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 369.0
DYD3_k127_2883463_8 Arac family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 340.0
DYD3_k127_2883463_9 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 325.0
DYD3_k127_290484_0 Oxidoreductase - - - 3.872e-262 820.0
DYD3_k127_290484_1 Sulfotransferase - - - 1.164e-251 801.0
DYD3_k127_290484_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 2.548e-199 628.0
DYD3_k127_290484_3 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 287.0
DYD3_k127_290484_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.000000000000000000000000000000000000000000011 168.0
DYD3_k127_290484_5 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0000000000000000000000000000526 129.0
DYD3_k127_290484_6 - - - - 0.00000000000000000000000001075 113.0
DYD3_k127_290484_7 - - - - 0.00000001992 63.0
DYD3_k127_290484_8 - - - - 0.00008779 49.0
DYD3_k127_290484_9 - - - - 0.0009344 46.0
DYD3_k127_290957_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1177.0
DYD3_k127_290957_1 Belongs to the peptidase M16 family K07263 - - 0.0 1045.0
DYD3_k127_290957_2 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 GO:0000175,GO:0003674,GO:0003724,GO:0003824,GO:0004386,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008408,GO:0008997,GO:0009056,GO:0009057,GO:0009266,GO:0009409,GO:0009628,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016896,GO:0017111,GO:0019222,GO:0019439,GO:0034458,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 2.272e-243 773.0
DYD3_k127_290957_3 Membrane bound O-acyl transferase MBOAT family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009606 556.0
DYD3_k127_290957_4 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 427.0
DYD3_k127_290957_5 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003589 383.0
DYD3_k127_290957_6 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000001011 262.0
DYD3_k127_290957_7 - - - - 0.00000000000003768 75.0
DYD3_k127_290957_8 GDSL-like Lipase/Acylhydrolase family - - - 0.00001423 57.0
DYD3_k127_2914862_0 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381,K00392 - 1.8.1.2,1.8.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007568 536.0
DYD3_k127_2914862_1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 347.0
DYD3_k127_2914862_2 Belongs to the PAPS reductase family. CysH subfamily K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 297.0
DYD3_k127_2914862_3 Bacterial protein of unknown function (DUF934) - - - 0.00000000000000000000000000000000001128 152.0
DYD3_k127_2914862_4 Molybdopterin K07141 - 2.7.7.76 0.000000000000000000000000005617 118.0
DYD3_k127_2937212_0 AbgT putative transporter family K12942 - - 9.758e-216 699.0
DYD3_k127_2937212_1 Cobalamin biosynthesis protein CobT VWA domain K09883 - 6.6.1.2 5.312e-205 656.0
DYD3_k127_2937212_10 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 291.0
DYD3_k127_2937212_11 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006771 262.0
DYD3_k127_2937212_12 also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF K03969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009062 256.0
DYD3_k127_2937212_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000004581 231.0
DYD3_k127_2937212_14 ATP dependent DNA ligase C terminal region K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000002515 251.0
DYD3_k127_2937212_15 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000001896 220.0
DYD3_k127_2937212_16 COG2214 DnaJ-class molecular chaperone - - - 0.0000000000000000000000000000000000000000000000000000000002128 209.0
DYD3_k127_2937212_17 - - - - 0.000000000000000000000000000000000000000000000004342 189.0
DYD3_k127_2937212_18 phage shock protein C K03973 - - 0.000000000000000000000000000000000000006027 149.0
DYD3_k127_2937212_19 Transcriptional - - - 0.00000000000000000000000000000000005071 137.0
DYD3_k127_2937212_2 cobaltochelatase subunit CobS K09882 - 6.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005466 557.0
DYD3_k127_2937212_20 WHG domain - - - 0.0000000000000000000000000000000001588 140.0
DYD3_k127_2937212_21 - - - - 0.0000000000000000000000000000000008928 141.0
DYD3_k127_2937212_22 Belongs to the UPF0335 family - - - 0.00000000000000000000000716 115.0
DYD3_k127_2937212_23 Belongs to the BolA IbaG family K05527,K22066 GO:0006807,GO:0008150,GO:0008152,GO:0010467,GO:0019538,GO:0043170,GO:0044238,GO:0051604,GO:0071704,GO:0097428,GO:0106035,GO:1901564 - 0.00000000000000000000007884 110.0
DYD3_k127_2937212_24 - - - - 0.000000000000000000001489 100.0
DYD3_k127_2937212_25 Phage shock protein B K03970 - - 0.000000000000000001035 88.0
DYD3_k127_2937212_26 Hypoxia induced protein conserved region - - - 0.000000000000002859 78.0
DYD3_k127_2937212_27 Phage shock protein B K03970 - - 0.00000000000007668 78.0
DYD3_k127_2937212_28 Putative lumazine-binding - - - 0.0000000000004319 74.0
DYD3_k127_2937212_3 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 518.0
DYD3_k127_2937212_30 Phage shock protein B K03970 - - 0.0000005099 54.0
DYD3_k127_2937212_31 Phage shock protein B K03970 - - 0.00003242 49.0
DYD3_k127_2937212_4 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 496.0
DYD3_k127_2937212_5 COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K03974 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 443.0
DYD3_k127_2937212_6 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 407.0
DYD3_k127_2937212_7 dioxygenase K11159 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 375.0
DYD3_k127_2937212_8 Belongs to the class-I aminoacyl-tRNA synthetase family K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 360.0
DYD3_k127_2937212_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 306.0
DYD3_k127_2943980_0 Dehydrogenase K17760 - 1.1.9.1 2.189e-238 757.0
DYD3_k127_2943980_1 Dehydrogenase K17760 - 1.1.9.1 6.84e-227 723.0
DYD3_k127_2943980_10 Belongs to the LOG family - - - 0.00000000000000000000000000000000006194 141.0
DYD3_k127_2943980_11 - - - - 0.00000000000000000000000009511 115.0
DYD3_k127_2943980_12 PIN domain - - - 0.00000001273 64.0
DYD3_k127_2943980_13 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000007675 54.0
DYD3_k127_2943980_2 COG4993 Glucose dehydrogenase K00114,K17760,K22473 - 1.1.2.8,1.1.5.5,1.1.9.1 2.404e-199 644.0
DYD3_k127_2943980_3 Peptidase dimerisation domain K12941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 548.0
DYD3_k127_2943980_4 receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 539.0
DYD3_k127_2943980_5 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 506.0
DYD3_k127_2943980_6 Helicase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 393.0
DYD3_k127_2943980_7 N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000001139 222.0
DYD3_k127_2943980_8 gluconolactonase activity - - - 0.00000000000000000000000000000000000000000000000008611 188.0
DYD3_k127_2943980_9 - - - - 0.000000000000000000000000000000000003126 157.0
DYD3_k127_2963694_0 PQQ enzyme repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 608.0
DYD3_k127_2963694_1 Mur ligase family, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009122 540.0
DYD3_k127_2963694_2 Retinal pigment epithelial membrane protein K11159 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 397.0
DYD3_k127_2963694_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 310.0
DYD3_k127_2963694_4 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000001456 238.0
DYD3_k127_2963694_5 proteins, homologs of microcin C7 resistance protein MccF K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000001463 208.0
DYD3_k127_2963694_6 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000003259 214.0
DYD3_k127_2963694_7 - - - - 0.000000000000000000000000000000000000002031 168.0
DYD3_k127_2963694_8 protein conserved in bacteria - - - 0.0000000000000000000139 107.0
DYD3_k127_2970217_0 aminopeptidase N K01256 - 3.4.11.2 1.45e-279 884.0
DYD3_k127_2970217_1 Histidine kinase K07716 - 2.7.13.3 1.834e-228 734.0
DYD3_k127_2970217_10 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000002751 211.0
DYD3_k127_2970217_11 Chorismate mutase K04092,K04782 - 4.2.99.21,5.4.99.5 0.00000000000000000000000000000000001027 140.0
DYD3_k127_2970217_13 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0031323,GO:0033238,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0080090 2.7.7.42,2.7.7.89 0.00000000000000000000000000001235 123.0
DYD3_k127_2970217_14 - - - - 0.000000002 64.0
DYD3_k127_2970217_15 Heavy-metal resistance - - - 0.0000004668 61.0
DYD3_k127_2970217_2 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 443.0
DYD3_k127_2970217_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 363.0
DYD3_k127_2970217_4 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 372.0
DYD3_k127_2970217_5 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008755 275.0
DYD3_k127_2970217_6 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000002197 272.0
DYD3_k127_2970217_7 Belongs to the PRA-CH family K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000000000000000002473 243.0
DYD3_k127_2970217_8 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000008253 225.0
DYD3_k127_2970217_9 response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000315 213.0
DYD3_k127_2971773_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 3.198e-298 928.0
DYD3_k127_2971773_1 Belongs to the FPP GGPP synthase family K00795 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009536,GO:0009842,GO:0009987,GO:0016114,GO:0016740,GO:0016765,GO:0019637,GO:0033385,GO:0033386,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0090407,GO:1901576 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 394.0
DYD3_k127_2971773_2 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 344.0
DYD3_k127_2971773_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000003531 235.0
DYD3_k127_2971773_4 Histidine phosphatase superfamily (branch 1) - - - 0.0000000000000000000000000000000000000000000000000000000001399 210.0
DYD3_k127_2971773_5 regulatory protein, arsR - - - 0.00000000000000000000000000000000000000544 154.0
DYD3_k127_2971773_6 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000000002473 107.0
DYD3_k127_2990014_0 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 606.0
DYD3_k127_2990014_1 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000004179 231.0
DYD3_k127_3009905_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1526.0
DYD3_k127_3009905_1 Serine protein kinase K07180 GO:0003674,GO:0003824,GO:0004672,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006995,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0042594,GO:0043170,GO:0043412,GO:0043562,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0140096,GO:1901564 - 0.0 1169.0
DYD3_k127_3009905_10 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000001615 146.0
DYD3_k127_3009905_11 endoribonuclease L-PSP - - - 0.0000000000000000000000000000000008819 138.0
DYD3_k127_3009905_2 SpoVR family K06415 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 1.349e-245 789.0
DYD3_k127_3009905_3 Belongs to the UPF0229 family K09786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 571.0
DYD3_k127_3009905_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 359.0
DYD3_k127_3009905_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 303.0
DYD3_k127_3009905_7 Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000000000000000000000000000000011 200.0
DYD3_k127_3009905_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000002424 189.0
DYD3_k127_3009905_9 Dioxygenase - - - 0.0000000000000000000000000000000000000000001799 165.0
DYD3_k127_3032783_0 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 2.737e-245 765.0
DYD3_k127_3032783_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 509.0
DYD3_k127_3032783_10 - - - - 0.00000000000000000000000000000000000000000000000000000000001336 216.0
DYD3_k127_3032783_11 - - - - 0.0000000000000000000007524 106.0
DYD3_k127_3032783_12 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000001024 92.0
DYD3_k127_3032783_13 - - - - 0.000000000000000003174 85.0
DYD3_k127_3032783_14 Cupin 2, conserved barrel domain protein - - - 0.000000000000808 74.0
DYD3_k127_3032783_2 Methionine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 494.0
DYD3_k127_3032783_3 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 488.0
DYD3_k127_3032783_4 maleylacetate reductase K00217 - 1.3.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 437.0
DYD3_k127_3032783_5 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 382.0
DYD3_k127_3032783_6 glyoxalase bleomycin resistance protein dioxygenase K15975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 374.0
DYD3_k127_3032783_7 ATPases associated with a variety of cellular activities K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 306.0
DYD3_k127_3032783_8 Branched-chain amino acid transport K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006705 282.0
DYD3_k127_3032783_9 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000009115 219.0
DYD3_k127_3051885_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 2.721e-300 929.0
DYD3_k127_3051885_1 DNA topological change K03168 - 5.99.1.2 2.569e-197 642.0
DYD3_k127_3051885_10 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000006225 227.0
DYD3_k127_3051885_11 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000258 244.0
DYD3_k127_3051885_12 ankyrin repeat K15503 - - 0.00000000000000000000000000000000000000000000000000000000000000004595 252.0
DYD3_k127_3051885_13 KR domain K07124 - - 0.000000000000000000000000000000000000000000000000000000006587 214.0
DYD3_k127_3051885_14 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000007794 180.0
DYD3_k127_3051885_15 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000001538 168.0
DYD3_k127_3051885_16 translation initiation inhibitor, yjgF family - - - 0.0000000000000000000000000000001093 128.0
DYD3_k127_3051885_17 PFAM glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000009195 132.0
DYD3_k127_3051885_18 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000001019 107.0
DYD3_k127_3051885_19 - - - - 0.0000000000000001618 90.0
DYD3_k127_3051885_2 Protein of unknown function (DUF819) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 404.0
DYD3_k127_3051885_20 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000009018 70.0
DYD3_k127_3051885_21 recombinase activity - - - 0.0000007004 55.0
DYD3_k127_3051885_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 347.0
DYD3_k127_3051885_4 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007472 344.0
DYD3_k127_3051885_5 Aldolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 342.0
DYD3_k127_3051885_6 Participates in transcription elongation, termination and antitermination K02601 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003078 273.0
DYD3_k127_3051885_7 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006507 287.0
DYD3_k127_3051885_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009288 258.0
DYD3_k127_3051885_9 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000002106 246.0
DYD3_k127_3060337_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 2.864e-228 724.0
DYD3_k127_3060337_1 Sulfate adenylyltransferase K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006636 511.0
DYD3_k127_3060337_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 347.0
DYD3_k127_3060337_3 Catalyzes the synthesis of activated sulfate K00955 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004525 281.0
DYD3_k127_3060337_4 nucleotidase K01082 - 3.1.3.7 0.0000000000000000000000000000000000000215 156.0
DYD3_k127_3060337_5 - - - - 0.0000000000000000000000000000000000000505 156.0
DYD3_k127_3060337_6 Nickel-dependent hydrogenase - - - 0.00000000000000000000000000000002263 141.0
DYD3_k127_3080750_0 PFAM Anthranilate synthase component I K01657,K01665 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 376.0
DYD3_k127_3080750_1 COG0512 Anthranilate para-aminobenzoate synthases component II K01658,K01664,K13497 - 2.4.2.18,2.6.1.85,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000001038 246.0
DYD3_k127_3080750_2 COG0115 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00826,K02619 - 2.6.1.42,4.1.3.38 0.0000000000000005607 89.0
DYD3_k127_3084953_0 Putative phage tail protein - - - 0.0 1259.0
DYD3_k127_3084953_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0031323,GO:0033238,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0080090 2.7.7.42,2.7.7.89 1.966e-212 688.0
DYD3_k127_3084953_10 Phage cell wall peptidase, NlpC P60 family - - - 0.000000000000000000000000000000000000000000000000000000000001215 214.0
DYD3_k127_3084953_11 Phage tail tube protein - - - 0.0000000000000000000000000000000000000000000000000000007256 195.0
DYD3_k127_3084953_12 - - - - 0.0000000000000000000000000000000003949 139.0
DYD3_k127_3084953_13 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 GO:0003674,GO:0003824,GO:0008150,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840 - 0.0000000000000000000000000008804 118.0
DYD3_k127_3084953_14 tape measure - - - 0.0000000000000000000000003523 111.0
DYD3_k127_3084953_15 Protein of unknown function (DUF3168) - - - 0.00000000000000000000006187 103.0
DYD3_k127_3084953_16 - - - - 0.0000000000000000000003248 113.0
DYD3_k127_3084953_17 Phage tail tube protein, GTA-gp10 - - - 0.00000000000000002345 85.0
DYD3_k127_3084953_18 Phage head-tail joining protein - - - 0.0000000000000009716 85.0
DYD3_k127_3084953_2 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832 503.0
DYD3_k127_3084953_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006596 470.0
DYD3_k127_3084953_4 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 432.0
DYD3_k127_3084953_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 GO:0000160,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009889,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010468,GO:0010556,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031326,GO:0035556,GO:0042221,GO:0042802,GO:0046688,GO:0048518,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 375.0
DYD3_k127_3084953_6 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000832 371.0
DYD3_k127_3084953_7 COG2214 DnaJ-class molecular chaperone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007709 311.0
DYD3_k127_3084953_8 Phage conserved hypothetical protein BR0599 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000116 291.0
DYD3_k127_3084953_9 Conserved hypothetical protein 2217 (DUF2460) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000366 274.0
DYD3_k127_3087282_0 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 8.81e-308 958.0
DYD3_k127_3087282_1 DNA topological change K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 564.0
DYD3_k127_3087282_2 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 476.0
DYD3_k127_3087282_3 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 317.0
DYD3_k127_3087282_4 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000001167 254.0
DYD3_k127_3087282_5 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000002642 151.0
DYD3_k127_3087282_6 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000001122 137.0
DYD3_k127_3087282_7 protein localization to T-tubule K10380,K15502 - - 0.0000000000000000000000000004685 132.0
DYD3_k127_3087282_8 SnoaL-like domain - - - 0.00000000000000000001044 100.0
DYD3_k127_3087282_9 Sodium hydrogen exchanger K11105 - - 0.00001897 49.0
DYD3_k127_3147641_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1527.0
DYD3_k127_3147641_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 544.0
DYD3_k127_3147641_2 Protein of unknown function (DUF3137) - - - 0.0000000000000000000000000000000000000000000000000000000007913 214.0
DYD3_k127_3147641_3 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000002464 173.0
DYD3_k127_3147641_4 Protein of unknown function (DUF3137) - - - 0.000000000000000117 94.0
DYD3_k127_3147641_5 PFAM Peptidase family M50 - - - 0.00002609 49.0
DYD3_k127_3179267_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 1.947e-281 892.0
DYD3_k127_3179267_1 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 514.0
DYD3_k127_3179267_10 - - - - 0.0002915 49.0
DYD3_k127_3179267_2 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain K02488 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0042802,GO:0044424,GO:0044464 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 511.0
DYD3_k127_3179267_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 507.0
DYD3_k127_3179267_4 ROK family K00845,K00847 - 2.7.1.2,2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006022 353.0
DYD3_k127_3179267_5 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000001216 237.0
DYD3_k127_3179267_6 PFAM response regulator receiver K11443 - - 0.000000000000000000000000000000000000000000000000008632 183.0
DYD3_k127_3179267_7 Belongs to the bacterial ribosomal protein bL33 family K02913 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000001124 107.0
DYD3_k127_3179267_8 - - - - 0.0000000000000000000001945 109.0
DYD3_k127_3179267_9 - - - - 0.000000000000004467 85.0
DYD3_k127_319261_0 COG0577 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005518 432.0
DYD3_k127_319261_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006314 410.0
DYD3_k127_319261_2 COG2207 AraC-type DNA-binding domain-containing proteins K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 381.0
DYD3_k127_319261_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 333.0
DYD3_k127_319261_4 COG1136 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 307.0
DYD3_k127_319261_5 Glyoxalase bleomycin resistance protein dioxygenase K01759 GO:0003674,GO:0003824,GO:0004462,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016846,GO:0034641,GO:0043603,GO:0044237,GO:0051186,GO:0071704,GO:1901564 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000005018 257.0
DYD3_k127_319261_6 Integral membrane protein (DUF2244) - - - 0.000000000000000000000000000000000000008316 151.0
DYD3_k127_319261_7 Protein of unknown function (DUF433) - - - 0.000000000000000000000000001378 114.0
DYD3_k127_319261_8 - - - - 0.0000000000000000000006048 103.0
DYD3_k127_319261_9 - - - - 0.000000000000000007636 90.0
DYD3_k127_3196886_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 573.0
DYD3_k127_3196886_1 Rod shape-determining protein MreB K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 556.0
DYD3_k127_3196886_10 ABC transporter, ATP-binding protein K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 369.0
DYD3_k127_3196886_11 Protein of unknown function (DUF418) K07148 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 343.0
DYD3_k127_3196886_12 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 318.0
DYD3_k127_3196886_13 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006707 265.0
DYD3_k127_3196886_14 Fumarylacetoacetate (FAA) hydrolase family K16165 - 3.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000006333 237.0
DYD3_k127_3196886_15 membrane protein TerC - - - 0.00000000000000000000000000000000000000000000000000000000000003454 220.0
DYD3_k127_3196886_16 shape-determining protein MreC K03570 - - 0.000000000000000000000000000000000000000000000000000000001202 211.0
DYD3_k127_3196886_17 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000000001234 195.0
DYD3_k127_3196886_18 Major facilitator superfamily K05820 - - 0.0000000000000000000000000000000000000000000000000005556 199.0
DYD3_k127_3196886_19 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000001093 175.0
DYD3_k127_3196886_2 COG0768 Cell division protein FtsI penicillin-binding protein 2 K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006644 566.0
DYD3_k127_3196886_20 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.0000000000000000000000000000000001092 143.0
DYD3_k127_3196886_21 ABC-type transport auxiliary lipoprotein component K02067,K09857,K18480 - - 0.000000000000000000000000000000001692 138.0
DYD3_k127_3196886_22 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000002656 82.0
DYD3_k127_3196886_23 Protein of unknown function (DUF423) - - - 0.000000000000003028 81.0
DYD3_k127_3196886_25 shape-determining protein K03571 - - 0.0000000000004995 77.0
DYD3_k127_3196886_26 SCP-2 sterol transfer family - - - 0.000003599 53.0
DYD3_k127_3196886_3 NAT, N-acetyltransferase, of N-acetylglutamate synthase K22478 - 2.3.1.1,2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 507.0
DYD3_k127_3196886_4 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065,K13252 - 2.1.3.3,2.1.3.6,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 475.0
DYD3_k127_3196886_5 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000766 434.0
DYD3_k127_3196886_6 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 417.0
DYD3_k127_3196886_7 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 421.0
DYD3_k127_3196886_8 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008087 368.0
DYD3_k127_3196886_9 Belongs to the SEDS family K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008544 370.0
DYD3_k127_322100_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1141.0
DYD3_k127_322100_1 alpha subunit K05549 - 1.14.12.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009899 549.0
DYD3_k127_322100_2 Aromatic-ring-hydroxylating dioxygenase, beta subunit K05550 - 1.14.12.10 0.00000000000000000000000000000000000000000006077 169.0
DYD3_k127_322100_3 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000004667 161.0
DYD3_k127_322100_4 YjbR - - - 0.0000000000000000001249 92.0
DYD3_k127_322100_5 Phage lysozyme K01185 - 3.2.1.17 0.000000000003478 74.0
DYD3_k127_322100_6 - - - - 0.0000001263 62.0
DYD3_k127_3300037_0 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0 1560.0
DYD3_k127_3300037_1 COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain K06147,K11004 - - 3.242e-302 944.0
DYD3_k127_3300037_2 type I secretion membrane fusion protein, HlyD family K02022,K11003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007311 405.0
DYD3_k127_3300037_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000005518 187.0
DYD3_k127_3300037_4 Bacterial regulatory protein, arsR family - - - 0.00000000000000000000000000000000000000000000262 167.0
DYD3_k127_3300037_5 Periplasmic component of the Tol biopolymer transport system - - - 0.0007521 53.0
DYD3_k127_3374666_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.333e-275 855.0
DYD3_k127_3374666_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000002138 238.0
DYD3_k127_3374666_2 Protein of unknwon function (DUF3008) - - - 0.000000000002759 79.0
DYD3_k127_3374666_3 Antibiotic biosynthesis monooxygenase - - - 0.00000004942 59.0
DYD3_k127_3391053_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009380,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 2.603e-194 620.0
DYD3_k127_3391053_1 Extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols K04101 - 1.13.11.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008194 486.0
DYD3_k127_3391053_2 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001317 271.0
DYD3_k127_3391053_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001957 268.0
DYD3_k127_3391053_4 Protocatechuate 4,5-dioxygenase K04100 - 1.13.11.8 0.00000000000000000000000000000000000000000000000000001435 212.0
DYD3_k127_3391053_5 Belongs to the Nudix hydrolase family - - - 0.000000000000000000000000000000000008335 141.0
DYD3_k127_3391053_6 sensor histidine kinase response regulator - - - 0.000000000000000000000000003196 118.0
DYD3_k127_3391053_7 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000003624 116.0
DYD3_k127_3398516_0 Allophanate hydrolase subunit 2 K01941 - 6.3.4.6 0.0 1683.0
DYD3_k127_3398516_1 Amidase K01457 - 3.5.1.54 8.974e-241 761.0
DYD3_k127_3398516_10 NikR C terminal nickel binding domain K07722 - - 0.0000000000000000000000000000000000000000000000000000000009275 204.0
DYD3_k127_3398516_11 Ankyrin repeats (3 copies) - - - 0.0000000000000000000000000000000000000000000000000000002274 214.0
DYD3_k127_3398516_12 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000004961 152.0
DYD3_k127_3398516_13 - - - - 0.00000009635 63.0
DYD3_k127_3398516_2 TIGRFAM ABC transporter periplasmic binding protein, urea carboxylase region K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 439.0
DYD3_k127_3398516_3 Domain of unknown function (DUF1989) K09967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 383.0
DYD3_k127_3398516_4 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 359.0
DYD3_k127_3398516_5 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007572 368.0
DYD3_k127_3398516_6 Domain of unknown function (DUF1989) K09967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008525 344.0
DYD3_k127_3398516_7 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 337.0
DYD3_k127_3398516_8 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 338.0
DYD3_k127_3398516_9 CHASE2 domain - - - 0.0000000000000000000000000000000000000000000000000000000000006894 230.0
DYD3_k127_340467_0 COG4962 Flp pilus assembly protein, ATPase CpaF K02283 - - 3.648e-242 756.0
DYD3_k127_340467_1 Belongs to the GSP D family K02280 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 556.0
DYD3_k127_340467_2 Pilus assembly protein K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 527.0
DYD3_k127_340467_3 type II secretion system protein K12511 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 394.0
DYD3_k127_340467_4 Secretion system protein K12510 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 393.0
DYD3_k127_340467_5 Pilus assembly protein CpaB K02279 - - 0.000000000000000000000000000000000000000000000000001813 189.0
DYD3_k127_340467_6 Pilus biogenesis CpaD protein (pilus_cpaD) K02281 - - 0.00000000000000000000000000000000003142 145.0
DYD3_k127_343554_0 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 322.0
DYD3_k127_343554_1 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000004803 247.0
DYD3_k127_343554_2 GCN5-related N-acetyl-transferase K06975 - - 0.000000000000000000000000006746 127.0
DYD3_k127_3440247_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1033.0
DYD3_k127_3440247_1 Participates in both transcription termination and antitermination K02600 - - 2.338e-215 677.0
DYD3_k127_3440247_2 Dehydrogenase K17760 - 1.1.9.1 3.881e-207 661.0
DYD3_k127_3440247_3 Protein of unknown function (DUF448) K07742 - - 0.000000000000000000000000000000000000000000000000000006482 197.0
DYD3_k127_3440247_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000000000000000000001745 171.0
DYD3_k127_3440247_5 Putative restriction endonuclease - - - 0.000946 44.0
DYD3_k127_3451659_0 Belongs to the beta-ketoacyl-ACP synthases family - - - 0.0 1833.0
DYD3_k127_3451659_1 Beta-ketoacyl synthase - - - 0.0 1179.0
DYD3_k127_3451659_10 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 472.0
DYD3_k127_3451659_11 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009908 418.0
DYD3_k127_3451659_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 401.0
DYD3_k127_3451659_13 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009983 353.0
DYD3_k127_3451659_14 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092,K18649 - 3.1.3.15,3.1.3.25,3.1.3.93 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006141 319.0
DYD3_k127_3451659_15 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 312.0
DYD3_k127_3451659_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005005 310.0
DYD3_k127_3451659_17 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002899 258.0
DYD3_k127_3451659_18 response to abiotic stimulus K06867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001079 271.0
DYD3_k127_3451659_19 Lipid A 3-O-deacylase (PagL) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001649 242.0
DYD3_k127_3451659_2 TonB-dependent receptor - - - 3.863e-236 753.0
DYD3_k127_3451659_21 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000013 231.0
DYD3_k127_3451659_22 GntR family K11475 - - 0.00000000000000000000000000000000000000000000000000000000000002471 225.0
DYD3_k127_3451659_23 Glutathione S-transferase, C-terminal domain K11209 - - 0.0000000000000000000000000000000000000000000000000000000000003365 221.0
DYD3_k127_3451659_25 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000001245 219.0
DYD3_k127_3451659_26 - - - - 0.00000000000000000000000000000000000000000000000000006055 198.0
DYD3_k127_3451659_27 response regulator K13589 - - 0.000000000000000000000000000000000000000000000000002624 184.0
DYD3_k127_3451659_28 Cytidine and deoxycytidylate deaminase zinc-binding region K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000005112 180.0
DYD3_k127_3451659_29 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000005849 178.0
DYD3_k127_3451659_3 PQQ-like domain K17760 - 1.1.9.1 3.093e-228 730.0
DYD3_k127_3451659_30 Belongs to the small heat shock protein (HSP20) family K04080 - - 0.0000000000000000000000000000000000000000000000062 176.0
DYD3_k127_3451659_31 protein-glutamate methylesterase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000001776 145.0
DYD3_k127_3451659_32 peptidyl-prolyl cis-trans isomerase K03773 - 5.2.1.8 0.0000000000000000000000000000000000006125 147.0
DYD3_k127_3451659_33 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000533 152.0
DYD3_k127_3451659_34 Protein required for attachment to host cells - - - 0.000000000000000000000008655 109.0
DYD3_k127_3451659_36 Belongs to the P-Pant transferase superfamily K06133 - - 0.0000000000000000000008126 105.0
DYD3_k127_3451659_37 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000008395 95.0
DYD3_k127_3451659_38 - - - - 0.000000000000000002684 97.0
DYD3_k127_3451659_39 Acetyltransferase (GNAT) domain - - - 0.0000000000008776 80.0
DYD3_k127_3451659_4 dehydratase K06118 - 3.13.1.1 8.218e-218 681.0
DYD3_k127_3451659_40 HWE histidine kinase - - - 0.00000001187 57.0
DYD3_k127_3451659_5 TonB dependent receptor K02014 - - 1.308e-217 704.0
DYD3_k127_3451659_6 Aminomethyltransferase folate-binding domain K15064 - - 1.698e-213 673.0
DYD3_k127_3451659_7 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 1.127e-200 633.0
DYD3_k127_3451659_8 DNA topological change K03168 - 5.99.1.2 1.261e-196 641.0
DYD3_k127_3451659_9 COG2070 Dioxygenases related to 2-nitropropane dioxygenase K15329 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 562.0
DYD3_k127_3480422_0 M13 family peptidase K01415,K07386 - 3.4.24.71 9.467e-276 863.0
DYD3_k127_3480422_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 340.0
DYD3_k127_3480422_2 Uncharacterized protein family, UPF0114 - - - 0.00000000000000000000000000000000000000000000000000002729 194.0
DYD3_k127_3480422_3 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000122 140.0
DYD3_k127_3480422_4 protein involved in tolerance to divalent cations K03926 - - 0.0000000000000000000005335 99.0
DYD3_k127_356188_0 COG1002 Type II restriction enzyme, methylase subunits - - - 0.0 1074.0
DYD3_k127_356188_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1048.0
DYD3_k127_356188_2 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 3.409e-283 907.0
DYD3_k127_356188_3 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 473.0
DYD3_k127_356188_4 Protein of unknown function (DUF3500) - - - 0.0000000000000000000000000000000000000000000000000000000000001876 227.0
DYD3_k127_356188_5 Yip1 domain - - - 0.0000000000000000000000000000000000000000000000000009277 199.0
DYD3_k127_356188_6 COG0784 FOG CheY-like receiver - - - 0.0000000003086 67.0
DYD3_k127_356188_7 PFAM response regulator receiver - - - 0.000000001018 66.0
DYD3_k127_3623370_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 3.325e-275 862.0
DYD3_k127_3623370_1 COG3104 Dipeptide tripeptide permease K03305 - - 2.73e-256 805.0
DYD3_k127_3623370_10 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000002372 233.0
DYD3_k127_3623370_11 Diguanylate cyclase K13245 - 3.1.4.52 0.0000000000000000000000000000000000000000000000000000000000000006399 241.0
DYD3_k127_3623370_12 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000003037 214.0
DYD3_k127_3623370_13 Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I K02258 - - 0.00000000000000000000000000000000000000000000000000000002311 202.0
DYD3_k127_3623370_14 Protein of unknown function (DUF983) - - - 0.000000000000000000000000000000000000000007041 171.0
DYD3_k127_3623370_15 SURF1-like protein K14998 - - 0.0000000000000000000000000000000000000005692 157.0
DYD3_k127_3623370_16 COG0457 FOG TPR repeat - - - 0.000000000000000000000000006017 124.0
DYD3_k127_3623370_17 Putative transposase of IS4/5 family (DUF4096) - - - 0.000000000000000000000002817 110.0
DYD3_k127_3623370_18 Tetratricopeptide repeat - - - 0.00000000000000000004595 100.0
DYD3_k127_3623370_19 Ankyrin repeats (many copies) - - - 0.00000000000000001129 88.0
DYD3_k127_3623370_2 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K07303 - 1.3.99.16 8.703e-219 705.0
DYD3_k127_3623370_20 Aspartyl protease - - - 0.000000002155 69.0
DYD3_k127_3623370_3 glutamate--cysteine ligase K01919 - 6.3.2.2 6.454e-201 635.0
DYD3_k127_3623370_4 COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3 K02276 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007325 443.0
DYD3_k127_3623370_5 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 365.0
DYD3_k127_3623370_6 Type IV secretory system Conjugative DNA transfer K03205 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 355.0
DYD3_k127_3623370_7 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 345.0
DYD3_k127_3623370_8 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000041 295.0
DYD3_k127_3623370_9 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000004116 256.0
DYD3_k127_3643486_0 Belongs to the phosphoglycerate kinase family K00927 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 522.0
DYD3_k127_3643486_1 fructose-bisphosphate aldolase K01623 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 487.0
DYD3_k127_3643486_11 electron transfer activity K08738 - - 0.0001183 55.0
DYD3_k127_3643486_2 COG2041 Sulfite oxidase and related enzymes K00387 - 1.8.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008983 372.0
DYD3_k127_3643486_3 COG0346 Lactoylglutathione lyase and related lyases K07032 - - 0.000000000000000000000000000000000000000000000000000000000006702 230.0
DYD3_k127_3643486_4 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000005923 207.0
DYD3_k127_3643486_5 PFAM Chitinase class I - - - 0.00000000000000000000000000000000000000000000000000000003321 208.0
DYD3_k127_3643486_6 PFAM Glycosyl hydrolase family 3 C terminal domain K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000006037 194.0
DYD3_k127_3643486_7 nucleoside 2-deoxyribosyltransferase - - - 0.000000000000000000000227 110.0
DYD3_k127_3643486_8 - - - - 0.000000000000000000699 99.0
DYD3_k127_3676004_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1109.0
DYD3_k127_3676004_1 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362 - 1.7.1.15 3.819e-194 609.0
DYD3_k127_3676004_10 antibiotic catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000004034 226.0
DYD3_k127_3676004_11 Nitrite reductase NAD(P)H , small subunit K00363 - 1.7.1.15 0.00000000000000000000000000000000000000000223 171.0
DYD3_k127_3676004_12 LysR substrate binding domain - - - 0.0000000000000000000000000000001485 135.0
DYD3_k127_3676004_13 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000693 109.0
DYD3_k127_3676004_14 Cytochrome c K08738 - - 0.000000000000000337 83.0
DYD3_k127_3676004_15 Protein of unknown function (DUF1552) - - - 0.000000000000001179 84.0
DYD3_k127_3676004_2 Protein of unknown function (DUF3604) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 591.0
DYD3_k127_3676004_3 DNA topological change - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004144 521.0
DYD3_k127_3676004_4 Protein of unknown function (DUF3604) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 488.0
DYD3_k127_3676004_5 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008 443.0
DYD3_k127_3676004_6 Tetrapyrrole (Corrin/Porphyrin) Methylases K02303 - 2.1.1.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001023 277.0
DYD3_k127_3676004_7 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000161 232.0
DYD3_k127_3676004_8 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000002358 228.0
DYD3_k127_3676004_9 PFAM helix-turn-helix- domain containing protein AraC type - - - 0.0000000000000000000000000000000000000000000000000000000000002391 224.0
DYD3_k127_3714344_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.321 0.0 3808.0
DYD3_k127_3714344_1 phosphorylase K01243 - 3.2.2.9 0.00000000000000000000000000000000000004 147.0
DYD3_k127_3714344_2 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000001698 91.0
DYD3_k127_3714344_4 - - - - 0.00007547 49.0
DYD3_k127_3714344_5 Protein of unknown function (DUF1328) - - - 0.0002373 50.0
DYD3_k127_38332_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 3.724e-267 841.0
DYD3_k127_38332_1 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 589.0
DYD3_k127_38332_2 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 511.0
DYD3_k127_38332_3 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000009574 239.0
DYD3_k127_38332_4 OsmC-like protein K04063 - - 0.0000000000000000000000000000000000000000000000000000000000002656 215.0
DYD3_k127_38332_5 - - - - 0.0000000000000000000001768 110.0
DYD3_k127_3839901_0 Tetratricopeptide repeat - - - 1.292e-219 726.0
DYD3_k127_3839901_1 PFAM MgtE intracellular - - - 0.000000000000000000000000000105 121.0
DYD3_k127_3840216_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000047 578.0
DYD3_k127_3840216_1 glucose sorbosone K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 409.0
DYD3_k127_3840216_10 protein conserved in bacteria K09774 - - 0.0000000000000000000003805 104.0
DYD3_k127_3840216_11 Protein of unknown function (DUF1150) - - - 0.0000000000000000205 84.0
DYD3_k127_3840216_12 OstA-like protein K09774 - - 0.0000000000000001154 93.0
DYD3_k127_3840216_13 Protein of unknown function (FYDLN_acid) - - - 0.000000000003214 78.0
DYD3_k127_3840216_14 - - - - 0.0000000000114 72.0
DYD3_k127_3840216_15 NADH-quinone oxidoreductase K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000007512 61.0
DYD3_k127_3840216_2 ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 372.0
DYD3_k127_3840216_3 transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 325.0
DYD3_k127_3840216_4 exonuclease K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 321.0
DYD3_k127_3840216_5 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000000000000000000000000000006827 214.0
DYD3_k127_3840216_6 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.00000000000000000000000000000000000000000000000756 177.0
DYD3_k127_3840216_7 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.000000000000000000000000000000000000000000000009436 178.0
DYD3_k127_3840216_8 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000000000000000000002362 162.0
DYD3_k127_3840216_9 protein conserved in bacteria K11719 - - 0.0000000000000000000000000000005631 138.0
DYD3_k127_3897166_0 Peptidase family M13 K07386 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 492.0
DYD3_k127_3897166_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 468.0
DYD3_k127_3897166_2 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 290.0
DYD3_k127_3897166_3 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007842 257.0
DYD3_k127_3897166_4 Phytochelatin synthase - - - 0.00000000000000000000000000000000000000000000000000000000000006042 222.0
DYD3_k127_3897166_5 - - - - 0.00000000000000000000000000000000000000000000000000000000002283 213.0
DYD3_k127_3897166_6 Response regulator receiver - - - 0.00000000000000000006164 98.0
DYD3_k127_3897166_7 - - - - 0.00000000000004883 85.0
DYD3_k127_3951775_0 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 9.453e-313 972.0
DYD3_k127_3951775_1 Peptidase family M3 K01284 - 3.4.15.5 6.081e-296 924.0
DYD3_k127_3951775_10 COG1495 Disulfide bond formation protein DsbB - - - 0.0000000000000000000000000000001217 141.0
DYD3_k127_3951775_11 - - - - 0.0000000002315 70.0
DYD3_k127_3951775_13 Glycine-zipper domain - - - 0.0009359 48.0
DYD3_k127_3951775_2 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 616.0
DYD3_k127_3951775_3 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 308.0
DYD3_k127_3951775_4 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000000002733 237.0
DYD3_k127_3951775_5 DNA mismatch endonuclease Vsr K07458 - - 0.0000000000000000000000000000000000000000000000000000000005206 207.0
DYD3_k127_3951775_6 Major facilitator superfamily K06902 - - 0.0000000000000000000000000000000000000000000000000000000007885 220.0
DYD3_k127_3951775_7 Flavodoxin-like fold K19784 - - 0.0000000000000000000000000000000000000000000000000000004205 202.0
DYD3_k127_3951775_8 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000002161 199.0
DYD3_k127_3951775_9 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000193 186.0
DYD3_k127_3979938_0 E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate K00164 - 1.2.4.2 0.0 1471.0
DYD3_k127_3979938_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 477.0
DYD3_k127_3979938_2 CoA binding domain K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 447.0
DYD3_k127_3979938_3 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 417.0
DYD3_k127_3979938_4 PIN domain - - - 0.0000000000000000000000000000000000009384 145.0
DYD3_k127_400637_0 Belongs to the aldehyde dehydrogenase family K00146,K09472 - 1.2.1.39,1.2.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000778 537.0
DYD3_k127_400637_1 PQQ-like domain K05889 - 1.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 492.0
DYD3_k127_400637_10 - - - - 0.000000000000008873 79.0
DYD3_k127_400637_11 Transposase DDE domain - - - 0.0000001375 53.0
DYD3_k127_400637_2 FAD linked oxidases, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 480.0
DYD3_k127_400637_3 NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 419.0
DYD3_k127_400637_4 Filamentation induced by cAMP protein fic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 316.0
DYD3_k127_400637_5 glyoxalase III activity K02005 - - 0.0000000000000000000000000000000000000000000000000000000007819 211.0
DYD3_k127_400637_6 Phage derived protein Gp49-like (DUF891) - - - 0.000000000000000000000000000000000000000001726 160.0
DYD3_k127_400637_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000001778 136.0
DYD3_k127_400637_8 Helix-turn-helix domain - - - 0.000000000000000000000004512 110.0
DYD3_k127_400637_9 - - - - 0.000000000000001333 86.0
DYD3_k127_4024461_0 Aminopeptidase K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007353 301.0
DYD3_k127_4024461_1 fatty acid desaturase - - - 0.00000000003159 75.0
DYD3_k127_4025889_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.000000000000000000000000000000000000000000000000000005168 198.0
DYD3_k127_4025889_1 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000000000000004042 188.0
DYD3_k127_4025889_2 - - - - 0.000000000000003831 83.0
DYD3_k127_4025889_3 EF hand - - - 0.00000000001533 72.0
DYD3_k127_4089174_0 Receptor - - - 0.0 1066.0
DYD3_k127_4089174_1 COG1653 ABC-type sugar transport system, periplasmic component K17321 - - 9.729e-304 945.0
DYD3_k127_4089174_10 PFAM Neutral alkaline nonlysosomal ceramidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 602.0
DYD3_k127_4089174_11 Luciferase-like monooxygenase K09018 - 1.14.99.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 590.0
DYD3_k127_4089174_12 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006218 559.0
DYD3_k127_4089174_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 545.0
DYD3_k127_4089174_14 L-2-hydroxyglutarate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008917 519.0
DYD3_k127_4089174_15 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 514.0
DYD3_k127_4089174_16 thiolester hydrolase activity K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 516.0
DYD3_k127_4089174_17 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 484.0
DYD3_k127_4089174_18 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 472.0
DYD3_k127_4089174_2 TonB dependent receptor K02014 - - 2.214e-280 890.0
DYD3_k127_4089174_20 Major facilitator superfamily K08217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 463.0
DYD3_k127_4089174_21 ABC-type sugar transport systems, permease components K17322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 437.0
DYD3_k127_4089174_22 COG2755 Lysophospholipase L1 and related esterases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 437.0
DYD3_k127_4089174_23 Belongs to the ABC transporter superfamily K17325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 432.0
DYD3_k127_4089174_24 helix_turn _helix lactose operon repressor K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 416.0
DYD3_k127_4089174_25 esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 412.0
DYD3_k127_4089174_26 Belongs to the ABC transporter superfamily K17324 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 395.0
DYD3_k127_4089174_27 Outer membrane receptor proteins mostly Fe transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 416.0
DYD3_k127_4089174_28 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 357.0
DYD3_k127_4089174_29 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 339.0
DYD3_k127_4089174_3 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls - - - 1.786e-242 755.0
DYD3_k127_4089174_30 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 339.0
DYD3_k127_4089174_31 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 320.0
DYD3_k127_4089174_32 In vivo, quickly hydrolyzes the ureidoacrylate peracid to avoid toxicity, but can also hydrolyzes ureidoacrylate that is formed spontaneously from ureidoacrylate peracid. One of the products of hydrolysis, carbamate, hydrolyzes spontaneously, thereby releasing one of the pyrimidine rings nitrogen atoms as ammonia and one of its carbons as CO2 K09020 - 3.5.1.110 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009161 304.0
DYD3_k127_4089174_33 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 311.0
DYD3_k127_4089174_34 enterobactin catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000757 305.0
DYD3_k127_4089174_35 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 300.0
DYD3_k127_4089174_36 NADH dehydrogenase NAD(P)H nitroreductase K09019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003931 263.0
DYD3_k127_4089174_37 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005331 255.0
DYD3_k127_4089174_38 AraC-binding-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000028 243.0
DYD3_k127_4089174_39 Flavin reductase like domain - - - 0.0000000000000000000000000000000000000000000000000000000001908 207.0
DYD3_k127_4089174_4 Belongs to the type-B carboxylesterase lipase family K03929 - - 1.129e-221 701.0
DYD3_k127_4089174_40 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000009309 209.0
DYD3_k127_4089174_41 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000001307 214.0
DYD3_k127_4089174_42 Protein of unknown function (DUF3237) - - - 0.000000000000000000000000000000000000000000000000008151 189.0
DYD3_k127_4089174_43 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000226 117.0
DYD3_k127_4089174_44 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000001778 110.0
DYD3_k127_4089174_46 small integral membrane protein - - - 0.000000000000000000002685 106.0
DYD3_k127_4089174_47 - - - - 0.0000000000000002976 81.0
DYD3_k127_4089174_48 Cupin 2, conserved barrel domain protein K11312 - - 0.00000000001109 72.0
DYD3_k127_4089174_49 Maleylacetoacetate isomerase K01800,K01801 GO:0003674,GO:0003824,GO:0004364,GO:0004601,GO:0004602,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006140,GO:0006518,GO:0006520,GO:0006558,GO:0006559,GO:0006575,GO:0006725,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009063,GO:0009072,GO:0009074,GO:0009636,GO:0009889,GO:0009987,GO:0010510,GO:0010565,GO:0016034,GO:0016054,GO:0016209,GO:0016491,GO:0016684,GO:0016740,GO:0016765,GO:0016787,GO:0016824,GO:0016853,GO:0016859,GO:0017144,GO:0019120,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0019439,GO:0019752,GO:0030808,GO:0031323,GO:0031326,GO:0031974,GO:0034248,GO:0034641,GO:0042221,GO:0042737,GO:0042762,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044272,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046983,GO:0050789,GO:0050794,GO:0050812,GO:0050896,GO:0051171,GO:0051174,GO:0051186,GO:0051193,GO:0051196,GO:0051716,GO:0055114,GO:0062012,GO:0065007,GO:0070013,GO:0070887,GO:0071704,GO:0080090,GO:0097237,GO:0098754,GO:0098869,GO:1900371,GO:1900542,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901685,GO:1901687,GO:1902221,GO:1902222,GO:1990748 5.2.1.2,5.2.1.4 0.00000098 55.0
DYD3_k127_4089174_5 PQQ-like domain K17760 - 1.1.9.1 1.535e-218 699.0
DYD3_k127_4089174_50 PFAM monooxygenase FAD-binding K00481 - 1.14.13.2 0.0001175 47.0
DYD3_k127_4089174_6 Peptidase family M20/M25/M40 K01438 - 3.5.1.16 3.375e-209 660.0
DYD3_k127_4089174_7 - - - - 2.068e-206 666.0
DYD3_k127_4089174_8 Luciferase-like monooxygenase - - - 8.353e-200 627.0
DYD3_k127_4089174_9 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 8.677e-195 619.0
DYD3_k127_4145688_0 COG4166 ABC-type oligopeptide transport system, periplasmic component K02035,K15580 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006810,GO:0006857,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0015833,GO:0030288,GO:0030313,GO:0031975,GO:0033218,GO:0042277,GO:0042597,GO:0042886,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0061077,GO:0071702,GO:0071705,GO:1900750 - 3.531e-224 706.0
DYD3_k127_4145688_1 signal peptide peptidase K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004192 558.0
DYD3_k127_4145688_10 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 0.00006212 48.0
DYD3_k127_4145688_2 MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008489 403.0
DYD3_k127_4145688_3 With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell K15582 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009859 391.0
DYD3_k127_4145688_4 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 361.0
DYD3_k127_4145688_5 TonB system transport protein ExbB K03561 - - 0.0000000000000000000000000000000000000000000000000000002217 199.0
DYD3_k127_4145688_6 Protein of unknown function (DUF3450) - - - 0.000000000000000000000000000000000000000000000000000008917 202.0
DYD3_k127_4145688_7 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000000000000000000002567 148.0
DYD3_k127_4145688_8 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000000000000000000000007991 126.0
DYD3_k127_4145688_9 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000000000000000003039 109.0
DYD3_k127_4174305_0 DNA polymerase K02337 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.0 1374.0
DYD3_k127_4174305_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1026.0
DYD3_k127_4174305_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007713 515.0
DYD3_k127_4174305_11 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007484 434.0
DYD3_k127_4174305_12 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005477 421.0
DYD3_k127_4174305_13 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 393.0
DYD3_k127_4174305_14 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 374.0
DYD3_k127_4174305_15 membrane-associated Zn-dependent proteases 1 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 371.0
DYD3_k127_4174305_16 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 356.0
DYD3_k127_4174305_17 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 354.0
DYD3_k127_4174305_18 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004271 344.0
DYD3_k127_4174305_19 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 353.0
DYD3_k127_4174305_2 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 9.974e-311 971.0
DYD3_k127_4174305_20 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007824 315.0
DYD3_k127_4174305_21 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K03941 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 308.0
DYD3_k127_4174305_22 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 298.0
DYD3_k127_4174305_23 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004427 294.0
DYD3_k127_4174305_24 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 295.0
DYD3_k127_4174305_25 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334,K03943 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008655 278.0
DYD3_k127_4174305_26 Protein of unknown function (DUF1009) K09949 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002809 265.0
DYD3_k127_4174305_27 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000685 261.0
DYD3_k127_4174305_28 Belongs to the complex I subunit 6 family K00339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000001913 243.0
DYD3_k127_4174305_29 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000009026 218.0
DYD3_k127_4174305_3 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 1.284e-284 889.0
DYD3_k127_4174305_30 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000007818 181.0
DYD3_k127_4174305_31 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000154 186.0
DYD3_k127_4174305_32 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000002639 179.0
DYD3_k127_4174305_33 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000002893 165.0
DYD3_k127_4174305_34 YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the K09780 - - 0.0000000000000000000000000000000006089 135.0
DYD3_k127_4174305_35 Outer membrane protein (OmpH-like) K06142 - - 0.000000000000000000000000000001446 128.0
DYD3_k127_4174305_36 SnoaL-like domain - - - 0.000000000000000000000000000003667 132.0
DYD3_k127_4174305_37 Glyoxalase-like domain - - - 0.000000000000000000000000000007691 126.0
DYD3_k127_4174305_38 - - - - 0.0000000000000001033 88.0
DYD3_k127_4174305_39 Protein of unknown function (DUF1467) - - - 0.0000000000000003164 82.0
DYD3_k127_4174305_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 1.141e-254 788.0
DYD3_k127_4174305_5 hydrolase of the metallo-beta-lactamase superfamily K12574 - - 2.355e-237 745.0
DYD3_k127_4174305_6 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.15 2.505e-234 736.0
DYD3_k127_4174305_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 7.883e-230 715.0
DYD3_k127_4174305_8 NADH ubiquinone oxidoreductase subunit K00342 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 6.891e-218 689.0
DYD3_k127_4174305_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 516.0
DYD3_k127_4184847_0 von Willebrand factor, type A K07114 - - 4.48e-240 767.0
DYD3_k127_4184847_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis - - - 2.88e-223 695.0
DYD3_k127_4184847_10 Transcriptional regulator - - - 0.000000000000000000000000000000000000001146 150.0
DYD3_k127_4184847_11 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000005295 130.0
DYD3_k127_4184847_12 - - - - 0.0000000000000000000000000000001786 140.0
DYD3_k127_4184847_13 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000493 121.0
DYD3_k127_4184847_14 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000008209 72.0
DYD3_k127_4184847_15 PFAM Glyoxalase bleomycin resistance protein dioxygenase K00446 - 1.13.11.2 0.00002547 56.0
DYD3_k127_4184847_2 Protein of unknown function (DUF3604) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 595.0
DYD3_k127_4184847_3 Aminotransferase K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 567.0
DYD3_k127_4184847_4 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 471.0
DYD3_k127_4184847_5 Dna alkylation repair - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 357.0
DYD3_k127_4184847_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 290.0
DYD3_k127_4184847_7 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000006049 241.0
DYD3_k127_4184847_8 Bacterial protein of unknown function (DUF924) - - - 0.00000000000000000000000000000000000000000000000000000000000009155 226.0
DYD3_k127_4184847_9 Aminoacyl-tRNA editing domain K03976 GO:0002161,GO:0003674,GO:0003824,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0043906,GO:0044237,GO:0044238,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000001467 209.0
DYD3_k127_4200761_0 cell division protein FtsK K03466 - - 7.078e-253 809.0
DYD3_k127_4200761_1 FAD binding domain K03185 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016491,GO:0019168,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901576,GO:1901661,GO:1901663 - 0.0000000000000000000000001988 108.0
DYD3_k127_4203124_0 ABC transporter K06158 - - 4.354e-249 783.0
DYD3_k127_4203124_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 8.68e-200 634.0
DYD3_k127_4203124_10 POTRA domain, FtsQ-type K03589 - - 0.00000000000000000000000000000000000000000000000005545 189.0
DYD3_k127_4203124_11 RimK-like ATP-grasp domain - - - 0.0000000000000000000000000000000003424 144.0
DYD3_k127_4203124_12 Putative restriction endonuclease - - - 0.0000000000000000000000000000000004636 138.0
DYD3_k127_4203124_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004018 460.0
DYD3_k127_4203124_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 447.0
DYD3_k127_4203124_4 Belongs to the D-alanine--D-alanine ligase family K00075,K01921 - 1.3.1.98,6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 414.0
DYD3_k127_4203124_5 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 389.0
DYD3_k127_4203124_6 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 385.0
DYD3_k127_4203124_7 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 362.0
DYD3_k127_4203124_8 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 352.0
DYD3_k127_4203124_9 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 347.0
DYD3_k127_4217803_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 3.14e-265 835.0
DYD3_k127_4217803_1 PQQ enzyme repeat - - - 5.245e-214 685.0
DYD3_k127_4217803_10 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009228 303.0
DYD3_k127_4217803_11 Predicted permease YjgP/YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008801 295.0
DYD3_k127_4217803_12 DNA polymerase III K02339 - 2.7.7.7 0.00000000000000000000000000000000000001677 165.0
DYD3_k127_4217803_13 Methyltransferase domain - - - 0.00000000000000000001149 102.0
DYD3_k127_4217803_14 Peptidase inhibitor I78 family - - - 0.000002305 59.0
DYD3_k127_4217803_2 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 584.0
DYD3_k127_4217803_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 518.0
DYD3_k127_4217803_4 Aminopeptidase K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 472.0
DYD3_k127_4217803_5 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 370.0
DYD3_k127_4217803_6 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 350.0
DYD3_k127_4217803_7 Predicted permease YjgP/YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006379 340.0
DYD3_k127_4217803_8 Chaperone SurA K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 314.0
DYD3_k127_4217803_9 rRNA (adenine-N6,N6-)-dimethyltransferase activity K15266 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 318.0
DYD3_k127_4233195_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1459.0
DYD3_k127_4233195_1 ATP-dependent DNA helicase RecG K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 1.085e-272 856.0
DYD3_k127_4233195_10 DNA-binding K03704 - - 0.0000000000000000000000000000000000000000001621 169.0
DYD3_k127_4233195_11 ETC complex I subunit conserved region K00329 - 1.6.5.3 0.000000000000000000000000000000000001036 141.0
DYD3_k127_4233195_12 Bacterial transglutaminase-like cysteine proteinase BTLCP - - - 0.0000000000000000000000000000000003774 139.0
DYD3_k127_4233195_13 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000001211 141.0
DYD3_k127_4233195_14 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000001371 139.0
DYD3_k127_4233195_15 Flavinator of succinate dehydrogenase K09159 - - 0.000000000000000000293 92.0
DYD3_k127_4233195_18 - - - - 0.0005888 46.0
DYD3_k127_4233195_2 haemagglutination activity domain - - - 3.335e-218 750.0
DYD3_k127_4233195_3 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007804 529.0
DYD3_k127_4233195_4 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01760 - 4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 361.0
DYD3_k127_4233195_5 Protein of unknown function (DUF3089) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 334.0
DYD3_k127_4233195_6 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004171 257.0
DYD3_k127_4233195_7 sulfurtransferase K01011 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009605,GO:0009987,GO:0009991,GO:0016740,GO:0016782,GO:0016783,GO:0016784,GO:0031668,GO:0033554,GO:0034641,GO:0042221,GO:0042262,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000138 260.0
DYD3_k127_4233195_8 TIGRFAM filamentous haemagglutinin family outer membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003438 277.0
DYD3_k127_4233195_9 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.00000000000000000000000000000000000000000000000000000000000000000001436 256.0
DYD3_k127_4244015_0 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007934 399.0
DYD3_k127_4244015_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 357.0
DYD3_k127_4244015_10 Protein of unknown function (DUF1674) - - - 0.000000000000000000004151 94.0
DYD3_k127_4244015_11 - - - - 0.00000000004835 75.0
DYD3_k127_4244015_13 SnoaL-like domain - - - 0.000009283 51.0
DYD3_k127_4244015_2 PFAM Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 295.0
DYD3_k127_4244015_3 Domain of unknown function (DUF697) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002422 270.0
DYD3_k127_4244015_4 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000001311 244.0
DYD3_k127_4244015_5 Belongs to the hyi family K01816 - 5.3.1.22 0.00000000000000000000000000000000000000000000000000000000008017 217.0
DYD3_k127_4244015_6 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000001045 167.0
DYD3_k127_4244015_7 SnoaL-like domain - - - 0.00000000000000000000000000000002316 141.0
DYD3_k127_4244015_8 SnoaL-like domain - - - 0.0000000000000000000000000003161 129.0
DYD3_k127_4244015_9 Staphylococcal nuclease homologue - - - 0.000000000000000000000005872 106.0
DYD3_k127_425198_0 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 352.0
DYD3_k127_425198_1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000002482 252.0
DYD3_k127_425198_2 Protein of unknown function (DUF2497) K09991 - - 0.0000000000000000000000001316 113.0
DYD3_k127_425198_3 Recombinase - - - 0.000000000000000151 82.0
DYD3_k127_4286325_0 Zinc carboxypeptidase - - - 4.699e-239 767.0
DYD3_k127_4286325_1 ABC transporter K06147 GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009507,GO:0009526,GO:0009536,GO:0009555,GO:0009657,GO:0009658,GO:0009889,GO:0009941,GO:0009987,GO:0010035,GO:0010038,GO:0010288,GO:0010380,GO:0016020,GO:0016043,GO:0018130,GO:0019222,GO:0019538,GO:0019637,GO:0019720,GO:0019725,GO:0019866,GO:0022622,GO:0030003,GO:0031090,GO:0031323,GO:0031326,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0042221,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046686,GO:0046916,GO:0048229,GO:0048364,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050790,GO:0050794,GO:0050801,GO:0050896,GO:0051171,GO:0051186,GO:0051188,GO:0051189,GO:0051193,GO:0051276,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0065009,GO:0071704,GO:0071840,GO:0090056,GO:0090407,GO:0098771,GO:0099402,GO:1901360,GO:1901362,GO:1901401,GO:1901463,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 546.0
DYD3_k127_4286325_2 Transposase - - - 0.0000000000000000000000000000000000001706 142.0
DYD3_k127_4298880_0 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 530.0
DYD3_k127_4298880_2 ankyrin repeat K15503 - - 0.00000000000000000000000000000000000000000000000000000000000000003796 240.0
DYD3_k127_4298880_3 - - - - 0.000000000000000000000000000000000000000000000000000002048 217.0
DYD3_k127_4298880_4 Penicillinase repressor - - - 0.000000000000000000000000318 109.0
DYD3_k127_4298880_5 COG0457 FOG TPR repeat - - - 0.00000000000000000000005448 115.0
DYD3_k127_4298880_6 - - - - 0.000000000000000000002284 99.0
DYD3_k127_4298880_7 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000264 106.0
DYD3_k127_4298880_8 - - - - 0.000000000000003262 78.0
DYD3_k127_4298880_9 - - - - 0.00000007156 57.0
DYD3_k127_4308097_0 AAA domain K07505 - - 0.000000000000000000000000000000008972 142.0
DYD3_k127_4311831_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1178.0
DYD3_k127_4311831_1 malic enzyme K00029 - 1.1.1.40 0.0 1061.0
DYD3_k127_4311831_10 enoyl-CoA hydratase K01692,K05605 - 3.1.2.4,4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 390.0
DYD3_k127_4311831_11 Sugar-transfer associated ATP-grasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 383.0
DYD3_k127_4311831_12 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 350.0
DYD3_k127_4311831_13 Short chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 325.0
DYD3_k127_4311831_14 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 329.0
DYD3_k127_4311831_15 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 313.0
DYD3_k127_4311831_16 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001244 267.0
DYD3_k127_4311831_17 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000004804 245.0
DYD3_k127_4311831_18 Domain of unknown function (DUF305) - - - 0.0000000000000000000000000000000000000000000000000000008297 204.0
DYD3_k127_4311831_19 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000703 188.0
DYD3_k127_4311831_2 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 9.711e-258 808.0
DYD3_k127_4311831_20 NADPH-quinone reductase (modulator of drug activity B) - - - 0.000000000000000000000000000000000000000000000000001388 188.0
DYD3_k127_4311831_21 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000004585 187.0
DYD3_k127_4311831_22 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000005009 172.0
DYD3_k127_4311831_23 Uncharacterized conserved protein (DUF2277) - - - 0.0000000000000000000000000000001381 130.0
DYD3_k127_4311831_24 Helix-turn-helix XRE-family like proteins K07729 - - 0.00000000000000000000000000002628 117.0
DYD3_k127_4311831_25 Putative ATP-dependant zinc protease - - - 0.0000000000000000000000000483 120.0
DYD3_k127_4311831_26 PFAM DNA polymerase beta domain protein region K07075 - - 0.000000000000000000000009343 105.0
DYD3_k127_4311831_27 Psort location Cytoplasmic, score 8.96 K00537 - 1.20.4.1 0.000000000000000000001285 99.0
DYD3_k127_4311831_28 Sensors of blue-light using FAD - - - 0.0000000000000000001404 98.0
DYD3_k127_4311831_29 translation initiation factor activity - - - 0.000000000000009413 79.0
DYD3_k127_4311831_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 3.299e-226 706.0
DYD3_k127_4311831_30 Protein of unknown function DUF86 - - - 0.00000000003036 71.0
DYD3_k127_4311831_31 Phage lysozyme K01185 - 3.2.1.17 0.0000000002415 73.0
DYD3_k127_4311831_32 Lysozyme inhibitor LprI - - - 0.0000000924 61.0
DYD3_k127_4311831_33 Putative restriction endonuclease - - - 0.0000314 48.0
DYD3_k127_4311831_34 - - - - 0.00009791 50.0
DYD3_k127_4311831_36 von willebrand factor, type A - - - 0.0003638 46.0
DYD3_k127_4311831_4 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 494.0
DYD3_k127_4311831_5 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 446.0
DYD3_k127_4311831_6 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 430.0
DYD3_k127_4311831_7 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 419.0
DYD3_k127_4311831_8 MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 410.0
DYD3_k127_4311831_9 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 373.0
DYD3_k127_4312395_0 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 1778.0
DYD3_k127_4312395_1 glutamate synthase, small subunit K00266 - 1.4.1.13,1.4.1.14 2.918e-198 629.0
DYD3_k127_4312395_2 Cys/Met metabolism PLP-dependent enzyme K01739 - 2.5.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 449.0
DYD3_k127_4312395_3 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 340.0
DYD3_k127_4312395_4 Belongs to the AB hydrolase superfamily. MetX family K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 307.0
DYD3_k127_4312395_5 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000000000000000000003236 227.0
DYD3_k127_4312395_6 Toxic component of a toxin-antitoxin (TA) module. An RNase K07062 - - 0.000000000000000000000000000000000000000000001223 188.0
DYD3_k127_4312395_7 DDE superfamily endonuclease - - - 0.00008702 45.0
DYD3_k127_4312754_0 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second K01958 - 6.4.1.1 0.0 1020.0
DYD3_k127_4312754_1 PQQ enzyme repeat K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006582 610.0
DYD3_k127_4312754_10 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001035 262.0
DYD3_k127_4312754_11 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 GO:0008150,GO:0042221,GO:0046677,GO:0050896 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000001323 257.0
DYD3_k127_4312754_12 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.00000000000000000000000000000000000000000000000000000000000000002672 233.0
DYD3_k127_4312754_13 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000002749 212.0
DYD3_k127_4312754_14 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000002499 165.0
DYD3_k127_4312754_15 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000002021 154.0
DYD3_k127_4312754_16 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000007381 146.0
DYD3_k127_4312754_17 SnoaL-like domain - - - 0.000000000000000000000000000001932 138.0
DYD3_k127_4312754_18 SnoaL-like domain - - - 0.0000000000000000000000000009575 129.0
DYD3_k127_4312754_19 Cupin domain - - - 0.0000000000000006394 84.0
DYD3_k127_4312754_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003962 522.0
DYD3_k127_4312754_20 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000002989 66.0
DYD3_k127_4312754_21 SnoaL-like domain - - - 0.000002559 60.0
DYD3_k127_4312754_3 Belongs to the TPP enzyme family K01576,K01652 - 2.2.1.6,4.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 500.0
DYD3_k127_4312754_4 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 379.0
DYD3_k127_4312754_5 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 357.0
DYD3_k127_4312754_6 NADH-quinone oxidoreductase K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 326.0
DYD3_k127_4312754_7 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000111 277.0
DYD3_k127_4312754_8 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004389 289.0
DYD3_k127_4312754_9 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000926 258.0
DYD3_k127_4315988_0 TIGRFAM maf protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000008156 219.0
DYD3_k127_4315988_1 Belongs to the UPF0262 family - - - 0.0000000000000000000000000000000000000000000000000001062 191.0
DYD3_k127_4315988_2 Translation initiation factor 1A / IF-1 K02518 - - 0.00000000000000000000000000000000001095 136.0
DYD3_k127_4315988_3 Low molecular weight phosphatase family K01104,K03741 - 1.20.4.1,3.1.3.48 0.000000000000000000000000000000002358 140.0
DYD3_k127_4315988_4 COG1530 Ribonucleases G and E - - - 0.00000000000000000002378 96.0
DYD3_k127_4320358_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008177 261.0
DYD3_k127_4320358_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004444 256.0
DYD3_k127_4320358_10 enzyme of the cupin superfamily - - - 0.00000000004025 76.0
DYD3_k127_4320358_11 - - - - 0.00000000006313 74.0
DYD3_k127_4320358_2 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001778 247.0
DYD3_k127_4320358_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000004503 206.0
DYD3_k127_4320358_4 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000002383 191.0
DYD3_k127_4320358_5 - - - - 0.0000000000000000000000000000000000000000000003411 185.0
DYD3_k127_4320358_6 - - - - 0.000000000000000000000000000003135 134.0
DYD3_k127_4320358_7 - - - - 0.0000000000000001531 87.0
DYD3_k127_4320358_8 - - - - 0.00000000000001783 87.0
DYD3_k127_4320358_9 - - - - 0.0000000000004312 81.0
DYD3_k127_4345300_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 1.032e-265 826.0
DYD3_k127_4345300_1 COG0811 Biopolymer transport proteins K03562 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0017038,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005962 276.0
DYD3_k127_4345300_2 ExbD TolR family transport energizing protein K03559,K03560 - - 0.000000000000000000000000000000000000000003569 162.0
DYD3_k127_4345300_3 Tol-pal system-associated acyl-CoA thioesterase K07107 - - 0.0000000000000000000000000000000000000001321 157.0
DYD3_k127_4345300_4 cAMP biosynthetic process - - - 0.000000000000001029 89.0
DYD3_k127_4345300_5 Cell division and transport-associated protein TolA K03646 - - 0.000001824 53.0
DYD3_k127_4374175_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.179 7.78e-212 664.0
DYD3_k127_4374175_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 584.0
DYD3_k127_4374175_10 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003073 275.0
DYD3_k127_4374175_11 stress-induced protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009469 280.0
DYD3_k127_4374175_12 Binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000000001091 219.0
DYD3_k127_4374175_13 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000009551 154.0
DYD3_k127_4374175_14 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000002638 135.0
DYD3_k127_4374175_15 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000003042 133.0
DYD3_k127_4374175_16 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH K07746 - - 0.00000000000000008817 84.0
DYD3_k127_4374175_17 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000002087 84.0
DYD3_k127_4374175_18 ParE toxin of type II toxin-antitoxin system, parDE K19092 - - 0.00000000000005654 76.0
DYD3_k127_4374175_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007963 372.0
DYD3_k127_4374175_3 malonyl CoA-acyl carrier protein transacylase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008354 357.0
DYD3_k127_4374175_4 Amidohydrolase K07045,K14333,K20941 - 4.1.1.103,4.1.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 360.0
DYD3_k127_4374175_5 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 359.0
DYD3_k127_4374175_6 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 340.0
DYD3_k127_4374175_7 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 327.0
DYD3_k127_4374175_8 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007027 316.0
DYD3_k127_4374175_9 AAA domain, putative AbiEii toxin, Type IV TA system K20459 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 297.0
DYD3_k127_4375162_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.0 1036.0
DYD3_k127_4375162_1 Proton-conducting membrane transporter - - - 1.851e-261 822.0
DYD3_k127_4375162_10 COG4237 Hydrogenase 4 membrane component (E) K12140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 353.0
DYD3_k127_4375162_11 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002021 284.0
DYD3_k127_4375162_12 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002516 262.0
DYD3_k127_4375162_13 [2Fe-2S] binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008859 250.0
DYD3_k127_4375162_14 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000002264 224.0
DYD3_k127_4375162_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000008725 231.0
DYD3_k127_4375162_16 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000001072 172.0
DYD3_k127_4375162_17 Helix-turn-helix - - - 0.000000000000000000000000000000000001973 141.0
DYD3_k127_4375162_18 Type III restriction enzyme, res subunit - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000001845 145.0
DYD3_k127_4375162_19 Helix-turn-helix - - - 0.0000000000000000000000000000006324 123.0
DYD3_k127_4375162_2 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs K11177 - 1.17.1.4 4.629e-250 791.0
DYD3_k127_4375162_20 Zinc-finger domain - - - 0.00000000000000000003526 103.0
DYD3_k127_4375162_21 - - - - 0.00000000000000000008436 98.0
DYD3_k127_4375162_22 - - - - 0.00000000000000002264 94.0
DYD3_k127_4375162_23 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000004363 77.0
DYD3_k127_4375162_24 Protein of unknown function (DUF983) - - - 0.00000000000127 77.0
DYD3_k127_4375162_25 Predicted membrane protein (DUF2306) - - - 0.00000000003003 72.0
DYD3_k127_4375162_26 Serine aminopeptidase, S33 - - - 0.0000001901 54.0
DYD3_k127_4375162_3 PFAM NADH Ubiquinone plastoquinone (complex I) K12141 - - 2.97e-237 747.0
DYD3_k127_4375162_4 belongs to the thioredoxin family - - - 9.957e-234 730.0
DYD3_k127_4375162_5 PFAM HipA domain protein K07154 - 2.7.11.1 3.038e-222 694.0
DYD3_k127_4375162_6 NADH-ubiquinone oxidoreductase chain 49kDa - - - 2.879e-219 702.0
DYD3_k127_4375162_7 AAA domain K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003693 482.0
DYD3_k127_4375162_8 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 449.0
DYD3_k127_4375162_9 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 436.0
DYD3_k127_4401620_0 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 570.0
DYD3_k127_4401620_1 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 341.0
DYD3_k127_4401620_2 PIN domain - - - 0.0000000000000000000000000000000001416 138.0
DYD3_k127_4401620_3 Protein of unknown function (DUF2442) - - - 0.000000000000000000000000000002858 121.0
DYD3_k127_4401620_4 SpoVT / AbrB like domain - - - 0.00000000000000000007823 91.0
DYD3_k127_4401620_5 Domain of unknown function (DUF4160) - - - 0.0000000000000003206 80.0
DYD3_k127_4410949_0 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 569.0
DYD3_k127_4410949_1 Glycosyltransferase like family 2 K16555 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007948 542.0
DYD3_k127_4410949_10 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000001286 241.0
DYD3_k127_4410949_11 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000038 214.0
DYD3_k127_4410949_12 COG1596 Periplasmic protein involved in polysaccharide export K01991 - - 0.000000000000000000000000000000000000000000000000007928 188.0
DYD3_k127_4410949_13 PFAM O-Antigen K16567 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000004054 177.0
DYD3_k127_4410949_14 Phosphopantetheine attachment site - - - 0.000000000000000000000003024 106.0
DYD3_k127_4410949_15 GtrA-like protein - - - 0.0000000000000000001292 102.0
DYD3_k127_4410949_16 - - - - 0.000000000000000007943 86.0
DYD3_k127_4410949_2 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 456.0
DYD3_k127_4410949_3 Chain length determinant family protein K16554 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007402 458.0
DYD3_k127_4410949_4 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 448.0
DYD3_k127_4410949_5 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 405.0
DYD3_k127_4410949_6 Glycosyl hydrolases family 16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007562 391.0
DYD3_k127_4410949_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009109 394.0
DYD3_k127_4410949_8 PFAM Glycosyl transferase family 2 K16557 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 319.0
DYD3_k127_4410949_9 transferase activity, transferring glycosyl groups K16558 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 293.0
DYD3_k127_4430063_0 DNA topological change K03168 - 5.99.1.2 9.829e-198 646.0
DYD3_k127_4430063_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K18661 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 543.0
DYD3_k127_4430063_10 - - - - 0.00000000000000000000000002006 122.0
DYD3_k127_4430063_11 - - - - 0.000000000000000000000003197 115.0
DYD3_k127_4430063_12 - - - - 0.0000000000001879 81.0
DYD3_k127_4430063_14 - - - - 0.000000009148 62.0
DYD3_k127_4430063_2 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 372.0
DYD3_k127_4430063_3 Major facilitator superfamily K05548,K08195,K08369 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 309.0
DYD3_k127_4430063_4 response to abiotic stimulus K06867 - - 0.000000000000000000000000000000000000000000000000000000000000000000001289 265.0
DYD3_k127_4430063_5 -O-antigen K02847 - - 0.0000000000000000000000000000000000000000000000000000005687 221.0
DYD3_k127_4430063_6 Belongs to the Dps family K04047 - - 0.000000000000000000000000000000000000000000000000000002879 199.0
DYD3_k127_4430063_7 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000001423 194.0
DYD3_k127_4430063_8 KR domain - - - 0.000000000000000000000000000000000000000000000623 180.0
DYD3_k127_4430063_9 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000003711 119.0
DYD3_k127_4437411_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1304.0
DYD3_k127_4437411_1 2-methylcitrate dehydratase K01720 - 4.2.1.79 1.615e-268 840.0
DYD3_k127_4437411_10 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000000000000000000000000000000000004413 204.0
DYD3_k127_4437411_11 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.00000000000000000000003402 113.0
DYD3_k127_4437411_12 Esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000001062 112.0
DYD3_k127_4437411_13 nUDIX hydrolase K01515,K12945 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0043167,GO:0043169,GO:0046872,GO:0052751 3.6.1.13 0.0000000000000002991 91.0
DYD3_k127_4437411_14 - - - - 0.000000244 60.0
DYD3_k127_4437411_2 Belongs to the citrate synthase family K01647,K01659 - 2.3.3.1,2.3.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 582.0
DYD3_k127_4437411_3 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007167 500.0
DYD3_k127_4437411_4 TonB-dependent Receptor Plug Domain K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 435.0
DYD3_k127_4437411_5 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008493 379.0
DYD3_k127_4437411_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 354.0
DYD3_k127_4437411_7 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 334.0
DYD3_k127_4437411_8 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 330.0
DYD3_k127_4437411_9 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005007 293.0
DYD3_k127_4442443_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 449.0
DYD3_k127_4442443_1 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 306.0
DYD3_k127_4442443_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002555 269.0
DYD3_k127_4448597_0 XdhC and CoxI family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000003056 225.0
DYD3_k127_448502_0 AcrB/AcrD/AcrF family - - - 2.368e-289 922.0
DYD3_k127_448502_1 Patatin phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051 498.0
DYD3_k127_448502_2 KR domain K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005807 386.0
DYD3_k127_448502_3 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 356.0
DYD3_k127_448502_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K21137 - - 0.00000000000000000000000000000000000000000000000000000000000001689 229.0
DYD3_k127_4485230_0 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 529.0
DYD3_k127_4485230_1 COG1398 Fatty-acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 450.0
DYD3_k127_4485230_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000097 262.0
DYD3_k127_4485230_3 Histidine kinase K00936 - 2.7.13.3 0.0000000000000000000000002067 110.0
DYD3_k127_4495998_0 von Willebrand factor type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000174 295.0
DYD3_k127_4495998_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000003117 221.0
DYD3_k127_4535552_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.8.1.4 7.331e-221 692.0
DYD3_k127_4535552_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K05939 - 2.3.1.40,6.2.1.20 3.17e-215 683.0
DYD3_k127_4535552_10 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006464,GO:0006468,GO:0006518,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018105,GO:0018193,GO:0018209,GO:0019001,GO:0019222,GO:0019538,GO:0019843,GO:0022411,GO:0030554,GO:0031323,GO:0031326,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0032790,GO:0032984,GO:0032988,GO:0034248,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0036211,GO:0036289,GO:0043021,GO:0043022,GO:0043023,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006481 476.0
DYD3_k127_4535552_11 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 385.0
DYD3_k127_4535552_12 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 346.0
DYD3_k127_4535552_13 MazG nucleotide pyrophosphohydrolase domain K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 341.0
DYD3_k127_4535552_14 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007111 339.0
DYD3_k127_4535552_15 TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 324.0
DYD3_k127_4535552_16 UPF0056 membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000468 255.0
DYD3_k127_4535552_17 Nodulation protein S (NodS) - - - 0.000000000000000000000000000000000000000000000000000000000000000000003639 245.0
DYD3_k127_4535552_18 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000001206 209.0
DYD3_k127_4535552_19 DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000009333 195.0
DYD3_k127_4535552_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00162 - 1.2.4.1 6.471e-208 654.0
DYD3_k127_4535552_20 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000000005571 189.0
DYD3_k127_4535552_21 Polyketide cyclase / dehydrase and lipid transport K18588 - - 0.000000000000000000000000000000000000000013 158.0
DYD3_k127_4535552_22 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0006807,GO:0008150,GO:0008152,GO:0009399,GO:0071941,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000002986 147.0
DYD3_k127_4535552_23 glyoxalase III activity - - - 0.0000000000000000000000006401 117.0
DYD3_k127_4535552_24 FRG domain - - - 0.00000000000000000002759 106.0
DYD3_k127_4535552_25 Septum formation initiator - - - 0.000000000000002859 78.0
DYD3_k127_4535552_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13599 - - 2.573e-204 647.0
DYD3_k127_4535552_4 COG0569 K transport systems, NAD-binding component K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009088 588.0
DYD3_k127_4535552_5 Signal transduction histidine kinase K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 601.0
DYD3_k127_4535552_6 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 561.0
DYD3_k127_4535552_7 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007843 519.0
DYD3_k127_4535552_8 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 506.0
DYD3_k127_4535552_9 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 507.0
DYD3_k127_4568961_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 1.484e-247 778.0
DYD3_k127_4568961_1 Outer membrane protein beta-barrel family K16089 - - 4.785e-236 751.0
DYD3_k127_4568961_10 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 305.0
DYD3_k127_4568961_11 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008951 267.0
DYD3_k127_4568961_12 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000004624 225.0
DYD3_k127_4568961_13 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000004551 214.0
DYD3_k127_4568961_14 - - - - 0.00000000000000000000000000000000000000000000001633 175.0
DYD3_k127_4568961_15 - - - - 0.0000000000000000000000000000000000000000001147 179.0
DYD3_k127_4568961_16 Penicillinase repressor - - - 0.000000000000000000000000000000000000006386 148.0
DYD3_k127_4568961_17 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.00000000000000000000000000000001559 134.0
DYD3_k127_4568961_18 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000005019 118.0
DYD3_k127_4568961_19 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000001121 119.0
DYD3_k127_4568961_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - GO:0003674,GO:0003700,GO:0004857,GO:0006355,GO:0008073,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010967,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033238,GO:0042979,GO:0043086,GO:0044092,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 1.261e-213 672.0
DYD3_k127_4568961_20 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000003046 114.0
DYD3_k127_4568961_21 cheY-homologous receiver domain - - - 0.00000000000000000004093 97.0
DYD3_k127_4568961_22 nuclease - - - 0.000000000000000006344 94.0
DYD3_k127_4568961_23 Outer membrane protein beta-barrel domain - - - 0.00000000000000004032 89.0
DYD3_k127_4568961_24 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000005082 76.0
DYD3_k127_4568961_25 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.000000000003277 71.0
DYD3_k127_4568961_27 - - - - 0.000003599 53.0
DYD3_k127_4568961_3 pfam abc1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 589.0
DYD3_k127_4568961_4 (GMC) oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 536.0
DYD3_k127_4568961_5 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 467.0
DYD3_k127_4568961_6 With MotB forms the ion channels that couple flagellar rotation to proton sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 449.0
DYD3_k127_4568961_7 Lytic murein transglycosylase K00786,K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007898 395.0
DYD3_k127_4568961_8 3-phytase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 325.0
DYD3_k127_4568961_9 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 325.0
DYD3_k127_4578758_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 4.525e-218 697.0
DYD3_k127_4578758_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 499.0
DYD3_k127_4578758_2 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 425.0
DYD3_k127_4578758_3 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 346.0
DYD3_k127_4578758_4 Belongs to the Dps family K04047 - - 0.00000000000000000000000000000000000000000000000000000000000001701 218.0
DYD3_k127_4578758_5 MAPEG family - - - 0.00000000000000000000000000000567 123.0
DYD3_k127_4578758_6 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.00000000000000000000001855 106.0
DYD3_k127_4605487_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 5.711e-271 845.0
DYD3_k127_4605487_1 Insulinase (Peptidase family M16) K07263 - - 9.081e-265 846.0
DYD3_k127_4605487_10 COGs COG5616 integral membrane protein - - - 0.000005699 56.0
DYD3_k127_4605487_2 COG1629 Outer membrane receptor proteins, mostly Fe transport K16090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 548.0
DYD3_k127_4605487_3 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K07516 - 1.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 439.0
DYD3_k127_4605487_4 Receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 420.0
DYD3_k127_4605487_5 Bacterial regulatory protein, Fis family K02481,K07713,K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005669 322.0
DYD3_k127_4605487_6 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005767 312.0
DYD3_k127_4605487_7 Prolyl 4-hydroxylase alpha subunit homologues. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 302.0
DYD3_k127_4605487_8 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001425 261.0
DYD3_k127_4605487_9 Beta-lactamase superfamily domain K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000344 214.0
DYD3_k127_4627287_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1553.0
DYD3_k127_4627287_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004517 243.0
DYD3_k127_4627287_2 hydrolase activity, hydrolyzing N-glycosyl compounds K09935 - - 0.00000000000000000000000000000000000000000009222 168.0
DYD3_k127_4627287_3 Domain of unknown function DUF29 - - - 0.0000000000000000000000000000003545 127.0
DYD3_k127_4627287_4 Mitochondrial fission ELM1 K07276 - - 0.0000000000000000000003117 101.0
DYD3_k127_4627287_5 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000001361 64.0
DYD3_k127_4664780_0 COG1770 Protease II K01354 - 3.4.21.83 7.383e-257 813.0
DYD3_k127_4664780_1 COG0651 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K05568 - - 1.162e-217 690.0
DYD3_k127_4664780_10 Na+/H+ antiporter subunit K05571 - - 0.000000000000000000000000000000005495 137.0
DYD3_k127_4664780_11 Multiple resistance and pH regulation protein F K05570 - - 0.0000000000000000000000000001469 123.0
DYD3_k127_4664780_13 DDE superfamily endonuclease - - - 0.000003752 49.0
DYD3_k127_4664780_2 COG0651 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K00343,K05568 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 591.0
DYD3_k127_4664780_3 COG0651 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K00341,K05568 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 565.0
DYD3_k127_4664780_4 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 365.0
DYD3_k127_4664780_5 COG2111 Multisubunit Na H antiporter, MnhB subunit K05566 - - 0.0000000000000000000000000000000000000000000000000000000000001846 218.0
DYD3_k127_4664780_6 COG2111 Multisubunit Na H antiporter, MnhB subunit K05566 - - 0.000000000000000000000000000000000000000000000000000000000001172 216.0
DYD3_k127_4664780_7 peptide methionine sulfoxide reductase K07305 - 1.8.4.12 0.000000000000000000000000000000000000000003948 166.0
DYD3_k127_4664780_8 COG1863 Multisubunit Na H antiporter, MnhE subunit K05569 - - 0.000000000000000000000000000000000000004134 152.0
DYD3_k127_4664780_9 COG1006 Multisubunit Na H antiporter, MnhC subunit K05567 - - 0.00000000000000000000000000000000000002443 150.0
DYD3_k127_4681674_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1077.0
DYD3_k127_4681674_1 Dehydrogenase K17760 - 1.1.9.1 1.515e-222 724.0
DYD3_k127_4681674_10 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 339.0
DYD3_k127_4681674_11 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005078 312.0
DYD3_k127_4681674_12 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 312.0
DYD3_k127_4681674_13 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004269 279.0
DYD3_k127_4681674_14 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001374 267.0
DYD3_k127_4681674_15 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000002354 246.0
DYD3_k127_4681674_16 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000002235 226.0
DYD3_k127_4681674_17 PFAM Mo-dependent nitrogenase - - - 0.0000000000000000000000000000000000000000101 158.0
DYD3_k127_4681674_18 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000005198 149.0
DYD3_k127_4681674_19 Ferric uptake regulator family K09826 - - 0.00000000000000000000000000000000000000139 154.0
DYD3_k127_4681674_2 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006714 559.0
DYD3_k127_4681674_20 Bacterial SH3 domain - - - 0.000000000000000000000000000000000000001545 153.0
DYD3_k127_4681674_21 - - - - 0.0000000000000000000000000000000001035 140.0
DYD3_k127_4681674_22 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000002436 141.0
DYD3_k127_4681674_23 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000002855 136.0
DYD3_k127_4681674_24 Cro/C1-type HTH DNA-binding domain K07727 - - 0.0000000000000000000000000006275 117.0
DYD3_k127_4681674_25 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000002431 113.0
DYD3_k127_4681674_26 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000000000000006509 108.0
DYD3_k127_4681674_27 transcriptional regulator K07172 - - 0.0000000000000000000002835 100.0
DYD3_k127_4681674_28 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000003211 79.0
DYD3_k127_4681674_29 Protein of unknown function (DUF2975) - - - 0.000000000003477 74.0
DYD3_k127_4681674_3 Beta-ketoacyl synthase, C-terminal domain K00647 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 539.0
DYD3_k127_4681674_4 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 471.0
DYD3_k127_4681674_5 Enoyl- acyl-carrier-protein reductase NADH K00208 GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901576 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008875 422.0
DYD3_k127_4681674_6 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008044 412.0
DYD3_k127_4681674_7 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 404.0
DYD3_k127_4681674_8 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 404.0
DYD3_k127_4681674_9 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 403.0
DYD3_k127_4682013_0 TonB-dependent receptor K02014 - - 0.0 1070.0
DYD3_k127_4682013_1 Transcriptional regulator, gntR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 291.0
DYD3_k127_4708605_0 Belongs to the LDH2 MDH2 oxidoreductase family K13574 - - 0.0000000000000000000000000000000000000000000000000001262 195.0
DYD3_k127_4708605_1 PFAM transposase IS4 family protein - - - 0.00000000000000000000000000003838 132.0
DYD3_k127_4739820_0 FlhB HrpN YscU SpaS family protein K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 344.0
DYD3_k127_4739820_1 Role in flagellar biosynthesis K02421 - - 0.0000000000000000000000000000000000000000000000000000000000003928 219.0
DYD3_k127_4739820_2 Flagellar biosynthesis K02420 - - 0.00000000000000000000000005029 113.0
DYD3_k127_4739820_3 Histidine kinase K13587 - 2.7.13.3 0.000000000000426 77.0
DYD3_k127_4742825_0 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 314.0
DYD3_k127_4742825_1 Extensin-like protein C-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000001258 238.0
DYD3_k127_4742825_2 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000007007 193.0
DYD3_k127_4742825_3 Methyltransferase - - - 0.00000000000000000000000000000000000000000001472 174.0
DYD3_k127_4742825_4 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000006589 107.0
DYD3_k127_4828982_0 DEAD DEAH box helicase K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009401 464.0
DYD3_k127_4828982_1 Sortase family K07284 - 3.4.22.70 0.000000000000000000000000000000000000000000000000000000357 199.0
DYD3_k127_4831587_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1154.0
DYD3_k127_4831587_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 2.559e-242 755.0
DYD3_k127_4831587_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 304.0
DYD3_k127_4831587_11 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004727 285.0
DYD3_k127_4831587_12 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000003963 220.0
DYD3_k127_4831587_13 - - - - 0.000000000000000000000000000000000000000000000000000000000001555 229.0
DYD3_k127_4831587_14 ferredoxin - - - 0.000000000000000000000000000000000000000000000000321 177.0
DYD3_k127_4831587_15 - - - - 0.00000000000000000000000000000000000000000000000122 196.0
DYD3_k127_4831587_16 Rhodanese Homology Domain K00529 - 1.18.1.3 0.000000000000000000000000000000000000000000000009762 175.0
DYD3_k127_4831587_17 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000006548 166.0
DYD3_k127_4831587_18 PTS fructose transporter subunit IIA K02793 - 2.7.1.191 0.00000000000000000000000000000000000000005728 156.0
DYD3_k127_4831587_19 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000002452 143.0
DYD3_k127_4831587_2 Tyrosine kinase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 3.895e-224 721.0
DYD3_k127_4831587_20 Penicillinase repressor - - - 0.0000000000000000000000000000000003592 136.0
DYD3_k127_4831587_21 COG1846 Transcriptional regulators - - - 0.000000000000000000000000000000001268 134.0
DYD3_k127_4831587_22 - - - - 0.000000000000000000000000000000002442 138.0
DYD3_k127_4831587_23 Phage lysozyme K01185 - 3.2.1.17 0.00000000000000000000000000006855 123.0
DYD3_k127_4831587_24 Gram-negative bacterial TonB protein C-terminal - - - 0.000000000000000000000000001981 119.0
DYD3_k127_4831587_25 PFAM Peptidase M56, BlaR1 - - - 0.00000000000000000000178 110.0
DYD3_k127_4831587_26 - - - - 0.00000000000000004864 94.0
DYD3_k127_4831587_27 Protein of unknown function, DUF255 - - - 0.0000000000000001062 89.0
DYD3_k127_4831587_28 phosphocarrier protein HPr K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006808,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0044424,GO:0044464,GO:0050789,GO:0051179,GO:0051234,GO:0065007,GO:0071702 - 0.00000000000000256 85.0
DYD3_k127_4831587_29 - - - - 0.00000000001798 76.0
DYD3_k127_4831587_3 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 493.0
DYD3_k127_4831587_30 - - - - 0.0000000001099 70.0
DYD3_k127_4831587_31 - - - - 0.000000001012 70.0
DYD3_k127_4831587_33 DDE superfamily endonuclease - - - 0.000003752 49.0
DYD3_k127_4831587_34 Lysin motif - - - 0.0001107 52.0
DYD3_k127_4831587_35 cyclic-guanylate-specific phosphodiesterase activity - - - 0.0001385 53.0
DYD3_k127_4831587_4 Histidine kinase K14980 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 460.0
DYD3_k127_4831587_5 Sensory box sensor histidine kinase response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 393.0
DYD3_k127_4831587_6 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K14981 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009837 381.0
DYD3_k127_4831587_7 Acyltransferase family K11941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 354.0
DYD3_k127_4831587_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005877 344.0
DYD3_k127_4831587_9 Cache domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006445 307.0
DYD3_k127_4850233_0 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 494.0
DYD3_k127_4850233_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003165 250.0
DYD3_k127_4874751_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009603 475.0
DYD3_k127_4874751_1 FecR protein - - - 0.00000000000002999 77.0
DYD3_k127_4894314_0 Pyruvate ferredoxin flavodoxin oxidoreductase K00179,K04090 - 1.2.7.8 0.0 1243.0
DYD3_k127_4894314_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 553.0
DYD3_k127_4894314_10 beta-lactamase K01467 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 338.0
DYD3_k127_4894314_11 helix_turn_helix ASNC type K05800 - - 0.000000000000000000000000000000000000000000000000000000000000000000001345 239.0
DYD3_k127_4894314_12 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000007003 239.0
DYD3_k127_4894314_13 helix_turn_helix isocitrate lyase regulation K02624 - - 0.00000000000000000000000000000000000000000000000000000000002582 220.0
DYD3_k127_4894314_14 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.0000000000000000000000000000000000000000000000000001241 194.0
DYD3_k127_4894314_15 COG1344 Flagellin and related hook-associated proteins K02397 - - 0.00000000000000000000000000000000000000004491 173.0
DYD3_k127_4894314_16 Protein of unknown function (DUF1153) - - - 0.0000000000000000000000000000000000000001353 154.0
DYD3_k127_4894314_17 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000704 158.0
DYD3_k127_4894314_18 Flagellar hook-length control protein FliK K02414,K10565 - - 0.0000000000000000002466 102.0
DYD3_k127_4894314_19 Dodecin - - - 0.00000000000000001071 88.0
DYD3_k127_4894314_2 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009024 554.0
DYD3_k127_4894314_3 DNA topological change - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 559.0
DYD3_k127_4894314_4 Belongs to the flagella basal body rod proteins family K02396 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007865 538.0
DYD3_k127_4894314_5 flagellar motor switch protein K02410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 496.0
DYD3_k127_4894314_6 Flagellar hook protein FlgE K02390 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 492.0
DYD3_k127_4894314_7 COG0477 Permeases of the major facilitator superfamily K08151 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006547 473.0
DYD3_k127_4894314_8 The M ring may be actively involved in energy transduction K02409 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 454.0
DYD3_k127_4894314_9 Uncharacterised MFS-type transporter YbfB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003894 355.0
DYD3_k127_4916819_0 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 - 1.3.99.16 4.71e-221 710.0
DYD3_k127_4916819_1 Glucose dehydrogenase K00117,K05358 - 1.1.5.2,1.1.5.8 9.905e-215 690.0
DYD3_k127_4916819_10 - - - - 0.000000000000000000000000002505 122.0
DYD3_k127_4916819_11 Cytochrome c - - - 0.000000000000000000000115 103.0
DYD3_k127_4916819_12 SnoaL-like domain - - - 0.0000000004993 71.0
DYD3_k127_4916819_13 - - - - 0.0000004548 53.0
DYD3_k127_4916819_14 - - - - 0.000124 51.0
DYD3_k127_4916819_2 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 357.0
DYD3_k127_4916819_3 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 314.0
DYD3_k127_4916819_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 310.0
DYD3_k127_4916819_5 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000004623 224.0
DYD3_k127_4916819_6 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K01501,K12251 - 3.5.1.53,3.5.5.1 0.000000000000000000000000000000000000000000000000000000000001016 218.0
DYD3_k127_4916819_7 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0000000000000000000000000000000000000000000000001475 179.0
DYD3_k127_4916819_8 Cupin domain - - - 0.000000000000000000000000000000000000000000002794 169.0
DYD3_k127_4916819_9 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000006703 150.0
DYD3_k127_4931080_0 COG0303 Molybdopterin biosynthesis enzyme K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005711 357.0
DYD3_k127_4931080_1 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 331.0
DYD3_k127_4931080_2 Binding-protein-dependent transport system inner membrane component K02018 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009672 307.0
DYD3_k127_4931080_3 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000003928 235.0
DYD3_k127_4931080_4 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000003185 205.0
DYD3_k127_4931080_5 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.000000000000000000000000000000000000013 149.0
DYD3_k127_4931080_6 Transposase and inactivated K07492 - - 0.00002419 46.0
DYD3_k127_4944549_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18989 - - 0.0 1049.0
DYD3_k127_4944549_1 DNA topological change - - - 1.347e-214 692.0
DYD3_k127_4944549_10 Bacterial PH domain - - - 0.000000000000000000000000009413 117.0
DYD3_k127_4944549_11 COG2198 FOG HPt domain - - - 0.00000000000000003541 87.0
DYD3_k127_4944549_12 Tripartite tricarboxylate transporter TctB family - - - 0.0001788 53.0
DYD3_k127_4944549_2 COG1960 Acyl-CoA dehydrogenases K09456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 589.0
DYD3_k127_4944549_3 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 558.0
DYD3_k127_4944549_4 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 368.0
DYD3_k127_4944549_5 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001347 269.0
DYD3_k127_4944549_6 PFAM helix-turn-helix- domain containing protein AraC type - - - 0.000000000000000000000000000000000000000000000000000000001893 222.0
DYD3_k127_4944549_7 transcriptional regulator K02624,K13641 - - 0.0000000000000000000000000000000000000000000000000000009066 205.0
DYD3_k127_4944549_8 Ankyrin repeat - - - 0.00000000000000000000000000000000000000000002163 181.0
DYD3_k127_4944549_9 Haem-degrading - - - 0.00000000000000000000000000000003739 130.0
DYD3_k127_5020443_0 COG4553 Poly-beta-hydroxyalkanoate depolymerase K05973 - 3.1.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 557.0
DYD3_k127_5020443_1 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 567.0
DYD3_k127_5020443_10 Aconitase family (aconitate hydratase) K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000503 222.0
DYD3_k127_5020443_11 PFAM MaoC domain protein dehydratase - - - 0.000000000000000000000000000000000000000000000000000004547 197.0
DYD3_k127_5020443_12 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000000000000000000004413 194.0
DYD3_k127_5020443_13 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000000000000000000003193 195.0
DYD3_k127_5020443_14 Zincin-like metallopeptidase - - - 0.00000000000000000000000000000000000000000000000001697 183.0
DYD3_k127_5020443_15 Protein of unknown function (DUF1223) - - - 0.0000000000000000000000000000000000000000000000000227 188.0
DYD3_k127_5020443_16 SCO1/SenC K07152 - - 0.0000000000000000000000000000000000000000000000001121 187.0
DYD3_k127_5020443_17 Sel1-like repeats. - - - 0.000000000000000000000000000000000000002876 167.0
DYD3_k127_5020443_18 DNA repair protein MmcB-like - - - 0.000000000000000000000000000000000000009357 165.0
DYD3_k127_5020443_19 Protein of unknown function (DUF2794) - - - 0.00000000000000000000000000000000001472 144.0
DYD3_k127_5020443_2 ABC-type uncharacterized transport system K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 424.0
DYD3_k127_5020443_20 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K04082,K05516 - - 0.000000000000000000000000000000001149 149.0
DYD3_k127_5020443_21 - - - - 0.00000000000000000000000000000001927 144.0
DYD3_k127_5020443_22 Domain of unknown function (DUF4340) - - - 0.00000000000000000000000000000002143 144.0
DYD3_k127_5020443_23 Cro/C1-type HTH DNA-binding domain K07727 - - 0.000000000000000000000000002506 112.0
DYD3_k127_5020443_24 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.0000000000000000002135 99.0
DYD3_k127_5020443_25 - - - - 0.000000000000004286 78.0
DYD3_k127_5020443_3 His Kinase A (phosphoacceptor) domain K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 386.0
DYD3_k127_5020443_4 NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008247 325.0
DYD3_k127_5020443_5 Belongs to the BI1 family K06890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 297.0
DYD3_k127_5020443_6 COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 GO:0000156,GO:0000160,GO:0003674,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0023052,GO:0035556,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003425 280.0
DYD3_k127_5020443_7 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001549 281.0
DYD3_k127_5020443_8 Protein of unknown function (DUF1524) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001317 286.0
DYD3_k127_5020443_9 ABC transporter permease K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001229 275.0
DYD3_k127_5071406_0 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 295.0
DYD3_k127_5071406_1 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.0000000000000000000000000000000000000000000000000000000006424 214.0
DYD3_k127_5071406_2 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000001583 184.0
DYD3_k127_5071406_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000002158 100.0
DYD3_k127_5071406_4 transcriptional regulator - - - 0.00000000000000000003153 93.0
DYD3_k127_5071406_5 - - - - 0.00000000000000000004227 97.0
DYD3_k127_509023_0 RQC K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000007152 248.0
DYD3_k127_509023_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000004652 119.0
DYD3_k127_509023_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000008499 57.0
DYD3_k127_509582_0 Retinal pigment epithelial membrane protein - - - 8.651e-211 663.0
DYD3_k127_509582_1 Transcriptional regulatory protein, C terminal - - - 7.422e-204 666.0
DYD3_k127_509582_10 Protein of unknown function (DUF2924) - - - 0.000000000000000000000000001019 119.0
DYD3_k127_509582_11 YGGT family K02221 - - 0.0000000000000000000001575 101.0
DYD3_k127_509582_12 - - - - 0.00000000000000000003285 96.0
DYD3_k127_509582_13 - - - - 0.0000000000000000002603 101.0
DYD3_k127_509582_14 Belongs to the UPF0235 family K09131 - - 0.0000000000000000009377 89.0
DYD3_k127_509582_17 - - - - 0.000003493 59.0
DYD3_k127_509582_18 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000004376 55.0
DYD3_k127_509582_2 Belongs to the aldehyde dehydrogenase family K00154,K22445 - 1.2.1.68,1.2.99.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 581.0
DYD3_k127_509582_3 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 568.0
DYD3_k127_509582_4 Recombinase K06400 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 492.0
DYD3_k127_509582_5 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006688 457.0
DYD3_k127_509582_6 Serine aminopeptidase, S33 K00433 - 1.11.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009606 452.0
DYD3_k127_509582_7 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 430.0
DYD3_k127_509582_8 light absorption - - - 0.00000000000000000000000000000000000000000000007892 173.0
DYD3_k127_509582_9 - - - - 0.00000000000000000000000000000444 130.0
DYD3_k127_5103875_0 glucose sorbosone K00117,K21430 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016901,GO:0019842,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046872,GO:0048037,GO:0048038,GO:0055114,GO:0070968,GO:0097159,GO:1901363 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 353.0
DYD3_k127_5103875_1 reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 304.0
DYD3_k127_5103875_10 KTSC domain - - - 0.00000000000006944 83.0
DYD3_k127_5103875_11 membrane - - - 0.0000006001 55.0
DYD3_k127_5103875_2 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001139 253.0
DYD3_k127_5103875_3 Alkyl hydroperoxide reductase - - - 0.00000000000000000000000000000000000000000000000000000001231 203.0
DYD3_k127_5103875_4 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000003021 197.0
DYD3_k127_5103875_5 Conserved Protein - - - 0.00000000000000000000000000000000000000001238 161.0
DYD3_k127_5103875_6 Protein conserved in bacteria - - - 0.000000000000000000000000000009982 124.0
DYD3_k127_5103875_7 Cold shock K03704 - - 0.0000000000000000000000000001594 115.0
DYD3_k127_5103875_8 Cold-shock K03704 - - 0.000000000000000000000000001314 115.0
DYD3_k127_5103875_9 Cold shock protein domain K03704 - - 0.0000000000000000000000007349 106.0
DYD3_k127_5114727_0 - - - - 4.621e-281 880.0
DYD3_k127_5114727_1 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 5.774e-253 791.0
DYD3_k127_5114727_10 low-complexity proteins - - - 0.0000000000000000000000000000000000000000000000004989 182.0
DYD3_k127_5114727_11 PFAM flagellar FlaF family protein K06602 - - 0.0000000000000000000000000000000000001502 145.0
DYD3_k127_5114727_12 Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000000000000002109 143.0
DYD3_k127_5114727_13 - - - - 0.0000000000000000003607 101.0
DYD3_k127_5114727_14 PQ loop repeat K15383 - - 0.000000000000000007874 86.0
DYD3_k127_5114727_15 TIR domain - - - 0.00000000000000009722 95.0
DYD3_k127_5114727_16 Nucleotidyltransferase domain K07075 - - 0.0000000000309 68.0
DYD3_k127_5114727_17 FlaG protein K06603 - - 0.000000001566 64.0
DYD3_k127_5114727_18 Protein of unknown function DUF86 - - - 0.0004414 48.0
DYD3_k127_5114727_2 ERAP1-like C-terminal domain - - - 9.032e-202 660.0
DYD3_k127_5114727_3 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 582.0
DYD3_k127_5114727_4 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006633 389.0
DYD3_k127_5114727_5 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 322.0
DYD3_k127_5114727_6 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 313.0
DYD3_k127_5114727_7 Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 306.0
DYD3_k127_5114727_8 asparaginase K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 287.0
DYD3_k127_5114727_9 Flagellar protein FlbT K06601 - - 0.00000000000000000000000000000000000000000000000000000000004946 209.0
DYD3_k127_5128516_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 4.29e-201 649.0
DYD3_k127_5128516_1 PQQ enzyme repeat - - - 2.288e-197 652.0
DYD3_k127_5128516_10 Cytochrome b - - - 0.0000000000000000000000004215 110.0
DYD3_k127_5128516_11 - - - - 0.0000000000000004177 84.0
DYD3_k127_5128516_2 PQQ enzyme repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003583 619.0
DYD3_k127_5128516_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007472 382.0
DYD3_k127_5128516_4 the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 359.0
DYD3_k127_5128516_5 Glutathione S-transferase, C-terminal domain K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 310.0
DYD3_k127_5128516_6 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000005824 248.0
DYD3_k127_5128516_7 - - - - 0.0000000000000000000000000000000000000000000000007505 187.0
DYD3_k127_5128516_8 Dehydrogenase K17760 - 1.1.9.1 0.0000000000000000000000000000000000000009615 153.0
DYD3_k127_5128516_9 Belongs to the glycosyl hydrolase 43 family - - - 0.0000000000000000000000000000000005997 139.0
DYD3_k127_5142627_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 592.0
DYD3_k127_5142627_1 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000007033 230.0
DYD3_k127_5142627_2 Belongs to the peptidase S1B family - - - 0.00000000000000000000000000000000000000000000000001443 200.0
DYD3_k127_5142627_3 Trypsin-like serine protease - - - 0.000000000000000000000000000000000000000000004632 181.0
DYD3_k127_5142627_4 xylan catabolic process K03932 - - 0.0000000000000000000000000000000000000000000958 173.0
DYD3_k127_5142627_6 Protein of unknown function (DUF559) - - - 0.00000000000000000000000000000000002077 142.0
DYD3_k127_5142627_7 PFAM Sulphatase-modifying factor K20333 - - 0.0000000000000000000000000000000002801 150.0
DYD3_k127_5142627_8 ASCH - - - 0.000000000000000000000000000002059 123.0
DYD3_k127_5142627_9 - - - - 0.0002695 49.0
DYD3_k127_5144108_0 Dienelactone hydrolase family - - - 2.397e-207 658.0
DYD3_k127_5144108_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 519.0
DYD3_k127_5144108_2 amino acid K03294,K03759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 517.0
DYD3_k127_5144108_3 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 488.0
DYD3_k127_5158455_0 Divergent polysaccharide deacetylase K09798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 318.0
DYD3_k127_5158455_1 NUDIX domain K08311 - - 0.00000000000000000000000000000000000000000000000000002378 197.0
DYD3_k127_5158455_2 Protein of unknown function, DUF481 - - - 0.0000000000000000000000000000000000000000000005138 182.0
DYD3_k127_5158455_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000001112 152.0
DYD3_k127_5158455_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000123 120.0
DYD3_k127_5158455_5 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.000000000000000000008563 94.0
DYD3_k127_5158455_6 Bacterial PH domain - - - 0.0000000000004076 77.0
DYD3_k127_5176361_0 2-deoxycytidine 5-triphosphate deaminase K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 401.0
DYD3_k127_5176361_1 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 342.0
DYD3_k127_5176361_2 HWE histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 333.0
DYD3_k127_5176361_3 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003914 277.0
DYD3_k127_5176361_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001311 286.0
DYD3_k127_5176361_5 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000000102 172.0
DYD3_k127_5176361_6 Domain of unknown function (DUF4154) - - - 0.000000000000000000000000002957 117.0
DYD3_k127_5176361_7 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000003876 55.0
DYD3_k127_5209214_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 401.0
DYD3_k127_5209214_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 338.0
DYD3_k127_5209214_2 COG0500 SAM-dependent methyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008388 265.0
DYD3_k127_5209214_3 Cupin superfamily (DUF985) K09705 - - 0.00000000000000000000000000000000000000000000000004667 183.0
DYD3_k127_5209214_4 Dehydrogenase K00210,K00220,K04517 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019438,GO:0019752,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0047794,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.3.1.12,1.3.1.43 0.00000000000000000000000000000009203 142.0
DYD3_k127_5209214_5 Acetoacetyl-CoA reductase K00023 - 1.1.1.36 0.00000000000000000002038 90.0
DYD3_k127_5209214_6 Domain of unknown function (DUF4908) - - - 0.0000000000000000005426 96.0
DYD3_k127_52140_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.732e-272 846.0
DYD3_k127_52140_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00410,K00412 - - 1.074e-207 652.0
DYD3_k127_52140_10 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000001162 184.0
DYD3_k127_52140_11 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000000002821 179.0
DYD3_k127_52140_12 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000006296 138.0
DYD3_k127_52140_13 NYN domain - - - 0.00000000000000000000000000000000002665 151.0
DYD3_k127_52140_14 - - - - 0.000000000000000000000000000000004429 141.0
DYD3_k127_52140_15 Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000001649 131.0
DYD3_k127_52140_16 lactoylglutathione lyase activity - - - 0.0000000000000000000004776 100.0
DYD3_k127_52140_17 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.0000000000000001998 85.0
DYD3_k127_52140_19 Plasmid stability protein K21495 - - 0.000000000005319 68.0
DYD3_k127_52140_2 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009213 437.0
DYD3_k127_52140_20 - - - - 0.0000005163 55.0
DYD3_k127_52140_3 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 430.0
DYD3_k127_52140_4 EAL domain K13593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 350.0
DYD3_k127_52140_5 Glutathione-dependent formaldehyde-activating enzyme K03396 - 4.4.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007821 327.0
DYD3_k127_52140_6 cytochrome c1 K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 329.0
DYD3_k127_52140_7 Hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 288.0
DYD3_k127_52140_8 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000009697 258.0
DYD3_k127_52140_9 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000008675 215.0
DYD3_k127_5214590_0 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 473.0
DYD3_k127_5214590_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 331.0
DYD3_k127_5214590_2 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000231 265.0
DYD3_k127_5214590_3 ErfK YbiS YcfS YnhG family protein K16291 - - 0.000000000000000000000000000000000000000000000002934 187.0
DYD3_k127_5214590_4 Putative transposase of IS4/5 family (DUF4096) K07492 - - 0.000000000000000000001225 94.0
DYD3_k127_5222598_0 A circularly permuted ATPgrasp - - - 8.465e-206 651.0
DYD3_k127_5222598_1 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000001612 264.0
DYD3_k127_5222598_2 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007446 256.0
DYD3_k127_5222598_3 - - - - 0.0000000000000000001428 97.0
DYD3_k127_5229566_0 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000004413 190.0
DYD3_k127_5229566_1 transferase activity, transferring glycosyl groups - - - 0.0002156 53.0
DYD3_k127_5239991_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006245 481.0
DYD3_k127_5239991_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 296.0
DYD3_k127_5239991_10 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000001435 76.0
DYD3_k127_5239991_11 - - - - 0.0000003974 62.0
DYD3_k127_5239991_12 transcriptional regulator, SARP family - - - 0.0002771 51.0
DYD3_k127_5239991_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001321 275.0
DYD3_k127_5239991_3 Chemotaxis phosphatase, CheZ K03414 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001311 254.0
DYD3_k127_5239991_4 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.000000000000000000000000000000000000000000000000000000000000000007469 238.0
DYD3_k127_5239991_5 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000000000000002009 217.0
DYD3_k127_5239991_6 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000005491 170.0
DYD3_k127_5239991_7 PFAM MaoC domain protein dehydratase K17865 GO:0003674,GO:0003824,GO:0003859,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016043,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0022607,GO:0032787,GO:0042620,GO:0042621,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0046487,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901576 4.2.1.55 0.0000000000000000000000000000000000000006725 153.0
DYD3_k127_5239991_8 Protein of unknown function (DUF3035) - - - 0.00000000000000000000000000000000001345 150.0
DYD3_k127_5244369_1 Dehydrogenase K00101 - 1.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 554.0
DYD3_k127_5244369_11 Entericidin EcnA/B family - - - 0.0006973 45.0
DYD3_k127_5244369_2 Belongs to the UPF0276 family K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 340.0
DYD3_k127_5244369_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000007955 196.0
DYD3_k127_5244369_4 Cupin domain - - - 0.00000000000000000000000000000000000000000003025 172.0
DYD3_k127_5244369_5 Predicted integral membrane protein (DUF2282) - - - 0.00000000000000000000000000000001515 131.0
DYD3_k127_5244369_6 DoxX - - - 0.00000000000000000000000000005978 131.0
DYD3_k127_5244369_7 Putative DNA-binding domain - - - 0.00000000000000000000114 110.0
DYD3_k127_5244369_8 Zinc-finger domain - - - 0.00000000000000000001287 103.0
DYD3_k127_5244369_9 Protein of unknown function (DUF1109) - - - 0.0000000000000000001598 97.0
DYD3_k127_5246330_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 9.551e-319 994.0
DYD3_k127_5246330_1 Major Facilitator - - - 3.935e-258 806.0
DYD3_k127_5246330_10 peptidase K01284 - 3.4.15.5 0.00000000000000000000000000000000001655 136.0
DYD3_k127_5246330_11 FRG - - - 0.00000000000000000000000000001618 124.0
DYD3_k127_5246330_12 amidohydrolase - - - 0.0000000000000000000000002795 120.0
DYD3_k127_5246330_14 - - - - 0.00000000000000003432 93.0
DYD3_k127_5246330_15 - - - - 0.00000000000002739 81.0
DYD3_k127_5246330_16 - - - - 0.00000000001213 71.0
DYD3_k127_5246330_17 - - - - 0.00000000007262 69.0
DYD3_k127_5246330_19 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0002304 51.0
DYD3_k127_5246330_2 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 3.556e-218 697.0
DYD3_k127_5246330_20 - - - - 0.0003644 52.0
DYD3_k127_5246330_21 Caspase domain - - - 0.0004295 47.0
DYD3_k127_5246330_3 Multicopper oxidase K04753 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 502.0
DYD3_k127_5246330_4 COG0665 Glycine D-amino acid oxidases (deaminating) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 337.0
DYD3_k127_5246330_5 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 323.0
DYD3_k127_5246330_6 Bacterial extracellular solute-binding protein K02020 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015098,GO:0015103,GO:0015318,GO:0015399,GO:0015405,GO:0015412,GO:0015689,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030151,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0034220,GO:0042597,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043169,GO:0043225,GO:0043492,GO:0044464,GO:0046872,GO:0046914,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0099133,GO:1901359 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001557 278.0
DYD3_k127_5246330_7 Thioesterase - - - 0.000000000000000000000000000000000000000000000000000000006356 207.0
DYD3_k127_5246330_8 Thioredoxin-like - - - 0.0000000000000000000000000000000000004095 146.0
DYD3_k127_5246330_9 Protein of unknown function (DUF2721) - - - 0.000000000000000000000000000000000001189 143.0
DYD3_k127_5258135_0 AAA ATPase central domain protein K07478 - - 2.564e-208 659.0
DYD3_k127_5258135_1 nucleoside K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003597 433.0
DYD3_k127_5258135_2 non-haem dioxygenase in morphine synthesis N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009641 406.0
DYD3_k127_5258135_3 Belongs to the pseudouridine synthase RluA family K06179 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 351.0
DYD3_k127_5258135_4 Inosine-uridine preferring nucleoside hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006473 334.0
DYD3_k127_5258135_5 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 308.0
DYD3_k127_5258135_6 Chaperone required for the assembly of - - - 0.00000000000000000000000000000000000000000000000000000001777 214.0
DYD3_k127_5258135_7 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000388 153.0
DYD3_k127_5258135_8 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000000003396 152.0
DYD3_k127_5258135_9 cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000001666 146.0
DYD3_k127_5301605_0 Belongs to the helicase family. UvrD subfamily K16898 - 3.6.4.12 1.686e-283 910.0
DYD3_k127_5301605_1 COG3893 Inactivated superfamily I helicase K16899 - 3.6.4.12 3.252e-259 831.0
DYD3_k127_5301605_10 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 - 1.18.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002045 257.0
DYD3_k127_5301605_11 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000008221 181.0
DYD3_k127_5301605_12 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000511 188.0
DYD3_k127_5301605_13 ATPase or kinase K06925,K07102 - 2.7.1.221 0.000000000000000000000000000000000000000005705 161.0
DYD3_k127_5301605_14 PFAM secretion protein HlyD family protein K02005,K02022 - - 0.000000000000000000000000000000000008094 149.0
DYD3_k127_5301605_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 1.835e-213 673.0
DYD3_k127_5301605_3 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 488.0
DYD3_k127_5301605_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 407.0
DYD3_k127_5301605_5 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 412.0
DYD3_k127_5301605_6 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 385.0
DYD3_k127_5301605_7 Transcriptional regulator K03566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007239 323.0
DYD3_k127_5301605_8 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000238 285.0
DYD3_k127_5301605_9 Nucleotidyl transferase K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000638 274.0
DYD3_k127_5312677_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 6.059e-211 666.0
DYD3_k127_5312677_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 509.0
DYD3_k127_5312677_10 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000009154 165.0
DYD3_k127_5312677_11 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000002529 147.0
DYD3_k127_5312677_12 Squalene/phytoene synthase K02291,K18163 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000007297 144.0
DYD3_k127_5312677_13 Preprotein translocase subunit K03210 - - 0.0000000000000000000000000000000004646 134.0
DYD3_k127_5312677_14 - - - - 0.000000000000000001379 98.0
DYD3_k127_5312677_15 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000002098 96.0
DYD3_k127_5312677_17 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000143 64.0
DYD3_k127_5312677_2 Peptidase S9 prolyl oligopeptidase active site - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009998 447.0
DYD3_k127_5312677_3 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000805 299.0
DYD3_k127_5312677_4 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006816 305.0
DYD3_k127_5312677_5 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002201 290.0
DYD3_k127_5312677_6 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000002126 234.0
DYD3_k127_5312677_7 Urate oxidase N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000001227 228.0
DYD3_k127_5312677_8 Lysin motif K06194 - - 0.00000000000000000000000000000000000000000000000002183 200.0
DYD3_k127_5312677_9 Anion-transporting ATPase K03496 - - 0.000000000000000000000000000000000000000000000002242 188.0
DYD3_k127_5325289_0 Rod shape-determining protein MreB K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009314 590.0
DYD3_k127_5325289_1 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000006014 222.0
DYD3_k127_5325289_2 - - - - 0.00000000000000000000000000000000000000000009336 164.0
DYD3_k127_5350738_0 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008077 522.0
DYD3_k127_5350738_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family K00558 - 2.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 439.0
DYD3_k127_5350738_2 Serine aminopeptidase, S33 K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006733 417.0
DYD3_k127_5350738_3 COG0657 Esterase lipase K01066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003299 252.0
DYD3_k127_5350738_4 - - - - 0.00000000000000000000000000000000000000000000000000000001458 211.0
DYD3_k127_5350738_5 Transcriptional regulator, ModE family K02019 - - 0.000000000000000003222 91.0
DYD3_k127_5350738_6 SnoaL-like domain - - - 0.0000003145 58.0
DYD3_k127_539291_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 603.0
DYD3_k127_539291_1 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004683 511.0
DYD3_k127_539291_10 Heavy-metal resistance - - - 0.000000000000000000000003046 114.0
DYD3_k127_539291_11 Copper resistance protein D K07245,K14166 - - 0.000000000000005825 84.0
DYD3_k127_539291_12 CopC domain - - - 0.0000000000003632 80.0
DYD3_k127_539291_2 PFAM regulatory protein LysR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 349.0
DYD3_k127_539291_3 Osmc family - - - 0.000000000000000000000000000000000000000000000000000000002986 202.0
DYD3_k127_539291_4 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000004539 198.0
DYD3_k127_539291_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000002383 167.0
DYD3_k127_539291_6 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000004205 167.0
DYD3_k127_539291_7 Alpha beta hydrolase - - - 0.0000000000000000000000000000004559 134.0
DYD3_k127_539291_9 Predicted membrane protein (DUF2306) - - - 0.0000000000000000000000000002356 116.0
DYD3_k127_5439253_0 Protein of unknown function (DUF1587) - - - 2.492e-224 720.0
DYD3_k127_5439253_1 Amidohydrolase family K01487 - 3.5.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007649 523.0
DYD3_k127_5439253_2 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008138 478.0
DYD3_k127_5439253_4 Planctomycete cytochrome C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 324.0
DYD3_k127_5439253_5 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 322.0
DYD3_k127_5439253_6 NAD metabolism ATPase kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002782 267.0
DYD3_k127_5439253_7 Protein of unknown function (DUF3237) - - - 0.000000000000000000000000000000000000000000000000002202 188.0
DYD3_k127_546867_0 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003364 282.0
DYD3_k127_546867_1 Dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000051 237.0
DYD3_k127_546867_2 MgtC family K07507 - - 0.00000000000000000000000000000007213 134.0
DYD3_k127_546867_3 - - - - 0.00000000000000002687 93.0
DYD3_k127_547815_0 COG1138 Cytochrome c biogenesis factor K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 601.0
DYD3_k127_547815_1 Sulfatase K01130 - 3.1.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 489.0
DYD3_k127_547815_2 Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 413.0
DYD3_k127_547815_3 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 353.0
DYD3_k127_547815_4 Thiol disulfide interchange protein K02199 - - 0.0000000000000000000000000000000000000000000000000000000002702 214.0
DYD3_k127_547815_5 subunit of a heme lyase K02200 - - 0.000000000000000000000001901 106.0
DYD3_k127_5484437_0 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004879 370.0
DYD3_k127_5484437_1 Belongs to the thiolase family K00626,K02615 - 2.3.1.174,2.3.1.223,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001875 272.0
DYD3_k127_5484437_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000009803 67.0
DYD3_k127_5500596_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015627,GO:0015628,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:0098776,GO:1901265,GO:1901363,GO:1904680 - 0.0 1242.0
DYD3_k127_5500596_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 416.0
DYD3_k127_5500596_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000002139 247.0
DYD3_k127_5500596_3 Rieske-like [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007189 250.0
DYD3_k127_5500596_4 Peptidylprolyl isomerase K01802,K03769 - 5.2.1.8 0.00000000000000000000000009426 112.0
DYD3_k127_5500596_5 - - - - 0.000000000000003927 87.0
DYD3_k127_5500596_6 - - - - 0.00000000001233 78.0
DYD3_k127_5500596_7 - - - - 0.000001343 61.0
DYD3_k127_5515647_0 Belongs to the HpcH HpaI aldolase family K01644,K14451 - 3.1.2.30,4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000003576 258.0
DYD3_k127_5515647_1 Phosphomethylpyrimidine kinase K00868 - 2.7.1.35 0.00000000000000000000000000000000000000000000000000000000127 220.0
DYD3_k127_5515647_2 Phosphomethylpyrimidine kinase K00868 - 2.7.1.35 0.0000000000000000000000000000000000000000007914 168.0
DYD3_k127_553987_0 Dehydrogenase K00114 - 1.1.2.8 2.075e-206 657.0
DYD3_k127_553987_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007534 386.0
DYD3_k127_553987_2 PFAM Glucose Sorbosone dehydrogenase K00117,K21430 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016901,GO:0019842,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046872,GO:0048037,GO:0048038,GO:0055114,GO:0070968,GO:0097159,GO:1901363 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007502 386.0
DYD3_k127_553987_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006366 354.0
DYD3_k127_553987_4 MOSC domain - - - 0.0000000000000000000000000000000000000000006015 163.0
DYD3_k127_553987_5 Acetyltransferase (GNAT) family K03824 - - 0.0000000000000000000000001814 123.0
DYD3_k127_553987_6 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000001668 106.0
DYD3_k127_553987_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000006363 81.0
DYD3_k127_553987_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000003986 82.0
DYD3_k127_5556779_0 - - - - 0.0000917 51.0
DYD3_k127_5571564_0 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 460.0
DYD3_k127_5571564_1 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000962 414.0
DYD3_k127_5571564_2 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 322.0
DYD3_k127_5571564_3 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 319.0
DYD3_k127_5571564_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002997 259.0
DYD3_k127_5571564_5 synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000263 157.0
DYD3_k127_5571564_6 - - - - 0.00000000005674 72.0
DYD3_k127_55756_0 Domain of unknown function (DUF4332) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 399.0
DYD3_k127_55756_1 Domain of unknown function (DUF4010) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001632 291.0
DYD3_k127_55756_2 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003555 243.0
DYD3_k127_55756_3 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000005062 246.0
DYD3_k127_55756_4 protein containing LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000009362 230.0
DYD3_k127_55756_5 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000001566 203.0
DYD3_k127_55756_6 Calcineurin-like phosphoesterase K01090 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000248 194.0
DYD3_k127_55756_7 - - - - 0.0000000000000000000000001059 117.0
DYD3_k127_55756_8 Protein of unknown function (DUF805) - - - 0.0000000000000000000001906 106.0
DYD3_k127_55756_9 Domain of unknown function DUF302 - - - 0.0000007664 57.0
DYD3_k127_557785_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002433 262.0
DYD3_k127_557785_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006886 252.0
DYD3_k127_557785_2 transcriptional regulator, ArsR family - - - 0.0000000000000000000000000000000000000000000000003107 177.0
DYD3_k127_557785_3 protein conserved in bacteria - - - 0.0000000000000000000000000000000000004161 148.0
DYD3_k127_5668219_0 Glycosyl hydrolase family K01187 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.20 2.441e-194 619.0
DYD3_k127_5668219_1 Tannase and feruloyl esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 334.0
DYD3_k127_5668219_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009661 259.0
DYD3_k127_5668219_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005886 256.0
DYD3_k127_5668219_4 - - - - 0.00000000000000000000000000000000000000000000000000001642 204.0
DYD3_k127_5668219_5 - - - - 0.0000000000000000000000000000000000000003117 164.0
DYD3_k127_5668219_6 - - - - 0.000000000000000000000000000000000002933 142.0
DYD3_k127_5668219_7 - - - - 0.00000000000000000000003556 112.0
DYD3_k127_5668219_8 - - - - 0.000000000000000000002215 108.0
DYD3_k127_5675189_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 7.841e-256 805.0
DYD3_k127_5675189_1 Phosphoglucomutase K15778 - 5.4.2.2,5.4.2.8 2.061e-225 710.0
DYD3_k127_5675189_10 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008831 307.0
DYD3_k127_5675189_11 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016832,GO:0019637,GO:0044237,GO:0071704,GO:1901135 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 306.0
DYD3_k127_5675189_12 PFAM GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009442 319.0
DYD3_k127_5675189_13 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002548 262.0
DYD3_k127_5675189_14 maleylacetoacetate isomerase K01800,K01801 - 5.2.1.2,5.2.1.4 0.00000000000000000000000000000000000000000000000000000000000005804 222.0
DYD3_k127_5675189_15 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000003427 142.0
DYD3_k127_5675189_16 nuclear chromosome segregation - - - 0.0000000000000000000000000000009714 134.0
DYD3_k127_5675189_17 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000006037 117.0
DYD3_k127_5675189_18 transferase activity, transferring glycosyl groups - - - 0.0000000000000000004854 102.0
DYD3_k127_5675189_19 - - - - 0.000003925 57.0
DYD3_k127_5675189_2 Cys/Met metabolism PLP-dependent enzyme K01739,K01761 - 2.5.1.48,4.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006207 561.0
DYD3_k127_5675189_3 Phenylalanine-4-hydroxylase K00500 - 1.14.16.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 473.0
DYD3_k127_5675189_4 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000759 447.0
DYD3_k127_5675189_5 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 407.0
DYD3_k127_5675189_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 419.0
DYD3_k127_5675189_7 epimerase dehydratase K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 404.0
DYD3_k127_5675189_8 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009376 337.0
DYD3_k127_5675189_9 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 325.0
DYD3_k127_5678127_0 GTP-binding protein TypA K06207 GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840 - 2.706e-269 842.0
DYD3_k127_5678127_1 Citrate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 612.0
DYD3_k127_5678127_10 Protein of unknown function (DUF952) K12979 - - 0.00000000000000000000000003407 111.0
DYD3_k127_5678127_11 anaphase-promoting complex binding K03466,K06196,K12132 - 2.7.11.1 0.00007358 55.0
DYD3_k127_5678127_2 COG0534 Na -driven multidrug efflux pump K03327 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007102 504.0
DYD3_k127_5678127_3 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 368.0
DYD3_k127_5678127_4 S24 family peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007126 286.0
DYD3_k127_5678127_5 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000000000000000000000000001148 195.0
DYD3_k127_5678127_6 Putative member of DMT superfamily (DUF486) K09922 - - 0.0000000000000000000000000000000000000000000000002374 178.0
DYD3_k127_5678127_7 Flavin containing amine oxidoreductase K06955 - - 0.000000000000000000000000000000000000000000000001893 182.0
DYD3_k127_5678127_8 RF-1 domain - - - 0.0000000000000000000000000000000000001146 149.0
DYD3_k127_5678127_9 nuclease - - - 0.0000000000000000000000000001519 123.0
DYD3_k127_5687142_0 CBS transporter associated domain-containing protein K03699 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007818 529.0
DYD3_k127_5687142_1 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 347.0
DYD3_k127_5687142_2 Belongs to the 'phage' integrase family. XerC subfamily K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007525 323.0
DYD3_k127_5687142_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 338.0
DYD3_k127_5687142_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000173 286.0
DYD3_k127_5687142_5 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000000002489 216.0
DYD3_k127_5687142_6 Flavin containing amine oxidoreductase K06955 - - 0.000000000000000000000000000000000000001832 154.0
DYD3_k127_5687142_7 - - - - 0.00000000000000000000000000000004094 144.0
DYD3_k127_5687142_8 chemotaxis protein - - - 0.000000000000000000000000000001945 127.0
DYD3_k127_5687142_9 - - - - 0.0000000000000000000000005963 113.0
DYD3_k127_56936_0 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 296.0
DYD3_k127_56936_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031668,GO:0032991,GO:0032993,GO:0033554,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.0000000000000000000000000000000000000000000000002428 179.0
DYD3_k127_56936_2 Integrase core domain - - - 0.00000000000000000000000006475 107.0
DYD3_k127_5702361_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 2.739e-296 929.0
DYD3_k127_5702361_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 559.0
DYD3_k127_5702361_2 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001998 281.0
DYD3_k127_5702361_3 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009365 247.0
DYD3_k127_5702361_4 COG1226 Kef-type K transport systems K10716 - - 0.00000000000000000000000000000000000000000000000000000000003456 214.0
DYD3_k127_5702361_5 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0065003,GO:0070925,GO:0071826,GO:0071840 - 0.0000000000000000000000000000000000000000000000003107 177.0
DYD3_k127_5702361_6 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000001278 101.0
DYD3_k127_5702361_7 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000000000000008224 92.0
DYD3_k127_5721111_0 receptor - - - 1.522e-275 874.0
DYD3_k127_5721111_1 oxidase subunit K00425 - 1.10.3.14 1.698e-213 673.0
DYD3_k127_5721111_2 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 525.0
DYD3_k127_5721111_3 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009312 471.0
DYD3_k127_5721111_4 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 418.0
DYD3_k127_5721111_5 DnaJ C terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 395.0
DYD3_k127_5721111_6 MerR HTH family regulatory protein K18997 - - 0.00000000000000000001428 95.0
DYD3_k127_5721111_7 Transposase and inactivated K07492 - - 0.00002419 46.0
DYD3_k127_5734510_0 Dehydrogenase K17760,K21676 - 1.1.9.1,1.17.2.2 7.96e-249 785.0
DYD3_k127_5734510_1 ABC transporter related K15738 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 - 8.824e-237 760.0
DYD3_k127_5734510_10 Extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols K04101 - 1.13.11.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009705 436.0
DYD3_k127_5734510_11 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 406.0
DYD3_k127_5734510_12 Retinal pigment epithelial membrane protein K11159 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 407.0
DYD3_k127_5734510_13 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 369.0
DYD3_k127_5734510_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 363.0
DYD3_k127_5734510_15 COG0684 Demethylmenaquinone methyltransferase K10218 - 4.1.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003898 340.0
DYD3_k127_5734510_16 flavin reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000772 314.0
DYD3_k127_5734510_17 Domain of unknown function (DUF1932) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000655 283.0
DYD3_k127_5734510_18 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000004556 226.0
DYD3_k127_5734510_2 metal-dependent hydrolase of the TIM-barrel fold K03392,K10220 - 4.1.1.45,4.2.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 597.0
DYD3_k127_5734510_20 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.0000000000000000000000000000000000000000000000000000000002084 205.0
DYD3_k127_5734510_21 Protein of unknown function (DUF1194) - - - 0.000000000000000000000000000000000000000000000000000000528 204.0
DYD3_k127_5734510_22 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000005344 197.0
DYD3_k127_5734510_23 - - - - 0.0000000000000000000000000000000000000000000000002418 190.0
DYD3_k127_5734510_24 Pfam:DUF3380 - - - 0.0000000000000000000000000000000000000000007835 173.0
DYD3_k127_5734510_25 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000002751 147.0
DYD3_k127_5734510_26 Acetyltransferase (GNAT) domain K18816 - 2.3.1.82 0.0000000000000000000000005098 112.0
DYD3_k127_5734510_27 conserved protein, contains double-stranded beta-helix domain - - - 0.0000000000000000000002621 106.0
DYD3_k127_5734510_28 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.0000000000000000000022 99.0
DYD3_k127_5734510_29 - - - - 0.00000000000000001511 96.0
DYD3_k127_5734510_3 dehydrogenases and related proteins K10219 - 1.1.1.312 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000692 527.0
DYD3_k127_5734510_30 SnoaL-like domain - - - 0.0000000000000000526 89.0
DYD3_k127_5734510_31 - - - - 0.0000000000000001468 83.0
DYD3_k127_5734510_34 Negative regulator of - - - 0.0000003668 63.0
DYD3_k127_5734510_4 metal-dependent hydrolase of the TIM-barrel fold K10221 - 3.1.1.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 522.0
DYD3_k127_5734510_5 COG1760 L-serine deaminase K01752 - 4.3.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 517.0
DYD3_k127_5734510_6 protein conserved in bacteria K16514 GO:0003674,GO:0003824,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016853,GO:0016860,GO:0016863,GO:0017144,GO:0018918,GO:0018958,GO:0019336,GO:0019396,GO:0019439,GO:0019752,GO:0032787,GO:0042537,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 5.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 492.0
DYD3_k127_5734510_7 Nucleotidyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 479.0
DYD3_k127_5734510_8 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000626 463.0
DYD3_k127_5734510_9 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 446.0
DYD3_k127_5806060_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 3.307e-241 767.0
DYD3_k127_5806060_1 FAD binding domain K00481 GO:0000166,GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016705,GO:0016709,GO:0018659,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 1.14.13.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 539.0
DYD3_k127_5806060_10 - - - - 0.00000000000000000000000000000000000000000000001395 183.0
DYD3_k127_5806060_11 - - - - 0.0000000000000000000000000003858 119.0
DYD3_k127_5806060_12 - - - - 0.0000000000000000000000002247 111.0
DYD3_k127_5806060_13 - - - - 0.00000000000000000000000465 108.0
DYD3_k127_5806060_14 - - - - 0.00000000000000000000002668 109.0
DYD3_k127_5806060_15 - - - - 0.00000000000000000000003951 105.0
DYD3_k127_5806060_16 - - - - 0.000000000000000000001599 100.0
DYD3_k127_5806060_17 - - - - 0.000000000000000000003041 101.0
DYD3_k127_5806060_18 - - - - 0.00000000000000000004263 100.0
DYD3_k127_5806060_19 - - - - 0.000000000000000001167 99.0
DYD3_k127_5806060_2 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 433.0
DYD3_k127_5806060_20 - - - - 0.0000000000009422 74.0
DYD3_k127_5806060_21 - - - - 0.00000000002376 75.0
DYD3_k127_5806060_3 D-isomer specific 2-hydroxyacid dehydrogenase K00015,K00050,K00090 - 1.1.1.215,1.1.1.26,1.1.1.79,1.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 386.0
DYD3_k127_5806060_4 serine-type peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 373.0
DYD3_k127_5806060_5 acetylesterase activity K01046 - 3.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 336.0
DYD3_k127_5806060_6 COG4240 Predicted kinase K15918 - 2.7.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004496 296.0
DYD3_k127_5806060_7 helix_turn_helix, arabinose operon control protein K18954 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003648 273.0
DYD3_k127_5806060_8 Protein of unknown function (DUF3237) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002139 247.0
DYD3_k127_5806060_9 Protein of unknown function (DUF3237) - - - 0.0000000000000000000000000000000000000000000000000000000000001566 218.0
DYD3_k127_5823569_0 Amidohydrolase family K01485 - 3.5.4.1 5.989e-255 796.0
DYD3_k127_5823569_1 winged helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 592.0
DYD3_k127_5823569_2 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 499.0
DYD3_k127_5823569_3 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 - 2.1.3.3,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 394.0
DYD3_k127_5823569_4 Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 379.0
DYD3_k127_5823569_5 nucleotidase K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001207 284.0
DYD3_k127_5823569_6 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008830,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0045226,GO:0046379,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000586 229.0
DYD3_k127_5823569_7 Mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000001718 216.0
DYD3_k127_5823569_9 Bacterial transcriptional activator domain - - - 0.00003892 55.0
DYD3_k127_5848186_0 Dehydrogenase K17760 - 1.1.9.1 7.348e-233 743.0
DYD3_k127_5848186_1 Cobalamin-independent synthase, Catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 571.0
DYD3_k127_5848186_2 DNA methylase K13581 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 561.0
DYD3_k127_5848186_3 Alginate export - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007519 353.0
DYD3_k127_5849018_0 Sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000001001 200.0
DYD3_k127_5849018_1 - - - - 0.000000000000000000000000000000000000000000000000001813 189.0
DYD3_k127_5849018_2 OmpA-like transmembrane domain - - - 0.00000000000000000000000000000000000000001104 165.0
DYD3_k127_5849018_3 - - - - 0.00000000007084 72.0
DYD3_k127_5849018_4 Sodium hydrogen exchanger - - - 0.0000000715 55.0
DYD3_k127_5850940_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 2.307e-247 776.0
DYD3_k127_5850940_1 Aldehyde dehydrogenase family K00141 - 1.2.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 616.0
DYD3_k127_5850940_10 PilZ domain - - - 0.0000000008855 65.0
DYD3_k127_5850940_11 MAPEG family - - - 0.00000001982 61.0
DYD3_k127_5850940_2 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 567.0
DYD3_k127_5850940_3 Oxidoreductase molybdopterin binding domain K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 407.0
DYD3_k127_5850940_4 Ferric reductase like transmembrane component K17247 - - 0.00000000000000000000000000000000000000000000000000000000000559 221.0
DYD3_k127_5850940_5 penicillin-binding protein 1C K05367 - 2.4.1.129 0.000000000000000000000000000000000000009939 149.0
DYD3_k127_5850940_6 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000148 131.0
DYD3_k127_5850940_7 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000001502 132.0
DYD3_k127_5850940_8 - - - - 0.000000000000000000000000000002702 123.0
DYD3_k127_5850940_9 - - - - 0.00000000000000000001018 97.0
DYD3_k127_5858649_0 tRNA-splicing ligase RtcB K14415,K18148 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 601.0
DYD3_k127_5858649_1 Aminotransferase class-III K00822,K00833 - 2.6.1.18,2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 483.0
DYD3_k127_5858649_10 PFAM Phosphoglycerate mutase K08296 - - 0.000000000000000000000000002244 117.0
DYD3_k127_5858649_11 Domain of unknown function (DUF4112) - - - 0.000000000000000000000000005485 115.0
DYD3_k127_5858649_12 B-1 B cell differentiation - - - 0.000000000000000000000000874 118.0
DYD3_k127_5858649_13 homolog of Blt101 - - - 0.0000000000000000001435 93.0
DYD3_k127_5858649_14 WD40 repeat-like protein - - - 0.00000003222 65.0
DYD3_k127_5858649_2 C-terminal domain of 1-Cys peroxiredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 395.0
DYD3_k127_5858649_3 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 391.0
DYD3_k127_5858649_4 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009096 298.0
DYD3_k127_5858649_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000007704 218.0
DYD3_k127_5858649_6 Alcohol dehydrogenase GroES-like domain K00121 - 1.1.1.1,1.1.1.284 0.0000000000000000000000000000000000000000000000001852 194.0
DYD3_k127_5858649_7 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935,K02169 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197,6.3.3.3 0.0000000000000000000000000000000000000000009837 168.0
DYD3_k127_5858649_8 Dioxygenase - - - 0.000000000000000000000000000000000003093 147.0
DYD3_k127_5858649_9 TIR domain - - - 0.00000000000000000000000000000003813 140.0
DYD3_k127_5893757_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 571.0
DYD3_k127_5893757_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006407 483.0
DYD3_k127_5893757_2 FOG TPR repeat SEL1 subfamily K07126 - - 0.000000000000000000000000000004114 138.0
DYD3_k127_5918763_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004909 590.0
DYD3_k127_5918763_1 DNA topological change - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 546.0
DYD3_k127_5918763_10 helix_turn_helix multiple antibiotic resistance protein - - - 0.00002193 57.0
DYD3_k127_5918763_2 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 357.0
DYD3_k127_5918763_3 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004271 357.0
DYD3_k127_5918763_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 343.0
DYD3_k127_5918763_5 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000006473 268.0
DYD3_k127_5918763_6 Cyclic nucleotide-monophosphate binding domain K10914 - - 0.00000000000000000000000000000000000000000000001791 179.0
DYD3_k127_5918763_7 Ankyrin repeat - - - 0.0000000000000000000000000000000000000000000001053 188.0
DYD3_k127_5918763_8 Zn-dependent - - - 0.00000000000000000000000000001852 130.0
DYD3_k127_5937503_0 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 599.0
DYD3_k127_5937503_1 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 590.0
DYD3_k127_5937503_10 Polyhydroxyalkanoate synthesis repressor PhaR - - - 0.000000000000000000000000000000000000000000000000000000000000009594 223.0
DYD3_k127_5937503_11 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000004095 226.0
DYD3_k127_5937503_12 - - - - 0.0000000000000000000000000000000000000002776 156.0
DYD3_k127_5937503_13 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000002664 132.0
DYD3_k127_5937503_14 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000000000000000000000007006 115.0
DYD3_k127_5937503_15 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.000000000000000000007544 97.0
DYD3_k127_5937503_16 Ribonuclease B OB domain K03704 - - 0.0000000004885 66.0
DYD3_k127_5937503_18 - - - - 0.000000006103 63.0
DYD3_k127_5937503_2 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 395.0
DYD3_k127_5937503_20 - - - - 0.0005734 46.0
DYD3_k127_5937503_3 Acetoacetyl-CoA reductase K00023 - 1.1.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 377.0
DYD3_k127_5937503_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007916 392.0
DYD3_k127_5937503_5 Glycosyl transferase group 2 family protein K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 330.0
DYD3_k127_5937503_6 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 324.0
DYD3_k127_5937503_7 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000000000006231 244.0
DYD3_k127_5937503_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002133 230.0
DYD3_k127_5937503_9 NIPSNAP - - - 0.0000000000000000000000000000000000000000000000000000000000000006154 229.0
DYD3_k127_596118_0 Flavin containing amine oxidoreductase K09835,K10027,K10210 - 1.14.99.44,1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31,5.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 623.0
DYD3_k127_596118_1 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 440.0
DYD3_k127_596118_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 407.0
DYD3_k127_596118_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 304.0
DYD3_k127_596118_4 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000003219 214.0
DYD3_k127_596118_5 - - - - 0.0000000000000001567 81.0
DYD3_k127_596118_6 Acetyltransferase (GNAT) domain - - - 0.000007818 56.0
DYD3_k127_600726_0 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 7.15e-256 803.0
DYD3_k127_600726_1 KDPG and KHG aldolase K01625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007709 307.0
DYD3_k127_600726_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000008808 123.0
DYD3_k127_6020944_0 4Fe-4S dicluster domain K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 514.0
DYD3_k127_6020944_1 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.0000000006636 68.0
DYD3_k127_6024844_0 Function of homologous gene experimentally demonstrated in an other organism K03407 - 2.7.13.3 2.687e-267 853.0
DYD3_k127_6024844_1 COG1157 Flagellar biosynthesis type III secretory pathway ATPase K02412 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006471 576.0
DYD3_k127_6024844_10 Uncharacterized protein conserved in bacteria (DUF2218) K09956 - - 0.000000000000000001073 90.0
DYD3_k127_6024844_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K13584 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 433.0
DYD3_k127_6024844_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006622 355.0
DYD3_k127_6024844_4 COG1352 Methylase of chemotaxis methyl-accepting proteins K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 321.0
DYD3_k127_6024844_5 COG0642 Signal transduction histidine kinase K13588 - - 0.0000000000000000000000000000000000000000000000000000000000008141 217.0
DYD3_k127_6024844_6 Chemotaxis protein CheY K03413 - - 0.00000000000000000000000000000000000000000000000000000000007759 207.0
DYD3_k127_6024844_7 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000000000002547 178.0
DYD3_k127_6024844_8 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000002542 159.0
DYD3_k127_6024844_9 - - - - 0.00000000000000000000000000000000001027 140.0
DYD3_k127_6027516_0 COG2373 Large extracellular alpha-helical protein K06894 - - 0.0 1386.0
DYD3_k127_6027516_1 Beta-lactamase K18988 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007672 400.0
DYD3_k127_6027516_2 COG2373 Large extracellular alpha-helical protein K06894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 364.0
DYD3_k127_6027516_3 SnoaL-like domain - - - 0.0000008939 57.0
DYD3_k127_6065913_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 GO:0008150,GO:0008152,GO:0055114 1.6.1.2 7.026e-217 681.0
DYD3_k127_6065913_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000895 384.0
DYD3_k127_6065913_2 COG1668 ABC-type Na efflux pump, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 387.0
DYD3_k127_6065913_3 rpsU-divergently transcribed protein K18587 - - 0.00000000000000000000000000000000000000000000000000001181 197.0
DYD3_k127_6065913_4 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000007826 117.0
DYD3_k127_6065913_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000001709 119.0
DYD3_k127_6065913_6 Domain of unknown function (DUF4160) - - - 0.00000000000000000000002872 102.0
DYD3_k127_6065913_7 Protein of unknown function (DUF2442) - - - 0.0000000000000000000253 93.0
DYD3_k127_6065913_8 IclR helix-turn-helix domain - - - 0.0000002005 59.0
DYD3_k127_6065913_9 - - - - 0.000001674 59.0
DYD3_k127_6069714_0 Dehydrogenase K17760 - 1.1.9.1 2.709e-253 802.0
DYD3_k127_6069714_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 317.0
DYD3_k127_6069714_2 Major facilitator superfamily K08195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004131 307.0
DYD3_k127_6069714_3 O-methyltransferase K09846 - 2.1.1.210 0.0000000000000000000000000000000000000000000000000000000000000603 227.0
DYD3_k127_6069714_4 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000003272 214.0
DYD3_k127_6069714_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000001416 127.0
DYD3_k127_6075690_0 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 1.535e-198 630.0
DYD3_k127_6075690_1 general secretion pathway protein D K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 551.0
DYD3_k127_6075690_10 glycosyl transferase group 1 - - - 0.0001011 54.0
DYD3_k127_6075690_2 General secretion pathway protein K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000004472 252.0
DYD3_k127_6075690_3 Type II secretion system (T2SS), protein K K02460 - - 0.0000000000000000000000000000000000000000000000000000000001057 225.0
DYD3_k127_6075690_4 Type II secretion system (T2SS), protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000001971 203.0
DYD3_k127_6075690_5 Type II secretion system (T2SS), protein J K02459 - - 0.000000000000000000000000000001154 136.0
DYD3_k127_6075690_6 Type II secretion system (T2SS), protein L K02461 - - 0.00000000000000000008003 105.0
DYD3_k127_6075690_7 Type II secretory pathway component PulC K02452 - - 0.00000000000000005261 92.0
DYD3_k127_6075690_8 Type II secretory pathway, pseudopilin K02458 - - 0.00000000000001832 83.0
DYD3_k127_6075690_9 Type II transport protein GspH K02457 - - 0.00000000002954 75.0
DYD3_k127_6075887_1 PDDEXK-like domain of unknown function (DUF3799) K10906 - - 0.000001723 55.0
DYD3_k127_6092273_0 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 462.0
DYD3_k127_6092273_1 Zn-dependent protease, contains TPR repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000475 432.0
DYD3_k127_6092273_10 InterPro IPR007367 - - - 0.00000000000000000000003584 104.0
DYD3_k127_6092273_11 ThiS family - - - 0.00000000000000001518 83.0
DYD3_k127_6092273_12 Integrase core domain - - - 0.000003682 48.0
DYD3_k127_6092273_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 321.0
DYD3_k127_6092273_3 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000173 200.0
DYD3_k127_6092273_4 COG1651 Protein-disulfide isomerase - - - 0.000000000000000000000000000000000000000000005321 186.0
DYD3_k127_6092273_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000007454 169.0
DYD3_k127_6092273_6 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000008448 160.0
DYD3_k127_6092273_7 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 GO:0003674,GO:0003824,GO:0003989,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009305,GO:0009987,GO:0016049,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 - 0.00000000000000000000000000000000000002959 153.0
DYD3_k127_6092273_8 transcriptional regulator - - - 0.000000000000000000000000000000001385 136.0
DYD3_k127_6092273_9 - - - - 0.0000000000000000000000000009205 117.0
DYD3_k127_6106397_0 FtsX-like permease family K02004 - - 1.563e-246 785.0
DYD3_k127_6106397_1 Poly-beta-hydroxybutyrate polymerase N terminal K03821 - - 1.172e-197 636.0
DYD3_k127_6106397_10 - - - - 0.0002045 50.0
DYD3_k127_6106397_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 372.0
DYD3_k127_6106397_3 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 355.0
DYD3_k127_6106397_4 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 344.0
DYD3_k127_6106397_5 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007407 342.0
DYD3_k127_6106397_6 Belongs to the peptidase M50B family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 327.0
DYD3_k127_6106397_7 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000003512 164.0
DYD3_k127_6106397_8 Cytochrome c - - - 0.0000000000000000000000000000000111 134.0
DYD3_k127_6106397_9 Putative transposase of IS4/5 family (DUF4096) - - - 0.000000000007552 68.0
DYD3_k127_6106560_0 PFAM aldehyde oxidase and xanthine dehydrogenase a b hammerhead - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004716 490.0
DYD3_k127_6106560_1 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 467.0
DYD3_k127_6106560_2 [2Fe-2S] binding domain K07302,K18029 - 1.17.2.1,1.3.99.16 0.00000000000000000000000000000000000000000000000002154 184.0
DYD3_k127_6106560_3 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.0000000000000142 78.0
DYD3_k127_6106560_4 Putative transposase of IS4/5 family (DUF4096) - - - 0.000000000003215 68.0
DYD3_k127_617905_3 - - - - 0.00000000000000000000000000000000000000000000000004446 186.0
DYD3_k127_617905_4 - - - - 0.0000000000000000000000000000001227 130.0
DYD3_k127_617905_5 Transposase DDE domain - - - 0.0000001375 53.0
DYD3_k127_6180700_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006279 415.0
DYD3_k127_6180700_1 PFAM Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006229 391.0
DYD3_k127_6180700_2 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K01253,K08253 - 2.7.10.2,3.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 317.0
DYD3_k127_6180700_3 TIGRFAM RarD protein, DMT superfamily transporter K05786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001573 252.0
DYD3_k127_6180700_4 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000001297 223.0
DYD3_k127_6180700_5 enzyme involved in biosynthesis of extracellular polysaccharides - - - 0.000000000000000000000000000000002436 134.0
DYD3_k127_6184682_0 ParB domain protein nuclease K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 379.0
DYD3_k127_6184682_1 PFAM ParB domain protein nuclease K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 359.0
DYD3_k127_6199643_0 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 432.0
DYD3_k127_6199643_1 mechanosensitive ion channel K05802 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 315.0
DYD3_k127_6199643_2 Mg2 transporter protein, CorA family protein K16074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005477 254.0
DYD3_k127_6199643_3 - - - - 0.000000000000003032 87.0
DYD3_k127_6199643_4 - - - - 0.000000000002783 78.0
DYD3_k127_6199643_5 - - - - 0.0000000008783 70.0
DYD3_k127_6199643_6 - - - - 0.000000104 63.0
DYD3_k127_6209507_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 595.0
DYD3_k127_6209507_1 COG1520 FOG WD40-like repeat K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 443.0
DYD3_k127_6209507_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 407.0
DYD3_k127_6209507_3 GMC oxidoreductase K00108 - 1.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 318.0
DYD3_k127_6209507_4 Tetratricopeptide repeat-like domain - - - 0.000000000000000000000000000000001397 148.0
DYD3_k127_6231974_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 3.367e-210 668.0
DYD3_k127_6231974_1 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 556.0
DYD3_k127_6231974_2 urease accessory protein - - - 0.0000000000000000000000000000000000000000000000000000006652 211.0
DYD3_k127_6251982_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 2.29e-215 678.0
DYD3_k127_6251982_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006145 408.0
DYD3_k127_6251982_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 372.0
DYD3_k127_6251982_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000001579 255.0
DYD3_k127_6251982_4 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000138 258.0
DYD3_k127_6251982_5 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004551 243.0
DYD3_k127_6251982_6 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000005227 242.0
DYD3_k127_6251982_7 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000006505 232.0
DYD3_k127_6251982_8 Cupin domain - - - 0.000000000000000000000000000000000000000609 151.0
DYD3_k127_6251982_9 UPF0391 membrane protein - - - 0.00000000003746 66.0
DYD3_k127_6272041_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 3.904e-272 843.0
DYD3_k127_6272041_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088,K00364 GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205,1.7.1.7 8.09e-228 714.0
DYD3_k127_6272041_10 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000000004368 186.0
DYD3_k127_6272041_11 Toxic component of a toxin-antitoxin (TA) module. An RNase K07062 - - 0.0000000000000000000000000000000000000000000000008303 179.0
DYD3_k127_6272041_12 Belongs to the ArsC family K00537 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.20.4.1 0.000000000000000000000000000000000000000000000007566 184.0
DYD3_k127_6272041_13 PIN domain - - - 0.00000000000000000000000000000000001159 142.0
DYD3_k127_6272041_14 Acetyltransferase (GNAT) family K06977 - - 0.000000000000000000000000000000001003 135.0
DYD3_k127_6272041_15 PIN domain - - - 0.00000000000000000000000000000001309 131.0
DYD3_k127_6272041_16 Helix-turn-helix domain - - - 0.00000000000000000000000000000004322 129.0
DYD3_k127_6272041_17 Protein conserved in bacteria - - - 0.0000000000000000000000000000008066 128.0
DYD3_k127_6272041_18 YCII-related domain - - - 0.0000000000000000000000000008112 127.0
DYD3_k127_6272041_19 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000000000000000000008355 115.0
DYD3_k127_6272041_2 Pfam:HipA_N K07154 - 2.7.11.1 8.113e-203 639.0
DYD3_k127_6272041_20 YCII-related domain - - - 0.000000000000000000000005759 115.0
DYD3_k127_6272041_21 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000005958 94.0
DYD3_k127_6272041_22 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.00000000000000000004554 92.0
DYD3_k127_6272041_23 - - - - 0.000000000004648 76.0
DYD3_k127_6272041_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007322 520.0
DYD3_k127_6272041_4 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 422.0
DYD3_k127_6272041_5 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 377.0
DYD3_k127_6272041_6 PFAM PepSY-associated TM helix domain protein K00380 - 1.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 359.0
DYD3_k127_6272041_7 glucose sorbosone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 310.0
DYD3_k127_6272041_8 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006234 297.0
DYD3_k127_6272041_9 2'-5' RNA ligase superfamily K01975 - 3.1.4.58 0.0000000000000000000000000000000000000000000000000000000000003369 216.0
DYD3_k127_6283344_0 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.00000000000000000000000000000000000437 142.0
DYD3_k127_6283344_2 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0007768 49.0
DYD3_k127_6294665_0 CoA-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009038 589.0
DYD3_k127_6294665_1 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 524.0
DYD3_k127_6294665_2 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 500.0
DYD3_k127_6294665_3 AMP-binding enzyme C-terminal domain K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 488.0
DYD3_k127_6294665_4 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 462.0
DYD3_k127_6294665_5 Belongs to the enoyl-CoA hydratase isomerase family K07516 - 1.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008958 309.0
DYD3_k127_6294665_6 - - - - 0.000000000000000000000000000000000000000000000000000001353 194.0
DYD3_k127_6294665_7 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000001003 149.0
DYD3_k127_6294665_8 response to cobalt ion - - - 0.0000000000000000000006266 101.0
DYD3_k127_6294665_9 - - - - 0.0000000008368 65.0
DYD3_k127_6298106_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.332e-277 860.0
DYD3_k127_6298106_1 enolase 2 K01689 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 4.2.1.11 5.773e-200 630.0
DYD3_k127_6298106_10 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000004942 241.0
DYD3_k127_6298106_11 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000001005 187.0
DYD3_k127_6298106_12 Divergent polysaccharide deacetylase K09798 - - 0.00000000000000000000000000000000000000000000002732 182.0
DYD3_k127_6298106_13 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031668,GO:0032991,GO:0032993,GO:0033554,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.00000000000000000000000000000001255 130.0
DYD3_k127_6298106_14 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000004206 109.0
DYD3_k127_6298106_15 Preprotein translocase subunit SecG K03075 - - 0.000000000000000000004498 98.0
DYD3_k127_6298106_16 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000002376 66.0
DYD3_k127_6298106_17 - - - - 0.000000009479 62.0
DYD3_k127_6298106_18 outer membrane autotransporter barrel - - - 0.00001022 57.0
DYD3_k127_6298106_19 Septum formation initiator - - - 0.0005555 44.0
DYD3_k127_6298106_2 Anthranilate synthase component I K01657,K13503 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006275 568.0
DYD3_k127_6298106_3 Type I phosphodiesterase / nucleotide pyrophosphatase K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000746 389.0
DYD3_k127_6298106_4 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009766 347.0
DYD3_k127_6298106_5 Belongs to the TrpC family K01609 - 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 315.0
DYD3_k127_6298106_6 COG0512 Anthranilate para-aminobenzoate synthases component II K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 299.0
DYD3_k127_6298106_7 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001312 259.0
DYD3_k127_6298106_8 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000000000009868 240.0
DYD3_k127_6298106_9 Peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000001941 242.0
DYD3_k127_6391835_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 9.474e-277 863.0
DYD3_k127_6391835_1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 9.337e-217 679.0
DYD3_k127_6391835_2 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007426 578.0
DYD3_k127_6391835_3 localization factor protein PodJ K07126,K13582 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006733 449.0
DYD3_k127_6391835_4 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006926 361.0
DYD3_k127_6391835_5 Putative transmembrane protein (Alph_Pro_TM) - - - 0.00000000000000000000000000000000000000000000000000000000006657 225.0
DYD3_k127_6391835_6 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.000000000000000000000000000000000000000000000000000002653 201.0
DYD3_k127_6391835_7 Belongs to the GST superfamily K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000002848 197.0
DYD3_k127_6391835_8 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000003432 153.0
DYD3_k127_6391835_9 Protein of unknown function (DUF559) - - - 0.00000000000000000000000000000000004228 141.0
DYD3_k127_6404177_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 7.969e-305 948.0
DYD3_k127_6404177_1 glutamine synthetase K01915 - 6.3.1.2 5.817e-216 678.0
DYD3_k127_6404177_10 FeS assembly SUF system protein - - - 0.00000000000000000000000000000000000000000000000004599 183.0
DYD3_k127_6404177_11 Belongs to the HesB IscA family K13628 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009058,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0018130,GO:0019438,GO:0019538,GO:0022607,GO:0031163,GO:0031974,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0070013,GO:0071704,GO:0071840,GO:0097428,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000001385 184.0
DYD3_k127_6404177_12 regulator of competence-specific genes K07343 - - 0.0000000000000000000000000001048 124.0
DYD3_k127_6404177_2 Amidohydrolase family - - - 5.092e-206 651.0
DYD3_k127_6404177_3 Autotransporter beta-domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 619.0
DYD3_k127_6404177_4 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 546.0
DYD3_k127_6404177_5 Belongs to the DEAD box helicase family K03732,K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 520.0
DYD3_k127_6404177_6 overlaps another CDS with the same product name - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 318.0
DYD3_k127_6404177_7 COG2199 FOG GGDEF domain K07216,K13590 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000007005 271.0
DYD3_k127_6404177_8 Bacterial protein of unknown function (Gcw_chp) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005611 253.0
DYD3_k127_6404177_9 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000253 216.0
DYD3_k127_6413797_0 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 463.0
DYD3_k127_6413797_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006345 339.0
DYD3_k127_6413797_2 SMP-30/Gluconolaconase/LRE-like region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 322.0
DYD3_k127_6413797_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000577 273.0
DYD3_k127_6413797_4 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000004979 228.0
DYD3_k127_6413797_5 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000000000000000000003005 154.0
DYD3_k127_6416237_0 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second K01958 - 6.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005812 554.0
DYD3_k127_6416237_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000772 355.0
DYD3_k127_6416237_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 346.0
DYD3_k127_6416237_3 Spermidine synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 325.0
DYD3_k127_6416237_4 Domain of unknown function (DUF1993) K09983 - - 0.000000000000000000000000000000000000000000000000003204 187.0
DYD3_k127_6416237_5 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000006832 191.0
DYD3_k127_6416237_6 Putative methyltransferase - - - 0.000000000000000000000001984 113.0
DYD3_k127_644076_0 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 491.0
DYD3_k127_644076_1 ankyrin repeat K15503 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004845 407.0
DYD3_k127_644076_2 - - - - 0.000000000000000000000000000000000132 149.0
DYD3_k127_644076_3 - - - - 0.00000000000000000003747 104.0
DYD3_k127_6467524_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.019e-201 640.0
DYD3_k127_6467524_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 4.008e-195 621.0
DYD3_k127_6467524_2 GMC oxidoreductase K00108 - 1.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000006539 244.0
DYD3_k127_6467524_3 KR domain - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008150,GO:0008152,GO:0009056,GO:0016491,GO:0044464,GO:0055114,GO:0071704,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000004192 243.0
DYD3_k127_6467524_4 ABC-2 family transporter protein K20461 - - 0.0000000000000000000000000000000008663 141.0
DYD3_k127_6467524_5 PFAM Colicin V production protein K03558 - - 0.000000000000000000000002117 109.0
DYD3_k127_6508209_0 Dehydrogenase K00382 - 1.8.1.4 3.745e-235 734.0
DYD3_k127_6508209_1 - - - - 0.0000000000000000000000000000000000007057 147.0
DYD3_k127_6508209_3 SnoaL-like domain - - - 0.000000000004776 73.0
DYD3_k127_6508209_4 - - - - 0.0000002061 59.0
DYD3_k127_6515489_0 type IV secretion K20530 - - 0.0 1094.0
DYD3_k127_6515489_1 Type IV secretion-system coupling protein DNA-binding domain K20527 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003938 413.0
DYD3_k127_6515489_2 transfer protein trbL K07344 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 390.0
DYD3_k127_6515489_3 transfer protein trbJ K20266 - - 0.0000000000000000000000000000000000000000000002263 176.0
DYD3_k127_6515489_4 Type IV secretory pathway, VirB3-like protein K20529 - - 0.00000000000000000000000000000000000000000006766 169.0
DYD3_k127_6539309_0 Flagellar biosynthesis protein FlhA K02400 - - 5.257e-300 934.0
DYD3_k127_6539309_1 TonB dependent receptor K16087 - - 2.691e-235 749.0
DYD3_k127_6539309_10 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.00000008585 54.0
DYD3_k127_6539309_2 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 7.319e-200 632.0
DYD3_k127_6539309_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000434 331.0
DYD3_k127_6539309_4 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 287.0
DYD3_k127_6539309_5 Belongs to the bacterioferritin family K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000000000000004528 237.0
DYD3_k127_6539309_6 COG1419 Flagellar GTP-binding protein K02404 - - 0.000000000000000000000000000000000000000000000000000003132 204.0
DYD3_k127_6539309_7 - - - - 0.0000000000000000000000000000000000000000000001428 175.0
DYD3_k127_6539309_8 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 GO:0005575,GO:0005623,GO:0005886,GO:0009288,GO:0009425,GO:0016020,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000003071 157.0
DYD3_k127_6539309_9 bacterial-type flagellum organization K02411 - - 0.000000000000000003197 93.0
DYD3_k127_658686_0 PFAM luciferase family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008026 439.0
DYD3_k127_658686_1 ICC-like phosphoesterases K06953 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000263 280.0
DYD3_k127_658686_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000007413 244.0
DYD3_k127_658686_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000001291 171.0
DYD3_k127_658686_4 - - - - 0.000000000005467 76.0
DYD3_k127_661268_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 0.0 1017.0
DYD3_k127_661268_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 319.0
DYD3_k127_661268_2 Histidine triad (HIT) protein - - - 0.000000000000000000000000000000000001319 143.0
DYD3_k127_661268_3 Succinate dehydrogenase, cytochrome b556 subunit K00241 - - 0.0000000000000000000000000000000001252 138.0
DYD3_k127_661268_4 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit K00242 - - 0.0000000000000000000000000000007587 125.0
DYD3_k127_6615534_0 TonB dependent receptor K02014,K16089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 559.0
DYD3_k127_6615534_1 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003381 398.0
DYD3_k127_6615534_2 Domain of unknown function (DUF4974) K07165 - - 0.000000000000000000000000000000000000000000000000000000000000000002746 242.0
DYD3_k127_6615534_3 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.0000000000000000000000000000000000000000002789 165.0
DYD3_k127_6624751_0 COG1702 Phosphate starvation-inducible protein PhoH K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 355.0
DYD3_k127_6624751_1 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005529 250.0
DYD3_k127_6624751_2 PilZ domain - - - 0.00000000000000000000000000000000158 138.0
DYD3_k127_6624751_3 PAS domain - - - 0.000000000000000000001907 100.0
DYD3_k127_6631866_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 5.214e-247 784.0
DYD3_k127_6631866_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 637.0
DYD3_k127_6631866_2 Carboxylesterase family K03929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008154 597.0
DYD3_k127_6631866_3 Transcriptional regulator K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 336.0
DYD3_k127_6631866_4 Transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000582 289.0
DYD3_k127_6631866_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003572 274.0
DYD3_k127_6631866_6 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001082 267.0
DYD3_k127_6631866_7 ankyrin repeat K15503 - - 0.0000000000000000000000000000000000000000000000000000000000001198 235.0
DYD3_k127_6631866_8 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000002142 163.0
DYD3_k127_6631866_9 Secretin and TonB N terminus short domain - - - 0.0000179 55.0
DYD3_k127_6633756_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1174.0
DYD3_k127_6633756_1 Epoxide hydrolase N terminus - - - 5.518e-202 639.0
DYD3_k127_6633756_10 Carboxylesterase family K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007223 359.0
DYD3_k127_6633756_11 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 327.0
DYD3_k127_6633756_12 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 319.0
DYD3_k127_6633756_13 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 333.0
DYD3_k127_6633756_14 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 326.0
DYD3_k127_6633756_16 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005892 303.0
DYD3_k127_6633756_17 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009902 294.0
DYD3_k127_6633756_18 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002615 281.0
DYD3_k127_6633756_19 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001135 295.0
DYD3_k127_6633756_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005486 557.0
DYD3_k127_6633756_20 Oxidoreductase FAD-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001869 243.0
DYD3_k127_6633756_21 Protein of unknown function (DUF541) K09797 - - 0.0000000000000000000000000000000000000000000000000000000000000002292 229.0
DYD3_k127_6633756_22 PFAM Zn-finger in ubiquitin-hydrolases and other protein - - - 0.000000000000000000000000000000000000000000000000000000000002623 213.0
DYD3_k127_6633756_23 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000946 216.0
DYD3_k127_6633756_24 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.0000000000000000000000000000000000000000000000000000000005292 215.0
DYD3_k127_6633756_25 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.0000000000000000000000000000000000000004073 163.0
DYD3_k127_6633756_26 - - - - 0.0000000000000000000000000000000000000006238 160.0
DYD3_k127_6633756_27 Response regulator receiver - - - 0.000000000000000000000000000000000000000734 151.0
DYD3_k127_6633756_28 - K20326 - - 0.000000000000000000000000000000000000008402 158.0
DYD3_k127_6633756_29 Histidine kinase - - - 0.0000000000000000000000000000000000005269 162.0
DYD3_k127_6633756_3 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 512.0
DYD3_k127_6633756_30 transglycosylase - - - 0.00000000000000000000000000000000000195 148.0
DYD3_k127_6633756_31 - - - - 0.000000000000000000000000000000000009914 153.0
DYD3_k127_6633756_32 COG3474 Cytochrome c2 K08738 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009987,GO:0015979,GO:0016020,GO:0044237,GO:0044464,GO:0071944 - 0.0000000000000000000000000002138 120.0
DYD3_k127_6633756_33 Thioesterase-like superfamily - - - 0.00000000000000000000000001066 127.0
DYD3_k127_6633756_34 Resolvase - - - 0.0000007529 52.0
DYD3_k127_6633756_4 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 492.0
DYD3_k127_6633756_5 protein involved in outer membrane biogenesis K07289 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008584 477.0
DYD3_k127_6633756_6 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 385.0
DYD3_k127_6633756_7 cytochrome c biogenesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 372.0
DYD3_k127_6633756_8 Belongs to the peptidase S1B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 357.0
DYD3_k127_6633756_9 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 346.0
DYD3_k127_6642754_0 aspartate binding K11540 - 2.1.3.2,3.5.2.3,6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 520.0
DYD3_k127_6642754_1 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 489.0
DYD3_k127_6642754_2 Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 368.0
DYD3_k127_6642754_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 334.0
DYD3_k127_6642754_4 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000000001758 173.0
DYD3_k127_6642754_5 Domain of unknown function (DUF4142) - - - 0.0000000000000000000000558 111.0
DYD3_k127_6651930_0 Dehydrogenase K17760,K21676 - 1.1.9.1,1.17.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 497.0
DYD3_k127_6651930_1 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 443.0
DYD3_k127_6651930_5 gluconolactonase activity - - - 0.0000000000000000000000000000000000000001369 162.0
DYD3_k127_6651930_6 gluconolactonase activity - - - 0.00000000000000000000000000000000001075 152.0
DYD3_k127_6651930_7 SnoaL-like domain - - - 0.000000000000000006384 98.0
DYD3_k127_6654608_0 Nitrite and sulphite reductase 4Fe-4S domain K00381 - 1.8.1.2 2.303e-259 821.0
DYD3_k127_6654608_1 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 466.0
DYD3_k127_6654608_2 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005748 293.0
DYD3_k127_6654608_3 Transcriptional regulator K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000008324 241.0
DYD3_k127_6654608_4 Protein of unknown function (DUF2849) - - - 0.000000000000000000000000002799 119.0
DYD3_k127_6654608_5 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000037 73.0
DYD3_k127_6654608_6 Bacterial protein of unknown function (DUF934) - - - 0.0005772 49.0
DYD3_k127_6661005_0 AsmA family K07290 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008926 370.0
DYD3_k127_6661005_1 amidohydrolase K01459,K11206 - 3.5.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000933 332.0
DYD3_k127_6661005_10 UPF0391 membrane protein - - - 0.000002085 57.0
DYD3_k127_6661005_11 Flp pilus assembly protein, pilin Flp K02651 - - 0.000005534 57.0
DYD3_k127_6661005_12 COG0500 SAM-dependent methyltransferases - - - 0.00003463 54.0
DYD3_k127_6661005_2 Peptidylprolyl isomerase K01802,K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005373 273.0
DYD3_k127_6661005_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001121 276.0
DYD3_k127_6661005_4 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002895 244.0
DYD3_k127_6661005_6 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K03574 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000004522 208.0
DYD3_k127_6661005_7 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000008425 165.0
DYD3_k127_6661005_8 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0033218,GO:0042277,GO:0043167,GO:0043168,GO:0043295,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0055114,GO:0072341,GO:1900750,GO:1901681 - 0.000000000000000000000002605 119.0
DYD3_k127_6673934_0 COG3505 Type IV secretory pathway, VirD4 components K03205 - - 1.239e-278 871.0
DYD3_k127_6673934_1 Protein of unknown function (DUF3363) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 533.0
DYD3_k127_6673934_2 Carboxylesterase family K03929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006371 395.0
DYD3_k127_6673934_3 Protein of unknown function (DUF736) - - - 0.0000000000000000000000000000000000000000008471 162.0
DYD3_k127_6673934_4 Type IV secretory pathway, protease - - - 0.0000000000000000000000000000000000000008501 160.0
DYD3_k127_6673934_5 PFAM CopG domain protein DNA-binding domain protein - - - 0.00000000000000000000000152 106.0
DYD3_k127_6673934_6 DNA excision - - - 0.00000000000001282 81.0
DYD3_k127_6673934_7 Protein of unknown function (DUF2840) - - - 0.0000000000001225 79.0
DYD3_k127_6674745_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1151.0
DYD3_k127_6674745_1 Multicopper oxidase - - - 1.254e-243 768.0
DYD3_k127_6674745_10 Protein of unknown function, DUF - - - 0.000000000000000000000000000000000005617 150.0
DYD3_k127_6674745_11 Heavy-metal resistance - - - 0.000000000000000000000003633 110.0
DYD3_k127_6674745_12 Metal-sensitive transcriptional repressor K21600 - - 0.0000000000000000000001382 100.0
DYD3_k127_6674745_14 PepSY-associated TM region - - - 0.00000007189 63.0
DYD3_k127_6674745_16 CopC domain K07156 - - 0.000002364 55.0
DYD3_k127_6674745_17 Copper resistance protein D K07245,K14166 - - 0.000005885 57.0
DYD3_k127_6674745_2 von Willebrand factor, type A K07114 - - 1.132e-195 632.0
DYD3_k127_6674745_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 458.0
DYD3_k127_6674745_4 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 391.0
DYD3_k127_6674745_5 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 327.0
DYD3_k127_6674745_6 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001272 286.0
DYD3_k127_6674745_7 protein involved in copper resistance K07233 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000108 276.0
DYD3_k127_6674745_8 conserved secreted or membrane protein precursor - - - 0.000000000000000000000000000000000000000004732 159.0
DYD3_k127_6674745_9 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000002867 157.0
DYD3_k127_6680660_0 Belongs to the ClpA ClpB family K03694 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - 0.0 1126.0
DYD3_k127_6680660_1 protein conserved in bacteria K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 496.0
DYD3_k127_6680660_2 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 405.0
DYD3_k127_6680660_3 endoribonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000006477 235.0
DYD3_k127_6680660_4 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000001851 234.0
DYD3_k127_6680660_5 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000000000003007 169.0
DYD3_k127_6680660_6 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.0000000000000000000000000000000000000000000003305 180.0
DYD3_k127_6680660_7 methyltransferase - - - 0.00000000000000000000000000000000000727 149.0
DYD3_k127_6694125_0 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009031 503.0
DYD3_k127_6694125_1 Transporter associated domain K11105 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 372.0
DYD3_k127_6694125_2 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005826 355.0
DYD3_k127_6694125_3 glucose sorbosone K00117,K21430 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016901,GO:0019842,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046872,GO:0048037,GO:0048038,GO:0055114,GO:0070968,GO:0097159,GO:1901363 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 323.0
DYD3_k127_6694125_5 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.00000000000000000000000000000000005153 140.0
DYD3_k127_6694125_6 Transcriptional regulator - - - 0.000000000000000000000000074 117.0
DYD3_k127_6694125_7 PFAM Transglycosylase-associated protein - - - 0.000000000000000000000001393 110.0
DYD3_k127_6694125_8 - - - - 0.000000000000000000372 101.0
DYD3_k127_6700449_0 DNA helicase K03657 - 3.6.4.12 0.0 1109.0
DYD3_k127_6700449_1 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000003507 218.0
DYD3_k127_6700449_2 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. - - - 0.000000005811 67.0
DYD3_k127_6700449_3 Plasmid stabilization system K19092 - - 0.0000026 52.0
DYD3_k127_6700943_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 522.0
DYD3_k127_6700943_1 GTP cyclohydrolase K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073 304.0
DYD3_k127_6705469_0 Cyclic nucleotide-monophosphate binding domain K00384 - 1.8.1.9 5.649e-206 672.0
DYD3_k127_6705469_1 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 566.0
DYD3_k127_6705469_10 photosystem II stabilization - - - 0.00000000000000027 89.0
DYD3_k127_6705469_11 Bacterial protein of unknown function (DUF883) - - - 0.00002357 51.0
DYD3_k127_6705469_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 503.0
DYD3_k127_6705469_3 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 288.0
DYD3_k127_6705469_4 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000006345 251.0
DYD3_k127_6705469_5 PKHD-type hydroxylase K07336 - - 0.00000000000000000000000000000000000000000000000000001616 196.0
DYD3_k127_6705469_6 Thiol disulfide interchange protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000006704 175.0
DYD3_k127_6705469_7 DnaJ C terminal domain - - - 0.000000000000000000000000000000000000005654 155.0
DYD3_k127_6705469_8 AI-2E family transporter - - - 0.00000000000000000000000000000003196 129.0
DYD3_k127_6706989_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1e-323 1002.0
DYD3_k127_6706989_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 2.608e-288 905.0
DYD3_k127_6706989_10 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 366.0
DYD3_k127_6706989_11 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009528 355.0
DYD3_k127_6706989_12 HemY protein N-terminus K02498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 354.0
DYD3_k127_6706989_13 Domain of unknown function (DUF4010) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006619 363.0
DYD3_k127_6706989_14 Integral membrane protein TerC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 330.0
DYD3_k127_6706989_15 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 321.0
DYD3_k127_6706989_16 PFAM response regulator receiver K07663,K07664,K11329 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 311.0
DYD3_k127_6706989_17 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 299.0
DYD3_k127_6706989_18 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 285.0
DYD3_k127_6706989_19 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004352 263.0
DYD3_k127_6706989_2 COG3387 Glucoamylase and related glycosyl hydrolases - - - 7.988e-281 885.0
DYD3_k127_6706989_20 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000000001001 241.0
DYD3_k127_6706989_21 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000005791 236.0
DYD3_k127_6706989_22 - K12541 - - 0.00000000000000000000000000000000000000000000000000000000000001525 225.0
DYD3_k127_6706989_23 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000003859 237.0
DYD3_k127_6706989_24 O-methyltransferase K21460 - 2.1.1.304 0.00000000000000000000000000000000000000000000000000000002712 210.0
DYD3_k127_6706989_26 -acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000004626 190.0
DYD3_k127_6706989_27 - - - - 0.000000000000000000000000000000000000000000000229 186.0
DYD3_k127_6706989_28 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000002359 168.0
DYD3_k127_6706989_29 Radical SAM superfamily - - - 0.0000000000000000000000000000000000000007367 154.0
DYD3_k127_6706989_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.118e-277 857.0
DYD3_k127_6706989_30 Adenylate cyclase - - - 0.000000000000000000000000000000000000003907 166.0
DYD3_k127_6706989_31 COG1587 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.00000000000000000000000000000000000001376 153.0
DYD3_k127_6706989_32 Putative ATP-dependant zinc protease - - - 0.00000000000000000000000000000005966 132.0
DYD3_k127_6706989_33 Acetyltransferase (GNAT) domain - - - 0.000000000000000000004788 100.0
DYD3_k127_6706989_34 - - - - 0.0000000000000000009176 91.0
DYD3_k127_6706989_35 transferase activity, transferring acyl groups other than amino-acyl groups K01719 - 4.2.1.75 0.000000000005271 78.0
DYD3_k127_6706989_36 Ankyrin repeats (many copies) K06867 - - 0.00000001302 66.0
DYD3_k127_6706989_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.31e-257 799.0
DYD3_k127_6706989_5 COG0380 Trehalose-6-phosphate synthase K00697 - 2.4.1.15,2.4.1.347 2.647e-215 679.0
DYD3_k127_6706989_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 510.0
DYD3_k127_6706989_7 Cache domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 490.0
DYD3_k127_6706989_8 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360,GO:1901564 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 451.0
DYD3_k127_6706989_9 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006137 407.0
DYD3_k127_6707458_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 4.848e-239 747.0
DYD3_k127_6707458_1 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008239 384.0
DYD3_k127_6707458_2 protein localization to T-tubule K10380,K15502 - - 0.000000000000000000000000000000000005408 154.0
DYD3_k127_6707458_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000006851 143.0
DYD3_k127_6721010_0 DNA topological change K03168 - 5.99.1.2 6.063e-205 674.0
DYD3_k127_6721010_1 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 604.0
DYD3_k127_6721010_10 Cytochrome C' - - - 0.00000000000000000000000001226 115.0
DYD3_k127_6721010_11 Cytochrome C' - - - 0.000000000000000000000008472 108.0
DYD3_k127_6721010_12 O-methyltransferase K09846 - 2.1.1.210 0.000000000000003558 78.0
DYD3_k127_6721010_2 O-methyltransferase K09846 - 2.1.1.210 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 499.0
DYD3_k127_6721010_3 tRNA (Uracil-5-)-methyltransferase K00557,K03215 - 2.1.1.190,2.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 400.0
DYD3_k127_6721010_4 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004863 339.0
DYD3_k127_6721010_5 Planctomycete cytochrome C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006235 250.0
DYD3_k127_6721010_6 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000008516 199.0
DYD3_k127_6721010_7 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.00000000000000000000000000000000000000000000000002087 198.0
DYD3_k127_6721010_8 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000106 169.0
DYD3_k127_6721010_9 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000001934 159.0
DYD3_k127_6737456_0 COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain K06147,K06148,K12541 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 434.0
DYD3_k127_6737456_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009263 388.0
DYD3_k127_6737456_10 secretion protein K11003 - - 0.0000000000000000000000000000000000000000000000000000000000000000001858 249.0
DYD3_k127_6737456_11 Type III restriction enzyme res subunit - - - 0.000000000000000000000000000000000000000000000000000000000002731 231.0
DYD3_k127_6737456_12 GntR family transcriptional regulator K07979 - - 0.00000000000000000000000000000009488 128.0
DYD3_k127_6737456_13 Protein of unknown function (DUF3313) - - - 0.0000002316 60.0
DYD3_k127_6737456_14 Outer membrane protein beta-barrel domain - - - 0.0005505 50.0
DYD3_k127_6737456_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 331.0
DYD3_k127_6737456_3 COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain K12541 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007338 316.0
DYD3_k127_6737456_4 bacteriocin export ABC transporter, lactococcin 972 group K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 300.0
DYD3_k127_6737456_5 WYL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 295.0
DYD3_k127_6737456_6 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003542 311.0
DYD3_k127_6737456_7 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007117 272.0
DYD3_k127_6737456_8 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001254 271.0
DYD3_k127_6737456_9 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002246 272.0
DYD3_k127_6739834_0 Diguanylate cyclase K03320 - - 0.0 1202.0
DYD3_k127_6739834_1 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 1.174e-254 796.0
DYD3_k127_6739834_10 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000001603 200.0
DYD3_k127_6739834_11 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000008944 194.0
DYD3_k127_6739834_12 Belongs to the UPF0311 family - - - 0.00000000000000000000000000000000000000000000000005197 182.0
DYD3_k127_6739834_13 Methyltransferase small domain K15460 - 2.1.1.223 0.00000000000000000000000000000000000000000000000005856 190.0
DYD3_k127_6739834_14 Methyltransferase - - - 0.00000000000000000000000000000000000000000000009932 180.0
DYD3_k127_6739834_15 Glycosyl hydrolases family 16 - - - 0.000000000000000000000000000000000000007763 166.0
DYD3_k127_6739834_16 glycosyl transferase family K02851,K13007 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000001936 157.0
DYD3_k127_6739834_17 Pfam:Pyridox_oxidase - - - 0.000000000000000000000000001917 119.0
DYD3_k127_6739834_18 Putative prokaryotic signal transducing protein - - - 0.000000000000000001136 88.0
DYD3_k127_6739834_2 Histidine ammonia-lyase K01745,K10774 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006570,GO:0006572,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009063,GO:0009072,GO:0009074,GO:0009698,GO:0009699,GO:0009987,GO:0016043,GO:0016054,GO:0016829,GO:0016840,GO:0016841,GO:0019438,GO:0019439,GO:0019748,GO:0019752,GO:0022607,GO:0042802,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044550,GO:0046395,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0052883,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901605,GO:1901606 4.3.1.23,4.3.1.3 8.214e-238 747.0
DYD3_k127_6739834_3 COG0477 Permeases of the major facilitator superfamily K08225 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007554 443.0
DYD3_k127_6739834_4 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 426.0
DYD3_k127_6739834_5 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 415.0
DYD3_k127_6739834_6 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 375.0
DYD3_k127_6739834_8 Peptidase family S49 K04773,K04774 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000111 277.0
DYD3_k127_6739834_9 helix_turn_helix ASNC type K03719 - - 0.000000000000000000000000000000000000000000000000000000000676 205.0
DYD3_k127_6747160_0 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 518.0
DYD3_k127_6747160_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008265 492.0
DYD3_k127_6747160_10 Protein of unknown function (DUF2975) - - - 0.000000001473 67.0
DYD3_k127_6747160_11 - - - - 0.000000003705 65.0
DYD3_k127_6747160_12 OsmC-like protein - - - 0.000003302 53.0
DYD3_k127_6747160_13 tail specific protease - - - 0.0000568 55.0
DYD3_k127_6747160_2 Membrane dipeptidase (Peptidase family M19) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 397.0
DYD3_k127_6747160_3 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 386.0
DYD3_k127_6747160_4 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 356.0
DYD3_k127_6747160_5 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000029 192.0
DYD3_k127_6747160_6 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000000000000000000000576 188.0
DYD3_k127_6747160_7 Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.0000000000000000000000000000000000000000000166 166.0
DYD3_k127_6747160_8 Transcriptional regulator K07727 - - 0.000000000000000000000008057 103.0
DYD3_k127_6747160_9 Tetratricopeptide repeat - - - 0.000000000000001919 88.0
DYD3_k127_6756674_0 DNA ligase K01971 - 6.5.1.1 3.286e-240 758.0
DYD3_k127_6756674_1 Dehydrogenase K17760 - 1.1.9.1 2.456e-223 713.0
DYD3_k127_6756674_2 Receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 565.0
DYD3_k127_6756674_3 protein conserved in bacteria K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004348 309.0
DYD3_k127_6756674_4 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000009004 252.0
DYD3_k127_6756674_5 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000004222 228.0
DYD3_k127_6756674_6 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.00000000000000000000000000000000000000000000000000005718 192.0
DYD3_k127_6756674_7 - - - - 0.00000000000000000000000000000000000000000004971 165.0
DYD3_k127_6756674_8 Resolvase - - - 0.00001864 51.0
DYD3_k127_6757561_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 584.0
DYD3_k127_6757561_1 Cysteine-rich domain K00113 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 558.0
DYD3_k127_6757561_10 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000003965 266.0
DYD3_k127_6757561_11 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005252 251.0
DYD3_k127_6757561_12 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005406 273.0
DYD3_k127_6757561_13 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004371 248.0
DYD3_k127_6757561_14 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001823 245.0
DYD3_k127_6757561_15 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000007539 204.0
DYD3_k127_6757561_16 Putative bacterial sensory transduction regulator - - - 0.000000000000000000000000000000000000000000000000005605 186.0
DYD3_k127_6757561_17 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000004236 172.0
DYD3_k127_6757561_18 - - - - 0.0000000000000000000000000000000000000000002971 175.0
DYD3_k127_6757561_19 Sigma factor regulatory protein FecR PupR family K07165 - - 0.00000000000000000000000000000000000000005661 168.0
DYD3_k127_6757561_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 487.0
DYD3_k127_6757561_20 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000001783 141.0
DYD3_k127_6757561_21 transcriptional regulator - - - 0.00000000000000000000000000003256 126.0
DYD3_k127_6757561_22 Vibrio cholerae RfbT protein - - - 0.00000000000000000000000001482 117.0
DYD3_k127_6757561_23 PIN domain - - - 0.000000000000000000000000224 111.0
DYD3_k127_6757561_24 - - - - 0.0000000000000000000001998 107.0
DYD3_k127_6757561_25 Membrane fusogenic activity K09806 - - 0.0000000000000000001005 93.0
DYD3_k127_6757561_26 Cytochrome P460 - - - 0.0000000000000000006254 94.0
DYD3_k127_6757561_27 - - - - 0.0000000000000001848 93.0
DYD3_k127_6757561_28 Cytochrome P460 - - - 0.000000000000009534 83.0
DYD3_k127_6757561_29 - - - - 0.000000000004026 74.0
DYD3_k127_6757561_3 Protein involved in receptor activity and transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 490.0
DYD3_k127_6757561_30 - - - - 0.00000000001805 73.0
DYD3_k127_6757561_32 chaperone-mediated protein folding - - - 0.00000001381 57.0
DYD3_k127_6757561_4 Putative S-adenosyl-L-methionine-dependent methyltransferase K00574,K18164 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 422.0
DYD3_k127_6757561_5 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0015976,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036307,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 403.0
DYD3_k127_6757561_6 Fungal trichothecene efflux pump (TRI12) K07552 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 377.0
DYD3_k127_6757561_7 Fungal trichothecene efflux pump (TRI12) K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006075 365.0
DYD3_k127_6757561_8 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 302.0
DYD3_k127_6757561_9 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002037 286.0
DYD3_k127_6758205_0 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362 - 1.7.1.15 0.0 1224.0
DYD3_k127_6758205_1 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049,K15578 - - 1.01e-234 739.0
DYD3_k127_6758205_10 Alginate export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 354.0
DYD3_k127_6758205_11 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 292.0
DYD3_k127_6758205_12 Phosphorylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001265 261.0
DYD3_k127_6758205_13 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001811 254.0
DYD3_k127_6758205_14 MafB19-like deaminase K01485 - 3.5.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000003417 243.0
DYD3_k127_6758205_15 ANTAR K07183 - - 0.0000000000000000000000000000000000000000000000000000000000000000002137 236.0
DYD3_k127_6758205_16 phosphoribosyltransferase K07101 - - 0.00000000000000000000000000000000000000000000000000000000000000005033 227.0
DYD3_k127_6758205_17 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000000000000001889 222.0
DYD3_k127_6758205_18 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000008576 214.0
DYD3_k127_6758205_19 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000007966 209.0
DYD3_k127_6758205_2 NMT1-like family K15576 - - 1.753e-228 729.0
DYD3_k127_6758205_20 binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000000000000006685 203.0
DYD3_k127_6758205_21 phosphoribosyltransferase K07101 - - 0.0000000000000000000000000000000000000000000000001415 192.0
DYD3_k127_6758205_22 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000002566 151.0
DYD3_k127_6758205_23 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000001051 158.0
DYD3_k127_6758205_24 Nitrite reductase NAD(P)H , small subunit K00363 - 1.7.1.15 0.000000000000000000000000000000000181 144.0
DYD3_k127_6758205_25 - - - - 0.0000000000000000000000000000000005756 143.0
DYD3_k127_6758205_26 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000005807 81.0
DYD3_k127_6758205_3 Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations K01241 - 3.2.2.4 5.737e-200 638.0
DYD3_k127_6758205_4 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005713 613.0
DYD3_k127_6758205_5 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 553.0
DYD3_k127_6758205_6 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0061077,GO:0070011,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 536.0
DYD3_k127_6758205_7 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003812 435.0
DYD3_k127_6758205_8 Binding-protein-dependent transport system inner membrane component K02050,K15577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 416.0
DYD3_k127_6758205_9 NMT1-like family K22067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009687 395.0
DYD3_k127_678265_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 1.695e-321 989.0
DYD3_k127_678265_1 TonB dependent receptor K02014 - - 1.961e-269 850.0
DYD3_k127_678265_10 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.0000000000000000000000000000000000000000000000004142 184.0
DYD3_k127_678265_11 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0000000000000000000000000000000000000000000002187 174.0
DYD3_k127_678265_12 Urease beta subunit K01429 - 3.5.1.5 0.000000000000000000000000000000000000000000001911 167.0
DYD3_k127_678265_13 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000008129 160.0
DYD3_k127_678265_14 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000001153 160.0
DYD3_k127_678265_15 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.00000000000000000000000000000000355 135.0
DYD3_k127_678265_16 - - - - 0.00000000000000000000000000000001158 132.0
DYD3_k127_678265_2 DNA topological change K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007757 630.0
DYD3_k127_678265_3 acyl-CoA dehydrogenase K00252 - 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 578.0
DYD3_k127_678265_4 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K21053 - 3.5.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 495.0
DYD3_k127_678265_5 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 350.0
DYD3_k127_678265_6 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 350.0
DYD3_k127_678265_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007722 246.0
DYD3_k127_678265_8 response to abiotic stimulus K06867 - - 0.000000000000000000000000000000000000000000000000000000000183 225.0
DYD3_k127_678265_9 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000000000003189 190.0
DYD3_k127_6796021_0 ABC transporter transmembrane region K06147 - - 6.902e-224 709.0
DYD3_k127_6796021_1 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 388.0
DYD3_k127_6796021_10 AefR-like transcriptional repressor, C-terminal region - - - 0.000000000000000003658 93.0
DYD3_k127_6796021_11 Protein of unknown function (DUF465) - - - 0.00000000000000007427 81.0
DYD3_k127_6796021_12 Protein of unknown function (DUF2390) - - - 0.000000000000007177 83.0
DYD3_k127_6796021_13 Protein of unknown function (DUF465) - - - 0.0000007778 53.0
DYD3_k127_6796021_2 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 346.0
DYD3_k127_6796021_3 KR domain K00076 - 1.1.1.159 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 334.0
DYD3_k127_6796021_4 Small-conductance mechanosensitive channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 332.0
DYD3_k127_6796021_5 PFAM MscS Mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 300.0
DYD3_k127_6796021_6 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000423 263.0
DYD3_k127_6796021_7 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000005995 227.0
DYD3_k127_6796021_8 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000000000000000000000000000001681 185.0
DYD3_k127_6796021_9 Thioesterase K18700 - 3.1.2.29 0.0000000000000000000000000000000000000004439 156.0
DYD3_k127_6836293_0 ATP-grasp domain K09181 - - 2.902e-305 960.0
DYD3_k127_6836293_1 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 2.07e-225 726.0
DYD3_k127_6836293_2 Oxidoreductase K17218 - 1.8.5.4 3.644e-207 653.0
DYD3_k127_6836293_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009142 317.0
DYD3_k127_6836293_4 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000002405 160.0
DYD3_k127_6836293_5 Flavodoxin domain K00230 - 1.3.5.3 0.0000000000000000000000000000000000001427 148.0
DYD3_k127_6836293_6 - - - - 0.000000000000000000000000000000000006651 139.0
DYD3_k127_6836293_7 Protein of unknown function (DUF2892) - - - 0.00000000000000000000004889 104.0
DYD3_k127_6836293_8 Cytochrome c, class I - - - 0.0000000000000001152 85.0
DYD3_k127_6836293_9 Cytochrome c - - - 0.0000000000000005986 85.0
DYD3_k127_6870519_0 receptor K02014 - - 3.123e-276 872.0
DYD3_k127_6870519_1 Major Facilitator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 608.0
DYD3_k127_6870519_2 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 545.0
DYD3_k127_6870519_3 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006661 497.0
DYD3_k127_6870519_4 Retinal pigment epithelial membrane protein K11159 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 388.0
DYD3_k127_6870519_5 AraC-like ligand binding domain - - - 0.00000000000000000000000000000000000000000000000000000001206 214.0
DYD3_k127_6870519_6 translation initiation factor activity K06996 - - 0.0000000000000000000000000000000000003291 145.0
DYD3_k127_6873334_0 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 469.0
DYD3_k127_6873334_1 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 354.0
DYD3_k127_6873334_2 Biotin-lipoyl like K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008366 265.0
DYD3_k127_6873334_3 Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000001011 214.0
DYD3_k127_6873334_4 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000004869 214.0
DYD3_k127_689314_0 Exonuclease RecJ K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 592.0
DYD3_k127_689314_1 in Escherichia coli this protein forms a dimer and binds manganese K02446,K11532 - 3.1.3.11,3.1.3.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000047 280.0
DYD3_k127_6898147_0 Fic/DOC family - - - 1.466e-207 658.0
DYD3_k127_6898147_1 nucleotidyltransferase K07076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001261 281.0
DYD3_k127_6898147_2 HWE histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000119 193.0
DYD3_k127_6898147_3 - - - - 0.000000000000000000000000000000000000001331 166.0
DYD3_k127_6898147_4 Tetratricopeptide repeat - - - 0.000000000000001666 79.0
DYD3_k127_6898147_5 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000003012 85.0
DYD3_k127_6898147_7 Conserved repeat domain - - - 0.00000000006212 77.0
DYD3_k127_6903584_0 Methylmalonate-semialdehyde dehydrogenase acylating K00140 GO:0000062,GO:0000166,GO:0003674,GO:0003824,GO:0004491,GO:0005488,GO:0006082,GO:0006139,GO:0006206,GO:0006520,GO:0006573,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009081,GO:0009112,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0017076,GO:0018478,GO:0019752,GO:0019859,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033218,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0048037,GO:0050662,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901567,GO:1901605,GO:1901681 1.2.1.18,1.2.1.27 3.354e-250 784.0
DYD3_k127_6903584_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0030060,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 562.0
DYD3_k127_6903584_10 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000000005657 240.0
DYD3_k127_6903584_11 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.0000000000000000000000000000000000000000000000000000000000000375 231.0
DYD3_k127_6903584_12 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins K03790 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000791 210.0
DYD3_k127_6903584_13 Protein of unknown function (DUF3574) - - - 0.00000000000000000000000002241 116.0
DYD3_k127_6903584_14 Globin K05916 - 1.14.12.17 0.000000000000000000293 92.0
DYD3_k127_6903584_15 - - - - 0.00000000000003082 83.0
DYD3_k127_6903584_16 PIN domain K07065 - - 0.0000002235 59.0
DYD3_k127_6903584_17 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038,K21977 - 4.1.1.36,6.3.2.5 0.0003129 47.0
DYD3_k127_6903584_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 539.0
DYD3_k127_6903584_3 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008955 458.0
DYD3_k127_6903584_4 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases large terminal subunit K22325 - 1.14.15.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 381.0
DYD3_k127_6903584_5 feruloyl esterase activity K09252 GO:0000272,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010383,GO:0010393,GO:0010410,GO:0016052,GO:0016787,GO:0016788,GO:0016998,GO:0017144,GO:0030600,GO:0042737,GO:0042802,GO:0042803,GO:0043170,GO:0044036,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0045488,GO:0045490,GO:0045491,GO:0045493,GO:0046983,GO:0052689,GO:0071554,GO:0071704,GO:1901575 3.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 376.0
DYD3_k127_6903584_6 PFAM AFG1-family ATPase K06916 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 352.0
DYD3_k127_6903584_7 Acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 334.0
DYD3_k127_6903584_8 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 313.0
DYD3_k127_6903584_9 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009148 300.0
DYD3_k127_6906381_0 COG1472 Beta-glucosidase-related glycosidases K05349 - 3.2.1.21 9.139e-275 869.0
DYD3_k127_6906381_1 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000006072 223.0
DYD3_k127_6934809_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006179 452.0
DYD3_k127_6934809_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 377.0
DYD3_k127_6934809_2 Formyl transferase K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000005211 248.0
DYD3_k127_6934809_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000002069 227.0
DYD3_k127_6934809_4 Domain of unknown function (DUF1993) - - - 0.00000000000000000000000000000000000000000003848 170.0
DYD3_k127_6934809_5 Uncharacterized protein conserved in bacteria (DUF2066) - - - 0.00000000000000000000000000000000000001344 168.0
DYD3_k127_6934809_6 Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000000000000000000000000000000002053 132.0
DYD3_k127_6934809_7 - - - - 0.00000000000000000000000000003076 123.0
DYD3_k127_6967415_0 TonB dependent receptor K02014 - - 5.758e-277 876.0
DYD3_k127_6967415_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 383.0
DYD3_k127_6967415_2 Integrase core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 362.0
DYD3_k127_6967415_3 Protoglobin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007605 339.0
DYD3_k127_6967415_4 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002474 293.0
DYD3_k127_6967415_5 COG1573 Uracil-DNA glycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000005743 233.0
DYD3_k127_6974823_0 transporter K03761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 541.0
DYD3_k127_6974823_1 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 452.0
DYD3_k127_6974823_2 COG2089 Sialic acid synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 440.0
DYD3_k127_6974823_3 Polysaccharide biosynthesis protein K13013,K15894 - 4.2.1.115 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 420.0
DYD3_k127_6974823_4 Cytidylyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000306 222.0
DYD3_k127_6974823_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000006466 208.0
DYD3_k127_6974823_6 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000002655 86.0
DYD3_k127_6974823_7 Integrase core domain - - - 0.000003682 48.0
DYD3_k127_6981511_0 G8 - - - 1.511e-246 787.0
DYD3_k127_6981511_1 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 398.0
DYD3_k127_6981511_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003116 262.0
DYD3_k127_6981511_3 PFAM alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000001725 236.0
DYD3_k127_6981511_4 Bacterial regulatory protein, arsR family - - - 0.0000000000000000000000000000000000000000000000000000000000006689 215.0
DYD3_k127_6981511_5 NmrA-like family K07118 - - 0.000000000000000000000000000000000000000000000000000000002726 207.0
DYD3_k127_6981511_6 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000708 178.0
DYD3_k127_6981511_7 Domain of unknown function (DUF4166) - - - 0.0000000000000000000000000000009549 134.0
DYD3_k127_6981511_8 - - - - 0.00000000000000000000002959 106.0
DYD3_k127_7000668_0 COG2902 NAD-specific glutamate dehydrogenase K15371 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0008150,GO:0008152,GO:0016491,GO:0016638,GO:0016639,GO:0055114 1.4.1.2 0.0 1876.0
DYD3_k127_7000668_1 Arginosuccinate synthase K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 5.204e-222 695.0
DYD3_k127_7000668_10 epoxide hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 388.0
DYD3_k127_7000668_11 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 374.0
DYD3_k127_7000668_12 COG3118 Thioredoxin domain-containing protein K03671,K05838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 319.0
DYD3_k127_7000668_13 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 315.0
DYD3_k127_7000668_14 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003273 293.0
DYD3_k127_7000668_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008889 289.0
DYD3_k127_7000668_16 Prokaryotic glutathione synthetase, N-terminal domain K01920 GO:0003674,GO:0003824,GO:0004363,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0019184,GO:0034641,GO:0042398,GO:0043043,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044424,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901564,GO:1901566,GO:1901576 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005466 280.0
DYD3_k127_7000668_17 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000608 271.0
DYD3_k127_7000668_18 to the N-terminal domain of Lon protease K01338,K07157 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000004767 240.0
DYD3_k127_7000668_19 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000005479 243.0
DYD3_k127_7000668_2 transport system, periplasmic component K02035 - - 1.277e-213 675.0
DYD3_k127_7000668_20 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.000000000000000000000000000000000000000000000000000000000007594 219.0
DYD3_k127_7000668_21 - - - - 0.00000000000000000000000000000000000000000000000000000000001172 212.0
DYD3_k127_7000668_22 YbaK prolyl-tRNA synthetase K19055 - - 0.00000000000000000000000000000000000000000000000000000000009008 210.0
DYD3_k127_7000668_23 - - - - 0.000000000000000000000000000000000000000000000001123 190.0
DYD3_k127_7000668_24 alcohol dehydrogenase K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000001888 172.0
DYD3_k127_7000668_25 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000289 168.0
DYD3_k127_7000668_26 Protein of unknown function (DUF1232) - - - 0.00000000000000000000000000000000000000002266 156.0
DYD3_k127_7000668_27 Diacylglycerol kinase catalytic - - - 0.00000000000000000000000000000000000000007056 164.0
DYD3_k127_7000668_28 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000000004637 145.0
DYD3_k127_7000668_29 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000004179 143.0
DYD3_k127_7000668_3 Oligopeptidase F K08602 - - 1.368e-208 668.0
DYD3_k127_7000668_31 Activator of hsp90 atpase 1 family protein - - - 0.00000000000000000000000001243 116.0
DYD3_k127_7000668_32 Alg9-like mannosyltransferase family - - - 0.0000000000000000000000001209 113.0
DYD3_k127_7000668_33 - - - - 0.0000000000000000000000002999 115.0
DYD3_k127_7000668_34 Usg-like family - - - 0.000000000000000000000001258 115.0
DYD3_k127_7000668_35 Belongs to the UPF0434 family K09791 - - 0.000000000000000003234 97.0
DYD3_k127_7000668_37 SnoaL-like domain - - - 0.000000008747 64.0
DYD3_k127_7000668_38 - - - - 0.00000004596 63.0
DYD3_k127_7000668_39 Alg9-like mannosyltransferase family - - - 0.00000006764 59.0
DYD3_k127_7000668_4 - - - - 1.721e-203 673.0
DYD3_k127_7000668_41 SnoaL-like domain - - - 0.0000045 59.0
DYD3_k127_7000668_42 PFAM Transglycosylase associated protein - - - 0.0002385 49.0
DYD3_k127_7000668_5 Bacterial protein of unknown function (DUF853) K06915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 616.0
DYD3_k127_7000668_6 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007381 567.0
DYD3_k127_7000668_7 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009997 453.0
DYD3_k127_7000668_8 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 457.0
DYD3_k127_7000668_9 COG0729 Outer membrane protein K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 404.0
DYD3_k127_7027940_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 355.0
DYD3_k127_7027940_1 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 330.0
DYD3_k127_7027940_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000495 255.0
DYD3_k127_7027940_3 Protein of unknown function (DUF1134) - - - 0.0000000000000000000000000000000000000000000000000000000000002185 216.0
DYD3_k127_7027940_4 YMGG-like Gly-zipper - - - 0.0000000000000000000000000005277 119.0
DYD3_k127_7027940_5 - - - - 0.0000003193 56.0
DYD3_k127_7037011_0 endoribonuclease L-PSP - - - 0.00000000000000000000004964 102.0
DYD3_k127_7037011_1 Dehydroquinase class II K03786 - 4.2.1.10 0.000000000000000000003739 103.0
DYD3_k127_7037011_2 Belongs to the TPP enzyme family - - - 0.0000000000000003288 88.0
DYD3_k127_7061594_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 527.0
DYD3_k127_7061594_1 COG0768 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 487.0
DYD3_k127_7061594_10 Glycogen debranching enzyme N terminal - - - 0.000000002049 64.0
DYD3_k127_7061594_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01928,K01929,K15792 - 6.3.2.10,6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009442 426.0
DYD3_k127_7061594_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 362.0
DYD3_k127_7061594_4 Proteasome-type protease K07395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004369 302.0
DYD3_k127_7061594_5 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000003352 195.0
DYD3_k127_7061594_6 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000000001515 155.0
DYD3_k127_7061594_7 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000003465 127.0
DYD3_k127_7061594_8 secreted (periplasmic) protein - - - 0.0000000000000000004803 91.0
DYD3_k127_7061594_9 COG3666 Transposase and inactivated derivatives - - - 0.00000000000000718 76.0
DYD3_k127_7071393_0 acetylornithine aminotransferase K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005629 524.0
DYD3_k127_7071393_1 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 310.0
DYD3_k127_7071393_2 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001321 255.0
DYD3_k127_7071393_3 addiction module antidote protein - - - 0.00000000000000000000000000319 120.0
DYD3_k127_7095383_0 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 503.0
DYD3_k127_7095383_1 PFAM ABC transporter related K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001798 269.0
DYD3_k127_7095383_2 protein conserved in bacteria K09974 - - 0.0000000000000000000000000000000000000000000000000000000000000000003908 236.0
DYD3_k127_7095383_3 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000648 240.0
DYD3_k127_7095383_4 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000169 218.0
DYD3_k127_7095383_5 PQQ enzyme repeat - - - 0.00000000000000000000000000000000000000000000002557 178.0
DYD3_k127_7172015_0 Bacterial protein of unknown function (DUF839) K07093 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 479.0
DYD3_k127_7172015_1 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004809 383.0
DYD3_k127_7172015_10 YjbR - - - 0.0000000000000006805 82.0
DYD3_k127_7172015_11 Metallo-beta-lactamase superfamily - - - 0.00004273 55.0
DYD3_k127_7172015_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004281 263.0
DYD3_k127_7172015_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000137 238.0
DYD3_k127_7172015_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000004407 222.0
DYD3_k127_7172015_5 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000003383 186.0
DYD3_k127_7172015_6 Cytochrome C oxidase, cbb3-type, subunit III K18030 - 1.17.2.1 0.0000000000000000000000000000000000000000000000001608 187.0
DYD3_k127_7172015_7 COG0790 FOG TPR repeat, SEL1 subfamily - - - 0.000000000000000000000000000000000000001145 168.0
DYD3_k127_7172015_8 Uncharacterized protein conserved in bacteria (DUF2188) - - - 0.00000000000000000000282 98.0
DYD3_k127_7172015_9 - - - - 0.00000000000000000004458 102.0
DYD3_k127_7197589_0 Membrane - - - 3.677e-201 634.0
DYD3_k127_7197589_1 ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 536.0
DYD3_k127_7197589_10 Dimerisation domain K09846 - 2.1.1.210 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 308.0
DYD3_k127_7197589_11 Flavodoxin-like fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 310.0
DYD3_k127_7197589_12 Pfam:DUF2029 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009322 288.0
DYD3_k127_7197589_13 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000005149 236.0
DYD3_k127_7197589_14 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000002194 216.0
DYD3_k127_7197589_15 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000001465 214.0
DYD3_k127_7197589_16 Belongs to the P(II) protein family K04752 - - 0.0000000000000000000000000000000000000000000003734 169.0
DYD3_k127_7197589_17 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000003034 151.0
DYD3_k127_7197589_18 gag-polyprotein putative aspartyl protease K06985 - - 0.00000000000000000000000000001265 124.0
DYD3_k127_7197589_19 Transcriptional regulator - - - 0.00000000000002309 81.0
DYD3_k127_7197589_2 nucleoside transporter K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 478.0
DYD3_k127_7197589_20 Protein of unknown function (DUF2274) - - - 0.000000000002951 72.0
DYD3_k127_7197589_21 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000001091 74.0
DYD3_k127_7197589_22 conjugal transfer protein TrbL K07344 - - 0.0000000006251 62.0
DYD3_k127_7197589_3 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 471.0
DYD3_k127_7197589_4 Conjugal transfer protein trbI K20533 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 424.0
DYD3_k127_7197589_5 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 396.0
DYD3_k127_7197589_6 transfer protein TrbG K20532 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 375.0
DYD3_k127_7197589_7 Conjugal transfer protein TrbF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005457 327.0
DYD3_k127_7197589_8 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 338.0
DYD3_k127_7197589_9 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 323.0
DYD3_k127_725013_0 PFAM Amidase K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 496.0
DYD3_k127_725013_1 Helicase K03724 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 435.0
DYD3_k127_725013_2 - - - - 0.0000000000000000000000001792 114.0
DYD3_k127_781293_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K02182 - 6.2.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 511.0
DYD3_k127_781293_1 RNA polymerase sigma factor RpoH K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 466.0
DYD3_k127_781293_10 ParE toxin of type II toxin-antitoxin system, parDE K07746,K19092 - - 0.000000000000000000000000000004059 122.0
DYD3_k127_781293_11 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH K07746 - - 0.000000000000000000001069 97.0
DYD3_k127_781293_13 Protein of unknown function (DUF3772) K05802 - - 0.0005122 52.0
DYD3_k127_781293_2 PFAM L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007483 488.0
DYD3_k127_781293_3 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 402.0
DYD3_k127_781293_4 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 368.0
DYD3_k127_781293_5 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 367.0
DYD3_k127_781293_6 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 308.0
DYD3_k127_781293_7 metalloprotease K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006504 290.0
DYD3_k127_781293_9 DoxX-like family - - - 0.00000000000000000000000000000000000000000000000000000000003282 211.0
DYD3_k127_788917_0 SdiA-regulated - - - 0.00000000000000000000000000000000001141 145.0
DYD3_k127_788917_1 - - - - 0.00000000000000000000000000000003058 136.0
DYD3_k127_790854_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 2.895e-319 994.0
DYD3_k127_790854_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.3.5.3 0.00000000000000000000000000000000000000000000001542 172.0
DYD3_k127_790854_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000001287 110.0
DYD3_k127_860665_0 acyl-CoA dehydrogenase - - - 1.43e-205 668.0
DYD3_k127_860665_1 COG0277 FAD FMN-containing dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 551.0
DYD3_k127_860665_10 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000002357 154.0
DYD3_k127_860665_11 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000000000000000000000000000000000003856 144.0
DYD3_k127_860665_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 518.0
DYD3_k127_860665_3 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007425 475.0
DYD3_k127_860665_4 Enoyl-(Acyl carrier protein) reductase K13775 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 411.0
DYD3_k127_860665_5 Zn-dependent hydrolases including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 328.0
DYD3_k127_860665_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 314.0
DYD3_k127_860665_7 Belongs to the UPF0312 family K12262 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 309.0
DYD3_k127_860665_8 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000007388 259.0
DYD3_k127_860665_9 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000135 181.0
DYD3_k127_873464_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1285.0
DYD3_k127_873464_1 TIGRFAM L-lactate transport K03303 - - 3.669e-231 728.0
DYD3_k127_873464_10 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000001374 132.0
DYD3_k127_873464_11 Domain of unknown function (DUF4167) - - - 0.0000000000000000000003683 104.0
DYD3_k127_873464_12 Transposase - - - 0.0000000000004266 70.0
DYD3_k127_873464_13 lactoylglutathione lyase activity - - - 0.0000000000179 68.0
DYD3_k127_873464_14 Transposase DDE domain - - - 0.0000002007 55.0
DYD3_k127_873464_2 PQQ-like domain K00114,K17760,K22473 - 1.1.2.8,1.1.5.5,1.1.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004174 599.0
DYD3_k127_873464_3 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 493.0
DYD3_k127_873464_4 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 334.0
DYD3_k127_873464_5 TipAS antibiotic-recognition domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002518 280.0
DYD3_k127_873464_6 protein methyltransferase activity K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000002587 257.0
DYD3_k127_873464_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000005107 226.0
DYD3_k127_873464_8 Rrf2 family - - - 0.00000000000000000000000000000000000000000000000000002564 190.0
DYD3_k127_873464_9 - - - - 0.00000000000000000000000000000000000004198 154.0
DYD3_k127_878424_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1294.0
DYD3_k127_878424_1 L-aspartate oxidase K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 510.0
DYD3_k127_878424_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 294.0
DYD3_k127_878424_3 Cell Wall Hydrolase - - - 0.000000000000000000000000000000000000000000000000002634 194.0
DYD3_k127_878424_4 - - - - 0.0000000000000001683 87.0
DYD3_k127_907305_0 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005539 412.0
DYD3_k127_907305_1 ISXO2-like transposase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004636 381.0
DYD3_k127_907305_2 Alpha/beta hydrolase of unknown function (DUF900) - - - 0.00000000000000000000000000000000000000000000000000000000000000000006483 256.0
DYD3_k127_907305_5 Protein of unknown function (DUF2793) - - - 0.00000000000000000000000000000000001351 154.0
DYD3_k127_907305_6 Caspase domain - - - 0.0000000000000000001047 104.0
DYD3_k127_907519_0 Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA K00253 - 1.3.8.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 602.0
DYD3_k127_907519_1 Belongs to the dGTPase family. Type 2 subfamily K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253 527.0
DYD3_k127_907519_2 Belongs to the HesB IscA family K13628,K15724 - - 0.00000000000000000000000000000000000000009575 153.0
DYD3_k127_907519_3 PFAM PIN domain - - - 0.000000000000000000000000000003017 124.0
DYD3_k127_907519_4 Sporulation related domain - - - 0.000000000000002874 87.0
DYD3_k127_907519_5 Antidote-toxin recognition MazE, bacterial antitoxin - - - 0.00000000003963 70.0
DYD3_k127_919745_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.834e-253 794.0
DYD3_k127_919745_1 PQQ-like domain K00117 - 1.1.5.2 1.372e-198 644.0
DYD3_k127_919745_10 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004926 250.0
DYD3_k127_919745_11 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001285 241.0
DYD3_k127_919745_12 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.000000000000000000000000000000000000000000000000000000000000479 223.0
DYD3_k127_919745_13 COG1309 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000001184 202.0
DYD3_k127_919745_14 nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000006166 202.0
DYD3_k127_919745_15 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000004391 189.0
DYD3_k127_919745_16 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000001929 168.0
DYD3_k127_919745_17 alpha beta - - - 0.000000000000000000000000000000000000000006107 165.0
DYD3_k127_919745_18 Gcn5-related n-acetyltransferase - - - 0.0000000000000000000000000000000000001872 146.0
DYD3_k127_919745_19 Protein of unknown function (DUF3126) - - - 0.000000000000000000007153 94.0
DYD3_k127_919745_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 522.0
DYD3_k127_919745_20 helix_turn_helix, cAMP Regulatory protein - - - 0.000000000000000001426 95.0
DYD3_k127_919745_21 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000001569 91.0
DYD3_k127_919745_22 - - - - 0.00000000000000238 91.0
DYD3_k127_919745_24 - - - - 0.00001841 53.0
DYD3_k127_919745_25 Transposase and inactivated K07492 - - 0.00002419 46.0
DYD3_k127_919745_26 - - - - 0.00006673 56.0
DYD3_k127_919745_3 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 522.0
DYD3_k127_919745_4 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 348.0
DYD3_k127_919745_5 serine acetyltransferase K00640 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009058,GO:0009069,GO:0009070,GO:0009314,GO:0009333,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016053,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 345.0
DYD3_k127_919745_6 glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008467 294.0
DYD3_k127_919745_7 ABC transporter K05847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009223 279.0
DYD3_k127_919745_8 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000001292 266.0
DYD3_k127_919745_9 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000001597 244.0
DYD3_k127_921994_0 membrane protein involved in D-alanine export - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 419.0
DYD3_k127_921994_1 glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 375.0
DYD3_k127_921994_2 Glycosyltransferase family 87 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001537 250.0
DYD3_k127_921994_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000004848 231.0
DYD3_k127_921994_4 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000001323 203.0
DYD3_k127_921994_5 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000003358 130.0
DYD3_k127_921994_6 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000002477 113.0
DYD3_k127_95972_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 4.822e-233 728.0
DYD3_k127_95972_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000003415 233.0
DYD3_k127_95972_2 Ribbon-helix-helix domain - - - 0.00000000000002471 77.0
DYD3_k127_95972_3 DDE superfamily endonuclease - - - 0.00001857 47.0
DYD3_k127_95972_4 Domain of unknown function (DUF4169) - - - 0.00004 56.0
DYD3_k127_961664_0 Ribosomal protein S1 K02945 - - 2.154e-283 881.0
DYD3_k127_961664_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 308.0
DYD3_k127_961664_2 Cytidylate kinase K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000000000000000001857 207.0
DYD3_k127_961664_3 mechanosensitive ion channel activity K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.00000000000000000000000000000000000000000002187 165.0
DYD3_k127_961664_4 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009889,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2001141 - 0.0000000000000000000000000000000009087 134.0
DYD3_k127_965471_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002513 272.0
DYD3_k127_965471_1 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005027 263.0
DYD3_k127_965471_2 Tripartite tricarboxylate transporter TctA family - - - 0.000000000000000000000000000000000007631 139.0
DYD3_k127_965471_3 Thioesterase K18700 - 3.1.2.29 0.0000000000000004181 92.0
DYD3_k127_965471_4 transcriptional regulator K18301 - - 0.000000000008595 78.0
DYD3_k127_965471_5 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0002456 48.0
DYD3_k127_987507_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 495.0
DYD3_k127_987507_1 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 376.0
DYD3_k127_987507_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.00000000000000000000000000000000000000000000000000000000000000000000006481 256.0
DYD3_k127_999662_0 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 2.02e-237 745.0
DYD3_k127_999662_1 Dehydrogenase K17760 - 1.1.9.1 3.339e-218 704.0
DYD3_k127_999662_10 NADP transhydrogenase K00324 GO:0008150,GO:0008152,GO:0055114 1.6.1.2 0.000000000000000000000000000000000000000001306 158.0
DYD3_k127_999662_11 2OG-Fe(II) oxygenase superfamily - - - 0.000000000000000000000000000000000000000005964 163.0
DYD3_k127_999662_12 - - - - 0.000000000000000003138 95.0
DYD3_k127_999662_13 - - - - 0.00000000000000006903 85.0
DYD3_k127_999662_14 - - - - 0.0000000000000002512 91.0
DYD3_k127_999662_15 Bacterial aa3 type cytochrome c oxidase subunit IV - - - 0.0000000000000002615 82.0
DYD3_k127_999662_2 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 470.0
DYD3_k127_999662_3 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009487 500.0
DYD3_k127_999662_4 aldo keto reductase K05275 - 1.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 451.0
DYD3_k127_999662_5 NAD(P) transhydrogenase, alpha subunit K00324 GO:0000166,GO:0003674,GO:0003824,GO:0003957,GO:0005215,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0008746,GO:0008750,GO:0009117,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0016491,GO:0016651,GO:0016652,GO:0019362,GO:0019637,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0046983,GO:0048037,GO:0050662,GO:0051179,GO:0051186,GO:0051234,GO:0051287,GO:0055085,GO:0055086,GO:0055114,GO:0070403,GO:0070404,GO:0071704,GO:0072524,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 452.0
DYD3_k127_999662_6 O-methyltransferase K09846 - 2.1.1.210 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 420.0
DYD3_k127_999662_7 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 416.0
DYD3_k127_999662_8 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005285 292.0
DYD3_k127_999662_9 Domain of unknown function (DUF1932) - - - 0.000000000000000000000000000000000000000000000000000000000002304 218.0