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Overview

ID MAG00986
Name DYD3_bin.65
Sample SMP0027
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Alphaproteobacteria
Order Zavarziniales
Family Zavarziniaceae
Genus Zavarzinia
Species
Assembly information
Completeness (%) 76.57
Contamination (%) 0.22
GC content (%) 67.0
N50 (bp) 8,390
Genome size (bp) 4,179,977

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes4126

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_1004566_0 Caspase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 490.0
DYD3_k127_1004566_1 AAA domain (dynein-related subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003616 272.0
DYD3_k127_1025119_0 Histidine kinase K07649 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 535.0
DYD3_k127_1025119_1 Extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 468.0
DYD3_k127_1025119_2 Protein conserved in bacteria K07795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 422.0
DYD3_k127_1025119_3 Transcriptional regulatory protein, C terminal K07774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004766 327.0
DYD3_k127_1025119_4 Haemolysin-III related K11068 - - 0.0000000000000000000000000000000000000000000000000000000000001783 220.0
DYD3_k127_1025119_5 Putative Flp pilus-assembly TadE/G-like - - - 0.00002085 49.0
DYD3_k127_1045900_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 334.0
DYD3_k127_1045900_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000001257 115.0
DYD3_k127_1045900_2 transcriptional regulators containing the CopG Arc MetJ DNA-binding domain K07746 - - 0.000001483 52.0
DYD3_k127_1051377_0 ABC transporter substrate-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 519.0
DYD3_k127_1051377_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 471.0
DYD3_k127_1051377_2 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 401.0
DYD3_k127_1051377_3 Bacterial periplasmic substrate-binding proteins K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007349 370.0
DYD3_k127_1051377_4 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007853 348.0
DYD3_k127_1051377_5 PFAM Sulphur oxidation protein SoxZ K17226 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 331.0
DYD3_k127_1051377_6 COG0607 Rhodanese-related sulfurtransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000009615 232.0
DYD3_k127_1051377_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000001644 224.0
DYD3_k127_1051377_8 - - - - 0.000000000000000000000000000000000000000000000000000000005601 206.0
DYD3_k127_1051377_9 - - - - 0.0000000000000000000000000000000000000000001266 163.0
DYD3_k127_1059092_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 6.407e-199 630.0
DYD3_k127_1059092_1 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 459.0
DYD3_k127_1059092_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K00462 - 1.13.11.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006459 311.0
DYD3_k127_1059092_11 Anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000001353 278.0
DYD3_k127_1059092_12 hydratase' K02554 - 4.2.1.80 0.00000000000000000000000000000000000000000000000000000000000000000002921 242.0
DYD3_k127_1059092_13 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000006236 191.0
DYD3_k127_1059092_14 Ring hydroxylating beta subunit K14749 - - 0.000000000000000000000000000000000000000000004322 177.0
DYD3_k127_1059092_15 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000157 110.0
DYD3_k127_1059092_16 protein conserved in bacteria K09798 - - 0.000000001551 65.0
DYD3_k127_1059092_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 436.0
DYD3_k127_1059092_3 PFAM ring hydroxylating dioxygenase, alpha subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 415.0
DYD3_k127_1059092_4 Competence protein K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 423.0
DYD3_k127_1059092_5 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 413.0
DYD3_k127_1059092_6 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 371.0
DYD3_k127_1059092_7 Enoyl-(Acyl carrier protein) reductase K08690 - 1.3.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 348.0
DYD3_k127_1059092_8 Belongs to the TrpC family K01609,K13498 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48,5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 352.0
DYD3_k127_1059092_9 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009442 298.0
DYD3_k127_1071762_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 6.374e-239 743.0
DYD3_k127_1071762_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 410.0
DYD3_k127_1071762_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 404.0
DYD3_k127_1071762_3 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 317.0
DYD3_k127_1071762_4 Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000000000000006869 191.0
DYD3_k127_1085885_0 Exporters of the RND superfamily K07003 - - 5.522e-255 809.0
DYD3_k127_1085885_1 Transcriptional regulator - - - 0.000000000000000000000000000004578 128.0
DYD3_k127_1085885_2 DoxX K15977 - - 0.00000000000000000005586 97.0
DYD3_k127_1085885_3 Required for the activity of the bacterial periplasmic transport system of putrescine K11069 - - 0.00006615 51.0
DYD3_k127_1092007_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 2.652e-269 845.0
DYD3_k127_1092007_1 Binding-protein-dependent transport system inner membrane component K02001 - - 4.221e-198 637.0
DYD3_k127_1092007_10 Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000000000000000003688 117.0
DYD3_k127_1092007_12 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0009772 47.0
DYD3_k127_1092007_2 ATPases associated with a variety of cellular activities K02000 - 3.6.3.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 446.0
DYD3_k127_1092007_3 of ABC-type glycine betaine transport system K02002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009612 418.0
DYD3_k127_1092007_4 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008076 281.0
DYD3_k127_1092007_5 TIGRFAM RarD protein, DMT superfamily transporter K05786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003402 256.0
DYD3_k127_1092007_6 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000005311 231.0
DYD3_k127_1092007_7 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000002076 210.0
DYD3_k127_1092007_8 COG3637 Opacity protein and related surface antigens - - - 0.00000000000000000000000000000000000000000000000000000005203 208.0
DYD3_k127_1092007_9 Flavinator of succinate dehydrogenase K09159 - - 0.000000000000000000000000001378 114.0
DYD3_k127_1110629_0 Phosphopantetheine attachment site K02364 - 6.3.2.14 0.0 1287.0
DYD3_k127_1110629_1 Glycosyl transferases, related to UDP-glucuronosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 449.0
DYD3_k127_1110629_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.00000000000000000005722 96.0
DYD3_k127_1113627_0 Sulfatase - - - 3.404e-235 739.0
DYD3_k127_1113627_1 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006555 390.0
DYD3_k127_1113627_2 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006138 373.0
DYD3_k127_1113627_3 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007157 357.0
DYD3_k127_1113627_4 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001148 249.0
DYD3_k127_1113627_5 non-ribosomal peptide synthetase K02364 - 6.3.2.14 0.0000000000000000000000000000000000000000000000000000000000000000003457 239.0
DYD3_k127_1113627_6 4'-phosphopantetheinyl transferase superfamily K06133 - - 0.00000000000000000000000000000000005404 145.0
DYD3_k127_11269_0 Penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 621.0
DYD3_k127_11269_1 cation diffusion facilitator family transporter K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 415.0
DYD3_k127_11269_2 transport system, fused permease components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 377.0
DYD3_k127_11269_3 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000005016 196.0
DYD3_k127_11269_4 Domain of unknown function (DUF1850) - - - 0.0000000000000000000000000000000002714 139.0
DYD3_k127_11269_5 SnoaL-like domain - - - 0.000000000000000000000000000000005468 133.0
DYD3_k127_11269_6 Elongation factor - - - 0.00000000000000000001018 105.0
DYD3_k127_11269_8 cation diffusion facilitator family transporter K16264 - - 0.000000002177 59.0
DYD3_k127_1138009_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 458.0
DYD3_k127_1138009_1 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000524 332.0
DYD3_k127_1138009_2 Uncharacterised conserved protein (DUF2156) K07027,K14205 - 2.3.2.3 0.00000000000000000000000000000000000000000000000000000000000002566 226.0
DYD3_k127_1138009_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000003072 166.0
DYD3_k127_1147182_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 567.0
DYD3_k127_1147182_1 Phosphoribosyl transferase domain K00769 - 2.4.2.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005273 281.0
DYD3_k127_1147182_2 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000000000000000000000000000000000000112 210.0
DYD3_k127_1147182_3 Protein of unknown function (FYDLN_acid) - - - 0.00000000000002922 79.0
DYD3_k127_1147182_4 Cytidylate kinase K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.0000000000001144 84.0
DYD3_k127_1147182_5 Protein of unknown function (DUF1150) - - - 0.00000000001424 68.0
DYD3_k127_1161748_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006318 582.0
DYD3_k127_1161748_1 polysaccharide export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009776 414.0
DYD3_k127_1161748_2 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 305.0
DYD3_k127_1161748_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006426 284.0
DYD3_k127_1161748_4 Chain length determinant protein K10107 - - 0.0000000000000000000000000000000000000004674 164.0
DYD3_k127_1161748_5 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.00000000000000000000001598 115.0
DYD3_k127_1161748_6 Sulfotransferase family K19002 - 2.4.1.337 0.0000000000000836 81.0
DYD3_k127_1161748_7 Sulfotransferase family - - - 0.0000000000009581 78.0
DYD3_k127_1161748_8 Sulfotransferase family - - - 0.0000000002307 74.0
DYD3_k127_1165909_0 transport system, fused permease components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 566.0
DYD3_k127_1165909_1 transport system periplasmic component K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 411.0
DYD3_k127_1173034_0 MMPL family - - - 0.0 1073.0
DYD3_k127_1173034_1 Ring hydroxylating alpha subunit (catalytic domain) K10619 - 1.14.12.25 2.293e-211 662.0
DYD3_k127_1173034_10 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000006892 237.0
DYD3_k127_1173034_11 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000008417 183.0
DYD3_k127_1173034_12 Rieske-like [2Fe-2S] domain - - - 0.000000000000000000000000000000000002496 145.0
DYD3_k127_1173034_2 Protein of unknown function (DUF1329) - - - 6.062e-196 621.0
DYD3_k127_1173034_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K10621 - 1.13.11.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 437.0
DYD3_k127_1173034_4 Reductase C-terminal K00529 - 1.18.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 406.0
DYD3_k127_1173034_5 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 399.0
DYD3_k127_1173034_6 hydratase' K02554 - 4.2.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 384.0
DYD3_k127_1173034_7 KR domain K10620 - 1.3.1.58 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 347.0
DYD3_k127_1173034_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K10621 - 1.13.11.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 306.0
DYD3_k127_1173034_9 Ring hydroxylating beta subunit K16303 - 1.14.12.25 0.000000000000000000000000000000000000000000000000000000000000000000002643 239.0
DYD3_k127_1193326_0 Methionine synthase K00548 - 2.1.1.13 0.0 1278.0
DYD3_k127_1193326_1 COG0530 Ca2 Na antiporter K07301 - - 0.000000000000000000000000000000000000000000000000000000000000001786 221.0
DYD3_k127_1227673_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.535e-318 985.0
DYD3_k127_1227673_1 COG1960 Acyl-CoA dehydrogenases K20035 - - 4.695e-208 662.0
DYD3_k127_1227673_10 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008995 336.0
DYD3_k127_1227673_11 UDP-glucoronosyl and UDP-glucosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 321.0
DYD3_k127_1227673_12 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 - 1.1.1.69 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 304.0
DYD3_k127_1227673_13 Male sterility protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 293.0
DYD3_k127_1227673_14 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001998 281.0
DYD3_k127_1227673_15 enoyl-CoA hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001465 274.0
DYD3_k127_1227673_16 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003289 271.0
DYD3_k127_1227673_17 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005261 251.0
DYD3_k127_1227673_18 PFAM plasmid K19092 - - 0.00000000000000000000000000000000000000000000000005719 181.0
DYD3_k127_1227673_19 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000008771 182.0
DYD3_k127_1227673_2 glycolate oxidase subunit GlcD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 523.0
DYD3_k127_1227673_20 transcriptional regulator - - - 0.00000000000000000000000000000000000000004403 158.0
DYD3_k127_1227673_21 addiction module - - - 0.000000000000000000000000000000000003794 147.0
DYD3_k127_1227673_22 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000003703 124.0
DYD3_k127_1227673_23 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000000006899 98.0
DYD3_k127_1227673_24 alpha/beta hydrolase fold K07019 - - 0.000000000000000008964 86.0
DYD3_k127_1227673_3 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 524.0
DYD3_k127_1227673_4 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 428.0
DYD3_k127_1227673_5 Enoyl-(Acyl carrier protein) reductase K13775 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 411.0
DYD3_k127_1227673_6 Glutamine synthetase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 412.0
DYD3_k127_1227673_7 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008362 390.0
DYD3_k127_1227673_8 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 369.0
DYD3_k127_1227673_9 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 361.0
DYD3_k127_1229980_0 PFAM sigma-54 factor interaction domain-containing protein - - - 4.643e-282 878.0
DYD3_k127_1229980_1 NMT1-like family K15576 - - 1.319e-230 722.0
DYD3_k127_1229980_10 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007414 428.0
DYD3_k127_1229980_11 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 346.0
DYD3_k127_1229980_12 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 340.0
DYD3_k127_1229980_13 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000001083 250.0
DYD3_k127_1229980_14 Acyclic terpene utilisation family protein AtuA - - - 0.0000000000000000000000000000000000000000000000000000000000000000009871 235.0
DYD3_k127_1229980_15 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000008565 207.0
DYD3_k127_1229980_16 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000174 56.0
DYD3_k127_1229980_2 Fatty acid desaturase K00496 - 1.14.15.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 617.0
DYD3_k127_1229980_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038,K21977 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 549.0
DYD3_k127_1229980_4 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 501.0
DYD3_k127_1229980_5 Beta-lactamase K18372 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 505.0
DYD3_k127_1229980_6 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 505.0
DYD3_k127_1229980_7 ATPases associated with a variety of cellular activities K02049,K15578 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 438.0
DYD3_k127_1229980_8 TIGRFAM nitrate ABC transporter, inner membrane subunit K02050,K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 432.0
DYD3_k127_1229980_9 KR domain K13774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006169 414.0
DYD3_k127_1270901_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 446.0
DYD3_k127_1270901_1 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 308.0
DYD3_k127_1270901_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000004282 231.0
DYD3_k127_1270901_3 acetyltransferase K03824,K09964 - - 0.000000000000000000000000000000000000000000000000000000003464 205.0
DYD3_k127_1270901_4 - - - - 0.000000000000000000000000000000744 127.0
DYD3_k127_1282463_0 Amidase K01426 - 3.5.1.4 3.09e-309 973.0
DYD3_k127_1282463_1 Branched-chain amino acid transport system / permease component K01998,K11961 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 408.0
DYD3_k127_1282463_2 Branched-chain amino acid transport system / permease component K01997,K11960 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 396.0
DYD3_k127_1282463_3 ABC transporter K01995,K11962 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 344.0
DYD3_k127_1282463_4 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000005109 171.0
DYD3_k127_1288053_0 COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K04090 - 1.2.7.8 0.0 1267.0
DYD3_k127_1288053_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007549 409.0
DYD3_k127_1288053_10 Peptidase propeptide and YPEB domain - - - 0.00000000000000000169 88.0
DYD3_k127_1288053_11 EF-hand, calcium binding motif - - - 0.0001485 45.0
DYD3_k127_1288053_2 LysR substrate binding domain K03566 - - 0.000000000000000000000000000000000000000000000000000000000000000000001961 245.0
DYD3_k127_1288053_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000006758 220.0
DYD3_k127_1288053_4 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000000000002389 214.0
DYD3_k127_1288053_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000004141 202.0
DYD3_k127_1288053_6 endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000002822 169.0
DYD3_k127_1288053_7 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935,K02169 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197,6.3.3.3 0.0000000000000000000000000000000000000000003587 168.0
DYD3_k127_1288053_8 Histidine phosphatase superfamily (branch 1) - - - 0.0000000000000000000000000000000000000000006674 166.0
DYD3_k127_1288053_9 PFAM GcrA cell cycle regulator K13583 - - 0.0000000000000000000000000000000000000002691 158.0
DYD3_k127_1290334_0 Bacterial extracellular solute-binding protein K02055 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 512.0
DYD3_k127_1290334_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 498.0
DYD3_k127_1290334_2 Substrate binding domain of ABC-type glycine betaine transport system K05845 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 391.0
DYD3_k127_1290334_3 Fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009807 360.0
DYD3_k127_1290334_4 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000004333 239.0
DYD3_k127_129166_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K18687 - 6.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 462.0
DYD3_k127_129166_1 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 374.0
DYD3_k127_129166_2 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01040 - 2.8.3.12 0.0000000000000000000000000000000000000000002126 160.0
DYD3_k127_1301965_0 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 510.0
DYD3_k127_1301965_1 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 352.0
DYD3_k127_1301965_2 Tellurite resistance protein TerB K05801 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006186 272.0
DYD3_k127_1301965_3 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000000000003792 218.0
DYD3_k127_1301965_4 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000000000000000009555 170.0
DYD3_k127_1301965_5 COG0518 GMP synthase - Glutamine amidotransferase domain K01951 - 6.3.5.2 0.000000000000000000000000000000002701 131.0
DYD3_k127_1301965_6 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000000000000000000000000000002978 132.0
DYD3_k127_1301965_7 - - - - 0.0000000000000000000000000009785 116.0
DYD3_k127_1301965_8 SnoaL-like domain - - - 0.00000000000000000000006617 104.0
DYD3_k127_130289_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 426.0
DYD3_k127_130289_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 346.0
DYD3_k127_130289_2 Anthranilate synthase component I, N terminal region K01657,K01665 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000001533 123.0
DYD3_k127_1320778_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 515.0
DYD3_k127_1320778_1 ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 452.0
DYD3_k127_1320778_2 NADPH-quinone reductase (modulator of drug activity B) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 426.0
DYD3_k127_1320778_3 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 352.0
DYD3_k127_1320778_4 PFAM Cation efflux - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003073 272.0
DYD3_k127_1320778_5 HNH nucleases - - - 0.0000000000000000000000000000000000000003149 160.0
DYD3_k127_1320778_6 MAPEG family - - - 0.000000000000000000000000000000003274 137.0
DYD3_k127_1320778_7 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000002581 84.0
DYD3_k127_1320778_8 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.0000000000006888 81.0
DYD3_k127_1320778_9 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000003876 52.0
DYD3_k127_1321449_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 1.572e-294 915.0
DYD3_k127_1321449_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 7.055e-221 692.0
DYD3_k127_1321449_2 Bacterial extracellular solute-binding protein K17315 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006399 529.0
DYD3_k127_1321449_3 TRANSCRIPTIONal - - - 0.00000000000000000000000000000000000000000000000002661 183.0
DYD3_k127_1322261_0 Substrate binding domain of ABC-type glycine betaine transport system K02002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007289 407.0
DYD3_k127_1322261_1 Binding-protein-dependent transport system inner membrane component K02001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 406.0
DYD3_k127_1322261_2 Domain in cystathionine beta-synthase and other proteins. K02000 - 3.6.3.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005857 407.0
DYD3_k127_1323539_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1009.0
DYD3_k127_1323539_1 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00380 - 1.8.1.2 3.209e-259 827.0
DYD3_k127_1323539_2 Histidine kinase K02484 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 536.0
DYD3_k127_1323539_3 PFAM response regulator receiver K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000915 358.0
DYD3_k127_1323539_4 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 331.0
DYD3_k127_1323539_5 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001788 276.0
DYD3_k127_1323539_6 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005619 267.0
DYD3_k127_1323539_7 Tat pathway signal protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000003027 239.0
DYD3_k127_1323539_8 Peptidase propeptide and YPEB domain - - - 0.000000000000000000000000000000000000000000000008499 175.0
DYD3_k127_1323539_9 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000007985 166.0
DYD3_k127_1331688_0 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497,K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 364.0
DYD3_k127_1331688_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 299.0
DYD3_k127_1331688_2 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000001033 216.0
DYD3_k127_1331688_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000006622 126.0
DYD3_k127_1331688_4 - - - - 0.00000000000000000000006831 109.0
DYD3_k127_1331688_5 Histidine kinase - - - 0.00001578 52.0
DYD3_k127_1334141_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00410,K00412 - - 9.619e-204 643.0
DYD3_k127_1334141_1 Cytochrome C1 family K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000299 286.0
DYD3_k127_1334141_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000001539 263.0
DYD3_k127_1334141_3 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000001043 170.0
DYD3_k127_1334141_4 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000001869 131.0
DYD3_k127_1337641_0 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 333.0
DYD3_k127_1337641_1 ATPases associated with a variety of cellular activities K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000001919 236.0
DYD3_k127_1337641_2 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.00000000000000000000000000000000000000000000000001257 190.0
DYD3_k127_1351232_0 FeMo cofactor biosynthesis protein NifB K02585 - - 1.436e-257 801.0
DYD3_k127_1351232_1 GAF domain K02584 - - 1.806e-220 699.0
DYD3_k127_1351232_10 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000003657 118.0
DYD3_k127_1351232_11 NifT/FixU protein K02593 - - 0.00000000000000000000000000009591 118.0
DYD3_k127_1351232_2 Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP K02588 - 1.18.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 550.0
DYD3_k127_1351232_3 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 558.0
DYD3_k127_1351232_4 exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 372.0
DYD3_k127_1351232_5 SIR2-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 337.0
DYD3_k127_1351232_6 LRV protein FeS4 cluster - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002725 285.0
DYD3_k127_1351232_7 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000000000000000001201 182.0
DYD3_k127_1351232_8 NifZ domain K02597 - - 0.000000000000000000000000000000000000000006654 155.0
DYD3_k127_1351232_9 4Fe-4S binding domain - - - 0.00000000000000000000000000000009122 126.0
DYD3_k127_1375029_0 Hydantoinase B/oxoprolinase K01474,K10854 - 3.5.2.14,6.4.1.6 0.0 1390.0
DYD3_k127_1375029_1 N-methylhydantoinase A acetone carboxylase, beta subunit K01473,K10855 - 3.5.2.14,6.4.1.6 0.0 1274.0
DYD3_k127_1375029_2 NusA-like KH domain K02600 - - 1.848e-227 716.0
DYD3_k127_1375029_3 Acetone carboxylase gamma subunit K10856 - 6.4.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 308.0
DYD3_k127_1375029_4 GAF domain K21405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 297.0
DYD3_k127_1375029_5 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000008459 191.0
DYD3_k127_1375029_6 nucleic-acid-binding protein implicated in transcription termination K07742 - - 0.00000000000000000000000000000000000000000000008581 178.0
DYD3_k127_1375029_7 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.000000000000004324 80.0
DYD3_k127_1381871_0 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 2.498e-196 618.0
DYD3_k127_1381871_1 Biotin carboxylase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 322.0
DYD3_k127_1381871_2 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009447 300.0
DYD3_k127_1381871_3 YsiA-like protein, C-terminal region - - - 0.00000000000000000000000000000000000000000000000000009595 193.0
DYD3_k127_1381871_4 Acyltransferase - - - 0.00000000002985 66.0
DYD3_k127_1388044_0 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008793 597.0
DYD3_k127_1388044_1 TIGRFAM ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 385.0
DYD3_k127_1388044_2 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 371.0
DYD3_k127_1388044_3 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007019 327.0
DYD3_k127_1388044_4 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 312.0
DYD3_k127_1388044_5 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000007404 237.0
DYD3_k127_1388044_6 Cytochrome c, class I K08738 - - 0.00000000000000000000000000000004016 129.0
DYD3_k127_1388997_0 Exporters of the RND superfamily K07003 - - 6.84e-214 692.0
DYD3_k127_1388997_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005798 459.0
DYD3_k127_1388997_2 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000002184 191.0
DYD3_k127_1407107_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2168.0
DYD3_k127_1407107_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 355.0
DYD3_k127_1407107_2 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. K02601 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 286.0
DYD3_k127_1407107_3 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000009051 220.0
DYD3_k127_1407107_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000887 209.0
DYD3_k127_1407107_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000002096 187.0
DYD3_k127_1407107_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046,K13797 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000000000000000000000003577 144.0
DYD3_k127_1407107_7 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000001204 82.0
DYD3_k127_1408706_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.511e-214 676.0
DYD3_k127_1408706_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 575.0
DYD3_k127_1408706_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 476.0
DYD3_k127_1408706_3 Esterase PHB depolymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 402.0
DYD3_k127_1408706_4 Serine acetyltransferase, N-terminal K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 309.0
DYD3_k127_1408706_5 KR domain - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008150,GO:0008152,GO:0009056,GO:0016491,GO:0044464,GO:0055114,GO:0071704,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007103 293.0
DYD3_k127_1408706_6 PQQ-like domain K17713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003222 278.0
DYD3_k127_1408706_7 copG family - - - 0.0000000000000000000000000000000000000000000000000000000000002901 214.0
DYD3_k127_1408706_8 membrane protein, required for colicin V production K03558 - - 0.000000000000000000000000000000000002917 149.0
DYD3_k127_1446356_0 Pfam:Pyridox_oxidase K07006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 418.0
DYD3_k127_1446356_1 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000006271 243.0
DYD3_k127_1446356_2 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000006568 205.0
DYD3_k127_145118_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1129.0
DYD3_k127_145118_1 Aminotransferase K00812 - 2.6.1.1 1.252e-199 628.0
DYD3_k127_145118_2 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007702 454.0
DYD3_k127_145118_3 Ketopantoate reductase PanE/ApbA C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002017 257.0
DYD3_k127_145118_4 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000007186 166.0
DYD3_k127_1454464_0 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 464.0
DYD3_k127_1454464_1 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 361.0
DYD3_k127_145642_0 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000001714 268.0
DYD3_k127_145642_1 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.0000000000000000000000000000000000000000000000000002 187.0
DYD3_k127_145642_2 MlaD protein K02067,K06192 - - 0.000000000000000000000000000000000000000000000007313 183.0
DYD3_k127_145642_3 ABC-type transport auxiliary lipoprotein component K18480 - - 0.0000000000000000000000000000000000000000000002305 177.0
DYD3_k127_145642_4 nuclear chromosome segregation - - - 0.000000000000000000000000002811 127.0
DYD3_k127_1457152_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 407.0
DYD3_k127_1457152_1 3-beta hydroxysteroid dehydrogenase/isomerase family K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008495 377.0
DYD3_k127_1457152_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 359.0
DYD3_k127_1457152_3 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 364.0
DYD3_k127_1457152_4 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000659 224.0
DYD3_k127_1457152_5 alcohol dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000000000000000000000001075 172.0
DYD3_k127_1457152_6 Transcriptional regulator - - - 0.000000000000000000002614 108.0
DYD3_k127_1457152_7 Cytochrome P450 - - - 0.0000000000000000383 85.0
DYD3_k127_1457152_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00008318 53.0
DYD3_k127_1484521_0 MotA/TolQ/ExbB proton channel family K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009557 385.0
DYD3_k127_1484521_1 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000004327 244.0
DYD3_k127_149011_0 Cobalamin synthesis protein cobW C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 448.0
DYD3_k127_149011_1 ABC 3 transport family K02075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 399.0
DYD3_k127_149011_2 ATPases associated with a variety of cellular activities K02074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005331 337.0
DYD3_k127_149011_3 Belongs to the bacterial solute-binding protein 9 family K02077,K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 329.0
DYD3_k127_1502290_0 PFAM Tripartite tricarboxylate transporter TctA family K07793 - - 5.016e-256 796.0
DYD3_k127_1502290_1 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 452.0
DYD3_k127_1502290_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 454.0
DYD3_k127_1502290_3 PrpF protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 436.0
DYD3_k127_1502290_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009504 390.0
DYD3_k127_1502290_5 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001395 285.0
DYD3_k127_1502290_6 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000000000000000000000000000000000000389 214.0
DYD3_k127_1502290_7 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000003635 145.0
DYD3_k127_1507445_0 N-6 DNA Methylase K03427 - 2.1.1.72 6.82e-317 985.0
DYD3_k127_1507445_1 Type I restriction enzyme R protein N terminus (HSDR_N) K01153 - 3.1.21.3 8.738e-234 729.0
DYD3_k127_1507445_2 PFAM Filamentation induced by cAMP death on - - - 2.327e-198 627.0
DYD3_k127_1507445_3 Domain of unknown function (DUF4357) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 406.0
DYD3_k127_1507445_4 type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 351.0
DYD3_k127_1519259_0 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 404.0
DYD3_k127_1519259_1 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 329.0
DYD3_k127_1519259_2 Usg-like family - - - 0.00000000000000000000000000000002158 129.0
DYD3_k127_1519259_3 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000003758 132.0
DYD3_k127_1522833_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296 - - 0.0 1225.0
DYD3_k127_1522833_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K19595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008711 331.0
DYD3_k127_1522833_2 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.0000000000000000000000000000000000000000000000000000000008409 217.0
DYD3_k127_1522833_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000005368 164.0
DYD3_k127_1522833_4 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000000000000000000000000005827 136.0
DYD3_k127_1522833_5 - - - - 0.000000000000000000000000002349 113.0
DYD3_k127_1531832_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 494.0
DYD3_k127_1531832_1 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 428.0
DYD3_k127_1531832_10 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.0000000000000000000000000000002697 136.0
DYD3_k127_1531832_11 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000001236 87.0
DYD3_k127_1531832_12 Pfam:DUF1311 - - - 0.0000000001696 69.0
DYD3_k127_1531832_2 Carbon-nitrogen hydrolase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 342.0
DYD3_k127_1531832_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 331.0
DYD3_k127_1531832_4 Protein conserved in bacteria K09983 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003246 253.0
DYD3_k127_1531832_5 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001043 250.0
DYD3_k127_1531832_6 Protein of unknown function (DUF533) - - - 0.0000000000000000000000000000000000000000000000000000000000003392 218.0
DYD3_k127_1531832_7 pfam nudix K03574 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55 0.00000000000000000000000000000000000000000000000000000001326 205.0
DYD3_k127_1531832_8 TIGRFAM addiction module toxin, RelE StbE family - - - 0.0000000000000000000000000000000000000000008074 160.0
DYD3_k127_1531832_9 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0033218,GO:0042277,GO:0043167,GO:0043168,GO:0043295,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0055114,GO:0072341,GO:1900750,GO:1901681 - 0.00000000000000000000000000000000000202 139.0
DYD3_k127_1561306_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 479.0
DYD3_k127_1561306_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005815 383.0
DYD3_k127_1561306_2 Ubiquinol-cytochrome C chaperone K17662 - - 0.00000000000000000000000000000000007941 139.0
DYD3_k127_1561306_3 COG2913 Small protein A (tmRNA-binding) - - - 0.0000000000000000000000000000001089 130.0
DYD3_k127_1561306_4 Uncharacterized ACR, COG1399 - - - 0.0000000000000000000000000000004335 131.0
DYD3_k127_1561306_5 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000005328 123.0
DYD3_k127_1561306_6 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000001006 98.0
DYD3_k127_156412_0 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 454.0
DYD3_k127_156412_1 ABC transporter permease K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 421.0
DYD3_k127_156412_2 COG1177 ABC-type spermidine putrescine transport system, permease component II K11070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 346.0
DYD3_k127_156412_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 284.0
DYD3_k127_156412_4 homoserine kinase activity - - - 0.000000000000000000000001132 114.0
DYD3_k127_1572491_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 1.267e-258 804.0
DYD3_k127_1572491_1 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 1.272e-242 761.0
DYD3_k127_1572491_10 BetI-type transcriptional repressor, C-terminal - - - 0.00000000000000000000000000000002196 134.0
DYD3_k127_1572491_2 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 5.066e-225 705.0
DYD3_k127_1572491_3 Belongs to the TPP enzyme family K01577,K01652 - 2.2.1.6,4.1.1.8 9.235e-221 699.0
DYD3_k127_1572491_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 2.197e-194 614.0
DYD3_k127_1572491_5 Thiolase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 610.0
DYD3_k127_1572491_6 Alcohol dehydrogenase GroES-like domain K00055 - 1.1.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 554.0
DYD3_k127_1572491_7 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor K00004 GO:0000721,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006066,GO:0008150,GO:0008152,GO:0009058,GO:0016491,GO:0016614,GO:0016616,GO:0019751,GO:0034077,GO:0034079,GO:0034311,GO:0034312,GO:0042844,GO:0042845,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046165,GO:0046173,GO:0055114,GO:0071704,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653 1.1.1.303,1.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005544 481.0
DYD3_k127_1572491_8 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009273 432.0
DYD3_k127_1572491_9 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000004501 155.0
DYD3_k127_1579855_0 DEAD DEAH box helicase K03724 - - 4.156e-270 844.0
DYD3_k127_1579855_1 Calcineurin-like phosphoesterase K06953 - - 0.00000000000000000000006257 102.0
DYD3_k127_1589923_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1189.0
DYD3_k127_1589923_1 Phosphate transport regulator - - - 2.994e-230 732.0
DYD3_k127_1589923_2 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 2.757e-198 633.0
DYD3_k127_1593401_0 Dehydratase family K01690 - 4.2.1.12 0.0 1030.0
DYD3_k127_1593401_1 KDPG and KHG aldolase K01625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000001788 286.0
DYD3_k127_1593401_2 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K00851,K01057 - 2.7.1.12,3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000001844 239.0
DYD3_k127_161047_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1259.0
DYD3_k127_161047_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009975 346.0
DYD3_k127_1636820_0 Histidine kinase - - - 3.808e-224 712.0
DYD3_k127_1636820_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 563.0
DYD3_k127_1636820_2 Belongs to the long-chain O-acyltransferase family K00635 GO:0000302,GO:0001666,GO:0003674,GO:0003824,GO:0004144,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0009058,GO:0009628,GO:0009987,GO:0010035,GO:0016020,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0019432,GO:0030312,GO:0036293,GO:0040007,GO:0042221,GO:0042493,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044419,GO:0044464,GO:0045017,GO:0046460,GO:0046463,GO:0046486,GO:0047196,GO:0050896,GO:0051704,GO:0070482,GO:0071704,GO:0071731,GO:0071944,GO:0097366,GO:1901576,GO:1901698,GO:1901700 2.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 437.0
DYD3_k127_1636820_3 von Willebrand factor type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071 356.0
DYD3_k127_1636820_4 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009084 354.0
DYD3_k127_1636820_5 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007856 273.0
DYD3_k127_1636820_6 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000005232 209.0
DYD3_k127_1642444_0 Zn-dependent metallo-hydrolase RNA specificity domain K12574 - - 3.787e-202 645.0
DYD3_k127_1642444_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 474.0
DYD3_k127_1642444_2 - - - - 0.000000000000000000000000000001801 123.0
DYD3_k127_1642444_3 COG0340 Biotin-(acetyl-CoA carboxylase) ligase K03524 - 6.3.4.15 0.0000000000000000000000008327 107.0
DYD3_k127_1642444_4 Protein of unknown function (DUF1467) - - - 0.000000000000008505 77.0
DYD3_k127_1646689_0 Belongs to the ClpA ClpB family K03694 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - 0.0 1070.0
DYD3_k127_1646689_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.328e-206 649.0
DYD3_k127_1646689_10 enzyme of the cupin superfamily K06995 - - 0.000000000000000000000000000000000007569 158.0
DYD3_k127_1646689_11 Phasin protein - - - 0.00000000000000002236 89.0
DYD3_k127_1646689_2 phosphomannomutase K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 573.0
DYD3_k127_1646689_3 UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 409.0
DYD3_k127_1646689_4 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 372.0
DYD3_k127_1646689_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005602 298.0
DYD3_k127_1646689_6 Belongs to the peptidase S11 family K01286 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000003295 291.0
DYD3_k127_1646689_7 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000000000595 179.0
DYD3_k127_1646689_8 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000001054 154.0
DYD3_k127_1646689_9 - - - - 0.000000000000000000000000000000000000003728 156.0
DYD3_k127_1679916_0 COG2931 RTX toxins and related Ca2 -binding proteins K01406 - 3.4.24.40 7.644e-208 681.0
DYD3_k127_1679916_1 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009247 555.0
DYD3_k127_1679916_10 - - - - 0.0000471 53.0
DYD3_k127_1679916_2 TRAP transporter solute receptor TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 317.0
DYD3_k127_1679916_3 Esterase PHB depolymerase - - - 0.0000000000000000000000000000000000000000000000000000000000000003613 231.0
DYD3_k127_1679916_4 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000003999 205.0
DYD3_k127_1679916_5 Acyltransferase family - - - 0.000000000000000000000000000000000009382 155.0
DYD3_k127_1679916_6 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000002929 129.0
DYD3_k127_1679916_7 PFAM Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000000000000000005362 120.0
DYD3_k127_1679916_9 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.000000000000000001176 92.0
DYD3_k127_1695606_0 Belongs to the IlvD Edd family K13875 - 4.2.1.25 0.0 1049.0
DYD3_k127_1695606_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02056,K10441,K17210 - 3.6.3.17 4.933e-232 732.0
DYD3_k127_1695606_2 Dihydrodipicolinate synthetase family K13876 - 4.2.1.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007945 559.0
DYD3_k127_1695606_3 Periplasmic binding proteins and sugar binding domain of LacI family K02058,K10439,K17213 GO:0003674,GO:0005215,GO:0005488,GO:0005534,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0015144,GO:0015145,GO:0015749,GO:0015757,GO:0016020,GO:0016021,GO:0022857,GO:0030246,GO:0030288,GO:0030313,GO:0031224,GO:0031975,GO:0034219,GO:0036094,GO:0042597,GO:0044425,GO:0044464,GO:0048029,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 525.0
DYD3_k127_1695606_4 Branched-chain amino acid transport system / permease component K02057 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015146,GO:0015591,GO:0015749,GO:0015750,GO:0015752,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0032991,GO:0034219,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 494.0
DYD3_k127_1695606_5 Branched-chain amino acid transport system / permease component K02057 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 473.0
DYD3_k127_1695606_6 FCD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 343.0
DYD3_k127_1695606_7 COG1012 NAD-dependent aldehyde dehydrogenases K13877 - 1.2.1.26 0.0000000000000000000000000000000000000000001582 164.0
DYD3_k127_1695606_8 helix_turn_helix, Lux Regulon - - - 0.00000000000005085 72.0
DYD3_k127_1695606_9 Pfam:DUF4102 - - - 0.0000000001615 65.0
DYD3_k127_1710769_0 COG0183 Acetyl-CoA acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008938 512.0
DYD3_k127_1710769_1 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000003604 220.0
DYD3_k127_1710769_2 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.0000000000000000000000000000000000003806 150.0
DYD3_k127_1710769_3 PFAM Sterol-binding domain protein - - - 0.000000000000000000000000000000018 129.0
DYD3_k127_1710769_4 PFAM alpha beta hydrolase fold K01253,K08253 - 2.7.10.2,3.3.2.9 0.000000000000867 70.0
DYD3_k127_1721417_0 Protein export membrane protein K18299,K18902 - - 0.0 1695.0
DYD3_k127_1721417_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 496.0
DYD3_k127_1721417_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 476.0
DYD3_k127_1721417_3 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 389.0
DYD3_k127_1721417_4 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 295.0
DYD3_k127_1721417_5 CoA-transferase family III - - - 0.0000000000000000000008028 96.0
DYD3_k127_1750705_0 Aerotolerance regulator N-terminal - - - 1.697e-245 793.0
DYD3_k127_1750705_1 membrane - - - 1.259e-216 692.0
DYD3_k127_1750705_10 Protein of unknown function (DUF1285) K09986 - - 0.000000000000000000000000000000000000000000000000000000000000002679 224.0
DYD3_k127_1750705_11 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000000000000000001919 223.0
DYD3_k127_1750705_12 ParE toxin of type II toxin-antitoxin system, parDE K19092 - - 0.0000000000000000000000000000004281 126.0
DYD3_k127_1750705_13 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000001577 124.0
DYD3_k127_1750705_14 transcriptional regulators containing the CopG Arc MetJ DNA-binding domain K07746 - - 0.000000000000000000000000001284 117.0
DYD3_k127_1750705_15 Domain of unknown function (DUF4919) - - - 0.00000000000000000004791 100.0
DYD3_k127_1750705_16 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000004873 79.0
DYD3_k127_1750705_17 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000000000000792 77.0
DYD3_k127_1750705_18 - - - - 0.00003748 50.0
DYD3_k127_1750705_2 ATPase family associated with various cellular activities (AAA) K03924 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 474.0
DYD3_k127_1750705_3 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 - 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003945 431.0
DYD3_k127_1750705_4 aminotransferase K00812,K12252 - 2.6.1.1,2.6.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 420.0
DYD3_k127_1750705_5 Protein of unknown function (DUF817) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009781 346.0
DYD3_k127_1750705_6 Transposase IS116/IS110/IS902 family K07486 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 338.0
DYD3_k127_1750705_7 poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000596 346.0
DYD3_k127_1750705_8 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 303.0
DYD3_k127_1750705_9 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008392 289.0
DYD3_k127_1751632_0 NnrS protein K07234 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 471.0
DYD3_k127_1751632_1 Luciferase-like monooxygenase K20938 - 1.14.14.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 389.0
DYD3_k127_1751632_2 PBP superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 343.0
DYD3_k127_1751632_3 Conserved hypothetical protein 698 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 301.0
DYD3_k127_1751632_4 Crp-like helix-turn-helix domain K13642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007803 284.0
DYD3_k127_1751632_5 transcriptional regulator, Rrf2 family K13771 - - 0.0000000000000000000000000000000000000000001511 165.0
DYD3_k127_1758644_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 1.545e-258 809.0
DYD3_k127_1758644_2 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000004226 118.0
DYD3_k127_1762453_0 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007324 440.0
DYD3_k127_1762453_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 292.0
DYD3_k127_1762453_2 Belongs to the GcvT family K06980,K22073 - - 0.000000003482 59.0
DYD3_k127_176956_0 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 1.137e-253 791.0
DYD3_k127_176956_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004011 582.0
DYD3_k127_176956_2 AraC family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 346.0
DYD3_k127_176956_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 341.0
DYD3_k127_1771561_0 Methionine synthase K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 511.0
DYD3_k127_1771561_1 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006747 421.0
DYD3_k127_1771561_2 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 381.0
DYD3_k127_1771561_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 332.0
DYD3_k127_1771561_4 MlaA lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000252 266.0
DYD3_k127_1771561_5 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.00000000000000000000000000000000000000000000000000000000000000003014 232.0
DYD3_k127_1771561_6 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.00000000000000000000000000000000001394 143.0
DYD3_k127_1771561_7 Putative adhesin - - - 0.0007 43.0
DYD3_k127_1793278_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 2.835e-229 716.0
DYD3_k127_1793278_1 Bacterial extracellular solute-binding protein K11069 - - 1.231e-202 636.0
DYD3_k127_1793278_10 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000000000000000000000000000000981 167.0
DYD3_k127_1793278_11 TIGRFAM TIGR00645 family protein - - - 0.000000000000000000000000000000000000000001424 162.0
DYD3_k127_1793278_12 alpha beta - - - 0.0000000000000000000000000000000000002565 147.0
DYD3_k127_1793278_13 PIN domain K07065 - - 0.000000000000000000000000000000000002051 141.0
DYD3_k127_1793278_14 Plasmid stability protein - - - 0.0000000000000000000000000001425 117.0
DYD3_k127_1793278_15 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000000000000000001977 108.0
DYD3_k127_1793278_16 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.00000000000000000000000539 104.0
DYD3_k127_1793278_17 aspartic-type endopeptidase activity K02464,K02654 - 3.4.23.43 0.0000000007173 67.0
DYD3_k127_1793278_2 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004356 607.0
DYD3_k127_1793278_3 ATPases associated with a variety of cellular activities K11072 - 3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004251 485.0
DYD3_k127_1793278_4 Binding-protein-dependent transport system inner membrane component K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 463.0
DYD3_k127_1793278_5 COG1177 ABC-type spermidine putrescine transport system, permease component II K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 414.0
DYD3_k127_1793278_6 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 369.0
DYD3_k127_1793278_7 Belongs to the short-chain dehydrogenases reductases (SDR) family K16066 - 1.1.1.381 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009669 360.0
DYD3_k127_1793278_8 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 308.0
DYD3_k127_1793278_9 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 323.0
DYD3_k127_1801784_0 phosphonate metabolism K06164 - 2.7.8.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 498.0
DYD3_k127_1801784_1 Catalyzes the breakage of the C-P bond in alpha-D-ribose 1-methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose K06163 - 4.7.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 427.0
DYD3_k127_1801784_2 Bacterial phosphonate metabolism protein (PhnH) K06165 - 2.7.8.37 0.00000000000000000000000000000000000000000002633 169.0
DYD3_k127_1801784_3 Phosphonate C-P lyase system protein PhnG K06166 - 2.7.8.37 0.000000000008388 69.0
DYD3_k127_1803923_0 Biotin carboxylase - - - 5.221e-313 977.0
DYD3_k127_1803923_1 Mate efflux family protein - - - 1.974e-201 638.0
DYD3_k127_1803923_2 Ammonia monooxygenase K07120 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 419.0
DYD3_k127_1803923_3 Predicted nucleotidyltransferase K07074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 341.0
DYD3_k127_1803923_4 HxlR-like helix-turn-helix - - - 0.00000000000004776 72.0
DYD3_k127_1805005_0 Aminotransferase class-III K03851 - 2.6.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 529.0
DYD3_k127_1805005_1 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 484.0
DYD3_k127_1805005_10 ATPases associated with a variety of cellular activities K01996,K11958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 304.0
DYD3_k127_1805005_11 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001662 280.0
DYD3_k127_1805005_12 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008868 277.0
DYD3_k127_1805005_13 dioxygenase of extradiol dioxygenase family K06991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005102 246.0
DYD3_k127_1805005_14 Belongs to the binding-protein-dependent transport system permease family K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006992 248.0
DYD3_k127_1805005_15 FCD - - - 0.00000000000000000000000000000000000000000003027 170.0
DYD3_k127_1805005_16 Protein of unknown function (DUF3237) - - - 0.00000000000000000000000000000000000000000696 161.0
DYD3_k127_1805005_17 PFAM AMP-dependent synthetase and ligase - - - 0.00000000000000000000000000000002401 130.0
DYD3_k127_1805005_18 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000002984 115.0
DYD3_k127_1805005_19 endoribonuclease - - - 0.0002622 49.0
DYD3_k127_1805005_2 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 414.0
DYD3_k127_1805005_3 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 415.0
DYD3_k127_1805005_4 PFAM Alcohol dehydrogenase zinc-binding domain protein K07119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007381 406.0
DYD3_k127_1805005_5 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 358.0
DYD3_k127_1805005_6 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 355.0
DYD3_k127_1805005_7 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 364.0
DYD3_k127_1805005_8 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 347.0
DYD3_k127_1805005_9 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009103 325.0
DYD3_k127_1806318_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1729.0
DYD3_k127_1806318_1 DHH family K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 612.0
DYD3_k127_1806318_2 Chorismate mutase type II K04782 - 4.2.99.21 0.000000000000000000006591 100.0
DYD3_k127_182049_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 1.049e-234 734.0
DYD3_k127_182049_1 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K13598 - 2.7.13.3 1.067e-220 709.0
DYD3_k127_182049_10 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000007436 161.0
DYD3_k127_182049_2 Sigma-54 interaction domain K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 611.0
DYD3_k127_182049_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 452.0
DYD3_k127_182049_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007334 451.0
DYD3_k127_182049_5 His Kinase A (phosphoacceptor) domain K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 449.0
DYD3_k127_182049_6 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 443.0
DYD3_k127_182049_7 Catalyzes the transamination of D-amino acids and their alpha-keto acids K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 355.0
DYD3_k127_182049_8 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000001718 203.0
DYD3_k127_182049_9 COG2867 Oligoketide cyclase lipid transport protein K18588 - - 0.000000000000000000000000000000000000000009418 158.0
DYD3_k127_182529_0 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 287.0
DYD3_k127_182529_1 transcriptional regulator K07736 - - 0.000000000000000000000000000000000000000000000000000001485 194.0
DYD3_k127_182529_2 Staphylococcal nuclease homologue - - - 0.0000000000000000002424 91.0
DYD3_k127_183468_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 360.0
DYD3_k127_183468_1 Bacterioferritin comigratory protein K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000006904 224.0
DYD3_k127_1841056_0 Rieske 2Fe-2S - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 539.0
DYD3_k127_1841056_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 413.0
DYD3_k127_1841056_10 DUF218 domain - - - 0.000000000000000000000000000000000000000000009325 172.0
DYD3_k127_1841056_11 transcriptional regulator - - - 0.0000000000000000000000000000000000000001478 170.0
DYD3_k127_1841056_12 Thioesterase superfamily - - - 0.00000000000000000000000000004785 121.0
DYD3_k127_1841056_2 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 391.0
DYD3_k127_1841056_3 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 381.0
DYD3_k127_1841056_4 PFAM Enoyl-CoA hydratase isomerase K18383 - 4.1.2.41,4.2.1.101 0.000000000000000000000000000000000000000000000000000000000000000000000000000001909 271.0
DYD3_k127_1841056_5 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003424 266.0
DYD3_k127_1841056_6 Alpha beta hydrolase K01066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004442 268.0
DYD3_k127_1841056_7 LysR substrate binding domain K03566 - - 0.00000000000000000000000000000000000000000000000000000002894 209.0
DYD3_k127_1841056_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000005575 192.0
DYD3_k127_1841056_9 Putative transmembrane protein (Alph_Pro_TM) - - - 0.0000000000000000000000000000000000000000000000000001206 206.0
DYD3_k127_1853643_0 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006686 326.0
DYD3_k127_1853643_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005214 291.0
DYD3_k127_1853643_2 Universal stress protein family - - - 0.000000000000000000000000000000000000000000001678 173.0
DYD3_k127_1853643_3 addiction module antidote protein HigA K21498 - - 0.00000000009101 70.0
DYD3_k127_1857689_0 Amidohydrolase family K01485 - 3.5.4.1 6.247e-206 663.0
DYD3_k127_1857689_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 494.0
DYD3_k127_1857689_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 428.0
DYD3_k127_1857689_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005812 336.0
DYD3_k127_1857689_4 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000000000000000000000000000000000000000000000000005715 235.0
DYD3_k127_1857689_5 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000004263 233.0
DYD3_k127_1857689_6 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000000000003781 178.0
DYD3_k127_1857689_7 Exopolysaccharide synthesis, ExoD - - - 0.0000000000000000000000000000002239 131.0
DYD3_k127_1857689_8 Domain of unknown function (DUF4262) - - - 0.00000000000000001333 89.0
DYD3_k127_1857689_9 small membrane protein - - - 0.00000000001541 76.0
DYD3_k127_1880515_0 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 467.0
DYD3_k127_1880515_1 methyl-accepting chemotaxis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008161 254.0
DYD3_k127_1880515_2 COG2202 FOG PAS PAC domain - - - 0.00000000000000000000000000000000000000000000000004721 188.0
DYD3_k127_1880515_3 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000001733 143.0
DYD3_k127_1880515_4 Domain of unknown function (DUF4281) - - - 0.00000000000000000000000000000008223 132.0
DYD3_k127_1882986_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 444.0
DYD3_k127_1882986_1 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000392 228.0
DYD3_k127_1882986_2 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000006442 135.0
DYD3_k127_1882986_3 PFAM Glycosyl transferase family 2 - - - 0.00000002137 56.0
DYD3_k127_1886841_0 Tripartite tricarboxylate transporter TctA family - - - 4.456e-244 761.0
DYD3_k127_1886841_1 NADH:flavin oxidoreductase / NADH oxidase family K00219 - 1.3.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 599.0
DYD3_k127_1886841_10 Domain of unknown function (DUF427) - - - 0.00000000000000000000000000000000000000000000000000001405 190.0
DYD3_k127_1886841_11 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000003192 190.0
DYD3_k127_1886841_12 ArsR family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000004078 186.0
DYD3_k127_1886841_13 Protein of unknown function (DUF1109) - - - 0.000000000000000000000000000000000000000000000000003595 192.0
DYD3_k127_1886841_14 Belongs to the ArsC family K00537 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.20.4.1 0.000000000000000000000000000000000000000000000000218 182.0
DYD3_k127_1886841_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000009161 170.0
DYD3_k127_1886841_16 Sulfotransferase domain - - - 0.00000000000000000000000000000000000003758 155.0
DYD3_k127_1886841_17 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000007325 149.0
DYD3_k127_1886841_18 YCII-related domain - - - 0.0000000000000000000000000000000000001737 147.0
DYD3_k127_1886841_19 Tripartite tricarboxylate transporter TctB family K07794 - - 0.000000000000000000000000000000000002225 144.0
DYD3_k127_1886841_2 FIST_C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 501.0
DYD3_k127_1886841_20 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000001745 140.0
DYD3_k127_1886841_21 Protein of unknown function (DUF692) K09930 - - 0.0000000000000000000000000277 115.0
DYD3_k127_1886841_22 Predicted integral membrane protein (DUF2282) - - - 0.000000000000000003782 87.0
DYD3_k127_1886841_24 Domain of unknown function (DUF4142) K08995 - - 0.0000000008311 70.0
DYD3_k127_1886841_25 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00007062 45.0
DYD3_k127_1886841_3 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 472.0
DYD3_k127_1886841_4 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 366.0
DYD3_k127_1886841_5 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 340.0
DYD3_k127_1886841_6 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 298.0
DYD3_k127_1886841_7 belongs to the UPF0276 family K09930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 294.0
DYD3_k127_1886841_8 Bacterial regulatory proteins, tetR family K16137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006091 253.0
DYD3_k127_1886841_9 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008694 250.0
DYD3_k127_1921593_0 flagellum-specific ATP synthase K02412 - 3.6.3.14 4.018e-196 619.0
DYD3_k127_1921593_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K13584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 393.0
DYD3_k127_1921593_2 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003746 357.0
DYD3_k127_1921593_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004196 271.0
DYD3_k127_1921593_4 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000005157 235.0
DYD3_k127_1921593_5 - - - - 0.0000000000000000173 87.0
DYD3_k127_1921593_6 2,4-dienoyl-coA reductase K00219 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008670,GO:0009056,GO:0009062,GO:0009987,GO:0010181,GO:0016042,GO:0016054,GO:0016491,GO:0016627,GO:0016628,GO:0019395,GO:0019752,GO:0030258,GO:0032553,GO:0032787,GO:0033542,GO:0033543,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0071949,GO:0072329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901575 1.3.1.34 0.000000000000402 69.0
DYD3_k127_1934480_0 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 357.0
DYD3_k127_1934480_1 Biotin carboxylase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 334.0
DYD3_k127_1934480_2 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.00000000000000000000000000000000000000000000000000000007865 208.0
DYD3_k127_1934480_3 dehydratase - - - 0.0000000000000000000000000000000000000000000000000001483 190.0
DYD3_k127_1937037_0 reductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 452.0
DYD3_k127_1937037_1 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000005303 267.0
DYD3_k127_1937037_2 - - - - 0.000000000000000000000000000000000000000000000000001468 190.0
DYD3_k127_1937037_3 UPF0060 membrane protein K09771 - - 0.00000000000000000000000000000000000000000000000006812 179.0
DYD3_k127_1960897_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.179 2.409e-203 640.0
DYD3_k127_1960897_1 KR domain K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005496 336.0
DYD3_k127_1960897_10 malonyl CoA-acyl carrier protein transacylase K00645,K15327 - 2.3.1.39 0.00000000565 57.0
DYD3_k127_1960897_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009012 326.0
DYD3_k127_1960897_3 dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000724 323.0
DYD3_k127_1960897_4 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005635 304.0
DYD3_k127_1960897_5 Domain of unknown function (DUF1732) - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005543 273.0
DYD3_k127_1960897_6 WHG domain - - - 0.000000000000000000000000000000000000000000000000000319 191.0
DYD3_k127_1960897_7 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain - - - 0.00000000000000000000000000000000000000000000000001485 186.0
DYD3_k127_1960897_8 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000005674 131.0
DYD3_k127_1960897_9 Protein of unknown function (DUF3703) - - - 0.00000000000000000004723 91.0
DYD3_k127_1966031_0 Glycine cleavage T-protein C-terminal barrel domain K00302,K22086 - 1.5.3.1,1.5.99.5 9.006e-283 885.0
DYD3_k127_1966031_1 Sarcosine oxidase, delta subunit family K00304,K22085 - 1.5.3.1,1.5.99.5 0.000000000000000000000000000000000009673 137.0
DYD3_k127_1966031_2 Sarcosine oxidase beta subunit K00303,K22084 - 1.5.3.1,1.5.99.5 0.00000000000000000000000000000000648 127.0
DYD3_k127_1968178_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.268e-262 821.0
DYD3_k127_1968178_1 Aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 558.0
DYD3_k127_1968178_2 NADH flavin oxidoreductase NADH oxidase K09461 - 1.14.13.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 528.0
DYD3_k127_1968178_3 PFAM aldo keto reductase K06221 - 1.1.1.346 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 395.0
DYD3_k127_1968178_4 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000004745 173.0
DYD3_k127_1968178_5 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.000000000000000000000000000000000000000000001135 167.0
DYD3_k127_1975959_0 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005604 371.0
DYD3_k127_1975959_1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 324.0
DYD3_k127_1975959_2 UMP catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000267 228.0
DYD3_k127_1975959_3 Domain of unknown function (DUF1849) - - - 0.0000000000000000000000000000000000000000000000004749 188.0
DYD3_k127_1975959_4 Protein of unknown function (DUF3572) - - - 0.0000000000000001314 82.0
DYD3_k127_1976117_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 1.887e-236 742.0
DYD3_k127_1976117_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 - 1.18.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 593.0
DYD3_k127_1976117_2 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006463 304.0
DYD3_k127_1976117_3 ferredoxin K04755 - - 0.0000000000000000000000000000000000000000000000000001438 187.0
DYD3_k127_1976117_4 Epoxide hydrolase N terminus K01253 - 3.3.2.9 0.00000000000000000000000000000000000000000002284 164.0
DYD3_k127_1976117_5 - - - - 0.000000000000000000000000000002496 131.0
DYD3_k127_1976678_0 Iron-regulated protein K07231 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 550.0
DYD3_k127_1976678_1 Di-haem oxidoreductase, putative peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 404.0
DYD3_k127_1976678_2 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 397.0
DYD3_k127_1976678_3 Membrane protein TerC, possibly involved in tellurium resistance K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 415.0
DYD3_k127_1976678_4 Protein of unknown function (DUF1513) K09947 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008158 338.0
DYD3_k127_1976678_5 Imelysin K07338 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005437 256.0
DYD3_k127_1976678_6 Thiol oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000005898 229.0
DYD3_k127_1976678_7 Domain of unknown function (DUF4112) - - - 0.000000000000000000002607 100.0
DYD3_k127_1984030_0 Ethanolamine ammonia-lyase large subunit K03735 - 4.3.1.7 8.178e-217 690.0
DYD3_k127_1984030_1 protein conserved in bacteria K09989 - - 3.691e-195 616.0
DYD3_k127_1984030_2 AAA domain (dynein-related subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 289.0
DYD3_k127_1984030_3 Belongs to the EutC family K03736 - 4.3.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000005504 265.0
DYD3_k127_1984030_4 Enoyl-(Acyl carrier protein) reductase K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000000004607 192.0
DYD3_k127_2002780_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 377.0
DYD3_k127_2002780_1 Zinc-binding dehydrogenase K00001,K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000001494 244.0
DYD3_k127_2002780_2 Phospholipase/Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000001897 217.0
DYD3_k127_2003874_0 Arginase family K01480 - 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 550.0
DYD3_k127_2003874_1 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008967 520.0
DYD3_k127_2003874_2 COG0010 Arginase agmatinase formimionoglutamate hydrolase, arginase family K18459 - 3.5.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 470.0
DYD3_k127_2003874_3 Transcriptional regulator, LysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001157 252.0
DYD3_k127_2003874_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000003716 174.0
DYD3_k127_2003874_5 Methyltransferase domain - - - 0.00000000000000005028 90.0
DYD3_k127_2020763_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576,K22067 - - 7.949e-196 620.0
DYD3_k127_2020763_1 ABC-type nitrate sulfonate bicarbonate transport K15576,K22067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006411 492.0
DYD3_k127_2020763_2 response regulator receiver K07183 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009409 260.0
DYD3_k127_2020763_3 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.000000000000000000000000000000000000000000000000000000000000002917 222.0
DYD3_k127_2020763_4 Protein of unknown function (DUF1329) - - - 0.0000005554 51.0
DYD3_k127_2040515_0 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 0.0 1041.0
DYD3_k127_2040515_1 Belongs to the ParA family K04562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 292.0
DYD3_k127_2040515_2 Virulence activator alpha C-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000002878 235.0
DYD3_k127_2040515_3 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000001304 196.0
DYD3_k127_2040515_4 Flagellar GTP-binding protein K02404 - - 0.000000000000000000000000003339 116.0
DYD3_k127_2040515_5 - - - - 0.000000000000000000001447 111.0
DYD3_k127_2050686_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 494.0
DYD3_k127_2050686_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006409 352.0
DYD3_k127_2050686_2 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 356.0
DYD3_k127_2050686_3 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 314.0
DYD3_k127_2050686_4 Nucleoside 2-deoxyribosyltransferase - - - 0.000000000000000000000000000000000000001483 153.0
DYD3_k127_2050686_5 COG0457 FOG TPR repeat - - - 0.00000000000000000000000002046 124.0
DYD3_k127_2055216_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.533e-278 864.0
DYD3_k127_2055216_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 2.935e-259 821.0
DYD3_k127_2055216_2 Amidohydrolase family K06015 - 3.5.1.81 3.275e-250 783.0
DYD3_k127_2055216_3 Taurine catabolism dioxygenase TauD, TfdA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 432.0
DYD3_k127_2055216_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000007604 172.0
DYD3_k127_2055216_5 PIN domain - - - 0.00000000000000000000001102 106.0
DYD3_k127_2055216_7 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000001389 92.0
DYD3_k127_2055216_8 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K00433 - 1.11.1.10 0.00000000000001271 73.0
DYD3_k127_2055216_9 positive regulation of growth - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000005155 55.0
DYD3_k127_2102280_0 This protein is involved in the repair of mismatches in DNA K03555 - - 2.386e-302 947.0
DYD3_k127_2102280_1 Malic enzyme K00029 - 1.1.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008322 521.0
DYD3_k127_2102280_2 Benzoate membrane transport protein K05782 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 433.0
DYD3_k127_2102280_3 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002251 283.0
DYD3_k127_2102280_4 positive regulation of growth K07746 - - 0.00000000000000000000000000002769 123.0
DYD3_k127_2102280_5 Plasmid stabilization system K19092 - - 0.0000000000000000000001674 100.0
DYD3_k127_2118190_0 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003185 501.0
DYD3_k127_2118190_1 Photosynthesis system II assembly factor YCF48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003745 278.0
DYD3_k127_2123468_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 533.0
DYD3_k127_2123468_1 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 328.0
DYD3_k127_2123468_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000105 275.0
DYD3_k127_2123468_3 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000001257 217.0
DYD3_k127_2123468_4 PFAM LemA family protein K03744 - - 0.000000000000000000000000000000000000000000000000636 182.0
DYD3_k127_2123468_5 dehydratase - - - 0.0000000000000000000000000000000000000000000003521 172.0
DYD3_k127_2123468_6 MaoC like domain - - - 0.000000000000000000000000000000000000009664 150.0
DYD3_k127_2123468_7 - - - - 0.0000000000000000000000004153 111.0
DYD3_k127_2123468_8 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000006645 70.0
DYD3_k127_2126736_0 Biotin carboxylase C-terminal domain K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 1.699e-232 725.0
DYD3_k127_2126736_1 His Kinase A (phosphoacceptor) domain K07679 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009253 462.0
DYD3_k127_2126736_2 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0044424,GO:0044464,GO:0140096 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000004405 264.0
DYD3_k127_2126736_3 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000001518 204.0
DYD3_k127_2126736_4 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000001752 145.0
DYD3_k127_2135574_0 Prephenate dehydratase K04518 - 4.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 367.0
DYD3_k127_2135574_1 Belongs to the Nudix hydrolase family K03426 - 3.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 321.0
DYD3_k127_2135574_2 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 301.0
DYD3_k127_2135574_3 Cytochrome c K08738 - - 0.0000000000000000000000000000000000000000000001762 178.0
DYD3_k127_2139238_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.478e-279 864.0
DYD3_k127_2139238_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006228 410.0
DYD3_k127_2139238_2 Hydrolase, TatD family K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 351.0
DYD3_k127_2139238_3 DNA polymerase III subunit delta K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367 339.0
DYD3_k127_2139238_4 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007686 341.0
DYD3_k127_2139238_5 - - - - 0.0000000000000000000000000000000000000000000000000000002492 209.0
DYD3_k127_2139238_6 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000006704 110.0
DYD3_k127_2149459_0 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 460.0
DYD3_k127_2149459_1 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 441.0
DYD3_k127_2149459_2 Thioredoxin K05838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007239 315.0
DYD3_k127_2149459_3 to the N-terminal domain of Lon protease K01338,K07157 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000001156 239.0
DYD3_k127_2149459_4 Transcriptional regulator, AbiEi antitoxin - - - 0.000000000000000000000000000000000000000000000000000000002238 210.0
DYD3_k127_2149459_5 Aminoacyl-tRNA editing domain K19055 - - 0.0000000000000000000000000000000000000000000000000009633 188.0
DYD3_k127_2149459_6 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000641 151.0
DYD3_k127_2149459_7 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000061 121.0
DYD3_k127_2149459_8 Belongs to the UPF0434 family K09791 - - 0.00000000000000000000107 97.0
DYD3_k127_2167432_0 Terminase RNaseH-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008055 515.0
DYD3_k127_2167432_1 TIGRFAM phage portal protein, HK97 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 392.0
DYD3_k127_2167432_2 Phage capsid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 344.0
DYD3_k127_2167432_3 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.00000000000000000000000000000000000000000000000000000000000000000003175 239.0
DYD3_k127_2167432_4 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000002575 214.0
DYD3_k127_2167432_5 Ribonuclease, BN K07058 - - 0.00000000000000000000000000000000000000002513 166.0
DYD3_k127_2167432_6 Caudovirus prohead serine protease K06904 - - 0.0000000000000000000000000000000000000001068 158.0
DYD3_k127_2167432_8 Phage gp6-like head-tail connector protein - - - 0.0000000000000000002362 96.0
DYD3_k127_2167432_9 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0004795 46.0
DYD3_k127_2188547_0 polysaccharide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 552.0
DYD3_k127_2188547_1 aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 512.0
DYD3_k127_2188547_2 seryl-tRNA synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 483.0
DYD3_k127_2188547_3 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004105 473.0
DYD3_k127_2188547_4 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000001649 211.0
DYD3_k127_2188547_5 aminotransferase class I and II - - - 0.00000000001001 66.0
DYD3_k127_2188547_6 Acyl carrier protein - - - 0.00000000001445 74.0
DYD3_k127_2190667_0 Including yeast histone deacetylase and acetoin utilization protein K04768 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000414 334.0
DYD3_k127_2190667_1 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 310.0
DYD3_k127_2190667_2 Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers K06955 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050664,GO:0051287,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000004118 260.0
DYD3_k127_2190667_3 PFAM fumarylacetoacetate (FAA) hydrolase K01826 - 5.3.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000124 248.0
DYD3_k127_2197830_0 GTA TIM-barrel-like domain - - - 0.0 1493.0
DYD3_k127_2197830_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1225.0
DYD3_k127_2197830_10 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000179 245.0
DYD3_k127_2197830_11 transglycosylase - - - 0.00000000000000000000000000000000000000000000000000000000001045 219.0
DYD3_k127_2197830_12 Phage cell wall peptidase, NlpC P60 family - - - 0.00000000000000000000000000000000000000000000000000000002171 201.0
DYD3_k127_2197830_13 Cell Wall Hydrolase - - - 0.00000000000000000000000000000000008814 143.0
DYD3_k127_2197830_14 Protein of unknown function (DUF2793) - - - 0.0000000000000000000000000001207 130.0
DYD3_k127_2197830_15 PIN domain - - - 0.0000000000000000000000000009868 117.0
DYD3_k127_2197830_17 tape measure - - - 0.000000000007691 73.0
DYD3_k127_2197830_2 PQQ enzyme repeat K17760 - 1.1.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 571.0
DYD3_k127_2197830_3 lysyl-tRNA synthetase K04568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 434.0
DYD3_k127_2197830_4 Phage conserved hypothetical protein BR0599 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 378.0
DYD3_k127_2197830_5 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 360.0
DYD3_k127_2197830_6 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 319.0
DYD3_k127_2197830_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009254 273.0
DYD3_k127_2197830_8 Conserved hypothetical protein 2217 (DUF2460) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001365 260.0
DYD3_k127_2197830_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003322 258.0
DYD3_k127_2237954_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1015.0
DYD3_k127_2237954_1 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009547 478.0
DYD3_k127_2237954_2 Ankyrin repeats (many copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005422 468.0
DYD3_k127_2237954_3 AI-2E family transporter K03548 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000246 253.0
DYD3_k127_2237954_4 Belongs to the DnaA family - - - 0.00000000000000000000000000000000000000000000000000006703 199.0
DYD3_k127_2246735_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 4.352e-246 765.0
DYD3_k127_2246735_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007726 583.0
DYD3_k127_2246735_10 COG0457 FOG TPR repeat - - - 0.0000000001388 65.0
DYD3_k127_2246735_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 343.0
DYD3_k127_2246735_3 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009124 333.0
DYD3_k127_2246735_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000009877 184.0
DYD3_k127_2246735_5 - - - - 0.000000000000000000000000000000000000000000000005853 190.0
DYD3_k127_2246735_6 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000064 175.0
DYD3_k127_2246735_7 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000000000000000001214 162.0
DYD3_k127_2246735_8 Belongs to the UPF0337 (CsbD) family - - - 0.0000000000000000000003287 98.0
DYD3_k127_2246735_9 PRC-barrel domain - - - 0.000000000000001217 85.0
DYD3_k127_2252341_0 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007808 447.0
DYD3_k127_2252341_1 TOBE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 421.0
DYD3_k127_2252341_2 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 412.0
DYD3_k127_2252341_3 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007068 395.0
DYD3_k127_2252341_4 Required for the activity of the bacterial periplasmic transport system of putrescine K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 397.0
DYD3_k127_2252341_5 Protein of unknown function (DUF1329) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008171 383.0
DYD3_k127_2252341_6 Bacterial extracellular solute-binding protein K11069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 389.0
DYD3_k127_2252341_7 Binding-protein-dependent transport system inner membrane component K11071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 372.0
DYD3_k127_2252341_8 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 340.0
DYD3_k127_2252341_9 Carbon-nitrogen hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001187 287.0
DYD3_k127_2253696_0 Belongs to the IlvD Edd family K01687,K22186 - 4.2.1.82,4.2.1.9 0.0 1007.0
DYD3_k127_2253696_1 Aldehyde dehydrogenase family K13877 - 1.2.1.26 1.985e-212 668.0
DYD3_k127_2253696_2 Aldose 1-epimerase K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 504.0
DYD3_k127_2253696_3 Oxidoreductase family, NAD-binding Rossmann fold K00035 - 1.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 474.0
DYD3_k127_2258753_0 AcrB/AcrD/AcrF family - - - 0.0 1629.0
DYD3_k127_2258753_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000542 568.0
DYD3_k127_2258753_10 COG2826 Transposase and inactivated derivatives, IS30 family - - - 0.00000001556 55.0
DYD3_k127_2258753_2 NADH:flavin oxidoreductase / NADH oxidase family K00317 - 1.5.8.1,1.5.8.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 509.0
DYD3_k127_2258753_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 511.0
DYD3_k127_2258753_4 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 460.0
DYD3_k127_2258753_5 Sugar (and other) transporter K07552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 403.0
DYD3_k127_2258753_6 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000004496 221.0
DYD3_k127_2258753_7 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00076,K08081 - 1.1.1.159,1.1.1.206 0.0000000000000000000000000000000000000000000000000000000000001603 222.0
DYD3_k127_2258753_8 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000003562 200.0
DYD3_k127_2258753_9 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000007862 179.0
DYD3_k127_2269658_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 501.0
DYD3_k127_2269658_1 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 332.0
DYD3_k127_2269658_2 Outer mitochondrial membrane transport complex protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 308.0
DYD3_k127_2269658_3 Protein of unknown function, DUF599 - - - 0.000000000000000000000000000000000000000000000003186 181.0
DYD3_k127_2295847_0 PFAM Helicase conserved C-terminal domain K17675 - 3.6.4.13 8.076e-254 815.0
DYD3_k127_2295847_1 Cobaltochelatase CobS subunit N terminal K09882 - 6.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 580.0
DYD3_k127_2295847_10 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000000000009512 152.0
DYD3_k127_2295847_11 Cobalamin biosynthesis protein CobT VWA domain K09883 - 6.6.1.2 0.0000000000000000000000000000000071 129.0
DYD3_k127_2295847_12 Belongs to the BolA IbaG family K05527,K22066 GO:0006807,GO:0008150,GO:0008152,GO:0010467,GO:0019538,GO:0043170,GO:0044238,GO:0051604,GO:0071704,GO:0097428,GO:0106035,GO:1901564 - 0.000000000000000000000000158 108.0
DYD3_k127_2295847_13 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.0000000000000000000000001792 109.0
DYD3_k127_2295847_14 Ribbon-helix-helix domain - - - 0.000000000006677 68.0
DYD3_k127_2295847_15 - - - - 0.0000000002851 72.0
DYD3_k127_2295847_16 - - - - 0.0000000005575 69.0
DYD3_k127_2295847_2 PFAM FAD linked oxidase domain protein K00803 - 2.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 585.0
DYD3_k127_2295847_20 - - - - 0.0001754 45.0
DYD3_k127_2295847_3 Belongs to the HpcH HpaI aldolase family K08691 - 4.1.3.24,4.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 516.0
DYD3_k127_2295847_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 434.0
DYD3_k127_2295847_5 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 439.0
DYD3_k127_2295847_6 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 313.0
DYD3_k127_2295847_7 Phage integrase, N-terminal SAM-like domain K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 334.0
DYD3_k127_2295847_8 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000000000001966 229.0
DYD3_k127_2295847_9 Hemolysin-type calcium-binding repeat 2 copies family protein - - - 0.00000000000000000000000000000000000000000000000002923 203.0
DYD3_k127_2304605_0 NMT1/THI5 like K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 411.0
DYD3_k127_2304605_1 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 368.0
DYD3_k127_2304605_2 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005018 312.0
DYD3_k127_2304605_3 Esterase-like activity of phytase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007114 304.0
DYD3_k127_2304605_4 Twin-arginine translocation pathway signal protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006147 281.0
DYD3_k127_2304605_5 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001528 280.0
DYD3_k127_2304605_6 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005078 281.0
DYD3_k127_2304605_7 - - - - 0.0000000000000347 75.0
DYD3_k127_2306089_0 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 1.209e-210 661.0
DYD3_k127_2306089_1 FAD dependent oxidoreductase - - - 1.192e-196 625.0
DYD3_k127_2306089_2 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203 490.0
DYD3_k127_2306089_3 BetI-type transcriptional repressor, C-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000179 268.0
DYD3_k127_2306089_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000001653 239.0
DYD3_k127_2306089_5 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000000000000001777 220.0
DYD3_k127_2306089_6 - - - - 0.0000000000000000000000000000000000000000000000000000004081 203.0
DYD3_k127_2309445_0 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 488.0
DYD3_k127_2309445_1 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 413.0
DYD3_k127_2309445_2 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008078 327.0
DYD3_k127_2309445_3 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 327.0
DYD3_k127_2309445_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000006624 177.0
DYD3_k127_2309445_5 - - - - 0.000000000000001781 79.0
DYD3_k127_2324932_0 HELICc2 K03722 - 3.6.4.12 3.234e-306 965.0
DYD3_k127_2324932_1 Type II/IV secretion system protein K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008579 482.0
DYD3_k127_2324932_10 regulatory protein TetR - - - 0.0000000000000000000000000000000000000000000136 169.0
DYD3_k127_2324932_11 phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000000000000000000000000000000825 158.0
DYD3_k127_2324932_12 type II secretion system protein K12510 - - 0.0000000000000000000000000000000000000003426 163.0
DYD3_k127_2324932_13 Hep Hag repeat protein K03466,K08884,K21449 - 2.7.11.1 0.000000000000000000000000000000000000006933 164.0
DYD3_k127_2324932_14 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000002921 138.0
DYD3_k127_2324932_15 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.000000000000000000000000000000003399 140.0
DYD3_k127_2324932_16 COG4963 Flp pilus assembly protein, ATPase CpaE K02282 - - 0.00000000000000000006587 103.0
DYD3_k127_2324932_17 - - - - 0.0000000000001006 84.0
DYD3_k127_2324932_18 Transcriptional regulator - - - 0.000003436 55.0
DYD3_k127_2324932_2 AAA domain, putative AbiEii toxin, Type IV TA system K02028,K10025 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003906 393.0
DYD3_k127_2324932_3 Peroxiredoxin K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006165 369.0
DYD3_k127_2324932_4 Bacterial type II and III secretion system protein K02280 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009747 350.0
DYD3_k127_2324932_5 CYTH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 340.0
DYD3_k127_2324932_6 Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000462 266.0
DYD3_k127_2324932_7 OmpW family K07275 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003984 255.0
DYD3_k127_2324932_8 amino acid ABC transporter K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000004457 246.0
DYD3_k127_2324932_9 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000003421 230.0
DYD3_k127_2327367_0 COG1960 Acyl-CoA dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 583.0
DYD3_k127_2327367_1 Enoyl-CoA hydratase/isomerase K01692,K05605 - 3.1.2.4,4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 411.0
DYD3_k127_2327367_2 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 332.0
DYD3_k127_2327367_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000005565 125.0
DYD3_k127_2327367_4 Protein NRT1 PTR FAMILY K14638 - - 0.00000000000000000002083 97.0
DYD3_k127_2344582_0 glutamate--cysteine ligase K01919 - 6.3.2.2 5.962e-203 643.0
DYD3_k127_2344582_1 Belongs to the sigma-70 factor family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 474.0
DYD3_k127_2344582_2 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 375.0
DYD3_k127_2344582_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000009375 221.0
DYD3_k127_2344582_4 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000007457 192.0
DYD3_k127_2344582_5 YCII-related domain - - - 0.00000000000000000000000000000000000000000000006803 172.0
DYD3_k127_2344582_6 COG1073 Hydrolases of the alpha beta superfamily K06889,K07397 - - 0.000000000000000000000000000007511 120.0
DYD3_k127_2344582_7 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000000009422 78.0
DYD3_k127_2344582_8 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.000008581 51.0
DYD3_k127_2363652_0 Histidine kinase - - - 1.79e-299 932.0
DYD3_k127_2363652_1 Poly-beta-hydroxybutyrate polymerase N terminal K03821 - - 3.805e-277 862.0
DYD3_k127_2363652_2 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531 - 3.6.3.2 5.168e-253 794.0
DYD3_k127_2363652_3 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004594 538.0
DYD3_k127_2363652_4 family. transcriptional regulator K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003 268.0
DYD3_k127_2363652_5 PFAM CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004086 256.0
DYD3_k127_236757_0 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006509 516.0
DYD3_k127_236757_1 SPFH domain / Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 467.0
DYD3_k127_236757_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008912 404.0
DYD3_k127_236757_3 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007745 343.0
DYD3_k127_236757_4 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007948 342.0
DYD3_k127_236757_5 peptidase K01295 - 3.4.17.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 323.0
DYD3_k127_236757_6 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 313.0
DYD3_k127_236757_7 NUDIX domain K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004282 282.0
DYD3_k127_236757_8 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000001455 204.0
DYD3_k127_236757_9 Domain of unknown function (DUF1989) - - - 0.000000000000000000000000000000000000000000003066 177.0
DYD3_k127_2370143_0 4-hydroxyphenylacetate 3-hydroxylase K14534 - 4.2.1.120,5.3.3.3 1.997e-291 902.0
DYD3_k127_2370143_1 COG1960 Acyl-CoA dehydrogenases - - - 1.688e-212 665.0
DYD3_k127_2370143_2 PFAM aminoglycoside phosphotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 530.0
DYD3_k127_2370143_3 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008138 363.0
DYD3_k127_2370143_4 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 361.0
DYD3_k127_2370143_5 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003611 252.0
DYD3_k127_2370143_6 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000003296 239.0
DYD3_k127_2370143_7 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000007495 217.0
DYD3_k127_2370143_8 light absorption K06893 - - 0.000000000001748 73.0
DYD3_k127_2370143_9 Domain of unknown function (DUF4345) - - - 0.0005704 48.0
DYD3_k127_2374896_0 Bacterial extracellular solute-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 320.0
DYD3_k127_2374896_1 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003966 283.0
DYD3_k127_2374896_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009503 254.0
DYD3_k127_2374896_3 TOBE domain - - - 0.0000000000000000000000000000003956 132.0
DYD3_k127_2374896_4 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000006266 101.0
DYD3_k127_2387729_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 411.0
DYD3_k127_2387729_1 COG0524 Sugar kinases, ribokinase family K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 407.0
DYD3_k127_2387729_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 324.0
DYD3_k127_2387729_3 TIGRFAM death-on-curing family protein K07341 - - 0.00000000000000000000000000000000000000000000000001007 182.0
DYD3_k127_2387729_4 Integral membrane protein (DUF2244) - - - 0.000000000000000000000000000000000000000000000009077 176.0
DYD3_k127_2387729_5 Etoposide-induced protein 2.4 (EI24) K06203 - - 0.00000000000000000000000000000000000002107 153.0
DYD3_k127_2387729_6 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000004841 146.0
DYD3_k127_2387729_7 - - - - 0.000000000000005589 76.0
DYD3_k127_2387729_8 - - - - 0.0000002848 59.0
DYD3_k127_2409371_0 GTP-binding protein TypA K06207 - - 4.012e-301 934.0
DYD3_k127_2409371_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 2.383e-279 885.0
DYD3_k127_2409371_10 protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000001058 173.0
DYD3_k127_2409371_11 Plasmid stabilization system K19092 - - 0.00000000000000000000000000000254 124.0
DYD3_k127_2409371_12 Helix-turn-helix - - - 0.0000000000000000000000004436 111.0
DYD3_k127_2409371_13 addiction module antidote protein, CC2985 family K07746 - - 0.000000000000000000000001663 105.0
DYD3_k127_2409371_14 - - - - 0.00000000005404 69.0
DYD3_k127_2409371_15 2-Nitropropane dioxygenase - - - 0.00000002053 63.0
DYD3_k127_2409371_16 Protein of unknown function (DUF3106) - - - 0.00007066 54.0
DYD3_k127_2409371_2 hydrolases of the HAD superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 365.0
DYD3_k127_2409371_3 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 333.0
DYD3_k127_2409371_4 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 328.0
DYD3_k127_2409371_5 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 322.0
DYD3_k127_2409371_6 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008422 314.0
DYD3_k127_2409371_7 Belongs to the WrbA family K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 308.0
DYD3_k127_2409371_8 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 293.0
DYD3_k127_2409371_9 Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000002182 199.0
DYD3_k127_2435020_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 1.116e-216 677.0
DYD3_k127_2435020_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006996 397.0
DYD3_k127_2435020_10 protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis - - - 0.0000000000000000000000000000000000000000000007672 170.0
DYD3_k127_2435020_11 Protein conserved in bacteria - - - 0.00000000000000000000000000000007367 130.0
DYD3_k127_2435020_12 Regulator of ribonuclease activity B - - - 0.00000000000000000000009876 109.0
DYD3_k127_2435020_13 Lipopolysaccharide assembly protein A domain - - - 0.00000000000001948 77.0
DYD3_k127_2435020_2 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 365.0
DYD3_k127_2435020_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 366.0
DYD3_k127_2435020_4 DJ-1/PfpI family K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 324.0
DYD3_k127_2435020_5 Sarcosine oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 327.0
DYD3_k127_2435020_6 Ornithine cyclodeaminase/mu-crystallin family K01750,K19743 - 1.5.1.1,4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 313.0
DYD3_k127_2435020_7 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001996 274.0
DYD3_k127_2435020_8 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000002965 243.0
DYD3_k127_2435020_9 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009889,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2001141 - 0.0000000000000000000000000000000000000000000003247 169.0
DYD3_k127_2443597_0 2Fe-2S iron-sulfur cluster binding domain K03863,K21607 - 1.1.1.404 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 477.0
DYD3_k127_2443597_1 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000402 203.0
DYD3_k127_2443597_2 Transcriptional regulator, LysR family K03566 - - 0.000000000000000000000000000000000000000000000000609 184.0
DYD3_k127_2443597_3 ParE toxin of type II toxin-antitoxin system, parDE K19092 - - 0.000000000000000000000000000001748 124.0
DYD3_k127_2443597_4 transcriptional regulators containing the CopG Arc MetJ DNA-binding domain K07746 - - 0.0000000000000000000000003116 108.0
DYD3_k127_2443597_5 WHG domain - - - 0.00000000000000001048 93.0
DYD3_k127_2443597_6 PFAM response regulator receiver K02481,K07712 - - 0.0000000000000007621 82.0
DYD3_k127_2443597_7 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000009798 74.0
DYD3_k127_245300_0 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007704 359.0
DYD3_k127_245300_1 Predicted metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007419 336.0
DYD3_k127_245300_2 PFAM Endonuclease Exonuclease phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005093 332.0
DYD3_k127_245300_3 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000001716 225.0
DYD3_k127_245300_4 Belongs to the HesB IscA family K15724 - - 0.00000000000000000000000000000000000003866 147.0
DYD3_k127_245300_5 Protein of unknown function (DUF3995) - - - 0.0000000000000000000000000007509 119.0
DYD3_k127_2455994_0 TIGRFAM 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 471.0
DYD3_k127_2455994_1 - - - - 0.00000000000005381 83.0
DYD3_k127_2484097_0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - 0.000000000000000000000000000000000000000000000000000000000000000001459 233.0
DYD3_k127_2484097_1 Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP K00868 - 2.7.1.35 0.000000000000000000000000000000000000000000000002763 183.0
DYD3_k127_2484097_2 Papain-like cysteine protease AvrRpt2 - - - 0.00000000000000000000001768 110.0
DYD3_k127_2505473_0 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 302.0
DYD3_k127_2505473_1 COG0564 Pseudouridylate synthases, 23S RNA-specific K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 299.0
DYD3_k127_2505473_2 LysR substrate binding domain K18297 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005713 253.0
DYD3_k127_2505473_3 protein conserved in bacteria K09938 - - 0.0000000000000000000000000000000000000000000000000000005501 202.0
DYD3_k127_2505473_4 TIR domain - - - 0.0000000000000000000000000000000000000000000000000006759 196.0
DYD3_k127_2505473_5 RmlD substrate binding domain K21271,K22320 - 1.1.1.394,1.1.1.412 0.00000000000000000000000000000000000000000000000000222 186.0
DYD3_k127_2505473_6 DoxX K15977 - - 0.0000000000000000000000000000000000004332 145.0
DYD3_k127_2505473_7 NUDIX domain - - - 0.00000000000002974 80.0
DYD3_k127_2511306_0 Belongs to the heme-copper respiratory oxidase family K00404 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 1.059e-240 752.0
DYD3_k127_2511306_1 Nitrogen fixation protein fixG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 518.0
DYD3_k127_2511306_10 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00001376 51.0
DYD3_k127_2511306_2 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 344.0
DYD3_k127_2511306_3 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000005516 248.0
DYD3_k127_2511306_4 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003637 242.0
DYD3_k127_2511306_5 Predicted integral membrane protein (DUF2189) - - - 0.00000000000000000000000000000000000000000000000000000000000000002873 231.0
DYD3_k127_2511306_6 COG2217 Cation transport ATPase K01533 - 3.6.3.4 0.000000000000000000000000000000000000000000000000103 191.0
DYD3_k127_2511306_7 Prokaryotic cytochrome b561 K12262 - - 0.00000000000000000000000000000000000000000001741 168.0
DYD3_k127_2511306_8 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.000000000000000000000005645 106.0
DYD3_k127_2511306_9 FixH - - - 0.000000000000008621 81.0
DYD3_k127_2541297_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 1.081e-238 741.0
DYD3_k127_2541297_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 428.0
DYD3_k127_2541297_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007279 349.0
DYD3_k127_2541297_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006488 326.0
DYD3_k127_2541297_4 - - - - 0.0000003431 52.0
DYD3_k127_2541442_0 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 607.0
DYD3_k127_2541442_1 chorismate mutase - - - 0.00000000000000000000000000000000000000000000000000000001191 204.0
DYD3_k127_2578420_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1510.0
DYD3_k127_257943_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.282e-229 724.0
DYD3_k127_257943_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 490.0
DYD3_k127_257943_2 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 469.0
DYD3_k127_257943_3 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000001791 169.0
DYD3_k127_2586064_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 8.419e-230 717.0
DYD3_k127_2586064_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 507.0
DYD3_k127_2586064_2 ATPase with chaperone activity K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 394.0
DYD3_k127_2586064_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 405.0
DYD3_k127_2586064_4 transcriptional regulator - - - 0.000000000000000000000000000000000000000000005515 165.0
DYD3_k127_2586064_5 Protein of unknown function (DUF2892) - - - 0.00000000000000000000000001678 109.0
DYD3_k127_2589627_0 Receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 533.0
DYD3_k127_2589627_1 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000001996 202.0
DYD3_k127_2589627_2 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000007549 184.0
DYD3_k127_2589627_3 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000003399 140.0
DYD3_k127_2589627_4 Domain of unknown function (DUF4259) - - - 0.0000000000000000000000000000005432 127.0
DYD3_k127_2612019_0 FAD dependent oxidoreductase K00303 - 1.5.3.1 9.121e-235 730.0
DYD3_k127_2612019_1 PHB de-polymerase C-terminus K05973 - 3.1.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008788 575.0
DYD3_k127_2612019_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 365.0
DYD3_k127_2612019_3 ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 306.0
DYD3_k127_2612019_4 Glycine cleavage T-protein C-terminal barrel domain K00302 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001501 256.0
DYD3_k127_2612019_5 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001724 239.0
DYD3_k127_2612019_6 tetR family - - - 0.000000000000000000000000000000000000000000000000000000003322 205.0
DYD3_k127_2612019_7 Sarcosine oxidase, delta subunit family K00304 - 1.5.3.1 0.0000000000000000000000000000000000000000000006325 168.0
DYD3_k127_2612019_8 Domain of unknown function (DUF4304) - - - 0.000000000000000000000000000001627 126.0
DYD3_k127_2612019_9 Psort location Extracellular, score K07126 - - 0.000005377 59.0
DYD3_k127_2618922_0 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 349.0
DYD3_k127_2618922_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000008793 189.0
DYD3_k127_2618922_2 PFAM Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000000002467 136.0
DYD3_k127_2618922_3 Protein required for attachment to host cells - - - 0.000000000000003463 81.0
DYD3_k127_2618922_5 fatty acid desaturase K00508 - 1.14.19.3 0.0000000000002633 70.0
DYD3_k127_2620817_0 Belongs to the heat shock protein 70 family K04046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 527.0
DYD3_k127_2620817_1 exporters of the RND superfamily K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 321.0
DYD3_k127_2620817_2 Glutathione S-transferase, C-terminal domain K11209 GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0015036,GO:0016491,GO:0016667,GO:0050896,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000004938 231.0
DYD3_k127_2620817_3 - - - - 0.00000000000000000000000000000000000000000304 174.0
DYD3_k127_2626179_0 Type I secretion system K16299 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 476.0
DYD3_k127_2626179_1 Type I secretion membrane fusion protein, HlyD K16300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 350.0
DYD3_k127_2626179_2 Belongs to the GST superfamily K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 331.0
DYD3_k127_2626179_3 Glutathione S-transferase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 322.0
DYD3_k127_2626179_4 COG0625 Glutathione S-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 300.0
DYD3_k127_2626179_5 Outer membrane efflux protein K12340 - - 0.0000001298 64.0
DYD3_k127_2643628_0 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 4.477e-255 820.0
DYD3_k127_2643628_1 PD-(D/E)XK nuclease superfamily K16898 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008797 456.0
DYD3_k127_2643628_2 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 355.0
DYD3_k127_2643628_3 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 316.0
DYD3_k127_2643628_4 PFAM Nucleotidyl transferase K00966,K00992 - 2.7.7.13,2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001814 295.0
DYD3_k127_2643628_5 ATPase or kinase K06925,K07102 - 2.7.1.221 0.00000000000000000000000000000000000001708 150.0
DYD3_k127_2653981_0 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K06188 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007735 347.0
DYD3_k127_2653981_1 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379,K18360 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002713 277.0
DYD3_k127_2653981_2 COG0303 Molybdopterin biosynthesis enzyme K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001193 279.0
DYD3_k127_2653981_3 Molybdopterin guanine dinucleotide synthesis protein B K03753 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000294 224.0
DYD3_k127_2664784_0 Bacterial periplasmic substrate-binding proteins K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008895 312.0
DYD3_k127_2664784_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K12972 - 1.1.1.79,1.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000004022 265.0
DYD3_k127_2665617_0 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 437.0
DYD3_k127_2665617_1 Putative stress-induced transcription regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000342 229.0
DYD3_k127_2665617_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000003151 205.0
DYD3_k127_2665617_3 Haem-degrading - - - 0.000000000000000000000000000000000000000000000004201 178.0
DYD3_k127_2665617_4 - - - - 0.000000000002389 73.0
DYD3_k127_26669_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 4.701e-211 662.0
DYD3_k127_26669_1 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000836 387.0
DYD3_k127_26669_2 Protein of unknown function (DUF1329) - - - 0.000000000000000000000000000000000000000000000001285 177.0
DYD3_k127_26669_3 BrnA antitoxin of type II toxin-antitoxin system - - - 0.00000000000002376 82.0
DYD3_k127_26669_4 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.0001425 47.0
DYD3_k127_2667473_0 Arylsulfatase - - - 1.827e-306 959.0
DYD3_k127_2667473_1 Signal transduction histidine kinase - - - 1.299e-228 738.0
DYD3_k127_2667473_10 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003146 289.0
DYD3_k127_2667473_11 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003518 269.0
DYD3_k127_2667473_12 AMP-binding enzyme C-terminal domain K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000714 229.0
DYD3_k127_2667473_13 Dicarboxylate transport - - - 0.00000000000000000000000000000000000000000000000000000000000001722 242.0
DYD3_k127_2667473_14 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000009432 223.0
DYD3_k127_2667473_15 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000008136 222.0
DYD3_k127_2667473_16 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000001076 196.0
DYD3_k127_2667473_17 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000006237 190.0
DYD3_k127_2667473_18 CoA-binding protein K06929 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000001756 177.0
DYD3_k127_2667473_19 Protein of unknown function (DUF2852) - - - 0.000000000000000000000000000000000000008629 149.0
DYD3_k127_2667473_2 PFAM Cys Met metabolism pyridoxal-phosphate-dependent protein K01738,K01740 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003961,GO:0004124,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006555,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0017144,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0050667,GO:0071265,GO:0071266,GO:0071268,GO:0071269,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47,2.5.1.49 5.776e-200 632.0
DYD3_k127_2667473_20 Dsba oxidoreductase - - - 0.00000000000000000000000000000000000008463 157.0
DYD3_k127_2667473_21 Protein conserved in bacteria - - - 0.00000000000000000000000000000000003503 152.0
DYD3_k127_2667473_22 - - - - 0.000000000000000000000000001197 129.0
DYD3_k127_2667473_23 Protein of unknown function (DUF1318) - - - 0.00000000000000000000000009353 111.0
DYD3_k127_2667473_25 Response regulator receiver K03413 GO:0008150,GO:0043900,GO:0043902,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0065007,GO:1900190,GO:1900192 - 0.0000000008479 70.0
DYD3_k127_2667473_3 cytochrome p450 - - - 2.558e-199 628.0
DYD3_k127_2667473_4 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 589.0
DYD3_k127_2667473_5 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 404.0
DYD3_k127_2667473_6 Zn-dependent protease, contains TPR repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 395.0
DYD3_k127_2667473_7 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 378.0
DYD3_k127_2667473_8 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 338.0
DYD3_k127_2667473_9 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 316.0
DYD3_k127_2687266_0 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004011 573.0
DYD3_k127_2687266_1 Conserved Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 496.0
DYD3_k127_2687266_10 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000005283 162.0
DYD3_k127_2687266_11 Chorismate mutase K04092 - 5.4.99.5 0.00000000000000000000000000000000000007899 157.0
DYD3_k127_2687266_12 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.0000000000000000000000000002108 118.0
DYD3_k127_2687266_13 YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the K09780 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000001031 118.0
DYD3_k127_2687266_14 Protein conserved in bacteria K09956 - - 0.000000000000000000009888 96.0
DYD3_k127_2687266_15 Bacterial regulatory proteins, tetR family - - - 0.0000000009831 69.0
DYD3_k127_2687266_16 transcriptional regulator - - - 0.000009836 57.0
DYD3_k127_2687266_2 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 448.0
DYD3_k127_2687266_3 Hep Hag repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006226 410.0
DYD3_k127_2687266_4 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 369.0
DYD3_k127_2687266_5 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004331 260.0
DYD3_k127_2687266_6 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002391 222.0
DYD3_k127_2687266_7 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000000000000000000000002119 212.0
DYD3_k127_2687266_8 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000004822 208.0
DYD3_k127_2687266_9 Class I peptide chain release factor K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.00000000000000000000000000000000000000000000000001081 183.0
DYD3_k127_2690242_0 His Kinase A (phosphoacceptor) domain K20971 - - 0.0 1436.0
DYD3_k127_2690242_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K11959 - - 3.542e-240 746.0
DYD3_k127_2690242_2 Belongs to the binding-protein-dependent transport system permease family K11961 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 548.0
DYD3_k127_2690242_3 Branched-chain amino acid transport system / permease component K11960 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006504 481.0
DYD3_k127_2690242_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 373.0
DYD3_k127_2690242_5 ABC transporter, ATP-binding protein K11962 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 353.0
DYD3_k127_2739985_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1129.0
DYD3_k127_2739985_1 Probable molybdopterin binding domain K07141 - 2.7.7.76 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 511.0
DYD3_k127_2739985_10 Coenzyme PQQ synthesis protein D (PqqD) K06138 - - 0.000000005926 66.0
DYD3_k127_2739985_11 Domain of unknown function (DUF1902) - - - 0.00001032 50.0
DYD3_k127_2739985_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 454.0
DYD3_k127_2739985_3 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003363 344.0
DYD3_k127_2739985_4 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008123 318.0
DYD3_k127_2739985_5 Methyltransferase type 12 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007081 258.0
DYD3_k127_2739985_6 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001557 253.0
DYD3_k127_2739985_7 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 - - 0.000000000000000000000000000000000000000000000000000001163 210.0
DYD3_k127_2739985_8 NifU-like N terminal domain K04488 - - 0.0000000000000000001065 101.0
DYD3_k127_2739985_9 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000000000000000002417 89.0
DYD3_k127_2743970_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 1.712e-289 896.0
DYD3_k127_2743970_1 transporter permease K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 534.0
DYD3_k127_2743970_2 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005414 498.0
DYD3_k127_2743970_3 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004247 378.0
DYD3_k127_2743970_4 Autoinducer binding domain K07782 - - 0.000000000000000000000000000000000000001792 149.0
DYD3_k127_2746508_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1176.0
DYD3_k127_2746508_1 Domain of unknown function (DUF1989) K00605 - 2.1.2.10 3.048e-310 973.0
DYD3_k127_2746508_10 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0030060,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 503.0
DYD3_k127_2746508_11 Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000675 420.0
DYD3_k127_2746508_12 AFG1-like ATPase K06916 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0006091,GO:0006119,GO:0006123,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0017144,GO:0019538,GO:0019637,GO:0019646,GO:0019693,GO:0022900,GO:0022904,GO:0030163,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0034641,GO:0035694,GO:0042773,GO:0042775,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071840,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 417.0
DYD3_k127_2746508_13 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 384.0
DYD3_k127_2746508_14 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 390.0
DYD3_k127_2746508_15 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K21832,K22343 - 1.14.13.238 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 374.0
DYD3_k127_2746508_16 Metallo-beta-lactamase superfamily - GO:0003674,GO:0003824,GO:0004416,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0019243,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0051596,GO:0061727,GO:0071704,GO:1901575,GO:1901615 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000954 336.0
DYD3_k127_2746508_17 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004303 244.0
DYD3_k127_2746508_18 - K22344 - 1.14.13.238 0.000000000000000000000000000000000000000000000000003595 193.0
DYD3_k127_2746508_19 - - - - 0.000000000001252 69.0
DYD3_k127_2746508_2 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 4.368e-266 824.0
DYD3_k127_2746508_3 Ammonium Transporter Family - - - 4.222e-212 668.0
DYD3_k127_2746508_4 Glycine cleavage T-protein C-terminal barrel domain K00605 - 2.1.2.10 5.142e-207 647.0
DYD3_k127_2746508_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 600.0
DYD3_k127_2746508_6 Protein of unknown function (DUF3445) K22342 - 1.14.13.238 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 593.0
DYD3_k127_2746508_7 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008175 531.0
DYD3_k127_2746508_8 hydroxypyruvate reductase K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 535.0
DYD3_k127_2746508_9 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 515.0
DYD3_k127_2756290_0 FIST_C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 375.0
DYD3_k127_2756290_1 Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 355.0
DYD3_k127_2756290_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000009979 83.0
DYD3_k127_2756290_3 FIST_C - - - 0.00000000004919 64.0
DYD3_k127_2771660_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 GO:0003674,GO:0003824,GO:0004084,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006531,GO:0006532,GO:0006551,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009098,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004521 389.0
DYD3_k127_2771660_1 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 372.0
DYD3_k127_2771660_2 Cold shock K03704 - - 0.000000000000000000000002815 103.0
DYD3_k127_2794737_0 AMP-binding enzyme C-terminal domain K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 351.0
DYD3_k127_2794737_1 Competence-damaged protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001276 268.0
DYD3_k127_2794737_2 Cold shock K03704 - - 0.0000000000000000000000000000000008779 131.0
DYD3_k127_2794737_3 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000009344 143.0
DYD3_k127_2794737_4 - - - - 0.0001807 53.0
DYD3_k127_2794845_0 Bacterial protein of unknown function (DUF899) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 368.0
DYD3_k127_2794845_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 374.0
DYD3_k127_2794845_10 - - - - 0.00008419 48.0
DYD3_k127_2794845_2 Iron-containing alcohol dehydrogenase K00096 - 1.1.1.261 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 376.0
DYD3_k127_2794845_3 DeoR C terminal sensor domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009856 355.0
DYD3_k127_2794845_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 292.0
DYD3_k127_2794845_5 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000006797 239.0
DYD3_k127_2794845_6 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000003348 218.0
DYD3_k127_2794845_7 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.000000000000000000000000000000000000000000000000000001303 194.0
DYD3_k127_2794845_8 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000001134 184.0
DYD3_k127_2794845_9 Xylulose kinase - - - 0.00000000000000000000000000000000000000001413 158.0
DYD3_k127_2799815_0 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K00433 - 1.11.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 562.0
DYD3_k127_2799815_1 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000000000000000000000000000001707 221.0
DYD3_k127_2799815_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016832,GO:0019637,GO:0044237,GO:0071704,GO:1901135 2.2.1.2 0.00000000000000000000000000000000000000000005597 172.0
DYD3_k127_2803192_0 NAD(P)H quinone oxidoreductase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 422.0
DYD3_k127_2803192_1 flagellar motor protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 366.0
DYD3_k127_2803192_2 protein conserved in bacteria K09987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009697 260.0
DYD3_k127_2803192_3 MotA TolQ ExbB proton channel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001067 240.0
DYD3_k127_2803192_4 Belongs to the small heat shock protein (HSP20) family K04080 - - 0.000000000000000000000000000000000000000000000000000000915 198.0
DYD3_k127_2803192_6 50S ribosomal protein L31 K02909 - - 0.000000000000682 68.0
DYD3_k127_2803192_7 Protein of unknown function (DUF1192) - - - 0.00000007043 56.0
DYD3_k127_2819190_0 Peptidase family S58 - - - 0.00000000000000000000000000000000000000000000000000000000000003859 231.0
DYD3_k127_2819190_1 VirC1 protein K03496 - - 0.000000000000000000000000000000000000000000000000000000000002256 222.0
DYD3_k127_2819190_2 - - - - 0.0000000000005488 79.0
DYD3_k127_2832879_0 NADH:flavin oxidoreductase / NADH oxidase family K00317 - 1.5.8.1,1.5.8.2 3.381e-220 691.0
DYD3_k127_2832879_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 323.0
DYD3_k127_2832879_2 Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003834 260.0
DYD3_k127_2833896_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.538e-264 821.0
DYD3_k127_2833896_1 Sugar (and other) transporter K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 375.0
DYD3_k127_2833896_2 sporulation resulting in formation of a cellular spore K01449 - 3.5.1.28 0.00000000000000001203 90.0
DYD3_k127_2859213_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 3.124e-205 655.0
DYD3_k127_2859213_1 Protein of unknown function (DUF1298) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005277 538.0
DYD3_k127_2859213_10 COG3637 Opacity protein and related surface antigens - - - 0.000000000000000000000000000000000000000000000000000000823 206.0
DYD3_k127_2859213_11 Methyltransferase domain - - - 0.00000000000000000000000000000000000000001606 164.0
DYD3_k127_2859213_12 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000001646 153.0
DYD3_k127_2859213_13 - - - - 0.0000000000000001524 85.0
DYD3_k127_2859213_2 PFAM lipopolysaccharide biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000776 447.0
DYD3_k127_2859213_3 COG2148 Sugar transferases involved in lipopolysaccharide synthesis K03606,K20997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 414.0
DYD3_k127_2859213_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004308 348.0
DYD3_k127_2859213_5 Glycosyl hydrolases family 18 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000389 304.0
DYD3_k127_2859213_6 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03428,K07003,K15984 - 2.1.1.11,2.1.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005614 299.0
DYD3_k127_2859213_7 Glycosyl transferase WecB/TagA/CpsF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 293.0
DYD3_k127_2859213_8 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002251 278.0
DYD3_k127_2859213_9 Polysaccharide biosynthesis/export protein - - - 0.0000000000000000000000000000000000000000000000000000001003 207.0
DYD3_k127_28627_0 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 400.0
DYD3_k127_28627_1 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 384.0
DYD3_k127_28627_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001595 259.0
DYD3_k127_28627_3 Glutamine amidotransferase class-I - - - 0.00000000000000000000000000000000000000000000000000000003421 204.0
DYD3_k127_28627_4 Protein of unknown function (DUF1194) - - - 0.0000000000000000000000000000000000000000000001393 183.0
DYD3_k127_28627_5 NfeD-like C-terminal, partner-binding K07340 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000001534 102.0
DYD3_k127_2864220_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009380,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 4.164e-266 832.0
DYD3_k127_2864220_1 FAD dependent oxidoreductase K09471 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009041 458.0
DYD3_k127_2864220_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 439.0
DYD3_k127_2864220_3 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007704 306.0
DYD3_k127_2864220_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.000000000000000000000000000000000000000000000000000000000000000000003525 240.0
DYD3_k127_2864220_5 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000005772 109.0
DYD3_k127_2864220_6 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.0000000000000000000002182 98.0
DYD3_k127_2864220_7 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.00000001187 57.0
DYD3_k127_2868072_0 NADH:flavin oxidoreductase / NADH oxidase family K21833 - - 0.0 1122.0
DYD3_k127_2868072_1 4Fe-4S ferredoxin iron-sulfur binding domain protein K21834 - - 1.103e-289 900.0
DYD3_k127_2868072_2 PFAM Rieske 2Fe-2S domain protein K00479 - - 2.139e-217 684.0
DYD3_k127_2868072_3 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 532.0
DYD3_k127_2868072_4 Oxidoreductase FAD-binding domain K00523,K21832 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 511.0
DYD3_k127_2868072_5 helix_turn_helix, arabinose operon control protein K21826 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 388.0
DYD3_k127_2868072_6 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0002677 44.0
DYD3_k127_2868284_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 7.092e-242 779.0
DYD3_k127_2868284_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916 - 6.3.1.5 1.013e-231 729.0
DYD3_k127_2868284_10 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001671 286.0
DYD3_k127_2868284_11 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000005749 198.0
DYD3_k127_2868284_12 diguanylate cyclase - - - 0.00000000000000000000000000000004051 139.0
DYD3_k127_2868284_13 Plasmid stabilization - - - 0.00000000000000000000000009121 110.0
DYD3_k127_2868284_14 transcriptional regulator - - - 0.0000000000000000000001523 100.0
DYD3_k127_2868284_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 597.0
DYD3_k127_2868284_3 Fungal trichothecene efflux pump (TRI12) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 550.0
DYD3_k127_2868284_4 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 516.0
DYD3_k127_2868284_5 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 514.0
DYD3_k127_2868284_6 Patatin phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 499.0
DYD3_k127_2868284_7 NADP-dependent oxidoreductase K07119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 495.0
DYD3_k127_2868284_8 Catalyzes the conversion of acetoacetate to acetone and carbon dioxide K01574 - 4.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 393.0
DYD3_k127_2868284_9 PFAM Alcohol dehydrogenase zinc-binding domain protein K07119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 381.0
DYD3_k127_2869483_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 1.36e-229 723.0
DYD3_k127_2869483_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00162 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 557.0
DYD3_k127_2869483_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 486.0
DYD3_k127_2877593_0 ABC-type oligopeptide transport system periplasmic component K13893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 423.0
DYD3_k127_2877593_1 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 0.0000000000000000000000000000000000000000000000000000000000000000006402 231.0
DYD3_k127_2896777_0 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000569 381.0
DYD3_k127_2896777_1 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002941 250.0
DYD3_k127_2896777_2 Periplasmic binding protein K01999 - - 0.00000000000000000000000000000000000000000000000000000000000001426 222.0
DYD3_k127_2896777_3 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000001519 116.0
DYD3_k127_2906597_0 Proton-conducting membrane transporter K00341,K05568 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 431.0
DYD3_k127_2917990_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 412.0
DYD3_k127_2917990_1 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 384.0
DYD3_k127_296935_0 PFAM Enoyl-CoA hydratase isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 392.0
DYD3_k127_296935_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 406.0
DYD3_k127_296935_2 PFAM Retinal pigment epithelial membrane protein K11159 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 367.0
DYD3_k127_296935_3 Flavodoxin-like fold K00355 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 287.0
DYD3_k127_296935_4 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000001228 258.0
DYD3_k127_296935_5 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box) 5'-GGA TG GA-3' K03556 - - 0.0000000000001108 72.0
DYD3_k127_297030_0 Flavin-binding monooxygenase-like K07222 - - 1.265e-196 625.0
DYD3_k127_297030_1 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000002518 171.0
DYD3_k127_297030_2 transcriptional regulator - - - 0.00000000000000007891 80.0
DYD3_k127_2991905_0 AMP-binding enzyme C-terminal domain K18661 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004735 557.0
DYD3_k127_2991905_1 Malonyl-CoA decarboxylase K01578 - 4.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 536.0
DYD3_k127_2991905_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000005668 110.0
DYD3_k127_2992489_0 sulfuric ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005184 387.0
DYD3_k127_2992489_1 RibD C-terminal domain K00082 - 1.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000000002551 266.0
DYD3_k127_3000040_0 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008483 526.0
DYD3_k127_3000040_1 TIGRFAM type VI secretion system Vgr family protein K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 339.0
DYD3_k127_3000040_2 conserved protein, contains FHA domain K11894 - - 0.000000000000000000000000000000000000000000000000000000000000000000001724 254.0
DYD3_k127_3000040_3 PAAR motif - - - 0.00000000000000000000000000000000002739 144.0
DYD3_k127_3000040_4 ATPase activity - - - 0.0000000000000000000000000000114 125.0
DYD3_k127_3000040_5 Protein conserved in bacteria K11892 - - 0.000877 44.0
DYD3_k127_3002129_0 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 486.0
DYD3_k127_3002129_1 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005162 323.0
DYD3_k127_3002129_2 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007015 275.0
DYD3_k127_3004679_0 Efflux pump membrane transporter K18138,K18142 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0 1174.0
DYD3_k127_3004679_1 Bacterial protein of unknown function (DUF839) K07093 - - 1.978e-226 719.0
DYD3_k127_3004679_10 ATPases associated with a variety of cellular activities K15555 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009829 311.0
DYD3_k127_3004679_11 Protein of unknown function (DUF2817) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001328 297.0
DYD3_k127_3004679_12 overlaps another CDS with the same product name K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001486 276.0
DYD3_k127_3004679_13 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005504 276.0
DYD3_k127_3004679_14 Chromate transporter K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000001458 241.0
DYD3_k127_3004679_15 AcrB/AcrD/AcrF family K18138 - - 0.000000000000000000000000000000000000000000000000000000000000008163 218.0
DYD3_k127_3004679_16 Transcriptional regulator - - - 0.0000000000000000000000000000000000001483 148.0
DYD3_k127_3004679_17 electron transfer activity K08738 GO:0000159,GO:0002931,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005758,GO:0005829,GO:0006091,GO:0006119,GO:0006122,GO:0006123,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006919,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008219,GO:0008287,GO:0008635,GO:0009055,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009628,GO:0009629,GO:0009636,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010310,GO:0010604,GO:0010646,GO:0010647,GO:0010727,GO:0010728,GO:0010730,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0016491,GO:0016999,GO:0017144,GO:0019222,GO:0019637,GO:0019646,GO:0019693,GO:0019866,GO:0019899,GO:0020037,GO:0022900,GO:0022904,GO:0023051,GO:0023052,GO:0023056,GO:0030162,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032268,GO:0032270,GO:0032991,GO:0033554,GO:0034349,GO:0034465,GO:0034599,GO:0034641,GO:0035556,GO:0042221,GO:0042493,GO:0042743,GO:0042773,GO:0042775,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043280,GO:0043281,GO:0043457,GO:0043467,GO:0044093,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045155,GO:0045333,GO:0045862,GO:0046034,GO:0046483,GO:0046688,GO:0046906,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051186,GO:0051193,GO:0051195,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051716,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0070469,GO:0070887,GO:0071704,GO:0071840,GO:0072521,GO:0072593,GO:0080090,GO:0097159,GO:0097190,GO:0097193,GO:1901135,GO:1901360,GO:1901363,GO:1901564,GO:1901700,GO:1901857,GO:1902494,GO:1902531,GO:1902533,GO:1903293,GO:1903426,GO:1903427,GO:2000116,GO:2000377,GO:2000378,GO:2001056,GO:2001233,GO:2001235,GO:2001242,GO:2001244 - 0.000000000000000000000000000000000257 135.0
DYD3_k127_3004679_18 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.00000000000000000000000000849 116.0
DYD3_k127_3004679_2 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 534.0
DYD3_k127_3004679_3 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006651 492.0
DYD3_k127_3004679_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 430.0
DYD3_k127_3004679_5 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 439.0
DYD3_k127_3004679_6 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 GO:0003674,GO:0003824,GO:0016853,GO:0016854,GO:0016855 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 383.0
DYD3_k127_3004679_7 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006176 364.0
DYD3_k127_3004679_8 May be involved in the transport of PQQ or its precursor to the periplasm K06136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 346.0
DYD3_k127_3004679_9 PFAM binding-protein-dependent transport systems inner membrane component K15554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009918 333.0
DYD3_k127_301055_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 505.0
DYD3_k127_301055_1 protein conserved in bacteria K09798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001543 261.0
DYD3_k127_301055_2 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001597 244.0
DYD3_k127_301055_3 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000001762 203.0
DYD3_k127_301055_4 Peptidase family M23 - - - 0.000000000000000006946 84.0
DYD3_k127_3012411_0 Sodium/hydrogen exchanger family K03316 - - 2.14e-207 673.0
DYD3_k127_3012411_1 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 549.0
DYD3_k127_3012411_10 hydrolase K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005822 261.0
DYD3_k127_3012411_11 COG2893 Phosphotransferase system, mannose fructose-specific component IIA K02793 - 2.7.1.191 0.0000000000000000000000000000000000000000000000000000000001446 208.0
DYD3_k127_3012411_12 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000009783 177.0
DYD3_k127_3012411_13 transcriptional regulator - - - 0.000000000000000000000000000000000000000002318 163.0
DYD3_k127_3012411_14 DNA repair protein MmcB-like - - - 0.0000000000000000000000000000000000000004907 153.0
DYD3_k127_3012411_15 the major facilitator superfamily K03446 - - 0.000000000000000000000000000000000000004061 149.0
DYD3_k127_3012411_16 COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism K06023 - - 0.000000000000000000000000000000000006902 143.0
DYD3_k127_3012411_17 system phosphocarrier protein HPr K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006808,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0044424,GO:0044464,GO:0050789,GO:0051179,GO:0051234,GO:0065007,GO:0071702 - 0.000000000000000000000001338 112.0
DYD3_k127_3012411_18 - - - - 0.000005463 53.0
DYD3_k127_3012411_19 Transcriptional regulator - - - 0.00009265 55.0
DYD3_k127_3012411_2 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K03594,K03921,K20087 - 1.14.19.11,1.14.19.2,1.14.19.26,1.16.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 510.0
DYD3_k127_3012411_3 Major facilitator Superfamily K03446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 425.0
DYD3_k127_3012411_4 His Kinase A (phosphoacceptor) domain K15011 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 385.0
DYD3_k127_3012411_5 PFAM chemotaxis sensory transducer K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 367.0
DYD3_k127_3012411_6 Stimulus-sensing domain K14980 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000542 355.0
DYD3_k127_3012411_7 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 300.0
DYD3_k127_3012411_8 multidrug resistance efflux pump K03543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009399 279.0
DYD3_k127_3012411_9 PFAM response regulator receiver K15012 GO:0000156,GO:0000160,GO:0003674,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0023052,GO:0035556,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001993 257.0
DYD3_k127_3038068_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1048.0
DYD3_k127_3038068_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000004431 210.0
DYD3_k127_3051672_0 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004122 588.0
DYD3_k127_3051672_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004493 433.0
DYD3_k127_3051672_2 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 374.0
DYD3_k127_3051672_3 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 306.0
DYD3_k127_3051672_4 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000249 230.0
DYD3_k127_3051672_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000004244 234.0
DYD3_k127_3051672_6 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0002087 54.0
DYD3_k127_3085525_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 9.967e-309 951.0
DYD3_k127_3085525_1 ATPases associated with a variety of cellular activities K02031,K02032,K13892,K13896 - - 5.077e-268 834.0
DYD3_k127_3085525_2 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009187 523.0
DYD3_k127_3085525_3 PFAM FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 511.0
DYD3_k127_3085525_4 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 490.0
DYD3_k127_3085525_5 ABC transporter (Periplasmic binding protein) K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 439.0
DYD3_k127_3085525_6 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005986 419.0
DYD3_k127_3085525_7 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 379.0
DYD3_k127_3085525_8 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 314.0
DYD3_k127_3085525_9 Tetratricopeptide repeat - - - 0.0000007104 57.0
DYD3_k127_3086497_0 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 1.117e-260 812.0
DYD3_k127_3086497_1 AcrB/AcrD/AcrF family - - - 3.701e-221 689.0
DYD3_k127_3086497_2 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033,K15585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 503.0
DYD3_k127_3086497_3 FCD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 311.0
DYD3_k127_3086497_4 N-terminal TM domain of oligopeptide transport permease C - - - 0.00000000000001717 85.0
DYD3_k127_3102960_0 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004236 246.0
DYD3_k127_3102960_1 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000003047 193.0
DYD3_k127_3102960_2 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000001034 192.0
DYD3_k127_3102960_3 Low affinity iron permease - - - 0.000000000000000000000000000000000002746 142.0
DYD3_k127_3102960_4 Plasmid stabilization - - - 0.0000000000000000000000000000000481 137.0
DYD3_k127_3102960_5 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000001357 102.0
DYD3_k127_3102960_6 - - - - 0.000000002269 63.0
DYD3_k127_3102960_7 PRC-barrel domain - - - 0.0000006786 58.0
DYD3_k127_3104945_0 Penicillin amidase K01434 - 3.5.1.11 8.848e-200 649.0
DYD3_k127_3104945_1 Phosphonate metabolism K06162 - 3.6.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 370.0
DYD3_k127_3104945_2 COG1702 Phosphate starvation-inducible protein PhoH K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 353.0
DYD3_k127_3104945_3 UTRA K02043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003157 263.0
DYD3_k127_3104945_4 DinB family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003779 240.0
DYD3_k127_3104945_5 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000000000000000005407 166.0
DYD3_k127_3104945_6 Phosphonate C-P lyase system protein PhnG K06166 - 2.7.8.37 0.000000000000000000004349 95.0
DYD3_k127_310633_0 Acyl-CoA dehydrogenase, middle domain K00253 - 1.3.8.4 7.94e-200 629.0
DYD3_k127_310633_1 Enoyl-CoA hydratase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006952 473.0
DYD3_k127_310633_2 IMP dehydrogenase / GMP reductase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006787 450.0
DYD3_k127_310633_3 enoyl-CoA hydratase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007586 319.0
DYD3_k127_310633_4 Acyl CoA acetate 3-ketoacid CoA K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 284.0
DYD3_k127_3120876_0 carboxylase K01969 - 6.4.1.4 1.462e-282 889.0
DYD3_k127_3120876_1 COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 1.071e-268 854.0
DYD3_k127_3120876_2 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 2.055e-215 672.0
DYD3_k127_3120876_3 COG0119 Isopropylmalate homocitrate citramalate synthases K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000001341 220.0
DYD3_k127_3120876_4 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000006005 207.0
DYD3_k127_3120876_5 Amidohydrolase K07045 - - 0.00000000000000000000000000000004862 133.0
DYD3_k127_3125898_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 3.3e-316 985.0
DYD3_k127_3125898_1 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000000000002349 176.0
DYD3_k127_3128898_0 Flagellar hook protein FlgE K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 309.0
DYD3_k127_3128898_1 - - - - 0.00000000000000000005021 102.0
DYD3_k127_3128898_2 Belongs to the flagella basal body rod proteins family K02396 - - 0.00005941 48.0
DYD3_k127_3134351_0 MMPL family K07003 - - 3.927e-282 889.0
DYD3_k127_3134351_1 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 523.0
DYD3_k127_3134351_10 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K18687 - 6.2.1.41 0.000000000000000000000000000000000000000000000964 171.0
DYD3_k127_3134351_2 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004389 418.0
DYD3_k127_3134351_3 Oxidoreductase NAD-binding domain K15983 - 1.14.13.142 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 355.0
DYD3_k127_3134351_4 Fumarylacetoacetate (FAA) hydrolase family K18364 - 4.2.1.132,4.2.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 336.0
DYD3_k127_3134351_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K16049 - 1.13.11.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000909 328.0
DYD3_k127_3134351_6 Protein of unknown function (DUF1302) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 334.0
DYD3_k127_3134351_7 Serine aminopeptidase, S33 K16050 - 3.7.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 295.0
DYD3_k127_3134351_8 Photosynthesis system II assembly factor YCF48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000609 282.0
DYD3_k127_3134351_9 involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin K00216 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000126 224.0
DYD3_k127_3135387_0 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 407.0
DYD3_k127_3135387_1 Protein of unknown function (DUF1302) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004138 278.0
DYD3_k127_3135387_2 Belongs to the bacterial solute-binding protein 3 family K02030 - - 0.00000000000002105 76.0
DYD3_k127_3136713_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 9.098e-314 975.0
DYD3_k127_3136713_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 388.0
DYD3_k127_3136713_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 350.0
DYD3_k127_3136713_3 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 326.0
DYD3_k127_3136713_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007273 278.0
DYD3_k127_3136713_5 Predicted metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000000000000000000000005215 232.0
DYD3_k127_3136713_6 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000001198 221.0
DYD3_k127_3136713_7 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000000000000000000002846 191.0
DYD3_k127_3136713_8 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000007189 156.0
DYD3_k127_3136713_9 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000002615 143.0
DYD3_k127_3137954_0 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0 1146.0
DYD3_k127_3137954_1 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K03821 - - 2.536e-250 787.0
DYD3_k127_3137954_2 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005979 553.0
DYD3_k127_3137954_3 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004316 259.0
DYD3_k127_3137954_4 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000001794 211.0
DYD3_k127_3137954_5 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000003776 84.0
DYD3_k127_3137954_6 Mechanosensitive ion channel protein K22044 - - 0.000000004366 68.0
DYD3_k127_314735_0 PFAM alpha beta hydrolase fold K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 507.0
DYD3_k127_314735_1 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 441.0
DYD3_k127_314735_2 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 307.0
DYD3_k127_314735_3 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000005621 218.0
DYD3_k127_314735_4 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000000000000000852 210.0
DYD3_k127_314735_5 membrane protein (DUF2207) - - - 0.00000000000000000000000000000000000000000000000000000000006549 218.0
DYD3_k127_314735_6 Response regulator receiver - - - 0.0000000000000000000000000000000002659 136.0
DYD3_k127_314735_7 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000003016 86.0
DYD3_k127_3170967_0 Activator of aromatic catabolism - - - 1.406e-210 671.0
DYD3_k127_3170967_1 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004224 587.0
DYD3_k127_3170967_2 CHASE2 K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007087 395.0
DYD3_k127_317201_0 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00758 - 2.4.2.4 6.82e-212 676.0
DYD3_k127_317201_1 X-Pro dipeptidyl-peptidase (S15 family) K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 540.0
DYD3_k127_317201_10 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000002644 223.0
DYD3_k127_317201_11 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.000000000000000000000000000000000000000000000000000000000009555 209.0
DYD3_k127_317201_12 Protein of unknown function (DUF1302) - - - 0.0000000000000000000000000000000000000000000000000000000001007 229.0
DYD3_k127_317201_13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000006482 197.0
DYD3_k127_317201_14 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000005842 145.0
DYD3_k127_317201_16 cellulose synthase - - - 0.000000000000000000000000597 110.0
DYD3_k127_317201_2 Cellulose synthase K20543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 568.0
DYD3_k127_317201_3 Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004427 529.0
DYD3_k127_317201_4 membrane protein involved in D-alanine export K19294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 518.0
DYD3_k127_317201_5 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008168 467.0
DYD3_k127_317201_6 Taurine catabolism dioxygenase TauD, TfdA family K03119,K22303 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 410.0
DYD3_k127_317201_7 Belongs to the glycosyl hydrolase 8 (cellulase D) family K01179,K20542 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 319.0
DYD3_k127_317201_8 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004863 265.0
DYD3_k127_317201_9 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000002112 232.0
DYD3_k127_3185406_0 PQQ-like domain K00114 - 1.1.2.8 0.0 1114.0
DYD3_k127_3185406_1 NMT1/THI5 like K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006829 384.0
DYD3_k127_3185406_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 354.0
DYD3_k127_3185406_3 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 313.0
DYD3_k127_3185406_4 cytochrome K08738 - - 0.000000000000000000000000000000000000002711 153.0
DYD3_k127_3185406_5 Pentapeptide repeats (8 copies) - - - 0.00000000000000000000000000000005035 127.0
DYD3_k127_3185406_6 - - - - 0.0000000000000001637 82.0
DYD3_k127_3185406_7 Binding-protein-dependent transport system inner membrane component K15554 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0022857,GO:0042908,GO:0042910,GO:0042918,GO:0042959,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.0000000000000002801 93.0
DYD3_k127_3225911_0 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 490.0
DYD3_k127_3225911_1 Von willebrand factor, type a - - - 0.000000000000000000000000000000000000000000000000000000000007117 214.0
DYD3_k127_3225911_2 Uncharacterized protein family UPF0016 - - - 0.000000000000000000000000000000000000000000000000000006061 194.0
DYD3_k127_3226273_0 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 393.0
DYD3_k127_3226273_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000001002 261.0
DYD3_k127_3226273_2 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000008542 168.0
DYD3_k127_3226273_3 alpha beta - - - 0.000000000000000000000000001663 123.0
DYD3_k127_3234964_0 Carboxyl transferase domain K01969 - 6.4.1.4 4.679e-288 894.0
DYD3_k127_3234964_1 Glycosyl transferase family group 2 K20327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 559.0
DYD3_k127_3234964_10 Biotin-requiring enzyme - - - 0.00000000000000000000000000003511 122.0
DYD3_k127_3234964_11 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH - - - 0.0000000000000000000000000157 111.0
DYD3_k127_3234964_12 Plasmid stabilization system K19092 - - 0.00000000000000000000000001856 112.0
DYD3_k127_3234964_13 - K20326 - - 0.0000000000000000000000000193 119.0
DYD3_k127_3234964_14 response regulator, receiver - - - 0.00000000000000001501 87.0
DYD3_k127_3234964_15 Protein of unknown function (DUF1302) - - - 0.000000000004518 76.0
DYD3_k127_3234964_2 Protein of unknown function (DUF1329) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 474.0
DYD3_k127_3234964_3 acid) synthase K03821 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 439.0
DYD3_k127_3234964_4 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006417 418.0
DYD3_k127_3234964_5 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 315.0
DYD3_k127_3234964_6 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001903 258.0
DYD3_k127_3234964_7 Protein of unknown function (DUF1302) - - - 0.000000000000000000000000000000000000000000000000000000000000000000003865 262.0
DYD3_k127_3234964_8 Protein of unknown function (DUF1302) - - - 0.0000000000000000000000000000000000000000000000000000000000001807 239.0
DYD3_k127_3234964_9 NUDIX domain - - - 0.0000000000000000000000000000000000000281 149.0
DYD3_k127_3236834_0 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 338.0
DYD3_k127_3236834_1 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000857 274.0
DYD3_k127_3236834_2 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000229 213.0
DYD3_k127_3236834_3 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000002883 166.0
DYD3_k127_3236834_4 RelB antitoxin K07473 - - 0.00000000000000000000000000006993 118.0
DYD3_k127_3236834_5 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000001962 94.0
DYD3_k127_3236834_6 Domain of unknown function (DUF4279) - - - 0.0000000000007389 80.0
DYD3_k127_3236834_7 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000004489 52.0
DYD3_k127_3261134_0 ABC transporter, ATP-binding protein K02028 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 373.0
DYD3_k127_3261134_1 ATPases associated with a variety of cellular activities K02028,K02029,K09972,K10004 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 373.0
DYD3_k127_3261134_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000007054 130.0
DYD3_k127_3261134_11 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 0.0000009881 50.0
DYD3_k127_3261134_2 Bacterial periplasmic substrate-binding proteins K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 332.0
DYD3_k127_3261134_3 [2Fe-2S] binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 331.0
DYD3_k127_3261134_4 Protein of unknown function (DUF1116) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 305.0
DYD3_k127_3261134_5 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002991 271.0
DYD3_k127_3261134_6 FAD binding domain in molybdopterin dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003384 268.0
DYD3_k127_3261134_7 amino acid ABC transporter K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006653 263.0
DYD3_k127_3261134_8 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000003002 248.0
DYD3_k127_3261134_9 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000000000000128 184.0
DYD3_k127_3267966_0 Protein of unknown function (DUF1302) - - - 0.00000000000000000000000000000000000000000000000000000000291 224.0
DYD3_k127_3267966_1 Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000008672 169.0
DYD3_k127_3267966_2 helix_turn_helix, Lux Regulon - - - 0.00000000000005085 72.0
DYD3_k127_3267966_3 DoxX K15977 - - 0.00002494 55.0
DYD3_k127_327789_0 Serine aminopeptidase, S33 K18457 - 3.5.1.101 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 490.0
DYD3_k127_327789_1 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000623 486.0
DYD3_k127_327789_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 343.0
DYD3_k127_327789_3 Autoinducer binding domain K07782 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001159 257.0
DYD3_k127_3289993_0 Protein of unknown function (DUF1329) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 458.0
DYD3_k127_3289993_1 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0008150,GO:0008152,GO:0015945,GO:0034308,GO:0044281,GO:0044424,GO:0044464,GO:0071704,GO:1901615 1.1.1.1,1.1.1.284 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009624 424.0
DYD3_k127_3289993_2 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003598 250.0
DYD3_k127_3289993_3 Protein of unknown function (DUF1302) - - - 0.000000000000000000000000000000000000000000000000000000000000000001648 255.0
DYD3_k127_3289993_4 helix_turn_helix, Lux Regulon K03556 - - 0.00000000000000000000000009185 125.0
DYD3_k127_3289993_5 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000000000000004993 108.0
DYD3_k127_3322432_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1014.0
DYD3_k127_3322432_1 Fic/DOC family - - - 1.981e-234 732.0
DYD3_k127_3322432_10 Antitoxin ParD - - - 0.0000000000000000000000000000002461 130.0
DYD3_k127_3322432_11 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000000000003485 93.0
DYD3_k127_3322432_12 DDE superfamily endonuclease - - - 0.00000000001324 64.0
DYD3_k127_3322432_13 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000415 64.0
DYD3_k127_3322432_2 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009906 516.0
DYD3_k127_3322432_3 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 513.0
DYD3_k127_3322432_4 Nitronate monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 484.0
DYD3_k127_3322432_5 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 406.0
DYD3_k127_3322432_6 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000002637 263.0
DYD3_k127_3322432_7 COG1335 Amidases related to nicotinamidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001574 256.0
DYD3_k127_3322432_8 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000004518 184.0
DYD3_k127_3322432_9 YjbR - - - 0.00000000000000000000000000000002674 128.0
DYD3_k127_3330260_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1279.0
DYD3_k127_3330260_1 COG1138 Cytochrome c biogenesis factor K02198 - - 1.056e-254 810.0
DYD3_k127_3330260_10 PFAM DinB family protein - - - 0.00000000000000000000000000000000000000000000000000000005455 201.0
DYD3_k127_3330260_11 Redoxin K02199 - - 0.00000000000000000000000000000000000000000000000000005903 192.0
DYD3_k127_3330260_12 Cytochrome c-type biogenesis protein K02200 - - 0.000000000000000000000000000000000000000000000000004249 195.0
DYD3_k127_3330260_13 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 GO:0003674,GO:0003824,GO:0008150,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840 - 0.000000000000000000000000000000000000000000005285 171.0
DYD3_k127_3330260_14 subunit of a heme lyase K02200 - - 0.0000000000000000000000000000000000000007595 161.0
DYD3_k127_3330260_15 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015886,GO:0016020,GO:0031224,GO:0031226,GO:0031235,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098552,GO:0098562,GO:1901678 - 0.000008327 50.0
DYD3_k127_3330260_16 Capsule polysaccharide biosynthesis protein K07265 - - 0.00004522 49.0
DYD3_k127_3330260_2 Capsule polysaccharide K07266 - - 1.495e-210 677.0
DYD3_k127_3330260_3 Belongs to the KdsA family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 413.0
DYD3_k127_3330260_4 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004497 350.0
DYD3_k127_3330260_5 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006767 342.0
DYD3_k127_3330260_6 Autotransporter beta-domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003075 271.0
DYD3_k127_3330260_7 Nudix N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003191 244.0
DYD3_k127_3330260_8 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000000000000000000000000000000000000000000000000001306 226.0
DYD3_k127_3330260_9 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000000000001216 218.0
DYD3_k127_3334965_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1332.0
DYD3_k127_3334965_1 COG3653 N-acyl-D-aspartate D-glutamate deacylase - - - 2.273e-248 779.0
DYD3_k127_3334965_10 MatE K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009736 389.0
DYD3_k127_3334965_11 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003544 369.0
DYD3_k127_3334965_12 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 366.0
DYD3_k127_3334965_13 Fatty acid hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 352.0
DYD3_k127_3334965_14 sterol desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 341.0
DYD3_k127_3334965_15 tRNA (Uracil-5-)-methyltransferase K00557,K03215 - 2.1.1.190,2.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008447 339.0
DYD3_k127_3334965_16 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 313.0
DYD3_k127_3334965_17 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 GO:0000041,GO:0003674,GO:0005215,GO:0005381,GO:0005385,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006829,GO:0006873,GO:0006875,GO:0006876,GO:0006882,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015086,GO:0015093,GO:0015291,GO:0015318,GO:0015341,GO:0015562,GO:0015684,GO:0015691,GO:0016020,GO:0019725,GO:0022804,GO:0022857,GO:0022883,GO:0022890,GO:0030001,GO:0030003,GO:0034220,GO:0034755,GO:0042592,GO:0042802,GO:0044464,GO:0046583,GO:0046873,GO:0046915,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055069,GO:0055073,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070574,GO:0070838,GO:0071577,GO:0071944,GO:0072503,GO:0072507,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:1903874 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005577 301.0
DYD3_k127_3334965_18 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000002971 276.0
DYD3_k127_3334965_19 Protein of unknown function (DUF2817) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002018 262.0
DYD3_k127_3334965_2 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 9.483e-235 748.0
DYD3_k127_3334965_20 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000003093 237.0
DYD3_k127_3334965_21 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000001758 228.0
DYD3_k127_3334965_22 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000006843 213.0
DYD3_k127_3334965_23 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000005315 194.0
DYD3_k127_3334965_24 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000004791 176.0
DYD3_k127_3334965_25 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000001092 162.0
DYD3_k127_3334965_26 Lysin motif - - - 0.00000000000000000000000000000000000000001778 159.0
DYD3_k127_3334965_27 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000001484 155.0
DYD3_k127_3334965_28 protein tyrosine phosphatase - - - 0.000000000000000000000000000000000000002153 155.0
DYD3_k127_3334965_29 4Fe-4S binding domain - - - 0.0000000000000000000000000000000003256 143.0
DYD3_k127_3334965_3 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 3.812e-208 654.0
DYD3_k127_3334965_30 Glutamine synthetase N-terminal domain K01915 - 6.3.1.2 0.0000000000000000000000000000002585 126.0
DYD3_k127_3334965_31 - - - - 0.0000000000000001374 91.0
DYD3_k127_3334965_32 - - - - 0.00000002409 61.0
DYD3_k127_3334965_33 type III restriction protein res subunit K01153 - 3.1.21.3 0.000747 50.0
DYD3_k127_3334965_4 Aminotransferase class-III K16871 - 2.6.1.96 2.814e-195 620.0
DYD3_k127_3334965_5 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007253 426.0
DYD3_k127_3334965_6 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 422.0
DYD3_k127_3334965_7 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 408.0
DYD3_k127_3334965_8 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 398.0
DYD3_k127_3334965_9 rRNA methylase K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 394.0
DYD3_k127_3335967_0 A circularly permuted ATPgrasp - - - 8.643e-229 716.0
DYD3_k127_3335967_1 Surface antigen K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 423.0
DYD3_k127_3335967_10 Protein of unknown function (DUF1778) - - - 0.00000000000000000000004937 101.0
DYD3_k127_3335967_11 Nitrile hydratase beta subunit - - - 0.0000000000000000000001415 106.0
DYD3_k127_3335967_12 Trypsin - - - 0.00001035 55.0
DYD3_k127_3335967_2 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 443.0
DYD3_k127_3335967_3 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009235 402.0
DYD3_k127_3335967_4 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 376.0
DYD3_k127_3335967_5 Nitrile hydratase K01721 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005476 331.0
DYD3_k127_3335967_6 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000002667 273.0
DYD3_k127_3335967_7 Bacterial transglutaminase-like N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000001524 233.0
DYD3_k127_3335967_8 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000009785 228.0
DYD3_k127_3335967_9 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000209 213.0
DYD3_k127_3338205_0 inner membrane component K02011 - - 8.418e-202 643.0
DYD3_k127_3338205_1 ATPases associated with a variety of cellular activities K02010 - 3.6.3.30 0.000000000000000000000000000002958 122.0
DYD3_k127_3344343_0 belongs to the aldehyde dehydrogenase family K09472,K12254 - 1.2.1.54,1.2.1.99 3.548e-227 713.0
DYD3_k127_3344343_1 Alkyl sulfatase dimerisation - - - 8.206e-223 708.0
DYD3_k127_3344343_2 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 5.539e-219 700.0
DYD3_k127_3344343_3 diguanylate cyclase K02488 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0042802,GO:0044424,GO:0044464 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 443.0
DYD3_k127_3344343_4 MFS_1 like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 298.0
DYD3_k127_3344343_5 Nudix hydrolase - - - 0.0000000000000000000000007891 109.0
DYD3_k127_3344343_6 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000000002101 104.0
DYD3_k127_335002_0 5-aminolevulinic acid synthase K00643 - 2.3.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 561.0
DYD3_k127_335002_1 Saccharopine dehydrogenase NADP binding domain - - - 0.00000000000000000000000000000000000000000000005609 171.0
DYD3_k127_3358454_0 oligoendopeptidase F K08602 - - 1.024e-264 829.0
DYD3_k127_3358454_1 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 503.0
DYD3_k127_3358454_10 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000000000000000005608 110.0
DYD3_k127_3358454_11 Thioredoxin domain - - - 0.000000000000000000000002315 117.0
DYD3_k127_3358454_12 addiction module antidote protein, CC2985 family K07746 - - 0.0000000000000000000002366 102.0
DYD3_k127_3358454_2 ABC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 464.0
DYD3_k127_3358454_3 4Fe-4S dicluster domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 466.0
DYD3_k127_3358454_4 signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 379.0
DYD3_k127_3358454_5 nucleoside-diphosphate sugar epimerase K07276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 332.0
DYD3_k127_3358454_6 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006464 268.0
DYD3_k127_3358454_7 FAD binding domain K11472 - - 0.0000000000000000000000000000000000000000000000009029 183.0
DYD3_k127_3358454_8 Protein of unknown function (DUF1244) K09948 - - 0.0000000000000000000000000000000000000000001345 160.0
DYD3_k127_3358454_9 Uncharacterized protein conserved in bacteria (DUF2312) - - - 0.000000000000000000000000000009062 120.0
DYD3_k127_3371021_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1041.0
DYD3_k127_3371021_1 Sulfatase K01133 - 3.1.6.6 1.11e-220 694.0
DYD3_k127_3371021_2 PFAM Substrate-binding region of ABC-type glycine betaine transport system K02002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 373.0
DYD3_k127_3371021_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 305.0
DYD3_k127_3371021_4 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000001275 214.0
DYD3_k127_3371021_5 Phospholipid N-methyltransferase K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000657 164.0
DYD3_k127_3371021_6 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000002965 116.0
DYD3_k127_3371021_7 COG2825 Outer membrane protein - - - 0.000000000000000008476 91.0
DYD3_k127_3384432_0 dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes - - - 8.665e-271 848.0
DYD3_k127_3384432_1 Periplasmic binding protein domain K11959 - - 2.978e-239 745.0
DYD3_k127_3384432_2 Belongs to the binding-protein-dependent transport system permease family K11960 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 610.0
DYD3_k127_3384432_3 Branched-chain amino acid transport system / permease component K11961 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 525.0
DYD3_k127_3384432_4 Branched-chain amino acid ATP-binding cassette transporter K11962 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 370.0
DYD3_k127_3384432_5 ATPases associated with a variety of cellular activities K11963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 355.0
DYD3_k127_3384432_6 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.00000000000000000000000000000000000000000000000000000000000000004483 235.0
DYD3_k127_3384432_7 organic hydroperoxide resistance protein - - - 0.00000000000000000000000000000000000000000000000001037 185.0
DYD3_k127_3384432_8 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000000005483 181.0
DYD3_k127_3385383_0 methylamine dehydrogenase heavy K15229 - 1.4.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 323.0
DYD3_k127_3385383_1 dehydrogenase light chain K15228 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.4.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000002314 265.0
DYD3_k127_3385383_2 methylamine dehydrogenase accessory protein MauD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003735 263.0
DYD3_k127_3385383_3 Methylamine utilisation protein MauE - - - 0.00000000000000000000007784 104.0
DYD3_k127_3385383_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000005046 91.0
DYD3_k127_3385383_5 transcriptional regulator K04033 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006089,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009438,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019172,GO:0019243,GO:0019249,GO:0019438,GO:0019752,GO:0032774,GO:0032787,GO:0034641,GO:0034645,GO:0034654,GO:0042180,GO:0042182,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046185,GO:0046394,GO:0046483,GO:0051596,GO:0061727,GO:0071704,GO:0072330,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901575,GO:1901576,GO:1901615,GO:1901617 - 0.00000001451 63.0
DYD3_k127_3385383_6 Cytochrome c - - - 0.000000623 55.0
DYD3_k127_339745_0 Belongs to the helicase family. UvrD subfamily K16898 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009076 456.0
DYD3_k127_339745_1 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001536 243.0
DYD3_k127_339745_2 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000002152 226.0
DYD3_k127_339745_3 Thioredoxin K03671 - - 0.00000000000000000000000000000000000000000000000007156 180.0
DYD3_k127_339745_4 GMC oxidoreductase K00108 - 1.1.99.1 0.00000000000002105 75.0
DYD3_k127_3400757_0 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004929 440.0
DYD3_k127_3400757_1 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 306.0
DYD3_k127_3400757_2 COG1560 Lauroyl myristoyl acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000002032 256.0
DYD3_k127_3400757_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000003597 184.0
DYD3_k127_3400757_4 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000009048 193.0
DYD3_k127_3400757_5 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH K07746 - - 0.0000000000000000000001319 110.0
DYD3_k127_3400757_6 COG3668 Plasmid stabilization system protein - - - 0.000000000000000000001319 98.0
DYD3_k127_3400757_7 Protein of unknown function (DUF3592) - - - 0.0006047 52.0
DYD3_k127_3459211_0 Type II/IV secretion system protein K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 533.0
DYD3_k127_3459211_1 Bacterial protein of unknown function (DUF839) K07093 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 503.0
DYD3_k127_3459211_10 PFAM General secretion pathway protein K K02460 - - 0.0000000000005302 79.0
DYD3_k127_3459211_11 Outer membrane protein beta-barrel domain - - - 0.000000000001229 79.0
DYD3_k127_3459211_12 general secretion pathway protein K02457 - - 0.00000000001826 73.0
DYD3_k127_3459211_13 Pfam:N_methyl_2 K02458,K02459 - - 0.00000000003132 74.0
DYD3_k127_3459211_15 - - - - 0.000000004935 59.0
DYD3_k127_3459211_16 overlaps another CDS with the same product name K02458 - - 0.000002282 55.0
DYD3_k127_3459211_2 Bacterial type II/III secretion system short domain K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 448.0
DYD3_k127_3459211_3 zeta toxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 311.0
DYD3_k127_3459211_4 Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 298.0
DYD3_k127_3459211_5 Type II secretion system K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005219 299.0
DYD3_k127_3459211_6 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000001502 216.0
DYD3_k127_3459211_7 general secretion pathway protein G K02456 - - 0.000000000000000000000000000000000000000000000000009246 185.0
DYD3_k127_3459211_8 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000000000000000000000000000002578 166.0
DYD3_k127_3459211_9 General secretion pathway protein K02461 - - 0.000000000000000000000000003226 128.0
DYD3_k127_3461539_0 Belongs to the NifD NifK NifE NifN family K02587 - - 1.666e-235 736.0
DYD3_k127_3461539_1 Belongs to the NifD NifK NifE NifN family K02592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005818 586.0
DYD3_k127_3461539_2 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488,K13819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005113 439.0
DYD3_k127_3461539_3 NifQ K15790 - - 0.000000000000000000000000000000000000000000000000000000000000000001231 235.0
DYD3_k127_3461539_4 TIGRFAM nitrogen fixation protein - - - 0.000000000000000000000000000000000000000000000000000004742 199.0
DYD3_k127_3461539_5 Dinitrogenase iron-molybdenum cofactor K02596 - - 0.00000000000000000000000000000000000000000000000000009452 192.0
DYD3_k127_3461539_6 - - - - 0.000000000000000000000000000000000000000003122 156.0
DYD3_k127_3461539_7 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000004216 159.0
DYD3_k127_3461539_8 Rop-like - - - 0.000000000000000007109 91.0
DYD3_k127_3473590_0 Protein of unknown function (DUF3047) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 383.0
DYD3_k127_3473590_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 359.0
DYD3_k127_3473590_2 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000000000004374 233.0
DYD3_k127_3473590_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000003639 232.0
DYD3_k127_3473590_4 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000003898 212.0
DYD3_k127_3473590_5 - - - - 0.0000000000000000000000000000000000000000000000000006218 197.0
DYD3_k127_3473590_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000002391 164.0
DYD3_k127_3473590_8 beta-lactamase activity K07126 - - 0.000000000000000000003187 104.0
DYD3_k127_3491989_0 Precorrin-3B K05934,K13541 - 2.1.1.131,3.7.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008365 344.0
DYD3_k127_3491989_1 Precorrin-2 K03394 - 2.1.1.130,2.1.1.151 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008781 335.0
DYD3_k127_3491989_2 Precorrin-8X methylmutase K06042 - 5.4.99.60,5.4.99.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000503 299.0
DYD3_k127_3491989_3 Nitrite/Sulfite reductase ferredoxin-like half domain K02229 - 1.14.13.83 0.0000000000000000000000000000000000003371 149.0
DYD3_k127_3493613_0 ABC-type polysaccharide polyol phosphate transport system, ATPase component K09689,K09691 - 3.6.3.38 0.0000000000000000000000000000000000000000000000000000000000003773 221.0
DYD3_k127_3493613_1 ABC-2 type transporter K09688,K09690 - - 0.00000000000000000000000000000000002125 145.0
DYD3_k127_3493613_2 Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate K01027 - 2.8.3.5 0.0003245 43.0
DYD3_k127_3495017_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 4.083e-201 644.0
DYD3_k127_3495017_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 445.0
DYD3_k127_3495017_2 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005162 352.0
DYD3_k127_3495017_3 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001179 264.0
DYD3_k127_3495017_4 COG2202 FOG PAS PAC domain - - - 0.00000000000000000000000000000000000006127 150.0
DYD3_k127_3495017_5 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000000000004886 120.0
DYD3_k127_3495017_6 hydrolase, TatD family K03424 - - 0.0000000000000000000000421 107.0
DYD3_k127_3495017_7 Ribosomal protein L34 K02914 - - 0.000000000000001984 76.0
DYD3_k127_3534315_0 AcrB/AcrD/AcrF family K21134 - - 0.0 1391.0
DYD3_k127_3534315_1 Pantothenic acid kinase K00867 GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004516 387.0
DYD3_k127_3534315_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 353.0
DYD3_k127_3534315_3 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 314.0
DYD3_k127_3562489_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K03418 - 3.5.1.56 0.0 1560.0
DYD3_k127_3562489_1 Carbon-nitrogen hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 432.0
DYD3_k127_3562489_2 Belongs to the urease gamma subunit family K14048 - 3.5.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 361.0
DYD3_k127_3562489_3 Sel1-like repeats. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 319.0
DYD3_k127_3562489_4 Rieske (2fe-2S) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 312.0
DYD3_k127_3562489_5 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0000000000000000000000000000000000000000000000001288 181.0
DYD3_k127_3562489_6 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.00000000000000000000000000000000000000000000000612 183.0
DYD3_k127_3562489_7 - - - - 0.000000000000000000000000000000000002748 151.0
DYD3_k127_3562489_8 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 0.0000000006769 59.0
DYD3_k127_3573413_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 9.751e-292 911.0
DYD3_k127_3573413_1 COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K10943 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 613.0
DYD3_k127_3573413_2 The M ring may be actively involved in energy transduction K02409 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 509.0
DYD3_k127_3573413_3 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 476.0
DYD3_k127_3573413_4 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.00000000000000000000000000000000000000006008 153.0
DYD3_k127_3573413_5 Flagellar assembly protein FliH K02411 - - 0.0000000000000000000001124 105.0
DYD3_k127_3573413_6 Flagellar GTP-binding protein K02404 - - 0.0000000000000000000001637 105.0
DYD3_k127_3588130_0 Glutathione S-transferase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005362 411.0
DYD3_k127_3588130_1 Protein of unknown function (DUF692) K09930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 368.0
DYD3_k127_3588130_2 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004119 291.0
DYD3_k127_3588130_3 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000003697 224.0
DYD3_k127_3588130_4 Putative DNA-binding domain - - - 0.0000000000000000000000000000002298 140.0
DYD3_k127_35892_0 Hydantoinase/oxoprolinase N-terminal region - - - 0.0 1062.0
DYD3_k127_35892_1 Hydantoinase B/oxoprolinase - - - 1.845e-313 976.0
DYD3_k127_35892_10 Acetone carboxylase gamma subunit - - - 0.000000000000000000000000000000000000000000000000000000001611 209.0
DYD3_k127_35892_11 transcriptional regulator K19333 - - 0.000000000000000000000000000000000000000000000003125 183.0
DYD3_k127_35892_12 Putative regulatory protein - - - 0.0000000000000000000000000000000000006063 143.0
DYD3_k127_35892_13 Transcriptional regulator - - - 0.00000000000000000000000000000002039 136.0
DYD3_k127_35892_2 Acetyl-coenzyme A synthetase N-terminus - - - 1.162e-276 865.0
DYD3_k127_35892_3 Hydantoinase/oxoprolinase N-terminal region - - - 4.443e-225 714.0
DYD3_k127_35892_4 Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds K01666 - 4.1.3.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005773 616.0
DYD3_k127_35892_5 Winged helix DNA-binding domain K09927 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 591.0
DYD3_k127_35892_6 Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD( ) and coenzyme A. Is the final enzyme in the meta- cleavage pathway for the degradation of aromatic compounds K04073 - 1.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 523.0
DYD3_k127_35892_7 acetamidase formamidase K01455 - 3.5.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 301.0
DYD3_k127_35892_8 transcriptional regulator K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 308.0
DYD3_k127_35892_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005229 260.0
DYD3_k127_359936_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 1.344e-201 646.0
DYD3_k127_359936_1 FAD linked K11472 - - 0.0000000000000000000000000000000000000000001619 168.0
DYD3_k127_359936_2 Nudix hydrolase - - - 0.0000000000000000000000000000000000000006248 156.0
DYD3_k127_359936_3 Predicted membrane protein (DUF2061) - - - 0.0000000000000000000009367 96.0
DYD3_k127_3611123_0 FAD-NAD(P)-binding K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 451.0
DYD3_k127_3611123_1 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000424 364.0
DYD3_k127_3611123_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006852 314.0
DYD3_k127_3611123_3 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000001027 232.0
DYD3_k127_3611123_4 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000009 226.0
DYD3_k127_3611123_5 KR domain - - - 0.000000000000000000000000000000000000000000000004956 181.0
DYD3_k127_3611123_6 - - - - 0.0000000000000000000000001792 114.0
DYD3_k127_3611123_7 response to toxic substance K16347,K16348 - - 0.000000004566 59.0
DYD3_k127_3616602_0 COG2931, RTX toxins and related Ca2 -binding proteins K01406 - 3.4.24.40 2.104e-200 667.0
DYD3_k127_3616602_1 phosphonate ABC transporter, inner membrane subunit K02042 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 320.0
DYD3_k127_3617891_0 C-terminal, D2-small domain, of ClpB protein K11907 - - 0.0 1111.0
DYD3_k127_3617891_1 Type VI secretion protein, EvpB/VC_A0108, tail sheath K11900 - - 1.719e-249 779.0
DYD3_k127_3617891_2 Type VI secretion protein, EvpB/VC_A0108, tail sheath K11899,K11900 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 452.0
DYD3_k127_3617891_3 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003504 246.0
DYD3_k127_3617891_4 ImpA, N-terminal, type VI secretion system K11902 - - 0.00000000000000000000000000000000000000000000000000000000000000000004604 251.0
DYD3_k127_3617891_5 ImpE protein K11898 - - 0.000000000000000000000000000000000000000000000000000000000005643 215.0
DYD3_k127_3623072_0 Protein of unknown function (DUF445) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 343.0
DYD3_k127_3623072_1 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003941 283.0
DYD3_k127_3623072_10 ANTAR K22010 GO:0000160,GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0016020,GO:0023052,GO:0030312,GO:0035556,GO:0040007,GO:0043167,GO:0043168,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071944 - 0.00000000000008479 76.0
DYD3_k127_3623072_2 Protein of unknown function (DUF3089) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008545 265.0
DYD3_k127_3623072_3 KR domain K07124 - - 0.000000000000000000000000000000000000000000000000000000000001243 225.0
DYD3_k127_3623072_4 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000005647 214.0
DYD3_k127_3623072_5 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000003299 205.0
DYD3_k127_3623072_6 Histidine kinase K10125 - 2.7.13.3 0.0000000000000000000000000000000000000007275 168.0
DYD3_k127_3623072_7 type II secretion system protein K12511 - - 0.00000000000000000000000000001655 130.0
DYD3_k127_3623072_8 cheY-homologous receiver domain - - - 0.0000000000000000000006978 108.0
DYD3_k127_3623072_9 Tetratricopeptide repeat - - - 0.000000000000004506 84.0
DYD3_k127_3627330_0 COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases K02230 - 6.6.1.2 0.0 1079.0
DYD3_k127_3627330_1 Nitrite/Sulfite reductase ferredoxin-like half domain K02229 - 1.14.13.83 0.0000000000000000000001524 111.0
DYD3_k127_36411_0 ADP-glyceromanno-heptose 6-epimerase activity K01710,K01784 - 4.2.1.46,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 519.0
DYD3_k127_36411_1 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000001068 272.0
DYD3_k127_36411_2 Acylneuraminate cytidylyltransferase - - - 0.0000000000000000000000000000000000000000000000000004004 192.0
DYD3_k127_366019_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 4.829e-287 912.0
DYD3_k127_366019_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 7.306e-205 643.0
DYD3_k127_366019_2 2-nitropropane dioxygenase K02371 - 1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 520.0
DYD3_k127_366019_3 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003304 306.0
DYD3_k127_366019_4 Domain of unknown function (DUF4115) K15539 - - 0.000000000000000000000026 109.0
DYD3_k127_3681279_0 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006578 269.0
DYD3_k127_3681279_1 sodium ion transport K00351,K16161,K18225 - 1.14.13.25,1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000002531 271.0
DYD3_k127_3681279_2 radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000001212 195.0
DYD3_k127_3681279_3 Belongs to the globin family K05916 - 1.14.12.17 0.00000000000000000000000000000000000000000000001227 174.0
DYD3_k127_3681279_4 - - - - 0.000000000000000000000000000000199 138.0
DYD3_k127_3681279_5 Methane monooxygenase, hydrolase gamma chain K16159 - 1.14.13.25 0.000000000000000000000000000003425 126.0
DYD3_k127_3681279_6 MmoB/DmpM family K16160 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0008150,GO:0008152,GO:0009987,GO:0015049,GO:0015050,GO:0015947,GO:0016491,GO:0016705,GO:0016709,GO:0032991,GO:0043446,GO:0044237,GO:0055114,GO:0071704,GO:1902494 - 0.000000000000000000000000002679 119.0
DYD3_k127_3681279_7 PFAM Methane phenol toluene hydroxylase K16158 - 1.14.13.25 0.00000000008574 66.0
DYD3_k127_3691939_0 Homospermidine synthase K00808 - 2.5.1.44 2.685e-214 692.0
DYD3_k127_3691939_1 COG0835 Chemotaxis signal transduction protein K03408 - - 0.000000000000000000000000000000000000005851 150.0
DYD3_k127_3691939_2 Ribonuclease, BN K07058 - - 0.0000000000000000000000000000000000007901 161.0
DYD3_k127_3691939_3 Domain of unknown function (DUF4282) - - - 0.000002453 53.0
DYD3_k127_3702324_0 RNA polymerase sigma K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 454.0
DYD3_k127_3702324_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 357.0
DYD3_k127_3705617_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.321 0.0 3902.0
DYD3_k127_3705617_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 5.785e-225 705.0
DYD3_k127_3705617_10 D-ala D-ala ligase N-terminus K00075,K01921 - 1.3.1.98,6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009494 389.0
DYD3_k127_3705617_11 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005953 372.0
DYD3_k127_3705617_12 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 366.0
DYD3_k127_3705617_13 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008488 351.0
DYD3_k127_3705617_14 Cell division protein FtsQ K03589 - - 0.00000000000000000000000000000000000000000000000000000001967 210.0
DYD3_k127_3705617_15 MraZ protein, putative antitoxin-like K03925 - - 0.00000000000000000000000000000000000000002414 158.0
DYD3_k127_3705617_16 Zinc-finger domain - - - 0.000000000000000000000005857 104.0
DYD3_k127_3705617_17 secreted (periplasmic) protein - - - 0.00000000000000004009 93.0
DYD3_k127_3705617_18 - - - - 0.0000000003836 65.0
DYD3_k127_3705617_2 PFAM Penicillin binding protein transpeptidase domain K03587 - 3.4.16.4 1.268e-200 650.0
DYD3_k127_3705617_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 564.0
DYD3_k127_3705617_4 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004776 527.0
DYD3_k127_3705617_5 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 527.0
DYD3_k127_3705617_6 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 478.0
DYD3_k127_3705617_7 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008114 458.0
DYD3_k127_3705617_8 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 460.0
DYD3_k127_3705617_9 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009501 453.0
DYD3_k127_3710877_0 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 379.0
DYD3_k127_3710877_1 dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 372.0
DYD3_k127_3710877_2 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000001525 209.0
DYD3_k127_3713455_0 Sh3 type 3 domain protein - - - 5.297e-232 737.0
DYD3_k127_3713455_1 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 441.0
DYD3_k127_3713455_2 PFAM Resolvase - - - 0.000000000000000000000000000029 117.0
DYD3_k127_3713455_3 Helix-turn-helix domain of resolvase - - - 0.0000000000000005078 79.0
DYD3_k127_3713455_4 Flavin reductase like domain - - - 0.0000000000001888 71.0
DYD3_k127_3713455_5 Site-specific recombinases, DNA invertase Pin homologs K14060 - - 0.000006541 53.0
DYD3_k127_3713455_6 Belongs to the 'phage' integrase family - - - 0.0001269 48.0
DYD3_k127_3715643_0 Succinyl-CoA ligase like flavodoxin domain - - - 0.0 1461.0
DYD3_k127_3715643_1 PFAM ATP-grasp domain - - - 1.938e-238 741.0
DYD3_k127_3715643_10 membrane-bound lytic murein transglycosylase K08304 - - 0.00000000000000003081 82.0
DYD3_k127_3715643_11 - - - - 0.0000000000000002009 84.0
DYD3_k127_3715643_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 2.9e-208 676.0
DYD3_k127_3715643_3 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 364.0
DYD3_k127_3715643_4 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 335.0
DYD3_k127_3715643_5 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004338 286.0
DYD3_k127_3715643_6 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.00000000000000000000000000000000000000000000000000000000004431 210.0
DYD3_k127_3715643_7 Protein of unknown function (DUF560) - - - 0.00000000000000000000000000000000000000000000000000000008738 210.0
DYD3_k127_3715643_8 - - - - 0.000000000000000000000000000000000000000234 155.0
DYD3_k127_3715643_9 Smr domain - - - 0.00000000000000000000000000001981 124.0
DYD3_k127_3717304_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11103 - - 6.536e-198 633.0
DYD3_k127_3717304_1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 544.0
DYD3_k127_3717304_2 His Kinase A (phosphoacceptor) domain K10125 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 505.0
DYD3_k127_3717304_3 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000009654 236.0
DYD3_k127_3717304_4 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000171 235.0
DYD3_k127_3717304_5 redox-sensitive transcriptional activator SoxR K13639 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0044424,GO:0044464,GO:0048037,GO:0050896,GO:0051536,GO:0051537,GO:0051540 - 0.000000000000000000000000000000000000000000000000000000000000009881 218.0
DYD3_k127_3717304_6 LysR substrate binding domain K03566 - - 0.00000000000000000000000000000000000000000000000000009812 197.0
DYD3_k127_3717304_7 Forkhead associated domain - - - 0.00000003413 61.0
DYD3_k127_3728759_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008084 385.0
DYD3_k127_3728759_1 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 347.0
DYD3_k127_3728759_2 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007554 351.0
DYD3_k127_3728759_3 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.000000000000000000000000000000000000000000000000002778 191.0
DYD3_k127_3728759_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000002386 190.0
DYD3_k127_3728759_5 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000000000000000000000000145 163.0
DYD3_k127_3728759_6 Glyoxalase-like domain - - - 0.000000000000000000000000000000000001257 141.0
DYD3_k127_3728759_7 Phosphoribosyl-ATP K01523 - 3.6.1.31 0.0000000000000000000000001514 111.0
DYD3_k127_3728759_8 Uncharacterized protein family UPF0016 - - - 0.000000000000000006061 88.0
DYD3_k127_3728759_9 - - - - 0.000000000000002461 89.0
DYD3_k127_3731580_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 481.0
DYD3_k127_3731580_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009058 469.0
DYD3_k127_3731580_2 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 385.0
DYD3_k127_3731580_3 branched-chain amino acid K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 347.0
DYD3_k127_3731580_4 - - - - 0.00000000000000000000009247 109.0
DYD3_k127_3771298_0 MgsA AAA+ ATPase C terminal K07478 GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0030894,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 589.0
DYD3_k127_3771298_1 Belongs to the peptidase S1C family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 500.0
DYD3_k127_3771826_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 2.119e-218 700.0
DYD3_k127_3771826_1 Histidine ammonia-lyase K01745 - 4.3.1.3 6.624e-210 665.0
DYD3_k127_3771826_10 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000004077 237.0
DYD3_k127_3771826_11 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000000000000000000000000000000000000000000008731 225.0
DYD3_k127_3771826_12 UTRA - - - 0.00000000000000000000000000000000000000000000000000000000000004774 222.0
DYD3_k127_3771826_13 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000001392 189.0
DYD3_k127_3771826_14 Staphylococcal nuclease homologue - - - 0.00000000000000000000000000000000000000000003602 169.0
DYD3_k127_3771826_2 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 589.0
DYD3_k127_3771826_3 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009708 569.0
DYD3_k127_3771826_4 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 477.0
DYD3_k127_3771826_5 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009652 425.0
DYD3_k127_3771826_6 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 389.0
DYD3_k127_3771826_7 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 390.0
DYD3_k127_3771826_8 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 344.0
DYD3_k127_3771826_9 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000005058 241.0
DYD3_k127_3861075_0 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001387 283.0
DYD3_k127_3861075_1 Putative tRNA binding domain K06878 GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000009501 194.0
DYD3_k127_3861075_2 transcriptional regulator - - - 0.00000000000000000000000000000000000000001069 160.0
DYD3_k127_3861075_3 Phasin protein - - - 0.00000000000000000000000000000000003786 138.0
DYD3_k127_3861075_4 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.0000000000000000000007301 96.0
DYD3_k127_3861075_5 Phasin protein - - - 0.0000000000000003043 85.0
DYD3_k127_3862442_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1206.0
DYD3_k127_3862442_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1072.0
DYD3_k127_3862442_2 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 295.0
DYD3_k127_3862442_3 Gram-negative porin K08720 - - 0.0000000000000000000000000000000000000000000000000000000163 211.0
DYD3_k127_3862442_4 Domain of unknown function (DUF3576) - - - 0.000000000000000000000000000000000000000000000000003701 186.0
DYD3_k127_3862442_5 Gram-negative porin K08720 - - 0.00000000000000000000000000000000000000000000000001293 193.0
DYD3_k127_3862442_6 Protein of unknown function (DUF559) - - - 0.000000000000000000000000000002135 124.0
DYD3_k127_3862442_7 Lipopolysaccharide-assembly K03643 - - 0.00000000000000000000007676 104.0
DYD3_k127_3862442_8 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000008038 57.0
DYD3_k127_3862778_0 KR domain - - - 0.0 1107.0
DYD3_k127_3862778_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 544.0
DYD3_k127_3864630_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1292.0
DYD3_k127_3864630_1 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 396.0
DYD3_k127_3864630_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 293.0
DYD3_k127_3864630_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000008119 265.0
DYD3_k127_3864630_4 Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000000000000000000000000000000003517 170.0
DYD3_k127_3864630_5 - - - - 0.0000000000000000000000001351 106.0
DYD3_k127_3864630_6 Domain of unknown function (DUF4167) - - - 0.00000000000000000000003926 110.0
DYD3_k127_3864630_7 - - - - 0.0000000000000008557 78.0
DYD3_k127_387412_0 PFAM N-acetylneuraminic acid synthase, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008169 346.0
DYD3_k127_387412_1 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003941 340.0
DYD3_k127_387412_2 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003615 274.0
DYD3_k127_387412_3 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000002224 182.0
DYD3_k127_387412_4 Belongs to the flagella basal body rod proteins family - - - 0.000000000000000000000000000000000000396 155.0
DYD3_k127_387412_5 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000006587 130.0
DYD3_k127_387412_6 bacterial-type flagellum-dependent cell motility K02388,K02396 - - 0.0000003092 62.0
DYD3_k127_387789_0 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0 1541.0
DYD3_k127_387789_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K07516 - 1.1.1.35 2.601e-315 983.0
DYD3_k127_387789_2 Acyl-CoA dehydrogenase, middle domain - - - 3.956e-218 680.0
DYD3_k127_387789_3 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 7.923e-197 622.0
DYD3_k127_387789_4 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 524.0
DYD3_k127_387789_5 Acyl-CoA thioesterase K10805 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 381.0
DYD3_k127_387789_6 Two-component sensor kinase N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000006907 254.0
DYD3_k127_387789_7 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000006452 234.0
DYD3_k127_3908821_0 GMC oxidoreductase K00108 - 1.1.99.1 3.676e-290 900.0
DYD3_k127_3908821_1 belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 2.749e-224 714.0
DYD3_k127_3908821_10 Serine hydrolase K07002 - - 0.00003359 47.0
DYD3_k127_3908821_2 Serine hydroxymethyltransferase - - - 1.07e-200 634.0
DYD3_k127_3908821_3 Substrate binding domain of ABC-type glycine betaine transport system K02002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 475.0
DYD3_k127_3908821_4 COG4175 ABC-type proline glycine betaine transport system ATPase component K02000 GO:0000166,GO:0003674,GO:0004888,GO:0005034,GO:0005215,GO:0005275,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006950,GO:0006970,GO:0006972,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0009628,GO:0009987,GO:0015695,GO:0015696,GO:0015697,GO:0015837,GO:0015838,GO:0016020,GO:0016021,GO:0017076,GO:0022857,GO:0023052,GO:0030554,GO:0031224,GO:0031460,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0038023,GO:0043167,GO:0043168,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0060089,GO:0065007,GO:0071702,GO:0071705,GO:0071944,GO:0072337,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 453.0
DYD3_k127_3908821_5 Binding-protein-dependent transport system inner membrane component K02001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 370.0
DYD3_k127_3908821_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000003136 216.0
DYD3_k127_3908821_7 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00000000000000000000000000000002856 127.0
DYD3_k127_3908821_8 - - - - 0.000000000000000000000000001842 122.0
DYD3_k127_3908821_9 Electron transfer flavoprotein domain K03521 - - 0.00000000002354 65.0
DYD3_k127_3910534_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1203.0
DYD3_k127_3910534_1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K15738 - - 5.877e-254 790.0
DYD3_k127_3910534_2 effector of murein hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000004137 246.0
DYD3_k127_3910534_3 LrgA family - - - 0.000000000000000000001808 98.0
DYD3_k127_3919186_0 Succinate dehydrogenase fumarate reductase, flavoprotein subunit K05898 - 1.3.99.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006674 593.0
DYD3_k127_3919186_1 Haemolysin-type calcium binding protein related domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 577.0
DYD3_k127_3919186_2 Belongs to the AB hydrolase superfamily. MetX family K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 383.0
DYD3_k127_3919186_3 Bacterial periplasmic substrate-binding proteins K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009095 325.0
DYD3_k127_3919186_4 Phytanoyl-CoA dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005062 281.0
DYD3_k127_3919186_5 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059,K03366 - 1.1.1.100,1.1.1.304,1.1.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008018 276.0
DYD3_k127_3919186_6 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000002443 230.0
DYD3_k127_3919186_7 Belongs to the 'phage' integrase family - - - 0.00000000000259 71.0
DYD3_k127_3934422_0 Belongs to the aldehyde dehydrogenase family K00137 - 1.2.1.19 3.746e-249 775.0
DYD3_k127_3934422_1 ABC-type spermidine putrescine transport system, permease component I K02054 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007556 456.0
DYD3_k127_3934422_2 Binding-protein-dependent transport system inner membrane component K02053,K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006861 401.0
DYD3_k127_3939139_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1011.0
DYD3_k127_3939139_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 538.0
DYD3_k127_3939139_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K09565 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000003845 248.0
DYD3_k127_3939139_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000002579 191.0
DYD3_k127_3939139_4 Cyclic nucleotide-monophosphate binding domain - - - 0.000000002573 64.0
DYD3_k127_3945706_0 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 574.0
DYD3_k127_3945706_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 319.0
DYD3_k127_3945706_2 KR domain K00059 - 1.1.1.100 0.000000000000000000000893 97.0
DYD3_k127_3952832_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.0 1309.0
DYD3_k127_3952832_1 TIGRFAM Nitrate transport ATP-binding K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 380.0
DYD3_k127_3952832_2 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050,K15577 - - 0.0000000000000000000000000000000000000000000000000000000000005132 213.0
DYD3_k127_3952832_3 Nitrite reductase NAD(P)H , small subunit K00363 - 1.7.1.15 0.0000000000000000000000000000000000003191 156.0
DYD3_k127_3953620_0 COQ9 K18587 - - 0.00000000000000000000000000000000000000000000000000000000005544 211.0
DYD3_k127_3953620_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000002278 202.0
DYD3_k127_3953620_2 Transglycosylase associated protein - - - 0.0000000000000000000002067 100.0
DYD3_k127_3953620_3 LTXXQ motif family protein - - - 0.0000000001522 69.0
DYD3_k127_3985210_0 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001959 248.0
DYD3_k127_3985210_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000006869 212.0
DYD3_k127_3985210_2 Belongs to the sigma-70 factor family K03088 - - 0.0000000000000000000000000000000000000000000000003879 177.0
DYD3_k127_3985210_3 COG1573 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000001214 74.0
DYD3_k127_3994376_0 trisaccharide binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006805 352.0
DYD3_k127_3994376_1 COG3143 Chemotaxis protein K03414 - - 0.00000000000000000000000000000000000005749 150.0
DYD3_k127_3994376_2 PFAM MgtE intracellular - - - 0.00000000000000000000000000000254 130.0
DYD3_k127_3994376_3 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.0000000000000000000000005476 106.0
DYD3_k127_3994376_4 - - - - 0.0000000001828 69.0
DYD3_k127_3998481_0 Cobalamin biosynthesis protein CobT VWA domain K09883 - 6.6.1.2 4.252e-237 746.0
DYD3_k127_3998481_1 Putative vitamin uptake transporter K09125 GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016020,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046116,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072531,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1990397 - 0.000000000000000000000000000000000000000000000000000000001391 204.0
DYD3_k127_3998481_2 Esterase-like activity of phytase - - - 0.0000000000000000000000000000000000000000000001348 181.0
DYD3_k127_4003149_0 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008947 494.0
DYD3_k127_4003149_1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01581 - 4.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 397.0
DYD3_k127_4003149_2 PFAM heat shock protein DnaJ domain protein K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 354.0
DYD3_k127_4003149_3 PFAM Mo-dependent nitrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004302 277.0
DYD3_k127_4003149_4 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001272 250.0
DYD3_k127_4003149_5 ParE toxin of type II toxin-antitoxin system, parDE K19092 - - 0.00000000000000000000000000000000001201 141.0
DYD3_k127_4003149_6 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH K07746 - - 0.000000000000000000000000003845 112.0
DYD3_k127_4003149_7 Domain of unknown function (DUF5076) - - - 0.0000000000001964 74.0
DYD3_k127_4013795_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 523.0
DYD3_k127_4013795_1 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 438.0
DYD3_k127_4013795_2 SpoU rRNA Methylase family K03437 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001286 278.0
DYD3_k127_4013795_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000007304 240.0
DYD3_k127_4013795_4 Uncharacterized protein conserved in bacteria (DUF2272) - - - 0.000000004458 65.0
DYD3_k127_402448_0 Polysaccharide biosynthesis/export protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 424.0
DYD3_k127_402448_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007884 407.0
DYD3_k127_402448_2 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 426.0
DYD3_k127_402448_3 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 327.0
DYD3_k127_402448_4 Cytidylyltransferase K00983 - 2.7.7.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 307.0
DYD3_k127_402448_5 PFAM Capsule polysaccharide biosynthesis protein K07265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001643 284.0
DYD3_k127_402448_6 Belongs to the mannose-6-phosphate isomerase type 2 family K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000004768 242.0
DYD3_k127_402448_7 Belongs to the inositol monophosphatase superfamily - - - 0.00000000000000000000000000000000002231 145.0
DYD3_k127_402448_8 TIGRFAM 6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000002942 132.0
DYD3_k127_402448_9 2-keto-4-pentenoate hydratase K02554 - 4.2.1.80 0.00000000009336 72.0
DYD3_k127_4049125_0 AMP-binding enzyme C-terminal domain K00666,K02182,K20034 - 6.2.1.44,6.2.1.48 4.27e-256 799.0
DYD3_k127_4049125_1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 606.0
DYD3_k127_4049125_2 Glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 331.0
DYD3_k127_4049125_3 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000009059 245.0
DYD3_k127_4049125_4 Belongs to the GcvT family K06980 - - 0.00000000000000000000000000000000000000000000000000000000000000000001044 241.0
DYD3_k127_4049125_5 N-acetyltransferase - - - 0.00000000002169 72.0
DYD3_k127_4052955_0 Belongs to the N(4) N(6)-methyltransferase family K13581 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008857 546.0
DYD3_k127_4052955_1 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003783 267.0
DYD3_k127_4052955_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000001575 220.0
DYD3_k127_4052955_3 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.00000003595 56.0
DYD3_k127_4056772_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 2.247e-210 661.0
DYD3_k127_4056772_1 Magnesium transport protein CorA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006243 608.0
DYD3_k127_4056772_2 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 599.0
DYD3_k127_4056772_3 CorA-like Mg2+ transporter protein K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005011 474.0
DYD3_k127_4056772_4 Aldose 1-epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 320.0
DYD3_k127_4056772_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000648 302.0
DYD3_k127_4056772_6 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000019 285.0
DYD3_k127_4056772_7 QueF-like protein K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000484 257.0
DYD3_k127_4056772_8 - - - - 0.000000000000000000000006282 102.0
DYD3_k127_4056772_9 Type III secretion system lipoprotein chaperone (YscW) K09914 - - 0.0000000000004046 78.0
DYD3_k127_4058577_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2146.0
DYD3_k127_4058577_1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00266 - 1.4.1.13,1.4.1.14 8.756e-239 745.0
DYD3_k127_4058577_10 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase - - - 0.000000000000000000000000000000000000000000000000000000000006767 214.0
DYD3_k127_4058577_11 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000003034 192.0
DYD3_k127_4058577_12 transcriptional regulator - - - 0.00000000000000000000000000000000000004597 145.0
DYD3_k127_4058577_13 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000000000000000000000000003288 144.0
DYD3_k127_4058577_14 OstA-like protein K09774 - - 0.00000000000000000000000000000002863 133.0
DYD3_k127_4058577_15 Protein conserved in bacteria K11719 - - 0.000000000000000002838 93.0
DYD3_k127_4058577_2 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003960,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016651,GO:0016655,GO:0017091,GO:0033554,GO:0034599,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097159,GO:1901363 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009303 453.0
DYD3_k127_4058577_3 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 393.0
DYD3_k127_4058577_4 ABC transporter, ATP-binding protein K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005434 390.0
DYD3_k127_4058577_5 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 377.0
DYD3_k127_4058577_6 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008699 342.0
DYD3_k127_4058577_7 3-5 exonuclease K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 324.0
DYD3_k127_4058577_8 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007423 329.0
DYD3_k127_4058577_9 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.0000000000000000000000000000000000000000000000000000000000000003526 224.0
DYD3_k127_4098844_0 belongs to the aldehyde dehydrogenase family K09472,K12254 - 1.2.1.54,1.2.1.99 7.034e-245 764.0
DYD3_k127_4098844_1 Phytoene dehydrogenase - - - 4.961e-240 752.0
DYD3_k127_4098844_10 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002672 246.0
DYD3_k127_4098844_11 transcriptional regulator K02167 - - 0.0000000000000000000000000000000000000697 151.0
DYD3_k127_4098844_12 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.000000000000000000000000000000007405 132.0
DYD3_k127_4098844_2 AMP-binding enzyme K02182 - 6.2.1.48 2.674e-227 715.0
DYD3_k127_4098844_3 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 607.0
DYD3_k127_4098844_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 586.0
DYD3_k127_4098844_5 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 549.0
DYD3_k127_4098844_6 PFAM amidohydrolase 2 K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 441.0
DYD3_k127_4098844_7 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 430.0
DYD3_k127_4098844_8 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007318 309.0
DYD3_k127_4098844_9 Domain of unknown function (DUF1989) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 296.0
DYD3_k127_4101746_0 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 610.0
DYD3_k127_4101746_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 422.0
DYD3_k127_4101746_2 PFAM ATP-binding region ATPase domain protein K02484,K07640 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 394.0
DYD3_k127_4101746_3 MacB-like periplasmic core domain K05685 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 343.0
DYD3_k127_4101746_4 response regulator, receiver K02483,K07662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 306.0
DYD3_k127_4101746_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 GO:0003674,GO:0003824,GO:0004462,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016846,GO:0034641,GO:0043603,GO:0044237,GO:0051186,GO:0071704,GO:1901564 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000000001098 232.0
DYD3_k127_411177_0 AMP-binding enzyme C-terminal domain K00666 - - 1.085e-217 687.0
DYD3_k127_411177_1 GSCFA domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 306.0
DYD3_k127_411177_2 Amino-transferase class IV K00826,K02619 - 2.6.1.42,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000001005 220.0
DYD3_k127_411177_3 GSCFA family - - - 0.0000000000000000000000000000000000000000000000000001215 200.0
DYD3_k127_411177_4 - - - - 0.0000000000000001257 88.0
DYD3_k127_411177_5 Divergent 4Fe-4S mono-cluster K05337 - - 0.00000000000001905 74.0
DYD3_k127_4141691_0 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 439.0
DYD3_k127_4141691_1 Flagellar basal body rod FlgEFG protein C-terminal K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 364.0
DYD3_k127_4141691_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006323 282.0
DYD3_k127_4141691_3 Belongs to the flagella basal body rod proteins family K02391 - - 0.000000000000000000000000000000000000000000000000000000000000001878 228.0
DYD3_k127_4141691_4 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.00000000000000000000000000000000000000000000000000000000003955 208.0
DYD3_k127_4141691_5 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.0000000000000000000000000000000000000009207 156.0
DYD3_k127_4141691_6 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.000000000000000000462 94.0
DYD3_k127_4161001_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 407.0
DYD3_k127_4161001_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 367.0
DYD3_k127_4161001_2 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003844 237.0
DYD3_k127_4161001_3 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000006361 193.0
DYD3_k127_4161001_4 integral membrane protein K02221 - - 0.000000000000000000000000000117 119.0
DYD3_k127_4161001_5 Belongs to the UPF0235 family K09131 - - 0.000000000000000000002802 98.0
DYD3_k127_4174180_0 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000004348 211.0
DYD3_k127_4174180_1 AzlC protein - - - 0.0000000000000000000000000000000000000000000000002813 185.0
DYD3_k127_4174180_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000000000000000000001375 123.0
DYD3_k127_4174180_3 Branched-chain amino acid transport protein (AzlD) - - - 0.0000003906 55.0
DYD3_k127_419329_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 594.0
DYD3_k127_419329_1 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005885 324.0
DYD3_k127_419329_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002447 285.0
DYD3_k127_4208378_0 AMP-binding enzyme C-terminal domain - - - 3.887e-245 769.0
DYD3_k127_4208378_1 N-terminal domain of oxidoreductase K07119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 524.0
DYD3_k127_4208378_2 Protein of unknown function (DUF1298) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 427.0
DYD3_k127_4208378_3 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000001871 194.0
DYD3_k127_4208378_4 PRC-barrel domain - - - 0.0000000000000000000000000000000000000000000001118 171.0
DYD3_k127_4215314_0 Autotransporter beta-domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009526 398.0
DYD3_k127_4215314_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 323.0
DYD3_k127_4215314_2 Putative S-adenosyl-L-methionine-dependent methyltransferase K00574,K18164 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006825 289.0
DYD3_k127_4215314_3 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005988 243.0
DYD3_k127_4215314_4 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000007658 160.0
DYD3_k127_4215314_5 Membrane fusogenic activity K09806 - - 0.0000000000000000002291 92.0
DYD3_k127_4215521_0 4-hydroxyphenylacetate 3-hydroxylase C terminal K00483 - 1.14.14.9 2.803e-290 895.0
DYD3_k127_4215521_1 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006056 458.0
DYD3_k127_4215521_10 Transcriptional regulator K03719 - - 0.000000000000000000000000000000000000007134 162.0
DYD3_k127_4215521_11 - - - - 0.00000000000000000000000000000006671 127.0
DYD3_k127_4215521_12 Immunity protein 26 - - - 0.00000000007154 69.0
DYD3_k127_4215521_2 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 439.0
DYD3_k127_4215521_3 NADH:flavin oxidoreductase / NADH oxidase family K00317 - 1.5.8.1,1.5.8.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005321 357.0
DYD3_k127_4215521_4 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002596 277.0
DYD3_k127_4215521_5 Family of unknown function (DUF1028) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004224 278.0
DYD3_k127_4215521_6 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000819 276.0
DYD3_k127_4215521_7 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000000000000000000004381 246.0
DYD3_k127_4215521_8 PIN domain K07062 - - 0.00000000000000000000000000000000000000000000000000000000004266 207.0
DYD3_k127_4215521_9 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000000000000000000000000000000827 189.0
DYD3_k127_423623_0 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002023 286.0
DYD3_k127_423623_1 Metal-dependent hydrolase K07044 - - 0.0000000000000000000000000000000000000000000000000000000007809 214.0
DYD3_k127_423623_2 Immunity protein 53 - - - 0.00000000000000000000000001814 114.0
DYD3_k127_423623_3 Transcriptional regulator - - - 0.00000000000000003737 90.0
DYD3_k127_423623_4 CobW/HypB/UreG, nucleotide-binding domain K03189 - - 0.0000000000000007169 78.0
DYD3_k127_4238809_0 acetyl-coa acetyltransferase K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 444.0
DYD3_k127_4238809_1 Long-chain specific acyl-CoA dehydrogenase K15389 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 402.0
DYD3_k127_4238809_2 Hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001251 267.0
DYD3_k127_4238809_3 N-terminal half of MaoC dehydratase - - - 0.0000000000000000000000000000000000000000000004454 168.0
DYD3_k127_4238809_4 - - - - 0.0000000000000002587 88.0
DYD3_k127_4238809_5 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000001597 78.0
DYD3_k127_4238809_6 - - - - 0.000000000006056 74.0
DYD3_k127_4243132_0 MMPL family K07003 - - 0.0 1114.0
DYD3_k127_4243132_1 Protein of unknown function (DUF1329) - - - 6.939e-243 756.0
DYD3_k127_4243132_2 Tfp pilus assembly protein tip-associated adhesin - - - 5.197e-195 625.0
DYD3_k127_4243132_3 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001279 250.0
DYD3_k127_4269929_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 3.361e-247 781.0
DYD3_k127_4269929_1 Acetyl-CoA dehydrogenase C-terminal like - - - 1.186e-216 687.0
DYD3_k127_4269929_2 ABC-type polar amino acid transport system, ATPase component K02028,K02029,K09972 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 412.0
DYD3_k127_4269929_3 belongs to the bacterial solute-binding protein 3 family K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 309.0
DYD3_k127_4269929_4 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002348 268.0
DYD3_k127_4269929_5 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000004826 207.0
DYD3_k127_4274758_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 4.269e-249 796.0
DYD3_k127_4274758_1 MlrC C-terminus - - - 1.018e-194 619.0
DYD3_k127_4274758_2 Aldo keto reductase - GO:0003674,GO:0003824,GO:0004033,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016491,GO:0016614,GO:0016616,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034198,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0071496,GO:1990928 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 462.0
DYD3_k127_4274758_3 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 437.0
DYD3_k127_4274758_4 Carboxylesterase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 336.0
DYD3_k127_4274758_5 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 307.0
DYD3_k127_4274758_6 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001102 276.0
DYD3_k127_4274758_7 Belongs to the BI1 family K06890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002298 258.0
DYD3_k127_4274758_8 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000358 226.0
DYD3_k127_4274758_9 Tetracyclin repressor, C-terminal all-alpha domain - - - 0.000000000000000000000000000000000000000000000000000000005111 206.0
DYD3_k127_4293852_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 517.0
DYD3_k127_4293852_1 TIGRFAM TIGR03032 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 482.0
DYD3_k127_4293852_2 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009595 434.0
DYD3_k127_4293852_3 Transcriptional regulator - - - 0.0000002376 61.0
DYD3_k127_4293852_4 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0001952 50.0
DYD3_k127_4293852_5 Mortierella verticillata NRRL 6337 - - - 0.0002712 53.0
DYD3_k127_4305670_0 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 463.0
DYD3_k127_4305670_1 chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000001149 215.0
DYD3_k127_4305670_2 Domain of unknown function (DUF3382) K01998 - - 0.00001093 54.0
DYD3_k127_4309871_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0 1076.0
DYD3_k127_4309871_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 419.0
DYD3_k127_4327370_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 1.5e-225 715.0
DYD3_k127_4327370_1 Ammonium Transporter K03320 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008519,GO:0015075,GO:0015291,GO:0015292,GO:0015669,GO:0015670,GO:0015696,GO:0015893,GO:0016020,GO:0016021,GO:0019755,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072488,GO:0098655 - 3.434e-221 700.0
DYD3_k127_4327370_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005859 396.0
DYD3_k127_4327370_3 Cation efflux family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 308.0
DYD3_k127_4327370_4 at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA) K04752 - - 0.000000000000000000000000000000000000000000000000001475 185.0
DYD3_k127_4327370_5 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000191 189.0
DYD3_k127_4327370_6 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000001869 69.0
DYD3_k127_4327370_7 - - - - 0.000005221 56.0
DYD3_k127_4330588_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 512.0
DYD3_k127_4330588_1 Flotillin K07192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 462.0
DYD3_k127_4330588_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004192 338.0
DYD3_k127_4330588_3 Peptidase C13 family - - - 0.0000000000000000000000000000000000000000000000000000000000001958 221.0
DYD3_k127_4330588_4 Protein of unknown function (DUF1449) - - - 0.000000000000000000000000000000004699 142.0
DYD3_k127_4336653_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1210.0
DYD3_k127_4336653_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005673 574.0
DYD3_k127_4336653_2 His Kinase A (phosphoacceptor) domain K13587 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 535.0
DYD3_k127_4336653_3 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 345.0
DYD3_k127_4336653_4 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 314.0
DYD3_k127_4336653_5 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000000000000000000001256 198.0
DYD3_k127_4336653_6 Role in flagellar biosynthesis K02421 - - 0.0000000000000000000000000000000000000000000000000000612 195.0
DYD3_k127_4336653_7 Role in flagellar biosynthesis K02420 - - 0.00000000000000000000176 96.0
DYD3_k127_4336653_8 ethanolamine catabolic process K04030 - - 0.00000000000000000001761 95.0
DYD3_k127_4336653_9 Flagellar hook-basal body K02408 - - 0.0000000000009565 69.0
DYD3_k127_433666_0 DNA polymerase K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 619.0
DYD3_k127_433666_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 412.0
DYD3_k127_433666_10 Restriction endonuclease K07448 - - 0.0007563 48.0
DYD3_k127_433666_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000716 401.0
DYD3_k127_433666_3 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000102 259.0
DYD3_k127_433666_4 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000002584 234.0
DYD3_k127_433666_5 Hemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000001071 238.0
DYD3_k127_433666_6 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000002631 220.0
DYD3_k127_433666_7 Protein of unknown function (DUF1778) - - - 0.00000000000000000000000000000000002203 136.0
DYD3_k127_433666_8 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH K07746 - - 0.0000000000000000000123 94.0
DYD3_k127_433666_9 Plasmid stabilization system - - - 0.000007225 49.0
DYD3_k127_4347897_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 9.087e-292 906.0
DYD3_k127_4347897_1 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 477.0
DYD3_k127_4347897_2 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 449.0
DYD3_k127_4347897_3 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000002666 198.0
DYD3_k127_4347897_4 Protease prsW family - - - 0.000000000000000000000000000000000000000000008231 173.0
DYD3_k127_4347897_5 COG1961 Site-specific recombinases, DNA invertase Pin homologs K06400 - - 0.000001425 57.0
DYD3_k127_4351798_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K01847 - 5.4.99.2 1.693e-265 825.0
DYD3_k127_4351798_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 312.0
DYD3_k127_4351798_2 - - - - 0.0004181 48.0
DYD3_k127_4363317_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0042802,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 2.448e-280 867.0
DYD3_k127_4363317_1 Fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 446.0
DYD3_k127_4363317_2 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0042802,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007411 397.0
DYD3_k127_4363317_3 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 400.0
DYD3_k127_4363317_4 Xylose isomerase domain protein TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 397.0
DYD3_k127_4363317_5 Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system K15555 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 316.0
DYD3_k127_4363317_6 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000008956 130.0
DYD3_k127_4363317_7 PFAM thioesterase superfamily - - - 0.0000000000000000000008126 105.0
DYD3_k127_4363317_8 HAD-superfamily hydrolase subfamily IA, variant K01091 - 3.1.3.18 0.000000000000000002048 86.0
DYD3_k127_4375122_0 FAD dependent oxidoreductase central domain K19191 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006520,GO:0006575,GO:0006576,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008480,GO:0009056,GO:0009063,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016491,GO:0016645,GO:0019695,GO:0019752,GO:0019842,GO:0031406,GO:0031974,GO:0033218,GO:0034641,GO:0035999,GO:0036094,GO:0042133,GO:0042135,GO:0042219,GO:0042402,GO:0042426,GO:0042558,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046483,GO:0046653,GO:0046997,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0072341,GO:0097159,GO:0097164,GO:1901052,GO:1901053,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.5.3.19 0.0 1319.0
DYD3_k127_4375122_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.106e-254 798.0
DYD3_k127_4375122_10 - - - - 0.0000001126 64.0
DYD3_k127_4375122_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 450.0
DYD3_k127_4375122_3 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 428.0
DYD3_k127_4375122_4 Choline/ethanolamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 405.0
DYD3_k127_4375122_5 PFAM Enoyl-CoA hydratase isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 327.0
DYD3_k127_4375122_6 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000001668 233.0
DYD3_k127_4375122_7 growth inhibitor K07171 - - 0.0000000000000000000000000000000000000000002689 160.0
DYD3_k127_4375122_8 Protein of unknown function (DUF3018) - - - 0.0000000000000000003271 89.0
DYD3_k127_4375122_9 PFAM transposase IS116 IS110 IS902 family K07486 - - 0.00000002354 55.0
DYD3_k127_4375821_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1500.0
DYD3_k127_4375821_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 587.0
DYD3_k127_4375821_10 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 333.0
DYD3_k127_4375821_2 4Fe-4S dicluster domain K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006268 548.0
DYD3_k127_4375821_3 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 540.0
DYD3_k127_4375821_4 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 519.0
DYD3_k127_4375821_5 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 494.0
DYD3_k127_4375821_6 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 384.0
DYD3_k127_4375821_7 Prokaryotic cytochrome b561 K00127 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 379.0
DYD3_k127_4375821_8 Protein involved in formate dehydrogenase formation K02380 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 381.0
DYD3_k127_4375821_9 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 345.0
DYD3_k127_4393125_0 Flavoprotein involved in K transport K03379 - 1.14.13.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 572.0
DYD3_k127_4393125_1 FMN-dependent dehydrogenase K00101 - 1.1.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 556.0
DYD3_k127_4393125_10 Zincin-like metallopeptidase - - - 0.00000000000000000000000000000000000000003833 156.0
DYD3_k127_4393125_11 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000005192 153.0
DYD3_k127_4393125_12 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000009596 145.0
DYD3_k127_4393125_13 3-demethylubiquinone-9 3-O-methyltransferase activity K00568,K15257 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000221 118.0
DYD3_k127_4393125_2 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 542.0
DYD3_k127_4393125_3 Major Facilitator Superfamily K08224 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007139 432.0
DYD3_k127_4393125_4 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 316.0
DYD3_k127_4393125_5 dehydrogenase and related dehydrogenases K12972 - 1.1.1.79,1.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005249 301.0
DYD3_k127_4393125_6 Alpha beta hydrolase K18092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001585 277.0
DYD3_k127_4393125_7 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily K15270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004601 260.0
DYD3_k127_4393125_8 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000008487 246.0
DYD3_k127_4393125_9 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000001121 187.0
DYD3_k127_4400732_0 AMP-binding enzyme K00666 - - 1.258e-286 889.0
DYD3_k127_4400732_1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 595.0
DYD3_k127_4400732_2 COG0119 Isopropylmalate homocitrate citramalate synthases K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 329.0
DYD3_k127_4400732_3 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001743 259.0
DYD3_k127_4400732_4 Protein of unknown function (DUF2459) - - - 0.00000000000000000000000000000000000000000005063 169.0
DYD3_k127_4400732_5 Protein of unknown function (DUF1345) - - - 0.0000000000000000000000000000000000000000001449 168.0
DYD3_k127_4410138_0 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000005743 214.0
DYD3_k127_4410138_1 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000003039 121.0
DYD3_k127_4410138_2 bacterial OsmY and nodulation domain K04065 - - 0.00000000000000001277 94.0
DYD3_k127_4411606_0 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000848 597.0
DYD3_k127_4411606_1 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 509.0
DYD3_k127_4411606_2 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008383 447.0
DYD3_k127_4411606_3 Enoyl-(Acyl carrier protein) reductase - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0012505,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 294.0
DYD3_k127_4411606_4 SnoaL-like domain - - - 0.0000000000000000000000000000000000000001429 157.0
DYD3_k127_4451941_0 SIS domain K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000409 236.0
DYD3_k127_4451941_1 - K07266 - - 0.00000000000000000000000007487 125.0
DYD3_k127_4451941_2 oxidoreductase() - - - 0.0000003779 53.0
DYD3_k127_445844_0 Methane/Phenol/Toluene Hydroxylase K16242 - - 7.826e-288 890.0
DYD3_k127_445844_1 MMPL family K07003 - - 3.295e-255 795.0
DYD3_k127_445844_10 Rieske [2Fe-2S] domain K03862,K18068 - 1.14.12.7,1.14.13.82 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005634 351.0
DYD3_k127_445844_11 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005786 319.0
DYD3_k127_445844_12 MmoB/DmpM family K16244 - - 0.0000000000000000000000000000000002519 133.0
DYD3_k127_445844_13 protein, 4-oxalocrotonate tautomerase homolog K01821 - 5.3.2.6 0.00000000000000000000000000000001076 131.0
DYD3_k127_445844_14 Haem-degrading - - - 0.00000000000000000000000000000001807 137.0
DYD3_k127_445844_15 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000001827 104.0
DYD3_k127_445844_16 Phenol hydroxylase subunit K16249 - - 0.0000000000000000001287 91.0
DYD3_k127_445844_17 Phenol hydroxylase conserved region K16245 - - 0.0000000000000004199 79.0
DYD3_k127_445844_18 Tautomerase enzyme - - - 0.00000000000005541 75.0
DYD3_k127_445844_2 Belongs to the aldehyde dehydrogenase family K00130,K00151,K10217 GO:0003674,GO:0003824,GO:0004029,GO:0008150,GO:0008152,GO:0008802,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.32,1.2.1.60,1.2.1.8,1.2.1.85 9.232e-255 801.0
DYD3_k127_445844_3 Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds K01666 - 4.1.3.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008341 563.0
DYD3_k127_445844_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K00446 - 1.13.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 538.0
DYD3_k127_445844_5 Rieske [2Fe-2S] domain K22325 - 1.14.15.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 514.0
DYD3_k127_445844_6 Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD( ) and coenzyme A. Is the final enzyme in the meta- cleavage pathway for the degradation of aromatic compounds K18366 - 1.2.1.10,1.2.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006304 504.0
DYD3_k127_445844_7 Methane/Phenol/Toluene Hydroxylase K16243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 456.0
DYD3_k127_445844_8 hydratase K18364 - 4.2.1.132,4.2.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008875 421.0
DYD3_k127_445844_9 4-Oxalocrotonate decarboxylase K01617 - 4.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 355.0
DYD3_k127_4475375_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 347.0
DYD3_k127_4475375_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 316.0
DYD3_k127_4475375_2 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007352 269.0
DYD3_k127_4475375_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000002059 263.0
DYD3_k127_4475375_4 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000007382 197.0
DYD3_k127_4514136_0 ATP-binding protein' K06915 - - 7.734e-223 703.0
DYD3_k127_4514136_1 aldo keto reductase K05275 - 1.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004914 484.0
DYD3_k127_4514136_2 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002734 234.0
DYD3_k127_4514136_3 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000006133 207.0
DYD3_k127_4514136_4 PFAM regulatory protein TetR - - - 0.000000000000000000000000003896 113.0
DYD3_k127_4514136_5 Papain-like cysteine protease AvrRpt2 - - - 0.00000000000000000000004235 113.0
DYD3_k127_4514136_6 PFAM Outer membrane efflux protein - - - 0.000000000000000000012 96.0
DYD3_k127_4516918_0 Belongs to the peptidase S16 family - - - 4.356e-257 809.0
DYD3_k127_4516918_1 DNA polymerase beta thumb K02347 - - 2.128e-214 680.0
DYD3_k127_4516918_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000001091 196.0
DYD3_k127_4522455_0 Predicted membrane protein (DUF2339) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007229 599.0
DYD3_k127_4522455_1 Prolyl 4-hydroxylase alpha subunit homologues. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 504.0
DYD3_k127_4522455_2 PFAM transposase IS116 IS110 IS902 family K07486 - - 0.000000151 52.0
DYD3_k127_4533456_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008936 515.0
DYD3_k127_4533456_1 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007653 497.0
DYD3_k127_4533456_10 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 383.0
DYD3_k127_4533456_11 PFAM Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009334 345.0
DYD3_k127_4533456_12 PFAM cytochrome c biogenesis protein transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006397 306.0
DYD3_k127_4533456_13 Flavodoxin-like fold K00355 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009216 306.0
DYD3_k127_4533456_14 AntiSigma factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 293.0
DYD3_k127_4533456_15 Bacterial regulatory proteins, tetR family K16137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009845 252.0
DYD3_k127_4533456_16 Tautomerase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001191 243.0
DYD3_k127_4533456_17 PFAM AhpC TSA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005047 245.0
DYD3_k127_4533456_18 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000000000000000000000000007718 215.0
DYD3_k127_4533456_19 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000001292 214.0
DYD3_k127_4533456_2 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 486.0
DYD3_k127_4533456_20 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000002732 190.0
DYD3_k127_4533456_21 Thioredoxin - - - 0.00000000000000000000000000000002132 133.0
DYD3_k127_4533456_22 Cupredoxin-like domain - - - 0.00000000000000000000000001428 114.0
DYD3_k127_4533456_23 - - - - 0.0000000000001477 76.0
DYD3_k127_4533456_24 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.0000000002753 61.0
DYD3_k127_4533456_25 Evidence Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K12262 - - 0.000000006529 63.0
DYD3_k127_4533456_3 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 478.0
DYD3_k127_4533456_4 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 479.0
DYD3_k127_4533456_5 Belongs to the GST superfamily K11209 GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0015036,GO:0016491,GO:0016667,GO:0050896,GO:0055114 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 419.0
DYD3_k127_4533456_6 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 396.0
DYD3_k127_4533456_7 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003034 387.0
DYD3_k127_4533456_8 KR domain K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005028 383.0
DYD3_k127_4533456_9 PFAM Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 382.0
DYD3_k127_4542846_0 Flavin-binding monooxygenase-like - - - 2.692e-228 720.0
DYD3_k127_4542846_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000574 490.0
DYD3_k127_4542846_10 Transcriptional regulator - - - 0.0000003718 58.0
DYD3_k127_4542846_11 Transcriptional regulator - - - 0.00000918 54.0
DYD3_k127_4542846_2 Domain of unknown function (DUF4173) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 396.0
DYD3_k127_4542846_3 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 365.0
DYD3_k127_4542846_4 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007218 339.0
DYD3_k127_4542846_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 332.0
DYD3_k127_4542846_6 Protein of unknown function (DUF938) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003304 279.0
DYD3_k127_4542846_7 May be involved in the biosynthesis of molybdopterin K03638 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0042802,GO:0044424,GO:0044444,GO:0044464 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000008085 262.0
DYD3_k127_4542846_8 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000008807 192.0
DYD3_k127_4542846_9 HAMP domain - - - 0.0000000000000000003847 98.0
DYD3_k127_4560181_0 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 - 2.3.3.9 0.0 1037.0
DYD3_k127_4560181_1 Haem-degrading K11477 - - 0.000000000000000000000000000000000000000000000000002785 186.0
DYD3_k127_4560181_2 Thioesterase superfamily K10806 - - 0.000000000000000006038 85.0
DYD3_k127_4565863_0 Extracellular solute-binding protein K02055 GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008152,GO:0009058,GO:0009290,GO:0009292,GO:0009294,GO:0009987,GO:0015931,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042618,GO:0042619,GO:0044464,GO:0044764,GO:0050657,GO:0051027,GO:0051179,GO:0051234,GO:0051704,GO:0071702,GO:0071704,GO:0071705,GO:0098657,GO:1901440,GO:1901441,GO:1901576 - 4.225e-200 642.0
DYD3_k127_4565863_1 TOBE domain K02052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 424.0
DYD3_k127_4565863_2 4Fe-4S single cluster domain K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 392.0
DYD3_k127_4565863_3 methyl-accepting chemotaxis K03406 - - 0.00000000000000000000000000000000002687 137.0
DYD3_k127_4572235_0 acyl-CoA dehydrogenase - - - 9.05e-199 625.0
DYD3_k127_4572235_1 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 608.0
DYD3_k127_4572235_2 short chain dehydrogenase reductase family K18009 - 1.1.1.304,1.1.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000009049 253.0
DYD3_k127_4572235_3 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000547 208.0
DYD3_k127_4572235_4 Carotenoid biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000006624 213.0
DYD3_k127_4572235_5 mercury ion transmembrane transporter activity K07213 - - 0.0000000007582 64.0
DYD3_k127_4578591_0 phosphate acetyltransferase K00625,K00634 - 2.3.1.19,2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 497.0
DYD3_k127_4578591_1 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 355.0
DYD3_k127_4578591_2 -acetyltransferase - - - 0.00000000000000000000000000000000000000000000004317 172.0
DYD3_k127_4578591_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000009204 116.0
DYD3_k127_4601076_0 Aminotransferase K14261 - - 7.94e-205 644.0
DYD3_k127_4601076_1 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008615 515.0
DYD3_k127_4601076_2 HI0933-like protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006577 490.0
DYD3_k127_4601076_3 in Escherichia coli this protein forms a dimer and binds manganese K11532 - 3.1.3.11,3.1.3.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 452.0
DYD3_k127_4601076_4 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001763 294.0
DYD3_k127_4601076_5 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000004977 210.0
DYD3_k127_4601076_6 Flp pilus assembly protein, pilin Flp K02651 - - 0.00000004705 55.0
DYD3_k127_4601076_7 OmpA family - - - 0.0001136 53.0
DYD3_k127_4602761_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01908 - 6.2.1.17 3.031e-303 942.0
DYD3_k127_4602761_1 AMP-binding enzyme C-terminal domain K00666,K02182,K20034 - 6.2.1.44,6.2.1.48 3.86e-208 656.0
DYD3_k127_4602761_2 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008356 411.0
DYD3_k127_4602761_3 Integral membrane protein TerC family - - - 0.00000000000000000000000000000000000000000000000000000000000000003397 229.0
DYD3_k127_4605618_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0 1034.0
DYD3_k127_4605618_1 monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000852 584.0
DYD3_k127_4605618_2 L-carnitine dehydratase bile acid-inducible protein F K18702 - 2.8.3.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 558.0
DYD3_k127_4605618_3 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 545.0
DYD3_k127_4605618_4 COG0747 ABC-type dipeptide transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006736 551.0
DYD3_k127_4605618_5 N-formylglutamate amidohydrolase K01479 - 3.5.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 381.0
DYD3_k127_4605618_6 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000004431 200.0
DYD3_k127_4605618_7 protein conserved in bacteria K09975 - - 0.0000000000000000000000000000005739 130.0
DYD3_k127_460596_0 Crp-like helix-turn-helix domain K10914 - - 0.000000000000000000000000000000000000000000000000000002157 200.0
DYD3_k127_460596_1 ABC-type multidrug transport system ATPase and permease K06147,K11085 - - 0.0000000000000000000000000000000000002396 162.0
DYD3_k127_460596_2 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000000000000000001164 142.0
DYD3_k127_460596_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000008985 56.0
DYD3_k127_4675398_0 malic enzyme K00029 - 1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 594.0
DYD3_k127_4675398_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 520.0
DYD3_k127_4675398_2 signal transduction histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 366.0
DYD3_k127_4685527_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.1.2.1 6.064e-215 675.0
DYD3_k127_4685527_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 462.0
DYD3_k127_4685527_2 Riboflavin synthase alpha chain K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000323 251.0
DYD3_k127_4685527_3 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000000000003044 251.0
DYD3_k127_4685527_4 COG0698 Ribose 5-phosphate isomerase RpiB K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000003289 206.0
DYD3_k127_4685527_5 PFAM transposase IS116 IS110 IS902 family K07486 - - 0.0000000000000000004338 87.0
DYD3_k127_4688181_0 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 593.0
DYD3_k127_4688181_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000173 200.0
DYD3_k127_4688181_3 - - - - 0.0000000008645 67.0
DYD3_k127_4692929_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 2.498e-237 750.0
DYD3_k127_4692929_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 3.921e-201 632.0
DYD3_k127_4692929_10 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.0000000000000000000000000000000000000001672 157.0
DYD3_k127_4692929_11 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway K03707 - 3.5.99.2 0.00000000000000000000000000000000008183 139.0
DYD3_k127_4692929_12 protein conserved in bacteria - - - 0.000000000000000000000000000001244 121.0
DYD3_k127_4692929_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 417.0
DYD3_k127_4692929_3 COG1104 Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 386.0
DYD3_k127_4692929_4 hydrolase of the alpha beta superfamily K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008127 323.0
DYD3_k127_4692929_5 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 303.0
DYD3_k127_4692929_6 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.00000000000000000000000000000000000000000000000000000000000000000000339 235.0
DYD3_k127_4692929_7 transcriptional regulator K13643 - - 0.000000000000000000000000000000000000000000000000000000000000000003101 229.0
DYD3_k127_4692929_8 Ferredoxin K04755 - - 0.0000000000000000000000000000000000000000000000000129 184.0
DYD3_k127_4692929_9 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000000000177 179.0
DYD3_k127_4734379_0 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 7.724e-197 623.0
DYD3_k127_4734379_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 535.0
DYD3_k127_4734379_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004376 340.0
DYD3_k127_4734379_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 347.0
DYD3_k127_4734379_4 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006456 284.0
DYD3_k127_4734379_5 Capsule polysaccharide biosynthesis protein K07266 - - 0.00000000000000000000000000000000000000000002134 175.0
DYD3_k127_4736138_0 phospholipase C K01114 - 3.1.4.3 3.798e-286 898.0
DYD3_k127_4736138_1 Penicillin-binding protein 2 K05515 - 3.4.16.4 8.749e-222 713.0
DYD3_k127_4736138_10 Protein of unknown function (DUF3445) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 288.0
DYD3_k127_4736138_11 Nodulation protein S (NodS) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006811 246.0
DYD3_k127_4736138_12 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000001639 244.0
DYD3_k127_4736138_13 Penicillin-insensitive murein endopeptidase K07261 - - 0.00000000000000000000000000000000000000000000000000000000000000000004681 241.0
DYD3_k127_4736138_14 iron-storage protein K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000000007567 220.0
DYD3_k127_4736138_15 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000000000000000000001443 211.0
DYD3_k127_4736138_16 Protein of unknown function (DUF1214) - - - 0.0000000000000000000000000000000000000000002645 166.0
DYD3_k127_4736138_17 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000000000001527 164.0
DYD3_k127_4736138_18 phospholipase Carboxylesterase - - - 0.0000000000000000000000000005026 125.0
DYD3_k127_4736138_19 integral membrane protein - - - 0.00000000000000000000001173 113.0
DYD3_k127_4736138_2 Rod shape-determining protein MreB K03569 - - 2.462e-196 615.0
DYD3_k127_4736138_20 shape-determining protein K03571 - - 0.00000000000000000000005749 113.0
DYD3_k127_4736138_21 - - - - 0.0000000000000000000002948 111.0
DYD3_k127_4736138_22 BFD-like [2Fe-2S] binding domain K02192 - - 0.000000009758 59.0
DYD3_k127_4736138_3 sulfate ABC transporter K02048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004892 503.0
DYD3_k127_4736138_4 Iron-containing alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 501.0
DYD3_k127_4736138_5 ABC-type sulfate transport system, permease component K02047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 427.0
DYD3_k127_4736138_6 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 409.0
DYD3_k127_4736138_7 Domain of unknown function (DUF1794) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 401.0
DYD3_k127_4736138_8 sulfate transport system, permease K02046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005743 377.0
DYD3_k127_4736138_9 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 317.0
DYD3_k127_4756291_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 2.897e-270 840.0
DYD3_k127_4756291_1 Fumarase C C-terminus K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 582.0
DYD3_k127_4756291_2 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 377.0
DYD3_k127_4756291_3 protein involved in outer membrane biogenesis - - - 0.000000000000000000000006454 118.0
DYD3_k127_4756291_4 Ribbon-helix-helix domain - - - 0.000000000000000001156 90.0
DYD3_k127_4756291_5 - - - - 0.00000000000000003051 96.0
DYD3_k127_4756291_6 - - - - 0.00000000000000009383 94.0
DYD3_k127_4756291_7 Stringent starvation protein B K09985 - - 0.00000000000001522 76.0
DYD3_k127_4764324_0 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007763 467.0
DYD3_k127_4764324_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367 319.0
DYD3_k127_4764324_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000001727 221.0
DYD3_k127_4789853_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 1.753e-314 975.0
DYD3_k127_4789853_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 - 3.6.3.12 4.88e-262 818.0
DYD3_k127_4789853_2 Histidine kinase K07646 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009263 490.0
DYD3_k127_4789853_3 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.000000000000000000000000000000000000000000000000000000000000000002232 231.0
DYD3_k127_4789922_0 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 403.0
DYD3_k127_4789922_1 UTRA K05836 - - 0.000000000000000000000000000000000000000000000000000000005023 207.0
DYD3_k127_4789922_2 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000003396 142.0
DYD3_k127_4814766_0 Protein of unknown function (DUF1302) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 415.0
DYD3_k127_4814766_1 AraC-binding-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 334.0
DYD3_k127_4814766_2 Saccharopine dehydrogenase - - - 0.000000000000000000005211 95.0
DYD3_k127_4814766_3 - - - - 0.000000000000121 76.0
DYD3_k127_4814766_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000002623 55.0
DYD3_k127_4814766_5 TonB C terminal K03832 - - 0.0007654 48.0
DYD3_k127_4820578_0 Urease alpha-subunit, N-terminal domain K01428 - 3.5.1.5 6.296e-314 965.0
DYD3_k127_4820578_1 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 340.0
DYD3_k127_4820578_2 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.0000000000000000000000000000000000000000000000000000000000003823 222.0
DYD3_k127_4820578_3 Dihydroxyacetone kinase K00863 - 2.7.1.28,2.7.1.29,4.6.1.15 0.000000003612 61.0
DYD3_k127_4841543_0 Chromosome Partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 357.0
DYD3_k127_4841543_1 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 307.0
DYD3_k127_4841543_2 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000002962 120.0
DYD3_k127_4843423_0 Glutathione S-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 306.0
DYD3_k127_4843423_1 Glutathione S-transferase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006251 264.0
DYD3_k127_4843423_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000001051 230.0
DYD3_k127_4845808_0 III protein, CoA-transferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 551.0
DYD3_k127_4845808_1 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 315.0
DYD3_k127_4845808_2 2-hydroxychromene-2-carboxylate isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003172 255.0
DYD3_k127_4845808_3 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000004156 151.0
DYD3_k127_4845808_4 Uracil-DNA glycosylase - - - 0.000000000000000000000000000006214 120.0
DYD3_k127_4845808_5 Region found in RelA / SpoT proteins K00951,K01139 - 2.7.6.5,3.1.7.2 0.00000000000193 75.0
DYD3_k127_4845808_7 Putative transposase of IS4/5 family (DUF4096) - - - 0.0000002327 52.0
DYD3_k127_4868453_0 MreB/Mbl protein K04043 - - 1.2e-322 998.0
DYD3_k127_4868453_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 567.0
DYD3_k127_4868453_2 methyl-accepting chemotaxis K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007708 335.0
DYD3_k127_4868453_3 Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002008 236.0
DYD3_k127_4868453_4 Copper chaperone PCu(A)C K09796 - - 0.0000000000000000000000000000000000000000000001966 175.0
DYD3_k127_4868453_5 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000006802 138.0
DYD3_k127_4868453_6 Histidine kinase - - - 0.000000004155 62.0
DYD3_k127_4868453_7 PepSY-associated TM region - - - 0.00000007278 55.0
DYD3_k127_4886519_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 4.546e-292 908.0
DYD3_k127_4886519_1 ABC-type multidrug transport system, ATPase and permease K06147 - - 1.002e-216 688.0
DYD3_k127_4886519_2 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 289.0
DYD3_k127_4886519_3 Arylesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004561 268.0
DYD3_k127_4886519_4 Glycosyl transferase family 2 - - - 0.00000000000000000000002128 101.0
DYD3_k127_4886519_5 Domain of unknown function (DUF4442) - - - 0.0000000000000000008032 94.0
DYD3_k127_4886519_6 Belongs to the frataxin family K19054 - 1.16.3.1 0.00000000000008652 78.0
DYD3_k127_4886724_0 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 387.0
DYD3_k127_4886724_1 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 336.0
DYD3_k127_4886724_2 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000004518 170.0
DYD3_k127_4886724_3 Transcriptional regulator K18939 - - 0.00000000000000000000004363 108.0
DYD3_k127_4886724_4 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000001475 90.0
DYD3_k127_4886724_5 Enoyl-(Acyl carrier protein) reductase - - - 0.000000002118 61.0
DYD3_k127_4886724_6 - - - - 0.0000007273 59.0
DYD3_k127_4886724_7 Entericidin EcnA/B family - - - 0.0007567 47.0
DYD3_k127_4900142_0 transport system involved in gliding motility, auxiliary component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 492.0
DYD3_k127_4900142_1 ABC transporter permease K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008515 366.0
DYD3_k127_4900142_2 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 352.0
DYD3_k127_4900142_3 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000000000000000000000000000003532 224.0
DYD3_k127_4900142_4 Protein of unknown function (DUF2794) - - - 0.00000000000000000000000000000000003626 138.0
DYD3_k127_4900142_5 Domain of unknown function (DUF4340) - - - 0.000000000000000000000000000004234 134.0
DYD3_k127_4900142_6 Transcriptional regulator, TetR family - - - 0.000213 46.0
DYD3_k127_4903115_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 589.0
DYD3_k127_4903115_1 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 349.0
DYD3_k127_4903115_2 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000001889 229.0
DYD3_k127_4903115_3 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000368 226.0
DYD3_k127_4903115_4 Uncharacterised protein family (UPF0262) - - - 0.0000000000000000000000000000000000000000000000000000000001455 209.0
DYD3_k127_4903115_5 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000000005507 141.0
DYD3_k127_4903115_6 Protein of unknown function (DUF2948) - - - 0.0000000000000000000000000004175 119.0
DYD3_k127_4903115_7 TIGRFAM ribonuclease, Rne Rng family K08301 - - 0.000000000000000000000000002408 127.0
DYD3_k127_4903115_8 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000000000000004559 90.0
DYD3_k127_4903115_9 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.0000001288 54.0
DYD3_k127_4915458_0 formate dehydrogenase K00123 - 1.17.1.9 0.0 1680.0
DYD3_k127_4915458_1 NADH ubiquinone oxidoreductase NADH-binding (51 kD) subunit K00124,K00335 - 1.6.5.3 6.303e-224 698.0
DYD3_k127_4915458_2 Aldehyde dehydrogenase family K00138 - - 9.66e-200 624.0
DYD3_k127_4915458_3 Protein of unknown function (DUF1826) - - - 0.0000000000000000000000000000000000000000000000000005956 192.0
DYD3_k127_4915458_4 NADH-dependant formate dehydrogenase delta subunit FdsD K00126 - 1.17.1.9 0.00000000000000000001824 93.0
DYD3_k127_4922732_0 Hydantoinase/oxoprolinase N-terminal region K01469 - 3.5.2.9 0.0 1088.0
DYD3_k127_4922732_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 5.964e-218 680.0
DYD3_k127_4922732_10 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000001114 218.0
DYD3_k127_4922732_11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000136 186.0
DYD3_k127_4922732_12 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 K18586 - - 0.000000000000000000000000000000000000000000000000001623 192.0
DYD3_k127_4922732_13 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000002365 178.0
DYD3_k127_4922732_14 Secreted repeat of unknown function - - - 0.000000000000000000000000000000000000000000006871 169.0
DYD3_k127_4922732_15 Putative transposase of IS4/5 family (DUF4096) K07492 - - 0.0000000000000000000000000000007996 124.0
DYD3_k127_4922732_16 Domain of unknown function (DUF305) - - - 0.000000000000000000000002177 108.0
DYD3_k127_4922732_17 Staphylococcal nuclease homologue - - - 0.0000000000007194 79.0
DYD3_k127_4922732_18 Alpha beta hydrolase - - - 0.00000002369 57.0
DYD3_k127_4922732_2 40-residue yvtn family beta-propeller repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 535.0
DYD3_k127_4922732_3 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 389.0
DYD3_k127_4922732_4 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 388.0
DYD3_k127_4922732_5 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00065 - 1.1.1.127 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 345.0
DYD3_k127_4922732_6 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 327.0
DYD3_k127_4922732_7 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 322.0
DYD3_k127_4922732_8 Phosphoglycerate mutase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005089 261.0
DYD3_k127_4922732_9 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000004272 228.0
DYD3_k127_4930347_0 Bacterial extracellular solute-binding protein K11073 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005491 425.0
DYD3_k127_4930347_1 Aminotransferase class-III K12256 - 2.6.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000006763 258.0
DYD3_k127_4930347_2 Part of the ABC transporter complex potABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0016020,GO:0016021,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000007548 220.0
DYD3_k127_4930347_3 PIN domain - - - 0.000000000000000000000000000000000000000000000000001488 186.0
DYD3_k127_4930347_4 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000000000000000000005395 114.0
DYD3_k127_4931988_0 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 4.664e-230 717.0
DYD3_k127_4931988_1 Acyl-CoA dehydrogenase, C-terminal domain K06446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005794 556.0
DYD3_k127_4931988_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 421.0
DYD3_k127_4931988_3 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 412.0
DYD3_k127_4931988_4 GSCFA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 365.0
DYD3_k127_4931988_5 Ndr family K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 343.0
DYD3_k127_4931988_6 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 317.0
DYD3_k127_4931988_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 298.0
DYD3_k127_4931988_8 UPF0126 domain - - - 0.0000000000000000000000000000000000000000000000000000000000001972 218.0
DYD3_k127_4932815_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1065.0
DYD3_k127_4932815_1 Proton-conducting membrane transporter - - - 8.863e-316 979.0
DYD3_k127_4932815_10 Domain of unknown function (DUF1476) - - - 0.00000000000000000000000000000004075 131.0
DYD3_k127_4932815_11 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000001879 123.0
DYD3_k127_4932815_12 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000004891 120.0
DYD3_k127_4932815_2 Proton-conducting membrane transporter K12141 - - 6.436e-244 770.0
DYD3_k127_4932815_3 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 455.0
DYD3_k127_4932815_4 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 470.0
DYD3_k127_4932815_5 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 377.0
DYD3_k127_4932815_6 COG4237 Hydrogenase 4 membrane component (E) K12140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 352.0
DYD3_k127_4932815_7 CobB/CobQ-like glutamine amidotransferase domain K01952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 325.0
DYD3_k127_4932815_8 Acetyltransferase K03829 - - 0.0000000000000000000000000000000000000001039 157.0
DYD3_k127_4932815_9 Belongs to the BolA IbaG family - - - 0.000000000000000000000000000000007673 128.0
DYD3_k127_4946942_0 Filamentation induced by cAMP protein fic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009179 528.0
DYD3_k127_4946942_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 393.0
DYD3_k127_4946942_2 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000932 261.0
DYD3_k127_4946942_3 Uncharacterized protein conserved in bacteria (DUF2199) - - - 0.00000000000000000000000000000000000000000000000003979 184.0
DYD3_k127_4946942_4 SpoVT / AbrB like domain - - - 0.00000000000000000000000000001767 119.0
DYD3_k127_4946942_5 - - - - 0.000000004029 64.0
DYD3_k127_4946942_6 Domain of unknown function (DUF4274) - - - 0.000004201 57.0
DYD3_k127_495351_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 1.406e-198 631.0
DYD3_k127_495351_1 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004862 362.0
DYD3_k127_495351_2 protein conserved in bacteria K09921 - - 0.00000000000000000000000000000000000000000002494 172.0
DYD3_k127_495351_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.00000000000009058 70.0
DYD3_k127_4962177_0 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005135 593.0
DYD3_k127_4962177_1 Arginase family K01480 - 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 542.0
DYD3_k127_4962177_2 CoA-transferase family III K01796 - 5.1.99.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006674 379.0
DYD3_k127_4962177_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001151 267.0
DYD3_k127_4962177_4 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002036 254.0
DYD3_k127_4962177_5 clavaminate synthase activity K00471 - 1.14.11.1 0.000000000000000000000000000000000000000000000000000001901 196.0
DYD3_k127_4962177_6 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000002269 190.0
DYD3_k127_4962177_7 uracil DNA glycosylase K03648 - 3.2.2.27 0.000000000000000000000000000000000000000000757 168.0
DYD3_k127_4962177_8 Steryl acetyl hydrolase - - - 0.000000000000000000000004443 107.0
DYD3_k127_4977824_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 589.0
DYD3_k127_4977824_1 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006219 400.0
DYD3_k127_4977824_2 RNA pseudouridylate synthase K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009703 280.0
DYD3_k127_4977824_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01485,K01487,K11991 - 3.5.4.1,3.5.4.3,3.5.4.33 0.00000000000000000000000000000000000000000000000000000000000002332 218.0
DYD3_k127_4977824_4 Protein of unknown function (DUF3108) - - - 0.000000000000000000001545 105.0
DYD3_k127_4977824_5 ParE toxin of type II toxin-antitoxin system, parDE K19092 - - 0.0000000006075 69.0
DYD3_k127_4977824_6 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000009015 61.0
DYD3_k127_4977824_7 Integrase core domain - - - 0.00000009584 54.0
DYD3_k127_4977824_8 addiction module antidote protein, CC2985 family K07746 - - 0.00004522 49.0
DYD3_k127_5014853_0 TRAP transporter, solute receptor (TAXI family K01207,K07080 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 332.0
DYD3_k127_5014853_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 305.0
DYD3_k127_5014853_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009813 297.0
DYD3_k127_5014853_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000001224 155.0
DYD3_k127_5014853_4 Domain of Unknown Function (DUF350) K08989 - - 0.000000000000000006745 89.0
DYD3_k127_5014853_5 response to cobalt ion - - - 0.0000000000005257 75.0
DYD3_k127_5016278_0 glutamine synthetase K01915 - 6.3.1.2 1.337e-235 739.0
DYD3_k127_5016278_1 Cys/Met metabolism PLP-dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 553.0
DYD3_k127_5016278_10 - - - - 0.0001668 44.0
DYD3_k127_5016278_2 isoprenylcysteine carboxyl methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 358.0
DYD3_k127_5016278_3 Belongs to the P(II) protein family K04751 GO:0003674,GO:0006808,GO:0008150,GO:0030234,GO:0050789,GO:0050790,GO:0065007,GO:0065009,GO:0098772 - 0.000000000000000000000000000000000000000000000000000000001162 204.0
DYD3_k127_5016278_4 CorA-like Mg2+ transporter protein - - - 0.00000000000000000000000000000000000000000000000000000001429 211.0
DYD3_k127_5016278_5 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.0000000000000000000000000000000000000000000000006092 191.0
DYD3_k127_5016278_6 LTXXQ motif family protein - - - 0.000000000000000000000000000000000000000000000008107 178.0
DYD3_k127_5016278_7 Phosphoglycerate mutase - - - 0.00000000000000000000000000000000000000009883 156.0
DYD3_k127_5016278_9 Transposase K07486 - - 0.000000000000239 75.0
DYD3_k127_5026159_0 ABC-2 type transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000751 299.0
DYD3_k127_5026159_1 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000001285 215.0
DYD3_k127_5026159_2 Extensin-like protein C-terminus - - - 0.00000000000000000000000000000000000000000000000000002211 196.0
DYD3_k127_5026159_3 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000002664 187.0
DYD3_k127_5026159_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000005714 180.0
DYD3_k127_5026159_5 fatty acid desaturase - - - 0.000000000000000000000000001025 124.0
DYD3_k127_5026159_6 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0005355 53.0
DYD3_k127_5069227_0 Belongs to the GcvT family K00302,K22086 - 1.5.3.1,1.5.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 532.0
DYD3_k127_5069227_1 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 463.0
DYD3_k127_5069227_2 Sarcosine oxidase, gamma subunit K00305,K22087 - 1.5.3.1,1.5.99.5 0.000000000000000000000000000000001329 138.0
DYD3_k127_5076437_0 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 2.851e-246 777.0
DYD3_k127_5076437_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 373.0
DYD3_k127_5076437_2 Ferredoxin, 2Fe-2S - - - 0.00000000000000000000000000000000000000000000001338 173.0
DYD3_k127_5076437_3 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000000000003014 139.0
DYD3_k127_5076437_4 domain, Protein - - - 0.000000000000000000022 94.0
DYD3_k127_5099139_0 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008261 456.0
DYD3_k127_5099139_1 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000002909 234.0
DYD3_k127_5104153_0 DNA polymerase K02337 - 2.7.7.7 1.138e-286 895.0
DYD3_k127_5104153_1 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000002212 148.0
DYD3_k127_5104588_0 Glycosyl transferase family group 2 - - - 2.444e-287 908.0
DYD3_k127_5104588_1 Aldehyde dehydrogenase K00135 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004777,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006105,GO:0006520,GO:0006536,GO:0006538,GO:0006540,GO:0006807,GO:0008150,GO:0008152,GO:0009013,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009448,GO:0009450,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0019752,GO:0032787,GO:0036094,GO:0042133,GO:0042135,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.2.1.16,1.2.1.20,1.2.1.79 1.185e-237 742.0
DYD3_k127_5104588_2 Aminotransferase class-III K07250 - 2.6.1.19,2.6.1.22 1.163e-203 642.0
DYD3_k127_5104588_3 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 293.0
DYD3_k127_5104588_4 - - - - 0.0000000000000000000000000000000000002167 145.0
DYD3_k127_5122999_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1039.0
DYD3_k127_5122999_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 3.022e-291 918.0
DYD3_k127_5122999_10 TIR domain - - - 0.0000000000000000000000000000000004732 150.0
DYD3_k127_5122999_11 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000001566 135.0
DYD3_k127_5122999_12 pathogenesis - - - 0.0005216 51.0
DYD3_k127_5122999_2 Dioxygenases related to 2-nitropropane dioxygenase K00459 - 1.13.12.16 4.392e-233 728.0
DYD3_k127_5122999_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 402.0
DYD3_k127_5122999_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000472 321.0
DYD3_k127_5122999_5 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001845 270.0
DYD3_k127_5122999_6 Aminoacyl-tRNA editing domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004048 250.0
DYD3_k127_5122999_7 helix_turn_helix ASNC type K03719 - - 0.000000000000000000000000000000000000000000000000000000000000005683 218.0
DYD3_k127_5122999_8 Ferric uptake regulator family K09826 - - 0.000000000000000000000000000000000000000000000000004388 190.0
DYD3_k127_5122999_9 Ribosomal_S15 K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000009455 151.0
DYD3_k127_5152855_0 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01760 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 465.0
DYD3_k127_5152855_1 Major facilitator Superfamily K08369 - - 0.0000000000000000000000000000000000000000001708 168.0
DYD3_k127_5172461_0 Sulfate ABC transporter periplasmic sulfate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 404.0
DYD3_k127_5172461_1 von Willebrand factor type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005155 259.0
DYD3_k127_5172461_2 NADH flavin oxidoreductase NADH oxidase K00317 - 1.5.8.1,1.5.8.2 0.0000000000000000000000000000000000000000000000000000000000000000000007469 241.0
DYD3_k127_5172461_3 5-bromo-4-chloroindolyl phosphate hydrolysis protein - - - 0.000000000000000000000000000000000000000000000000005873 187.0
DYD3_k127_5172461_4 transcriptional regulators containing the CopG Arc MetJ DNA-binding domain K07746 - - 0.00000000000000176 80.0
DYD3_k127_5172461_5 ParE toxin of type II toxin-antitoxin system, parDE K19092 - - 0.00001992 49.0
DYD3_k127_5190820_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.026e-310 959.0
DYD3_k127_5190820_1 carbohydrate transport K02027,K10117 - - 4.226e-222 698.0
DYD3_k127_5190820_10 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000001459 205.0
DYD3_k127_5190820_11 Predicted integral membrane protein (DUF2282) - - - 0.0000000000000000000000000004019 121.0
DYD3_k127_5190820_2 TOBE domain K05816,K10112 - 3.6.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 546.0
DYD3_k127_5190820_3 COG1175 ABC-type sugar transport systems permease components K02025,K10118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 533.0
DYD3_k127_5190820_4 ABC-type sugar transport system, permease component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 471.0
DYD3_k127_5190820_5 Oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 439.0
DYD3_k127_5190820_6 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 364.0
DYD3_k127_5190820_7 Belongs to the UPF0276 family K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 347.0
DYD3_k127_5190820_8 FCD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 333.0
DYD3_k127_5190820_9 Domain of unknown function (DUF4062) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 301.0
DYD3_k127_5196301_0 Domain of unknown function (DUF4336) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 389.0
DYD3_k127_5196301_1 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 355.0
DYD3_k127_5196301_2 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 302.0
DYD3_k127_5196301_3 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000002968 205.0
DYD3_k127_5196301_4 Belongs to the flagella basal body rod proteins family K02388 GO:0005575,GO:0005623,GO:0009288,GO:0009425,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464 - 0.000000000000000000000000000000000000000000000000003798 187.0
DYD3_k127_5196301_5 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.00000000000000000000000000581 117.0
DYD3_k127_5196301_6 homolog of the cytoplasmic domain of flagellar protein FhlB K04061 - - 0.000000000000000000001021 101.0
DYD3_k127_5196301_7 Flagellar biosynthesis protein, FliO K02418 - - 0.0000000000001386 78.0
DYD3_k127_5196301_8 His Kinase A (phosphoacceptor) domain - - - 0.0000000000003986 81.0
DYD3_k127_5203747_0 Virulence factor SrfB - - - 9.882e-316 996.0
DYD3_k127_5203747_1 Putative bacterial virulence factor - - - 1.27e-238 767.0
DYD3_k127_5203747_10 AsmA family K07289 - - 0.0000000000000000000000000000000000003426 158.0
DYD3_k127_5203747_12 beta-lactamase activity K07126 - - 0.0000000000000000000000001901 120.0
DYD3_k127_5203747_13 von Willebrand factor (vWF) type A domain - - - 0.000000000000002958 85.0
DYD3_k127_5203747_14 Domain of unknown function (DUF4169) - - - 0.00000000001881 66.0
DYD3_k127_5203747_15 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0004045 50.0
DYD3_k127_5203747_2 Thiol disulfide interchange protein K04084,K08344 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 585.0
DYD3_k127_5203747_3 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 559.0
DYD3_k127_5203747_4 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 457.0
DYD3_k127_5203747_5 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 368.0
DYD3_k127_5203747_6 Pfam:Pyridox_oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006604 278.0
DYD3_k127_5203747_7 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001221 281.0
DYD3_k127_5203747_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000003168 245.0
DYD3_k127_5203747_9 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000379 201.0
DYD3_k127_5210667_0 GMC oxidoreductase - - - 4.703e-195 620.0
DYD3_k127_5210667_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006481 567.0
DYD3_k127_5210667_2 Fumarase C C-terminus K01744 - 4.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 555.0
DYD3_k127_5210667_3 Binding-protein-dependent transport system inner membrane component K17317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007723 478.0
DYD3_k127_5210667_4 Belongs to the ABC transporter superfamily K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 480.0
DYD3_k127_5210667_5 Binding-protein-dependent transport system inner membrane component K17316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005393 447.0
DYD3_k127_5210667_6 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008101 408.0
DYD3_k127_5216499_0 Cysteine synthase K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 544.0
DYD3_k127_5216499_1 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007122 385.0
DYD3_k127_5216499_2 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 342.0
DYD3_k127_5216499_3 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006565 291.0
DYD3_k127_5216499_4 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000002444 173.0
DYD3_k127_5216499_5 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000000000000000000000000000000001822 173.0
DYD3_k127_5216499_6 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000007039 157.0
DYD3_k127_5216499_7 Domain of unknown function (DUF1330) - - - 0.000000000000000000000000000000465 128.0
DYD3_k127_5216499_8 SnoaL-like domain - - - 0.0000000000000000000000000001135 120.0
DYD3_k127_5216499_9 - - - - 0.000000147 58.0
DYD3_k127_5239033_0 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 514.0
DYD3_k127_5239033_1 Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 444.0
DYD3_k127_5239033_2 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005049 420.0
DYD3_k127_5239033_3 Lytic murein transglycosylase K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 351.0
DYD3_k127_5239033_4 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 291.0
DYD3_k127_5239033_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000299 250.0
DYD3_k127_5239033_6 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000002862 117.0
DYD3_k127_5242378_0 Tripartite tricarboxylate transporter TctA family K07793 - - 3.859e-271 840.0
DYD3_k127_5242378_1 Belongs to the long-chain O-acyltransferase family K00635 GO:0000302,GO:0001666,GO:0003674,GO:0003824,GO:0004144,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0009058,GO:0009628,GO:0009987,GO:0010035,GO:0016020,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0019432,GO:0030312,GO:0036293,GO:0040007,GO:0042221,GO:0042493,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044419,GO:0044464,GO:0045017,GO:0046460,GO:0046463,GO:0046486,GO:0047196,GO:0050896,GO:0051704,GO:0070482,GO:0071704,GO:0071731,GO:0071944,GO:0097366,GO:1901576,GO:1901698,GO:1901700 2.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 419.0
DYD3_k127_5242378_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001941 244.0
DYD3_k127_5242378_3 Tripartite tricarboxylate transporter TctB family K07794 - - 0.00000000000000000000000000000000000000000000000000002787 192.0
DYD3_k127_5242539_0 Luciferase-like monooxygenase K04091 - 1.14.14.5 1.902e-196 619.0
DYD3_k127_5242539_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 571.0
DYD3_k127_5242539_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K15553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006824 397.0
DYD3_k127_5242539_3 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000006992 153.0
DYD3_k127_5242539_4 protein conserved in bacteria K09984 - - 0.000000000000000000000000000000000007174 140.0
DYD3_k127_5264857_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1219.0
DYD3_k127_5264857_1 propionyl-CoA carboxylase K01965 GO:0003674,GO:0003824,GO:0004658,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009374,GO:0009987,GO:0016421,GO:0016874,GO:0016885,GO:0017144,GO:0019752,GO:0019842,GO:0019899,GO:0031406,GO:0031974,GO:0032787,GO:0033218,GO:0033293,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0070013,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901681 6.4.1.3 9.244e-287 894.0
DYD3_k127_5264857_2 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 9.112e-276 854.0
DYD3_k127_5264857_3 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 358.0
DYD3_k127_5264857_4 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009945 264.0
DYD3_k127_5264857_5 ATP12 chaperone protein - - - 0.00000000000000000000000000000000000000000000000000000000001136 214.0
DYD3_k127_5264857_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000005827 151.0
DYD3_k127_5264857_7 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000000000000000005312 130.0
DYD3_k127_5264857_8 Acylphosphatase K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000001133 105.0
DYD3_k127_5269168_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008568 534.0
DYD3_k127_5269168_1 receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 511.0
DYD3_k127_5269168_2 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009316 480.0
DYD3_k127_5269168_3 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000000000487 147.0
DYD3_k127_5269168_4 Alpha beta hydrolase - - - 0.0000000000000000000000000000000002475 133.0
DYD3_k127_5269168_5 - - - - 0.000001433 61.0
DYD3_k127_5277582_0 Glycine cleavage T-protein C-terminal barrel domain K00302 - 1.5.3.1 0.0 1325.0
DYD3_k127_5277582_1 Serine dehydratase beta chain K01752 - 4.3.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 604.0
DYD3_k127_5277582_2 Sarcosine oxidase, gamma subunit family K00305 - 1.5.3.1 0.00000000000000000000000000000000000000003611 158.0
DYD3_k127_5279976_0 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006899 387.0
DYD3_k127_5279976_1 Domain of unknown function (DUF1989) K09967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009877 355.0
DYD3_k127_5279976_2 Domain of unknown function (DUF1989) K09967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 351.0
DYD3_k127_5279976_3 Carbamoyl-phosphate synthase L chain ATP-binding K01965 GO:0003674,GO:0003824,GO:0004658,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009374,GO:0009987,GO:0016421,GO:0016874,GO:0016885,GO:0017144,GO:0019752,GO:0019842,GO:0019899,GO:0031406,GO:0031974,GO:0032787,GO:0033218,GO:0033293,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0070013,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901681 6.4.1.3 0.0000000000000000000000001449 108.0
DYD3_k127_528369_0 Glycosyl hydrolases family 15 - - - 2.479e-241 771.0
DYD3_k127_528369_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.276e-220 690.0
DYD3_k127_528369_2 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 524.0
DYD3_k127_528369_3 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 423.0
DYD3_k127_528369_4 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 362.0
DYD3_k127_528369_5 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000001347 216.0
DYD3_k127_528369_6 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000000000000000000000002103 207.0
DYD3_k127_528369_7 protein possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000006967 132.0
DYD3_k127_5284356_0 Flavin-binding monooxygenase-like K14520 - 1.14.13.84 8.259e-242 764.0
DYD3_k127_5284356_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 6.822e-206 651.0
DYD3_k127_5284356_10 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000000000000000000000000000001356 230.0
DYD3_k127_5284356_11 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.00000000000000000000000000000000000000000000007776 172.0
DYD3_k127_5284356_12 Protein of unknown function (DUF3703) - - - 0.000000004107 57.0
DYD3_k127_5284356_13 - - - - 0.00002259 49.0
DYD3_k127_5284356_2 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 543.0
DYD3_k127_5284356_3 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 392.0
DYD3_k127_5284356_4 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000623 348.0
DYD3_k127_5284356_5 Thioesterase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001066 279.0
DYD3_k127_5284356_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005834 286.0
DYD3_k127_5284356_7 Predicted permease YjgP/YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001805 286.0
DYD3_k127_5284356_8 Predicted permease YjgP/YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002371 255.0
DYD3_k127_5284356_9 Chaperone SurA K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000005552 259.0
DYD3_k127_5288424_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 GO:0000175,GO:0003674,GO:0003724,GO:0003824,GO:0004386,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008408,GO:0008997,GO:0009056,GO:0009057,GO:0009266,GO:0009409,GO:0009628,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016896,GO:0017111,GO:0019222,GO:0019439,GO:0034458,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 1.185e-238 764.0
DYD3_k127_5288424_1 gntR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 439.0
DYD3_k127_5288424_2 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000003343 162.0
DYD3_k127_5288424_3 Protein of unknown function (DUF983) - - - 0.00000000000000000000000000000000000000001412 164.0
DYD3_k127_5288424_4 Excinuclease ABC C subunit K07461 - - 0.000000000000000003646 86.0
DYD3_k127_5288424_6 PFAM Excinuclease ABC, C subunit domain protein K07461 - - 0.000000004265 57.0
DYD3_k127_5320887_0 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 372.0
DYD3_k127_5320887_1 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001941 267.0
DYD3_k127_5320887_2 cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000000001283 206.0
DYD3_k127_5320887_3 High-affinity nickel-transport protein K08970 - - 0.00000000000000000000000000000000000000000000000000001412 202.0
DYD3_k127_5320887_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.000000000000000000000000000000000000000003278 164.0
DYD3_k127_5320887_5 Protein of unknown function (DUF1007) - - - 0.000000000000000000000000000000000000003223 154.0
DYD3_k127_5320887_6 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid K03328,K16695 - - 0.0000000000000002752 83.0
DYD3_k127_5320887_7 sulfuric ester hydrolase activity - - - 0.00000005098 60.0
DYD3_k127_5327890_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 8.776e-279 871.0
DYD3_k127_5327890_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008925 569.0
DYD3_k127_5327890_2 transcriptional regulator K17736 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 343.0
DYD3_k127_535930_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 4.892e-215 685.0
DYD3_k127_535930_1 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005543 505.0
DYD3_k127_535930_10 Nitroreductase family K04719 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016491,GO:0016705,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.13.11.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001381 273.0
DYD3_k127_535930_11 COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases K02230 - 6.6.1.2 0.00000000000000000000000000000000000000000000000000000004693 204.0
DYD3_k127_535930_12 Probable cobalt transporter subunit (CbtA) - - - 0.0000000000000000000000000000000000000000001911 169.0
DYD3_k127_535930_13 Protein of unknown function (DUF1636) - - - 0.000000000000000000000001134 111.0
DYD3_k127_535930_14 Probable cobalt transporter subunit (CbtB) - - - 0.00000000002873 65.0
DYD3_k127_535930_2 Cobalamin synthesis protein cobW C-terminal domain K02234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 470.0
DYD3_k127_535930_3 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 383.0
DYD3_k127_535930_4 Belongs to the glutamine synthetase family K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 379.0
DYD3_k127_535930_5 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 357.0
DYD3_k127_535930_6 COG0079 Histidinol-phosphate aromatic aminotransferase and cobyric acid decarboxylase K02225 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006595 357.0
DYD3_k127_535930_7 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 351.0
DYD3_k127_535930_8 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006119 318.0
DYD3_k127_535930_9 PaaX-like protein C-terminal domain K02616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001551 300.0
DYD3_k127_5391926_0 Belongs to the radical SAM superfamily. PqqE family K06139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 492.0
DYD3_k127_5391926_1 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004773 437.0
DYD3_k127_5391926_2 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 392.0
DYD3_k127_5391926_3 May be involved in the transport of PQQ or its precursor to the periplasm K06136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 342.0
DYD3_k127_5391926_4 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 - 1.3.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 340.0
DYD3_k127_5391926_5 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 301.0
DYD3_k127_5391926_6 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000008528 237.0
DYD3_k127_5391926_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000181 229.0
DYD3_k127_5391926_8 Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione K03396 - 4.4.1.22 0.0000000000000000000000000007535 113.0
DYD3_k127_5391926_9 Protein of unknown function (DUF2380) - - - 0.00000000000000000000000000999 115.0
DYD3_k127_5396480_0 type VI secretion protein K11891 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 404.0
DYD3_k127_5396480_1 Type VI secretion system protein DotU - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007396 330.0
DYD3_k127_5410156_0 Binding-protein-dependent transport system inner membrane component K12369 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 478.0
DYD3_k127_5410156_1 Oligopeptide/dipeptide transporter, C-terminal region K02032,K12372 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 419.0
DYD3_k127_5410156_2 N-terminal TM domain of oligopeptide transport permease C K12370 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 424.0
DYD3_k127_5410156_3 Oligopeptide/dipeptide transporter, C-terminal region K12371 GO:0000166,GO:0003674,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008144,GO:0008150,GO:0015232,GO:0015886,GO:0016020,GO:0017076,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901678 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 393.0
DYD3_k127_5410156_4 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 293.0
DYD3_k127_5410156_5 PFAM ABC transporter related K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005196 263.0
DYD3_k127_5419963_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 291.0
DYD3_k127_5419963_1 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006126 266.0
DYD3_k127_5419963_2 PFAM Sterol-binding domain protein - - - 0.000000000000000000000000000000007636 130.0
DYD3_k127_5419963_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K07062 - - 0.0000000000000000000000000711 111.0
DYD3_k127_543140_0 Activator of aromatic catabolism - - - 3.423e-241 761.0
DYD3_k127_543140_1 FAD dependent oxidoreductase K00313 - - 1.787e-223 698.0
DYD3_k127_543140_10 PFAM Phenol hydroxylase conserved region K16245 - - 0.0000000000000000000000000000002012 124.0
DYD3_k127_543140_11 May protect the nitrogenase Fe-Mo protein from oxidative damage K02595 - - 0.0000000000000000000000000000005972 134.0
DYD3_k127_543140_12 NifU-like N terminal domain K04488,K13819 - - 0.00000001244 55.0
DYD3_k127_543140_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 7.737e-207 650.0
DYD3_k127_543140_3 Electron transfer flavoprotein domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 591.0
DYD3_k127_543140_4 Oxidoreductase FAD-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 547.0
DYD3_k127_543140_5 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649,K02594 - 2.3.3.13,2.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 459.0
DYD3_k127_543140_6 PFAM Electron transfer flavoprotein K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 429.0
DYD3_k127_543140_7 serine acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000687 366.0
DYD3_k127_543140_8 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003786 238.0
DYD3_k127_543140_9 Could be a 3Fe-4S cluster-containing protein K03855 - - 0.0000000000000000000000000000000000000000000002372 171.0
DYD3_k127_5439220_0 L-2-hydroxyglutarate oxidase LhgO K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 578.0
DYD3_k127_5439220_1 FGGY family of carbohydrate kinases, N-terminal domain K00864 - 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 561.0
DYD3_k127_5439220_2 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005664 516.0
DYD3_k127_5439220_3 pyridine nucleotide-disulfide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005174 442.0
DYD3_k127_5439220_4 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005365 429.0
DYD3_k127_5439220_5 glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 309.0
DYD3_k127_5439220_6 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008954 244.0
DYD3_k127_5439220_7 protein-(glutamine-N5) methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000003417 215.0
DYD3_k127_5439220_8 6-pyruvoyl tetrahydropterin synthase - - - 0.000000000000000000000000000000000000000000000000000000583 196.0
DYD3_k127_5446042_0 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 5.209e-221 696.0
DYD3_k127_5446042_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 597.0
DYD3_k127_5446042_10 PFAM Alpha beta hydrolase fold-3 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 306.0
DYD3_k127_5446042_11 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003205 291.0
DYD3_k127_5446042_12 transcriptional regulator K09017,K22105 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009059 281.0
DYD3_k127_5446042_13 belongs to the aldehyde dehydrogenase family K22445 - 1.2.99.10 0.00000000000000000000000000000000000000000000000001749 189.0
DYD3_k127_5446042_14 Protein of unknown function (DUF1329) - - - 0.0000003795 54.0
DYD3_k127_5446042_2 In Escherichia coli this enzyme appears to be an NAD NADP -dependent succinate semialdehyde dehydrogenase K00135,K08324 - 1.2.1.16,1.2.1.20,1.2.1.24,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 579.0
DYD3_k127_5446042_3 3-beta hydroxysteroid dehydrogenase K22320 - 1.1.1.412 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 542.0
DYD3_k127_5446042_4 beta-keto acid cleavage enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 501.0
DYD3_k127_5446042_5 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 471.0
DYD3_k127_5446042_6 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 420.0
DYD3_k127_5446042_7 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 412.0
DYD3_k127_5446042_8 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005721 334.0
DYD3_k127_5446042_9 Protein of unknown function (DUF1302) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000744 346.0
DYD3_k127_5446204_0 Filamentation induced by cAMP protein fic - - - 8.662e-199 625.0
DYD3_k127_5446204_1 ABC transporter transmembrane region K02021 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 626.0
DYD3_k127_5446204_10 Addiction module antitoxin, RelB DinJ family - - - 0.000000000000000001421 87.0
DYD3_k127_5446204_11 COG1587 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.00000000000000004508 94.0
DYD3_k127_5446204_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 469.0
DYD3_k127_5446204_3 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 307.0
DYD3_k127_5446204_4 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 288.0
DYD3_k127_5446204_5 HemY protein N-terminus K02498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006444 286.0
DYD3_k127_5446204_6 Bacterial periplasmic substrate-binding proteins K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007469 241.0
DYD3_k127_5446204_7 COG1587 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000001231 194.0
DYD3_k127_5446204_8 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000003018 136.0
DYD3_k127_5446204_9 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000000000000000000002802 119.0
DYD3_k127_5447558_0 ABC transporter K02471 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005613 567.0
DYD3_k127_5447558_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007727 457.0
DYD3_k127_5447558_2 Inhibitor of apoptosis-promoting Bax1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001911 284.0
DYD3_k127_5447558_4 Protein of unknown function (DUF861) - - - 0.0000000000000000000000000000004305 128.0
DYD3_k127_5447558_6 glyoxalase III activity - - - 0.0000000000000001604 89.0
DYD3_k127_5447558_7 Resolvase - - - 0.00005834 50.0
DYD3_k127_5447558_8 - - - - 0.0009726 42.0
DYD3_k127_5453744_0 Belongs to the RuBisCO large chain family K01601 - 4.1.1.39 1.604e-292 903.0
DYD3_k127_5453744_1 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 497.0
DYD3_k127_5453744_2 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 445.0
DYD3_k127_5453744_3 Belongs to the ribulose-phosphate 3-epimerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007597 251.0
DYD3_k127_5453744_4 ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000000000000003404 216.0
DYD3_k127_5486597_0 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K05685 - - 1.408e-257 808.0
DYD3_k127_5486597_1 Outer membrane efflux protein - - - 0.000000000000000003486 99.0
DYD3_k127_5499218_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00023,K00059 - 1.1.1.100,1.1.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 370.0
DYD3_k127_5499218_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 316.0
DYD3_k127_5499218_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005046 293.0
DYD3_k127_5499218_3 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000001038 264.0
DYD3_k127_5499218_4 Cupin superfamily (DUF985) K09705 - - 0.0000000000000000000000000000000000000000000000000000000000000002133 230.0
DYD3_k127_5499218_5 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000001273 217.0
DYD3_k127_5499218_6 Methyltransferase domain - - - 0.00000000000000000000000000000000000002711 147.0
DYD3_k127_5499218_7 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000005403 131.0
DYD3_k127_5499218_8 PIN domain - - - 0.000000000000006587 87.0
DYD3_k127_5499218_9 protein encoded in hypervariable junctions of pilus gene clusters - - - 0.00000000000007643 82.0
DYD3_k127_5509778_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 318.0
DYD3_k127_5509778_1 Protein of unknown function (DUF3768) - - - 0.0000000000000000000000000002147 116.0
DYD3_k127_5509778_2 Protein of unknown function (DUF3768) - - - 0.0000000000000000000000008695 107.0
DYD3_k127_5509778_4 - - - - 0.0000334 56.0
DYD3_k127_5517221_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 1.979e-234 732.0
DYD3_k127_5517221_1 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 520.0
DYD3_k127_5517221_2 Ribosomal protein L11 methyltransferase (PrmA) - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010565,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031974,GO:0031998,GO:0031999,GO:0032259,GO:0036211,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043467,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045833,GO:0045922,GO:0046320,GO:0046322,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050994,GO:0050995,GO:0051341,GO:0051354,GO:0062012,GO:0062014,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1904732,GO:1904733,GO:1904735,GO:1904736 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004192 278.0
DYD3_k127_5517221_3 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000000000000000000001375 123.0
DYD3_k127_5517221_5 - - - - 0.00000000000000107 92.0
DYD3_k127_5520240_0 FAD dependent oxidoreductase K02846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 510.0
DYD3_k127_5520240_1 PFAM phenylalanine histidine ammonia-lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004469 440.0
DYD3_k127_5520240_2 COG0583 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006637 426.0
DYD3_k127_5520240_3 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 314.0
DYD3_k127_5520240_4 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000002452 188.0
DYD3_k127_5520240_5 Protein of unknown function (DUF3297) - - - 0.0000000000000000000000000000000000009586 142.0
DYD3_k127_5520240_6 - - - - 0.000000000000000000000000000000000001777 147.0
DYD3_k127_5531216_0 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 457.0
DYD3_k127_5531216_1 Patatin-like phospholipase K07001 GO:0003674,GO:0003824,GO:0016787 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002176 287.0
DYD3_k127_5531216_2 Inositol monophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000001334 237.0
DYD3_k127_5531216_3 - - - - 0.000000000000000000000000000000000000000000000000000000001617 216.0
DYD3_k127_5531216_4 PFAM Glutathione S-transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000125 216.0
DYD3_k127_5531216_5 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000000002064 153.0
DYD3_k127_5531216_6 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000002107 154.0
DYD3_k127_5531216_7 PGAP1-like protein - - - 0.0000000000000000000004294 99.0
DYD3_k127_5547029_0 PFAM metallophosphoesterase K01090 - 3.1.3.16 0.0 1028.0
DYD3_k127_5547029_1 Belongs to the glutamate synthase family - - - 1.5e-280 869.0
DYD3_k127_5547029_10 Coenzyme A transferase K01029 - 2.8.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 348.0
DYD3_k127_5547029_11 PFAM acyltransferase 3 K16568 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 312.0
DYD3_k127_5547029_12 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 293.0
DYD3_k127_5547029_13 Pfam:Pyridox_oxidase K07006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 284.0
DYD3_k127_5547029_14 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001207 269.0
DYD3_k127_5547029_15 Carboxylesterase family K01066 - - 0.00000000000000000000000000000000000000000000000000000000000000002594 237.0
DYD3_k127_5547029_16 FR47-like protein - - - 0.000000000000002624 82.0
DYD3_k127_5547029_17 - - - - 0.00000008048 57.0
DYD3_k127_5547029_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 2.542e-269 845.0
DYD3_k127_5547029_3 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000653 581.0
DYD3_k127_5547029_4 RNA repair, ligase-Pnkp-associating, region of Hen1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 533.0
DYD3_k127_5547029_5 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 526.0
DYD3_k127_5547029_6 Phosphoglycerate kinase K00927 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 499.0
DYD3_k127_5547029_7 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005665 464.0
DYD3_k127_5547029_8 Coenzyme A transferase K01028,K01034 - 2.8.3.5,2.8.3.8,2.8.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 399.0
DYD3_k127_5547029_9 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 361.0
DYD3_k127_5547403_0 Proton-conducting membrane transporter K00343,K05568 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 424.0
DYD3_k127_5547403_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15598 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 393.0
DYD3_k127_5547403_2 Domain of unknown function (DUF4040) K05566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001462 279.0
DYD3_k127_5547403_3 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15599 - - 0.0000000000000000000000000000000000000000000000000000000000000000001531 245.0
DYD3_k127_5547403_4 Cold shock protein domain K03704 - - 0.000000000000000000000000000000000000000000000000001851 191.0
DYD3_k127_5547403_5 ABC transporter K15600 - - 0.00000000000000000000000000000000000000000002276 165.0
DYD3_k127_5547403_6 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05567 - - 0.00000000000000000000000000000000000004583 148.0
DYD3_k127_5547403_7 Cation antiporter K05569 - - 0.0000000000000000000000000000938 123.0
DYD3_k127_5547403_8 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05570 - - 0.00000000000000000008022 93.0
DYD3_k127_5547403_9 TIGRFAM monovalent cation proton antiporter, MnhG PhaG subunit K05571 - - 0.00000000000000004794 90.0
DYD3_k127_5563100_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.826e-203 648.0
DYD3_k127_5563100_1 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000004007 130.0
DYD3_k127_5563100_2 PFAM peptidase - - - 0.00000000000000000000000005407 121.0
DYD3_k127_556573_0 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081 470.0
DYD3_k127_556573_1 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007533 362.0
DYD3_k127_556573_10 - - - - 0.0000000000000007482 83.0
DYD3_k127_556573_11 - - - - 0.0000000007819 62.0
DYD3_k127_556573_2 alpha beta - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 339.0
DYD3_k127_556573_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 315.0
DYD3_k127_556573_4 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003523 246.0
DYD3_k127_556573_5 Fic/DOC family K04095 - - 0.00000000000000000000000000000000000000000000000000000000000000004039 227.0
DYD3_k127_556573_6 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000003325 215.0
DYD3_k127_556573_7 Thiolase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000005924 166.0
DYD3_k127_556573_8 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000002783 151.0
DYD3_k127_556573_9 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.00000000000000000000006646 102.0
DYD3_k127_5573207_0 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 507.0
DYD3_k127_5573207_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 320.0
DYD3_k127_5573207_2 Phytoene squalene synthetase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000003325 247.0
DYD3_k127_5573207_3 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000318 109.0
DYD3_k127_5578549_0 Belongs to the thiolase family K00626 - 2.3.1.9 4.735e-197 620.0
DYD3_k127_5578549_1 cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 592.0
DYD3_k127_5578549_2 Creatinase/Prolidase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 542.0
DYD3_k127_5578549_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 447.0
DYD3_k127_5578549_4 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 355.0
DYD3_k127_5578549_5 tetR family - - - 0.0000000000000000000000000000000000000000000000000000001113 210.0
DYD3_k127_5578549_6 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000006945 152.0
DYD3_k127_5578549_7 Phosphotransferase enzyme family - - - 0.000000004082 63.0
DYD3_k127_5578549_8 Tex-like protein N-terminal domain K06959 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896 - 0.0001199 44.0
DYD3_k127_558564_0 ABC-type dipeptide transport system periplasmic component K02035 - - 8.74e-238 750.0
DYD3_k127_558564_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 5.075e-233 737.0
DYD3_k127_558564_2 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005635 591.0
DYD3_k127_558564_3 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006604 489.0
DYD3_k127_558564_4 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001663 274.0
DYD3_k127_558564_5 S-adenosyl-L-methionine methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000301 192.0
DYD3_k127_558564_6 Phosphoglycerate mutase family - - - 0.0000000000000000000000000000000000000002022 159.0
DYD3_k127_558564_7 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000001386 92.0
DYD3_k127_5602886_0 PLD-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 376.0
DYD3_k127_5602886_1 Domain of unknown function (DUF927) - - - 0.0000000009486 72.0
DYD3_k127_5608788_0 Phosphonate ABC transporter K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 382.0
DYD3_k127_5608788_1 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 310.0
DYD3_k127_5608788_2 short chain dehydrogenase K00218 - 1.3.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 292.0
DYD3_k127_5608788_3 Steryl acetyl hydrolase K14731 - 3.1.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000335 283.0
DYD3_k127_5608788_4 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002107 250.0
DYD3_k127_5608788_5 Protein of unknown function (DUF1045) - - - 0.0000000000000000000000000000000002918 136.0
DYD3_k127_5608788_6 Tetracyclin repressor, C-terminal all-alpha domain - - - 0.0000000000001026 79.0
DYD3_k127_5622341_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 533.0
DYD3_k127_5622341_1 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 387.0
DYD3_k127_5622341_2 PFAM class II aldolase adducin family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 343.0
DYD3_k127_5622341_3 maleylacetoacetate isomerase K01801 - 5.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 317.0
DYD3_k127_5622341_4 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002939 271.0
DYD3_k127_5622341_5 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.0000000000000000000000000000000000000000584 160.0
DYD3_k127_5628246_0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 7.944e-231 723.0
DYD3_k127_5628246_1 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000139 267.0
DYD3_k127_5628246_2 PFAM NADH Ubiquinone plastoquinone (complex I) K12141 - - 0.00000000000000001991 81.0
DYD3_k127_5628246_3 ArsC family K00537 GO:0003674,GO:0003824,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008794,GO:0009987,GO:0016491,GO:0030611,GO:0030613,GO:0030614,GO:0033554,GO:0042221,GO:0046685,GO:0050896,GO:0051716,GO:0055114 1.20.4.1 0.0000000000003951 71.0
DYD3_k127_5628364_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.0 1012.0
DYD3_k127_5628364_1 Male sterility protein - - - 2.315e-312 969.0
DYD3_k127_5628364_10 Flagellar hook-length control protein FliK K10565 - - 0.000000000000003465 87.0
DYD3_k127_5628364_11 diguanylate cyclase - - - 0.00000000009315 66.0
DYD3_k127_5628364_2 ATPases associated with a variety of cellular activities K16012 - - 6.003e-246 769.0
DYD3_k127_5628364_3 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 9.53e-231 717.0
DYD3_k127_5628364_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005319 483.0
DYD3_k127_5628364_5 Pfam:DUF955 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007838 409.0
DYD3_k127_5628364_6 Nucleoside-diphosphate-sugar epimerases - - - 0.000000000000000000000000000000000000000000000000000000000000001379 232.0
DYD3_k127_5628364_7 - - - - 0.00000000000000000000000000000000000000000000331 171.0
DYD3_k127_5628364_8 Cyd operon protein YbgT K00424 - 1.10.3.14 0.000000000000000001626 85.0
DYD3_k127_5628364_9 N-terminal 7TM region of histidine kinase - - - 0.000000000000001436 87.0
DYD3_k127_5633651_0 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 505.0
DYD3_k127_5633651_1 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 447.0
DYD3_k127_5633651_2 PFAM Acyl-CoA dehydrogenase, type 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005484 331.0
DYD3_k127_5633651_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000809 163.0
DYD3_k127_5633651_4 Flavin reductase like domain - - - 0.00000000000000000000008493 109.0
DYD3_k127_5685086_0 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007707 567.0
DYD3_k127_5685086_1 Major Facilitator Superfamily K19577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 522.0
DYD3_k127_5685086_2 ICC-like phosphoesterases K06953 - - 0.0000000000000000000000000000000000005207 144.0
DYD3_k127_5685459_0 Bacterial extracellular solute-binding protein K02055 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 557.0
DYD3_k127_5685459_1 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 383.0
DYD3_k127_5685459_2 phosphorylase K01243 - 3.2.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000003133 263.0
DYD3_k127_5685459_3 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000000000000000000008439 173.0
DYD3_k127_5685459_4 Bacterial antitoxin of type II TA system, VapB - - - 0.0000000000000000000003692 97.0
DYD3_k127_5697655_0 Aldehyde oxidase and xanthine dehydrogenase a b hammerhead K13482 - 1.17.1.4 0.0 1083.0
DYD3_k127_5697655_1 xylanase chitin deacetylase K01452,K16842,K22278 - 3.5.1.104,3.5.1.41,3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004577 453.0
DYD3_k127_5697655_10 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.000000000000000000000000000000000000002697 153.0
DYD3_k127_5697655_2 CO dehydrogenase flavoprotein C-terminal domain K13481 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 447.0
DYD3_k127_5697655_3 Binding-protein-dependent transport system inner membrane component K02054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 415.0
DYD3_k127_5697655_4 Binding-protein-dependent transport system inner membrane component K02053 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 400.0
DYD3_k127_5697655_5 PFAM Asp Glu hydantoin racemase K16841 - 5.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009485 333.0
DYD3_k127_5697655_6 conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002764 244.0
DYD3_k127_5697655_7 XdhC and CoxI family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000471 226.0
DYD3_k127_5697655_8 OHCU decarboxylase - - - 0.0000000000000000000000000000000000000000000000000000001007 198.0
DYD3_k127_5697655_9 HIUase/Transthyretin family K07127 - 3.5.2.17 0.00000000000000000000000000000000000000000001017 166.0
DYD3_k127_5701951_0 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007526 481.0
DYD3_k127_5701951_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 462.0
DYD3_k127_5701951_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 294.0
DYD3_k127_5701951_3 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007136 281.0
DYD3_k127_5701951_4 transcriptional regulator K22105 - - 0.00000000000000000000000000000000000000000000000000000000001091 214.0
DYD3_k127_5701951_5 helix_turn_helix, Arsenical Resistance Operon Repressor K22042 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000008074 160.0
DYD3_k127_5701951_6 Protein of unknown function (DUF2892) - - - 0.000000000000000000000000000000006323 130.0
DYD3_k127_5701951_7 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - - - 0.000000000000000000000002838 104.0
DYD3_k127_5701951_8 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000002441 58.0
DYD3_k127_5726663_0 Binding-protein-dependent transport system inner membrane component K02054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 529.0
DYD3_k127_5726663_1 protein involved in outer membrane biogenesis K07290 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007923 426.0
DYD3_k127_5726663_2 Binding-protein-dependent transport system inner membrane component K02053 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 341.0
DYD3_k127_5726663_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001476 235.0
DYD3_k127_5726663_4 PFAM glutathione-dependent formaldehyde-activating GFA - - - 0.00000000000000000000000000000000000000000000000435 175.0
DYD3_k127_5731621_0 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000305 191.0
DYD3_k127_5731621_1 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000004851 177.0
DYD3_k127_5731621_2 cytochrome P450 - - - 0.00000000000000000000000000000000000000005729 160.0
DYD3_k127_5731621_3 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.0000000000000000000000000000000000008292 141.0
DYD3_k127_5742996_0 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 2.508e-211 662.0
DYD3_k127_5742996_1 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 GO:0003674,GO:0003824,GO:0008410,GO:0016740,GO:0016782,GO:0047369 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 549.0
DYD3_k127_5742996_2 Peptidase dimerisation domain K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 540.0
DYD3_k127_5742996_3 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005748 346.0
DYD3_k127_5742996_4 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928 322.0
DYD3_k127_5742996_5 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 302.0
DYD3_k127_5742996_6 Sirohaem biosynthesis protein central K02304 - 1.3.1.76,4.99.1.4 0.000000000000000000000000000000000000000000000000003489 187.0
DYD3_k127_5742996_7 Type III flagellar switch regulator (C-ring) FliN C-term K02417 - - 0.00000000000000000000001383 102.0
DYD3_k127_5742996_8 Autoinducer binding domain - - - 0.00000000000000000000003264 109.0
DYD3_k127_5742996_9 Autoinducer synthase - - - 0.0001978 49.0
DYD3_k127_5755346_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 3.783e-279 880.0
DYD3_k127_5755346_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 9.523e-224 699.0
DYD3_k127_5755346_10 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000001091 212.0
DYD3_k127_5755346_11 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000001501 124.0
DYD3_k127_5755346_12 COG2825 Outer membrane protein - - - 0.00000000000001519 81.0
DYD3_k127_5755346_2 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000646 454.0
DYD3_k127_5755346_3 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 417.0
DYD3_k127_5755346_4 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 399.0
DYD3_k127_5755346_5 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 374.0
DYD3_k127_5755346_6 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 346.0
DYD3_k127_5755346_7 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 332.0
DYD3_k127_5755346_8 Protein of unknown function (DUF1009) K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000004217 236.0
DYD3_k127_5755346_9 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000008586 213.0
DYD3_k127_5766655_0 flavoprotein involved in K transport K07222 - - 0.0 1082.0
DYD3_k127_5766655_1 Sigma-54 interaction domain K21405 - - 1.232e-295 917.0
DYD3_k127_5766655_10 Sulphur oxidation protein SoxZ - - - 0.0000000000000000000000000000000000000000000000000000000003472 220.0
DYD3_k127_5766655_11 Protein of unknown function (DUF779) K09959 - - 0.000000000000000000000000000000000000000000000000000000001455 204.0
DYD3_k127_5766655_12 Bacterial periplasmic substrate-binding proteins - - - 0.000000000000000000000000000000000000000000000000000002522 201.0
DYD3_k127_5766655_13 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000001428 189.0
DYD3_k127_5766655_14 EthD domain - - - 0.00000000000000000002889 93.0
DYD3_k127_5766655_2 TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family K00114 - 1.1.2.8 6.917e-288 895.0
DYD3_k127_5766655_3 belongs to the aldehyde dehydrogenase family K00138 - - 3.849e-285 881.0
DYD3_k127_5766655_4 Belongs to the UPF0061 (SELO) family K08997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 567.0
DYD3_k127_5766655_5 peptidyl-tyrosine modification K06139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 472.0
DYD3_k127_5766655_6 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007697 447.0
DYD3_k127_5766655_7 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 - 1.3.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 372.0
DYD3_k127_5766655_8 May be involved in the transport of PQQ or its precursor to the periplasm K06136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 316.0
DYD3_k127_5766655_9 COG0491 Zn-dependent hydrolases, including glyoxylases K01138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009009 306.0
DYD3_k127_5788794_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 5.067e-229 714.0
DYD3_k127_5788794_1 Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 598.0
DYD3_k127_5788794_10 ChrR Cupin-like domain K07167 - - 0.00000000000000000000000000000000000000000008205 171.0
DYD3_k127_5788794_11 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000005925 162.0
DYD3_k127_5788794_12 invasion associated locus B - - - 0.00000000000000000000000000000000000000000156 161.0
DYD3_k127_5788794_13 RelE toxin of RelE / RelB toxin-antitoxin system - - - 0.0000000000000000000000000000000000000003903 152.0
DYD3_k127_5788794_14 Helix-turn-helix XRE-family like proteins K07726 - - 0.00000000000000000000000000000000001085 139.0
DYD3_k127_5788794_15 Cytochrome c K08738 - - 0.000000000000000000000000000000113 128.0
DYD3_k127_5788794_16 protein possibly involved in aromatic compounds catabolism - - - 0.0000000000000000000000000000007486 133.0
DYD3_k127_5788794_17 protein conserved in bacteria - - - 0.0000000000000000000000000001737 121.0
DYD3_k127_5788794_18 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000561 111.0
DYD3_k127_5788794_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 548.0
DYD3_k127_5788794_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 544.0
DYD3_k127_5788794_4 L-asparaginase II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005602 254.0
DYD3_k127_5788794_5 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000001822 229.0
DYD3_k127_5788794_6 PFAM histidine kinase HAMP region domain protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000002063 239.0
DYD3_k127_5788794_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000002559 212.0
DYD3_k127_5788794_8 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000008206 214.0
DYD3_k127_5788794_9 Domain of unknown function (DUF4439) - - - 0.000000000000000000000000000000000000000000000000000000234 202.0
DYD3_k127_5790331_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 601.0
DYD3_k127_5790331_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 577.0
DYD3_k127_5790331_2 Glycine cleavage T-protein C-terminal barrel domain K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008483,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0016769,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0032991,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902494,GO:1990204 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004606 465.0
DYD3_k127_5790331_3 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000484 249.0
DYD3_k127_5790331_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000024 167.0
DYD3_k127_5809830_0 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 541.0
DYD3_k127_5809830_1 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 526.0
DYD3_k127_5809830_2 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K00480 - 1.14.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005096 458.0
DYD3_k127_5809830_3 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 379.0
DYD3_k127_5809830_4 CheB methylesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 318.0
DYD3_k127_5809830_5 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000000000000000000000003507 225.0
DYD3_k127_5809830_6 translation initiation inhibitor, yjgF family - - - 0.000000000000000000000000000000000000000000000000000000005139 202.0
DYD3_k127_5809830_7 Psort location Cytoplasmic, score 8.87 - - - 0.000000000000000000000000000000000000000000000678 177.0
DYD3_k127_5809830_8 Excalibur calcium-binding domain - - - 0.000000000003932 70.0
DYD3_k127_5819685_0 Protein of unknown function (DUF1329) - - - 1.722e-209 661.0
DYD3_k127_5819685_1 Tfp pilus assembly protein tip-associated adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000831 542.0
DYD3_k127_5819685_2 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000003215 100.0
DYD3_k127_5819685_3 protein related to plant photosystem II stability assembly factor - - - 0.000000000001109 71.0
DYD3_k127_5827999_0 Flavin containing amine oxidoreductase K00466 - 1.13.12.3 1.075e-288 907.0
DYD3_k127_5827999_1 Belongs to the TPP enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008097 604.0
DYD3_k127_5827999_2 Arginase family K01480 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006807,GO:0008150,GO:0008152,GO:0008783,GO:0009058,GO:0016787,GO:0016810,GO:0016813,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097055,GO:1901160,GO:1901162,GO:1901564,GO:1901566,GO:1901576 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 535.0
DYD3_k127_5827999_3 TOBE domain K02052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 456.0
DYD3_k127_5827999_4 Binding-protein-dependent transport system inner membrane component K02054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 419.0
DYD3_k127_5827999_5 Binding-protein-dependent transport system inner membrane component K02053 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 396.0
DYD3_k127_5827999_6 Alcohol dehydrogenase GroES-like domain K00001,K13953 GO:0003674,GO:0003824,GO:0004022,GO:0005488,GO:0006081,GO:0006117,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009636,GO:0009987,GO:0010033,GO:0016491,GO:0016614,GO:0016616,GO:0033554,GO:0042221,GO:0042493,GO:0043167,GO:0043169,GO:0044237,GO:0044248,GO:0045471,GO:0046185,GO:0046187,GO:0046677,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:0097305,GO:1901575,GO:1901700 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 385.0
DYD3_k127_5827999_7 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 313.0
DYD3_k127_5837752_0 Transglutaminase/protease-like homologues - - - 0.0 1521.0
DYD3_k127_5837752_1 UDP-glucoronosyl and UDP-glucosyl transferase - - - 2.64e-231 722.0
DYD3_k127_5837752_2 Amino acid permease - - - 8.205e-223 709.0
DYD3_k127_5837752_3 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 520.0
DYD3_k127_5837752_4 Protein of unknown function (DUF861) K06995 - - 0.000000000000000000000000000000000000000000000000000000000009332 220.0
DYD3_k127_5837752_5 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000002186 175.0
DYD3_k127_5845642_0 secondary active sulfate transmembrane transporter activity K06901 - - 2.106e-257 813.0
DYD3_k127_5845642_1 Amidase K02433,K19837 - 3.5.1.84,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 605.0
DYD3_k127_5845642_2 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 353.0
DYD3_k127_5845642_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000001555 186.0
DYD3_k127_5845642_4 Protein of unknown function (DUF3225) - - - 0.0000000000000000000000000000000000004246 145.0
DYD3_k127_5845642_5 Bacterial protein of unknown function (DUF937) - - - 0.0000000000000000000000000003161 119.0
DYD3_k127_5845642_6 Diguanylate cyclase - - - 0.00000001929 56.0
DYD3_k127_5856494_0 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 307.0
DYD3_k127_5856494_1 Glyoxalase bleomycin resistance protein dioxygenase K00462,K14583 - 1.13.11.39,1.13.11.56 0.0000000000000000000000000000000000000000000000000000000000000000000000002045 257.0
DYD3_k127_5856494_2 Protein of unknown function (DUF1302) - - - 0.0000000000000000000000000000000000000000000000000000000001321 217.0
DYD3_k127_5857600_0 FAD binding domain - - - 4.289e-233 732.0
DYD3_k127_5857600_1 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 556.0
DYD3_k127_5857600_2 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004502 542.0
DYD3_k127_5857600_3 OsmC-like protein K06889,K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 522.0
DYD3_k127_5857600_4 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009307 497.0
DYD3_k127_5857600_5 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586 356.0
DYD3_k127_5857600_6 regulatory protein TetR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000113 259.0
DYD3_k127_5857600_7 Enoyl-(Acyl carrier protein) reductase K14189 - - 0.00000000000000000000000001757 118.0
DYD3_k127_5860269_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.562e-223 698.0
DYD3_k127_5860269_1 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 330.0
DYD3_k127_5860269_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005135 335.0
DYD3_k127_5860269_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004616 278.0
DYD3_k127_5860269_4 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000006035 149.0
DYD3_k127_5860269_5 PIN domain - - - 0.0000000000000000000003346 100.0
DYD3_k127_5860269_6 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000001867 106.0
DYD3_k127_5860269_7 toxin-antitoxin pair type II binding - - - 0.000000000004838 70.0
DYD3_k127_5861217_0 PHB de-polymerase C-terminus K05973 - 3.1.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 560.0
DYD3_k127_5861217_1 ATPase with chaperone activity K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007355 361.0
DYD3_k127_5861217_2 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008357 336.0
DYD3_k127_5870554_0 SMART metal-dependent phosphohydrolase, HD K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004772 389.0
DYD3_k127_5870554_1 Transporter associated domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006003 276.0
DYD3_k127_5870554_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000003117 195.0
DYD3_k127_5870554_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000000001375 155.0
DYD3_k127_5876467_0 GGDEF domain - - - 4.901e-230 736.0
DYD3_k127_5876467_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 1.745e-227 708.0
DYD3_k127_5876467_10 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008567 486.0
DYD3_k127_5876467_11 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 489.0
DYD3_k127_5876467_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 481.0
DYD3_k127_5876467_13 Protein of unknown function (DUF1302) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 481.0
DYD3_k127_5876467_14 Belongs to the enoyl-CoA hydratase isomerase family. MenB subfamily K07536 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 461.0
DYD3_k127_5876467_15 Protein of unknown function (DUF1329) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 463.0
DYD3_k127_5876467_16 N-terminal domain of oxidoreductase K07119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 443.0
DYD3_k127_5876467_17 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 418.0
DYD3_k127_5876467_18 Enoyl-(Acyl carrier protein) reductase K00059,K07535 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 401.0
DYD3_k127_5876467_19 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 409.0
DYD3_k127_5876467_2 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 2.734e-222 692.0
DYD3_k127_5876467_20 Acetyl-CoA hydrolase/transferase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 391.0
DYD3_k127_5876467_21 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008507 387.0
DYD3_k127_5876467_22 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005512 369.0
DYD3_k127_5876467_23 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 359.0
DYD3_k127_5876467_24 PFAM MaoC domain protein dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007883 292.0
DYD3_k127_5876467_25 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008372 301.0
DYD3_k127_5876467_26 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003594 286.0
DYD3_k127_5876467_27 N-terminal half of MaoC dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007047 268.0
DYD3_k127_5876467_28 - - - - 0.000000000000000000000000000000000000000000000000000000002633 209.0
DYD3_k127_5876467_29 Cytochrome c oxidase subunit III - - - 0.0000000000000000000000000000000000000000000000000000002329 201.0
DYD3_k127_5876467_3 Thiolase, C-terminal domain K00626 - 2.3.1.9 2.451e-209 655.0
DYD3_k127_5876467_30 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000001783 167.0
DYD3_k127_5876467_31 - - - - 0.000000000000000000000000000000000001564 145.0
DYD3_k127_5876467_32 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000002842 107.0
DYD3_k127_5876467_33 - - - - 0.0000000000000008319 91.0
DYD3_k127_5876467_34 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.0000000000000121 84.0
DYD3_k127_5876467_4 Tfp pilus assembly protein tip-associated adhesin - - - 6.199e-196 629.0
DYD3_k127_5876467_5 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 621.0
DYD3_k127_5876467_6 Aminoglycoside phosphotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 581.0
DYD3_k127_5876467_7 PFAM acyl-CoA dehydrogenase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007727 576.0
DYD3_k127_5876467_8 beta-keto acid cleavage enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 552.0
DYD3_k127_5876467_9 Activates fatty acids by binding to coenzyme A K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 546.0
DYD3_k127_5891350_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 3.841e-278 879.0
DYD3_k127_5891350_1 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000476 530.0
DYD3_k127_5891350_2 ATPase (AAA K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 417.0
DYD3_k127_5891350_3 Preprotein translocase subunit YajC K03210 - - 0.00000000000000000000000000000001015 131.0
DYD3_k127_5891350_4 Major facilitator superfamily - - - 0.000005754 49.0
DYD3_k127_5895516_0 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 528.0
DYD3_k127_5895516_1 EamA-like transporter family K15268 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009482 252.0
DYD3_k127_5895516_2 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000004529 261.0
DYD3_k127_5895516_3 COG0518 GMP synthase - Glutamine amidotransferase domain K01951 - 6.3.5.2 0.000000000000000000000000000001171 125.0
DYD3_k127_5895516_4 - - - - 0.0000000000000000000000005772 109.0
DYD3_k127_5907489_0 MgtE intracellular N domain K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 435.0
DYD3_k127_5907489_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 376.0
DYD3_k127_5907489_2 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007463 279.0
DYD3_k127_5907489_3 phosphoesterase, PA-phosphatase related K19302 - 3.6.1.27 0.0000000000000000002405 104.0
DYD3_k127_5910203_0 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 491.0
DYD3_k127_5910203_1 CHASE2 K01768,K01769 - 4.6.1.1,4.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 397.0
DYD3_k127_5910203_2 Transcriptional regulator K19591,K19592 - - 0.0000000000000000000000000000000000000000000002975 181.0
DYD3_k127_5951970_0 GMC oxidoreductase K00108 - 1.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 569.0
DYD3_k127_5951970_1 ABC transporter K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 510.0
DYD3_k127_5951970_10 PFAM response regulator receiver - - - 0.000000000000000001125 91.0
DYD3_k127_5951970_11 Ribonuclease B OB domain K03704 - - 0.00000000000000287 76.0
DYD3_k127_5951970_12 EF-hand domain pair - - - 0.0000000000001774 79.0
DYD3_k127_5951970_2 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 502.0
DYD3_k127_5951970_3 COG2931 RTX toxins and related Ca2 -binding proteins K01406 - 3.4.24.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 481.0
DYD3_k127_5951970_4 ABC-type transport system, periplasmic component surface lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006728 446.0
DYD3_k127_5951970_5 Transport permease protein K01992 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 413.0
DYD3_k127_5951970_6 aminotransferase K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 353.0
DYD3_k127_5951970_7 Branched-chain amino acid aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 293.0
DYD3_k127_5951970_8 Protein of unknown function (DUF2834) - - - 0.000000000000000000000000000000000000006402 148.0
DYD3_k127_5961954_0 major facilitator superfamily K08218 - - 4.481e-198 632.0
DYD3_k127_5961954_1 Nitrite reductase K00368 - 1.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005646 519.0
DYD3_k127_5961954_2 Protein of unknown function - - - 0.000000000000000000000000000000000000000000000000000001915 205.0
DYD3_k127_5961954_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000664 150.0
DYD3_k127_5961954_4 pseudoazurin - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000000000000000000000000000000001139 150.0
DYD3_k127_5964568_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 549.0
DYD3_k127_5964568_1 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008228 391.0
DYD3_k127_5964568_2 LysR substrate-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 348.0
DYD3_k127_5964568_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 316.0
DYD3_k127_5964568_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000004676 260.0
DYD3_k127_5964568_5 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000001487 252.0
DYD3_k127_5984697_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 5e-243 764.0
DYD3_k127_5984697_1 PFAM Glycosyl hydrolase family 3 N terminal domain K01207,K05349 - 3.2.1.21,3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 363.0
DYD3_k127_5984697_2 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009085 304.0
DYD3_k127_5984697_3 COG1994 Zn-dependent proteases - - - 0.0000000000000000000000000000000000000000000000002886 183.0
DYD3_k127_5984697_4 Sporulation related domain - - - 0.00000000000000000006696 102.0
DYD3_k127_5989122_0 ABC transporter C-terminal domain K15738 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 - 2.984e-260 815.0
DYD3_k127_5989122_1 Transcriptional regulator K00375 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 535.0
DYD3_k127_5989122_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 491.0
DYD3_k127_5989122_3 DoxX K18305 - - 0.00000000000000000000000000000000000000000000000000004392 191.0
DYD3_k127_5989122_4 Bacterial regulatory proteins, tetR family K09017 - - 0.000000000000002894 85.0
DYD3_k127_5989122_5 - - - - 0.000000000000003508 90.0
DYD3_k127_5989122_6 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000009717 77.0
DYD3_k127_5989122_7 Belongs to the UPF0754 family - - - 0.000000000006365 77.0
DYD3_k127_5991198_0 Cellulose synthase K00694,K20541 - 2.4.1.12 0.0 1334.0
DYD3_k127_5991198_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.0 1225.0
DYD3_k127_5991198_2 AcrB/AcrD/AcrF family K07789 - - 0.0 1094.0
DYD3_k127_5991198_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006928 305.0
DYD3_k127_5991198_4 COG0477 Permeases of the major facilitator superfamily K08151 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002995 312.0
DYD3_k127_5991198_5 cellulose synthase operon protein YhjQ - - - 0.0000000000000000000000000000000000000000000000000000000000008016 218.0
DYD3_k127_5991198_6 Cellulose synthase operon protein C C-terminus (BCSC_C) K20543 - - 0.000000000000000000001204 106.0
DYD3_k127_5991580_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 7.406e-245 762.0
DYD3_k127_5991580_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 5.05e-231 724.0
DYD3_k127_5991580_2 Belongs to the heat shock protein 70 family K04045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 567.0
DYD3_k127_5991580_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000005588 234.0
DYD3_k127_5991580_4 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000001014 132.0
DYD3_k127_5991580_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000006944 124.0
DYD3_k127_5991580_6 Cold shock K03704 - - 0.00000000000000000000000001027 111.0
DYD3_k127_5991580_7 - - - - 0.00000000000000000000000006914 108.0
DYD3_k127_5991580_8 response to abiotic stimulus - - - 0.0001773 53.0
DYD3_k127_6010330_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 454.0
DYD3_k127_6010330_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005425 365.0
DYD3_k127_6010330_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001486 275.0
DYD3_k127_6010330_3 transcriptional - - - 0.00000000000000000000000000000000000000000000000000000000000005022 217.0
DYD3_k127_6029099_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 1.137e-215 687.0
DYD3_k127_6029099_1 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000000000000000123 213.0
DYD3_k127_6048156_0 AAA domain, putative AbiEii toxin, Type IV TA system K10021 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 406.0
DYD3_k127_6048156_1 PFAM extracellular solute-binding protein, family 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 352.0
DYD3_k127_6048156_2 histidine utilization repressor K05836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 340.0
DYD3_k127_6048156_3 Binding-protein-dependent transport system inner membrane component K10020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 326.0
DYD3_k127_6048156_4 Binding-protein-dependent transport system inner membrane component K10019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 321.0
DYD3_k127_6048156_5 PFAM phenylalanine histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000573 225.0
DYD3_k127_6110582_0 MMPL family K07003 - - 0.0 1101.0
DYD3_k127_6110582_1 Protein of unknown function (DUF1302) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004401 524.0
DYD3_k127_6110582_2 Protein of unknown function (DUF1329) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004745 483.0
DYD3_k127_6110582_3 Photosynthesis system II assembly factor YCF48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 297.0
DYD3_k127_6150110_0 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 1.228e-284 896.0
DYD3_k127_6150110_1 Phosphoribulokinase K00855 - 2.7.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 486.0
DYD3_k127_6150110_2 Belongs to the phosphoglycerate kinase family K00927 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007306 495.0
DYD3_k127_6150110_3 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 419.0
DYD3_k127_6150110_4 transcriptional regulator K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 385.0
DYD3_k127_6150110_5 carbohydrate phosphatase activity K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 372.0
DYD3_k127_6150110_6 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000002422 176.0
DYD3_k127_618133_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 5.825e-200 629.0
DYD3_k127_618133_1 Sigma-54 interaction domain K21405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 411.0
DYD3_k127_618133_2 methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000105 287.0
DYD3_k127_618133_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000938 281.0
DYD3_k127_618133_4 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006552 251.0
DYD3_k127_618133_5 transcriptional - - - 0.000000000000000000000000000000000003766 142.0
DYD3_k127_618133_6 Branched-chain amino acid transport system / permease component K01998 - - 0.0000201 55.0
DYD3_k127_6188955_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 512.0
DYD3_k127_6188955_1 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005305 396.0
DYD3_k127_6188955_2 OmpW family K07275 - - 0.000000000000000000000000000000000000000000000000000000000000004591 224.0
DYD3_k127_6188955_3 HupE / UreJ protein K03192 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000001053 184.0
DYD3_k127_6188955_4 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000000000000000000008597 155.0
DYD3_k127_6212223_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 8.989e-195 615.0
DYD3_k127_6212223_1 transhydrogenase subunit alpha K00324 GO:0000166,GO:0003674,GO:0003824,GO:0003957,GO:0005215,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0008746,GO:0008750,GO:0009117,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0016491,GO:0016651,GO:0016652,GO:0019362,GO:0019637,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0046983,GO:0048037,GO:0050662,GO:0051179,GO:0051186,GO:0051234,GO:0051287,GO:0055085,GO:0055086,GO:0055114,GO:0070403,GO:0070404,GO:0071704,GO:0072524,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 528.0
DYD3_k127_6212223_2 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 GO:0008150,GO:0008152,GO:0055114 1.6.1.2 0.00000000000000000000000000000000000008726 144.0
DYD3_k127_623024_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0 1055.0
DYD3_k127_623024_1 GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008628 573.0
DYD3_k127_623024_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000247 284.0
DYD3_k127_623024_3 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000003218 260.0
DYD3_k127_623024_4 transcriptional regulator, TetR family - - - 0.000000000000000000000000000000000000000000000002622 180.0
DYD3_k127_623024_5 Protein of unknown function (DUF2937) - - - 0.0000000000249 72.0
DYD3_k127_6238837_0 ATPases associated with a variety of cellular activities K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 437.0
DYD3_k127_6238837_1 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.00000000000000000000000000000000000000000000000000000000004169 214.0
DYD3_k127_6238837_2 Protein of unknown function (DUF2569) - - - 0.0000000000000000002524 93.0
DYD3_k127_6238837_3 - - - - 0.0000000000000002644 89.0
DYD3_k127_6242111_0 Uncharacterised conserved protein (DUF2156) K07027,K14205 - 2.3.2.3 1.228e-218 696.0
DYD3_k127_6242111_1 Putative serine dehydratase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 359.0
DYD3_k127_6242111_2 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000748 313.0
DYD3_k127_6242111_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002434 244.0
DYD3_k127_6242111_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005703 245.0
DYD3_k127_6242111_5 Bacterial virulence protein (VirJ) - - - 0.00000000000000000000000000000000000000000000000000000000001182 233.0
DYD3_k127_6242111_6 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000000000000000000000000000000000000002018 168.0
DYD3_k127_6242111_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000005108 160.0
DYD3_k127_6257637_0 Substrate binding domain of ABC-type glycine betaine transport system K15553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 415.0
DYD3_k127_6257637_1 Binding-protein-dependent transport system inner membrane component K15554 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 391.0
DYD3_k127_6257637_2 Belongs to the BI1 family K06890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 381.0
DYD3_k127_6257637_3 AntiSigma factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 309.0
DYD3_k127_6257637_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000018 280.0
DYD3_k127_6257637_5 the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000002607 233.0
DYD3_k127_6257637_6 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000002508 206.0
DYD3_k127_6257637_7 PFAM PhnA protein K06193 - - 0.0000000000000000000000000000009001 123.0
DYD3_k127_6257637_8 Uncharacterized protein conserved in bacteria (DUF2076) K09945 - - 0.00000000000000000000000005987 119.0
DYD3_k127_6257637_9 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000007091 98.0
DYD3_k127_6290654_0 Circularly permuted ATP-grasp type 2 - - - 2.6e-212 688.0
DYD3_k127_6290654_1 Transglutaminase/protease-like homologues - - - 0.0000000000000002759 92.0
DYD3_k127_6302691_0 COG1062 Zn-dependent alcohol dehydrogenases, class III K00055 - 1.1.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001985 459.0
DYD3_k127_6302691_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007028 274.0
DYD3_k127_6302691_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001907 267.0
DYD3_k127_6312964_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 5.084e-222 702.0
DYD3_k127_6312964_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 608.0
DYD3_k127_6312964_10 lipopolysaccharide 3-alpha-galactosyltransferase activity - - - 0.0000000000000000000000003274 123.0
DYD3_k127_6312964_11 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000009854 66.0
DYD3_k127_6312964_2 COG2230 Cyclopropane fatty acid synthase and related methyltransferases K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000795 458.0
DYD3_k127_6312964_3 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007358 403.0
DYD3_k127_6312964_4 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 379.0
DYD3_k127_6312964_5 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 351.0
DYD3_k127_6312964_6 Polysaccharide pyruvyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000004506 239.0
DYD3_k127_6312964_7 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000000001397 214.0
DYD3_k127_6312964_8 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000007896 161.0
DYD3_k127_6312964_9 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000000009977 143.0
DYD3_k127_63231_0 ABC-type multidrug transport system, ATPase and permease K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 570.0
DYD3_k127_63231_1 3-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007933 432.0
DYD3_k127_63231_10 hydroperoxide reductase activity - - - 0.00000000000000000000000006753 121.0
DYD3_k127_63231_11 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000009354 94.0
DYD3_k127_63231_2 KR domain K00019 - 1.1.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 350.0
DYD3_k127_63231_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 320.0
DYD3_k127_63231_4 aspartate racemase K01779 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007168 308.0
DYD3_k127_63231_5 Belongs to the inositol monophosphatase superfamily K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001003 279.0
DYD3_k127_63231_6 Tyrosine phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002471 255.0
DYD3_k127_63231_7 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000003821 252.0
DYD3_k127_63231_8 Transcriptional K05800 - - 0.00000000000000000000000000000000000000000000000000000000000004786 216.0
DYD3_k127_63231_9 protein conserved in bacteria K09778 - - 0.000000000000000000000000000000000000000000000000000001727 200.0
DYD3_k127_6334304_0 Aldo/keto reductase family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0017144,GO:0034641,GO:0042723,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:1901360,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 466.0
DYD3_k127_6334304_1 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 375.0
DYD3_k127_6334304_2 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.00000000000000001109 86.0
DYD3_k127_6358531_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 2.679e-194 625.0
DYD3_k127_6358531_1 cytochrome c oxidase subunit III K02276 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 407.0
DYD3_k127_6358531_10 Insulinase (Peptidase family M16) - - - 0.0000000000000000005251 89.0
DYD3_k127_6358531_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 370.0
DYD3_k127_6358531_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 301.0
DYD3_k127_6358531_4 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.000000000000000000000000000000000000000000000000000000000000000000000000002725 257.0
DYD3_k127_6358531_5 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003791 258.0
DYD3_k127_6358531_6 Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I K02258 - - 0.0000000000000000000000000000000000000000000000000000000000001397 220.0
DYD3_k127_6358531_7 SURF1-like protein K14998 - - 0.000000000000000000000000000000000000000000000000000000000007649 219.0
DYD3_k127_6358531_8 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000000000000000000000000000000000000000002994 188.0
DYD3_k127_6358531_9 Protein of unknown function (DUF983) - - - 0.000000000000000000000000000002894 124.0
DYD3_k127_6412892_0 COG1884 Methylmalonyl-CoA mutase, N-terminal domain subunit K14447 - 5.4.99.63 0.0 1011.0
DYD3_k127_6412892_1 Acyl-CoA dehydrogenase, C-terminal domain K14448 - 1.3.8.12 1.107e-245 769.0
DYD3_k127_6412892_10 MAPEG family - - - 0.000000000000000000000000009454 117.0
DYD3_k127_6412892_11 Ankyrin repeat - - - 0.0001427 51.0
DYD3_k127_6412892_2 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K14446 - 1.3.1.85 1.263e-240 747.0
DYD3_k127_6412892_3 Major Facilitator Superfamily - - - 5.752e-204 642.0
DYD3_k127_6412892_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 291.0
DYD3_k127_6412892_5 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005533 263.0
DYD3_k127_6412892_6 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000000000000000000006055 241.0
DYD3_k127_6412892_7 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000149 152.0
DYD3_k127_6412892_8 Zinc-binding dehydrogenase K00001,K13953 - 1.1.1.1 0.000000000000000000000000000002699 122.0
DYD3_k127_6412892_9 Thioesterase superfamily - - - 0.000000000000000000000000001357 123.0
DYD3_k127_6425040_0 Acyl-CoA dehydrogenase, N-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007248 497.0
DYD3_k127_6425040_1 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009091 415.0
DYD3_k127_6425040_2 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 343.0
DYD3_k127_6425040_3 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 306.0
DYD3_k127_6425040_4 PFAM Carboxymuconolactone decarboxylase - - - 0.0000000000000000000000000000000000000000000002681 175.0
DYD3_k127_6425040_5 membrane K08987 - - 0.00000000000000000000000000000000002411 147.0
DYD3_k127_6427383_0 Protein of unknown function DUF115 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 330.0
DYD3_k127_6427383_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K06602 - - 0.000000000000000000000000000000001029 135.0
DYD3_k127_6427383_2 Flagellar protein FlbT K06601 - - 0.000000000000000000000002197 108.0
DYD3_k127_6427383_3 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000000009119 92.0
DYD3_k127_6427383_4 Tetratricopeptide TPR_2 repeat protein - - - 0.0000004302 63.0
DYD3_k127_643079_0 PFAM 2-nitropropane dioxygenase NPD K00459,K02371 - 1.13.12.16,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 400.0
DYD3_k127_643079_1 Enoyl-CoA hydratase/isomerase K08299 - 4.2.1.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 372.0
DYD3_k127_643079_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001732 296.0
DYD3_k127_643079_3 Phenazine biosynthesis-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001734 276.0
DYD3_k127_643079_4 In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media - - - 0.0000000000000000000000000000000000000000000000000000000002795 209.0
DYD3_k127_643079_5 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.000000000000000000000000000000000000000000000000000003088 203.0
DYD3_k127_643079_6 helix_turn_helix gluconate operon transcriptional repressor - - - 0.00000000000000000000000000034 116.0
DYD3_k127_6431249_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 2.038e-255 812.0
DYD3_k127_6431249_1 Acyl-CoA dehydrogenase, C-terminal domain K11731 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 554.0
DYD3_k127_6431249_2 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 537.0
DYD3_k127_6431249_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 343.0
DYD3_k127_6431249_4 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000000000006064 190.0
DYD3_k127_6431249_5 pathogenesis - - - 0.00003763 52.0
DYD3_k127_646492_0 Sodium Bile acid symporter family K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 571.0
DYD3_k127_646492_1 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002406 279.0
DYD3_k127_646492_2 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008133 263.0
DYD3_k127_646492_3 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000000000000003446 138.0
DYD3_k127_647581_0 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 428.0
DYD3_k127_647581_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006096 329.0
DYD3_k127_647581_2 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005076 319.0
DYD3_k127_647581_3 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 320.0
DYD3_k127_647581_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007791 254.0
DYD3_k127_647581_5 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000006876 162.0
DYD3_k127_6479507_0 Cysteine-rich domain - - - 1.934e-217 681.0
DYD3_k127_6479507_1 Curli production assembly/transport component CsgG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 319.0
DYD3_k127_6479507_2 Putative bacterial lipoprotein (DUF799) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002875 270.0
DYD3_k127_6479507_3 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000005866 239.0
DYD3_k127_6479507_4 Uncharacterized protein conserved in bacteria (DUF2239) K09965 - - 0.0000000000000000000000000000000000000000000000000000000000000007366 224.0
DYD3_k127_6479507_5 Glycerol acyltransferase - - - 0.000000000000000000000000000000008239 132.0
DYD3_k127_6479507_6 Domain of unknown function (DUF4810) - - - 0.0000000000000000000000001242 111.0
DYD3_k127_6488039_0 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 507.0
DYD3_k127_6488039_1 dipeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005037 394.0
DYD3_k127_6488039_10 Tetracenomycin c synthesis protein - - - 0.000000000000000000000000000000000002311 150.0
DYD3_k127_6488039_2 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 327.0
DYD3_k127_6488039_3 sugar phosphatases of the HAD superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008012 269.0
DYD3_k127_6488039_4 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000000000000000002489 216.0
DYD3_k127_6488039_5 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000004547 215.0
DYD3_k127_6488039_6 chemotaxis protein K03414 - - 0.0000000000000000000000000000000000000000000000000000000001474 214.0
DYD3_k127_6488039_7 N-terminal half of MaoC dehydratase K17865 - 4.2.1.55 0.00000000000000000000000000000000000000000000000000000001055 201.0
DYD3_k127_6488039_8 Exopolysaccharide synthesis, ExoD - - - 0.000000000000000000000000000000000000000000000000000002261 197.0
DYD3_k127_6488039_9 protein conserved in bacteria K09790 - - 0.000000000000000000000000000000000000001178 152.0
DYD3_k127_6497952_0 Belongs to the ABC transporter superfamily K13896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008675 610.0
DYD3_k127_6497952_1 Extracellular solute-binding protein K13893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 604.0
DYD3_k127_6497952_2 transport system, permease component K13894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 494.0
DYD3_k127_6497952_3 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 443.0
DYD3_k127_6497952_4 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 353.0
DYD3_k127_6497952_5 NlpC/P60 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000157 246.0
DYD3_k127_6497952_6 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.000000000000000000007821 106.0
DYD3_k127_6497952_8 Tetratricopeptide repeat - - - 0.0002482 51.0
DYD3_k127_6497952_9 - - - - 0.000392 44.0
DYD3_k127_6513054_0 Dehydrogenase K17723 GO:0003674,GO:0003824,GO:0003954,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 4.624e-239 743.0
DYD3_k127_6513054_1 L-lysine 6-monooxygenase (NADPH-requiring) K07222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 589.0
DYD3_k127_6513054_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K17722 - 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 563.0
DYD3_k127_6513054_3 Peptidase family M20/M25/M40 K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000000000000000001377 222.0
DYD3_k127_6513054_4 flavoprotein involved in K transport - - - 0.00000000602 57.0
DYD3_k127_6517231_0 Permease family K03458 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006186 406.0
DYD3_k127_6517231_1 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 402.0
DYD3_k127_6517231_2 Periplasmic component of amino acid ABC-type transporter signal transduction system K02030 - - 0.00000000000000000000000000000000000000000000000000000000007766 216.0
DYD3_k127_6517231_3 amino acid transport - - - 0.00000000000000000000000000000000000000000000000001284 200.0
DYD3_k127_6517231_4 STAS domain K06378 - - 0.000000000000000000000000002716 114.0
DYD3_k127_6517231_5 Histidine kinase-like ATPase domain - - - 0.0000000000000007089 91.0
DYD3_k127_6523831_0 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 306.0
DYD3_k127_6523831_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02113,K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000006041 131.0
DYD3_k127_6523831_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000001682 123.0
DYD3_k127_654489_0 Flavin-binding monooxygenase-like - - - 4.444e-229 715.0
DYD3_k127_654489_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006546 278.0
DYD3_k127_654489_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004818 268.0
DYD3_k127_654489_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000001771 239.0
DYD3_k127_654489_4 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000001943 200.0
DYD3_k127_654489_5 Uncharacterized protein conserved in bacteria (DUF2272) - - - 0.0000000000000000002179 99.0
DYD3_k127_654489_6 heat shock protein DnaJ K05516 - - 0.0000000000000000002418 88.0
DYD3_k127_654489_7 MerR HTH family regulatory protein K18997 - - 0.00000000000000001249 89.0
DYD3_k127_6550889_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.0 1097.0
DYD3_k127_6550889_1 Belongs to the HypD family K04654 - - 3.062e-216 682.0
DYD3_k127_6550889_10 - - - - 0.0000000000003476 71.0
DYD3_k127_6550889_11 - - - - 0.00003364 46.0
DYD3_k127_6550889_2 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 511.0
DYD3_k127_6550889_3 hydrogenase expression formation protein K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 529.0
DYD3_k127_6550889_4 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 470.0
DYD3_k127_6550889_5 Rieske-like [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 418.0
DYD3_k127_6550889_6 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 346.0
DYD3_k127_6550889_7 HupF/HypC family K04653 - - 0.0000000000000000000000000000000000000000001625 160.0
DYD3_k127_6550889_8 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.00000000000000000000003137 101.0
DYD3_k127_6550889_9 - - - - 0.000000000000000000002029 102.0
DYD3_k127_6551575_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K13252 - 2.1.3.3,2.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 539.0
DYD3_k127_6551575_1 Amino acid kinase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762 400.0
DYD3_k127_6551575_2 Arginine K01478 - 3.5.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 379.0
DYD3_k127_6551575_3 Transcriptional regulatory protein K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 325.0
DYD3_k127_6551575_4 - - - - 0.000000000000006998 81.0
DYD3_k127_6552265_0 penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 5.461e-268 845.0
DYD3_k127_6552265_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 509.0
DYD3_k127_6552265_2 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000001687 173.0
DYD3_k127_6552265_3 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000001749 106.0
DYD3_k127_6563724_0 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 407.0
DYD3_k127_6563724_1 ABC-type molybdate transport system, permease component K02018 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 325.0
DYD3_k127_6563724_2 Protein of unknown function (DUF3422) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002494 284.0
DYD3_k127_6563724_3 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000007811 255.0
DYD3_k127_6563724_4 Helix-turn-helix domain - - - 0.0000000000000000000000002686 109.0
DYD3_k127_6563724_5 PFAM thioesterase superfamily - - - 0.0000000000003505 70.0
DYD3_k127_6565040_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 0.0 1092.0
DYD3_k127_6565040_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008731 481.0
DYD3_k127_6565040_10 - - - - 0.0002986 51.0
DYD3_k127_6565040_2 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 392.0
DYD3_k127_6565040_3 AraC-type transcriptional regulator N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 374.0
DYD3_k127_6565040_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 357.0
DYD3_k127_6565040_5 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000001127 267.0
DYD3_k127_6565040_6 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000004684 233.0
DYD3_k127_6565040_7 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000002426 185.0
DYD3_k127_6565040_8 Antibiotic biosynthesis monooxygenase - - - 0.00000000000004307 80.0
DYD3_k127_6565040_9 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000006121 64.0
DYD3_k127_6565607_0 3-oxo-5-alpha-steroid 4-dehydrogenase K12343 - 1.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 393.0
DYD3_k127_6565607_2 membrane - - - 0.00000000000000000000000000000000000000000001796 166.0
DYD3_k127_6565607_3 Regulator - - - 0.00000000000000000000000000000000002935 140.0
DYD3_k127_6565607_4 acyl-CoA dehydrogenase activity - - - 0.000000000001034 74.0
DYD3_k127_6565607_5 Aconitase C-terminal domain K01703 - 4.2.1.33,4.2.1.35 0.00004156 46.0
DYD3_k127_6573078_0 ABC-type multidrug transport system ATPase and permease K02021 - - 6.987e-231 745.0
DYD3_k127_6573078_1 PFAM Xanthine uracil vitamin C permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 471.0
DYD3_k127_6573078_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 308.0
DYD3_k127_6573078_3 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000003904 182.0
DYD3_k127_6573078_4 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000008093 176.0
DYD3_k127_6573078_5 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000001205 117.0
DYD3_k127_6573078_6 Permease family - - - 0.000000000000001218 80.0
DYD3_k127_6578245_0 AMP-binding enzyme C-terminal domain K00666,K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 612.0
DYD3_k127_6578245_1 beta (1-6) glucans synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 362.0
DYD3_k127_6578245_2 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.000000000000001973 79.0
DYD3_k127_6591824_0 Alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 574.0
DYD3_k127_6591824_1 Predicted metal-dependent hydrolase K07044 - - 0.0000000000000000000000000000000000000000000000000000000000000000002787 247.0
DYD3_k127_6591824_2 LysE type translocator - - - 0.00000000000000000000000000000000000000003241 160.0
DYD3_k127_6591824_3 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 0.000000000000000000000000000001201 124.0
DYD3_k127_6591824_4 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000004239 117.0
DYD3_k127_6591824_5 transcriptional regulator - - - 0.000000000000000000000001074 113.0
DYD3_k127_6591824_6 negative regulation of translational initiation - - - 0.000000000000000000009966 100.0
DYD3_k127_6599232_0 glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 496.0
DYD3_k127_6599232_1 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 501.0
DYD3_k127_6599232_10 Protein of unknown function (DUF1778) - - - 0.000000000000000000000000000000000000002847 147.0
DYD3_k127_6599232_11 LTXXQ motif family protein - - - 0.00000000000000000000000000000000002419 142.0
DYD3_k127_6599232_12 YceI-like domain - - - 0.0000000000000000000000000000004183 130.0
DYD3_k127_6599232_13 Cytochrome b/b6/petB K12262 - - 0.000000000000000000000001781 110.0
DYD3_k127_6599232_14 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000001979 65.0
DYD3_k127_6599232_2 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005177 464.0
DYD3_k127_6599232_3 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007043 364.0
DYD3_k127_6599232_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007345 359.0
DYD3_k127_6599232_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 335.0
DYD3_k127_6599232_6 -acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 286.0
DYD3_k127_6599232_7 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000001033 239.0
DYD3_k127_6599232_8 Protein conserved in bacteria K09769 - - 0.00000000000000000000000000000000000000000000000000000000002202 209.0
DYD3_k127_6599232_9 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000001517 159.0
DYD3_k127_6606857_0 Belongs to the DNA photolyase family K01669 - 4.1.99.3 2.52e-197 627.0
DYD3_k127_6606857_1 NAD FAD-binding protein K06954 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 496.0
DYD3_k127_6606857_2 Mycolic acid cyclopropane synthetase K00574 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0008825,GO:0009987,GO:0016740,GO:0016741,GO:0030258,GO:0032259,GO:0044237,GO:0044238,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0071704 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 465.0
DYD3_k127_6606857_3 MFS/sugar transport protein K03292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008585 362.0
DYD3_k127_6606857_4 Protein of unknown function (DUF1365) K09701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001302 275.0
DYD3_k127_6606857_5 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001152 255.0
DYD3_k127_6606857_6 relative of glutathione S-transferase, MAPEG superfamily K07136 - - 0.00000000000000000000000004777 115.0
DYD3_k127_6619656_0 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 332.0
DYD3_k127_6619656_1 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000002287 188.0
DYD3_k127_6626876_0 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 385.0
DYD3_k127_6626876_1 Cytochrome c oxidase subunit III K02164 - - 0.000000000000000000000000000000000000000000004087 169.0
DYD3_k127_6626876_2 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.0000009131 57.0
DYD3_k127_6633941_0 ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 357.0
DYD3_k127_6633941_1 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 340.0
DYD3_k127_6633941_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000004351 124.0
DYD3_k127_6635966_0 WD40 repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000002826 241.0
DYD3_k127_6635966_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000002307 176.0
DYD3_k127_6635966_2 Cobalamin synthesis protein cobW C-terminal domain - - - 0.00000000000002064 73.0
DYD3_k127_6641767_0 Bacterial extracellular solute-binding protein K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 447.0
DYD3_k127_6641767_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000008322 179.0
DYD3_k127_6646793_0 FAD binding domain - - - 6.027e-261 819.0
DYD3_k127_6646793_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 1.562e-219 701.0
DYD3_k127_6646793_10 hydratase K02554 - 4.2.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 357.0
DYD3_k127_6646793_11 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004468 286.0
DYD3_k127_6646793_12 COG5285 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin K21195 - 1.14.11.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000502 267.0
DYD3_k127_6646793_13 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004624 246.0
DYD3_k127_6646793_14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001969 248.0
DYD3_k127_6646793_15 Family of unknown function (DUF1028) - - - 0.00000000000000000000000000000000000000000000000009273 184.0
DYD3_k127_6646793_16 GntR family transcriptional regulator K11475 - - 0.0000000000000000000000000000001193 134.0
DYD3_k127_6646793_17 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000831 90.0
DYD3_k127_6646793_2 Dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 587.0
DYD3_k127_6646793_3 4-hydroxyphenylacetate K00483,K14534 - 1.14.14.9,4.2.1.120,5.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 552.0
DYD3_k127_6646793_4 Protein of unknown function (DUF971) K00471 - 1.14.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 503.0
DYD3_k127_6646793_5 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 448.0
DYD3_k127_6646793_6 Amidohydrolase K07045,K14333,K22213 - 4.1.1.46,4.1.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008524 450.0
DYD3_k127_6646793_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 446.0
DYD3_k127_6646793_8 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 404.0
DYD3_k127_6646793_9 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 357.0
DYD3_k127_6652658_0 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 510.0
DYD3_k127_6652658_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 407.0
DYD3_k127_6652658_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 307.0
DYD3_k127_6652658_3 Autotransporter beta-domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 284.0
DYD3_k127_6652658_4 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004457 253.0
DYD3_k127_6652658_5 Protein of unknown function (DUF1194) - - - 0.000000000000000000000000000000000000000000000000000000004466 207.0
DYD3_k127_6652658_6 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000003731 103.0
DYD3_k127_6655407_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 533.0
DYD3_k127_6655407_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007791 444.0
DYD3_k127_6655407_2 Aminoglycoside phosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 411.0
DYD3_k127_6655407_3 Transcriptional regulator K10913 - - 0.00000000000000000005966 105.0
DYD3_k127_6680000_0 Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 428.0
DYD3_k127_6680000_1 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 398.0
DYD3_k127_6680000_2 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K20454 - 4.1.3.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 357.0
DYD3_k127_6680000_3 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 342.0
DYD3_k127_6680000_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004796 267.0
DYD3_k127_6680000_5 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000000000000000000001372 229.0
DYD3_k127_6680000_6 arsR family - - - 0.00000000000000000000000000000000000000004089 155.0
DYD3_k127_6680000_7 MarR family - - - 0.000000000000000000000000000000000000103 146.0
DYD3_k127_6680000_8 Protein of unknown function (DUF2384) - - - 0.000000000000000000000000000000000005281 141.0
DYD3_k127_6680000_9 RES - - - 0.000000000000000003019 93.0
DYD3_k127_6681508_0 Methane/Phenol/Toluene Hydroxylase K16242 - - 1.671e-273 852.0
DYD3_k127_6681508_1 Oxidoreductase FAD-binding domain K16246 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009123 467.0
DYD3_k127_6681508_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K00446 - 1.13.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006052 444.0
DYD3_k127_6681508_3 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 436.0
DYD3_k127_6681508_4 Methane/Phenol/Toluene Hydroxylase K16243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006099 425.0
DYD3_k127_6681508_5 Phenol hydroxylase conserved region K16245 - - 0.00000000000000000000000000000000000006091 146.0
DYD3_k127_6681508_6 MmoB/DmpM family K16244 - - 0.00000000000000000000000000004869 119.0
DYD3_k127_6681508_7 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000004094 94.0
DYD3_k127_6682890_0 Oligopeptide/dipeptide transporter, C-terminal region - - - 7.981e-239 749.0
DYD3_k127_6682890_1 Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K05685 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 520.0
DYD3_k127_6682890_2 TIGRFAM efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 433.0
DYD3_k127_6682890_3 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 417.0
DYD3_k127_6682890_4 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 383.0
DYD3_k127_6682890_5 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 325.0
DYD3_k127_6682890_6 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 333.0
DYD3_k127_6682890_7 HD phosphohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004259 264.0
DYD3_k127_6699360_0 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 417.0
DYD3_k127_6699360_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 349.0
DYD3_k127_6699360_2 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 315.0
DYD3_k127_6700343_0 Haemolysin-type calcium-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 395.0
DYD3_k127_6700343_1 helix_turn_helix ASNC type K03719 - - 0.0000000000000000000000000000000000000000002122 164.0
DYD3_k127_6700343_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000581 149.0
DYD3_k127_6700343_3 Domain of unknown function (DUF4345) - - - 0.00000000000000000000000005438 111.0
DYD3_k127_671011_0 Aminotransferase class-III - - - 5.799e-211 671.0
DYD3_k127_671011_1 TOBE domain K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 471.0
DYD3_k127_671011_2 Binding-protein-dependent transport system inner membrane component K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 426.0
DYD3_k127_671011_3 Binding-protein-dependent transport system inner membrane component K11071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 419.0
DYD3_k127_671011_4 Required for the activity of the bacterial periplasmic transport system of putrescine K11069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007061 307.0
DYD3_k127_6716000_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 487.0
DYD3_k127_6716000_1 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 366.0
DYD3_k127_6716000_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 362.0
DYD3_k127_6716000_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 315.0
DYD3_k127_6716000_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009526 293.0
DYD3_k127_6716000_5 2-hydroxychromene-2-carboxylate isomerase K14584 - 5.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000009291 257.0
DYD3_k127_6716000_6 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.00000000000000000000000000000000000000000000000001562 192.0
DYD3_k127_6716000_7 transcriptional regulator K16137 - - 0.00000000000000000000000000000000000000003611 158.0
DYD3_k127_6716000_8 Transcriptional regulator, TetR family - - - 0.00000000000000000000000004464 117.0
DYD3_k127_6716000_9 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.0000000000000000002228 90.0
DYD3_k127_6718422_0 PFAM peptidase M16 domain protein K07263 - - 4.498e-277 882.0
DYD3_k127_6718422_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 305.0
DYD3_k127_6718422_2 Pyrophosphatase - - - 0.00000000000000000000000006366 110.0
DYD3_k127_6730318_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 5.979e-232 724.0
DYD3_k127_6730318_1 Amino acid permease K03294,K16238 - - 4.347e-217 679.0
DYD3_k127_6730318_2 Aldehyde dehydrogenase family - - - 6.622e-197 629.0
DYD3_k127_6730318_3 Iron-containing alcohol dehydrogenase K00001,K00043 - 1.1.1.1,1.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 520.0
DYD3_k127_6730318_4 Peptidase C26 K01951 - 6.3.5.2 0.0000000000000007507 81.0
DYD3_k127_6732038_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 8.202e-259 815.0
DYD3_k127_6732038_1 GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 463.0
DYD3_k127_6732038_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 356.0
DYD3_k127_6732038_3 MatE K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 310.0
DYD3_k127_6732038_4 Class II aldolase adducin family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003582 260.0
DYD3_k127_6732038_5 PFAM Taurine catabolism dioxygenase TauD TfdA K03119 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000006708 215.0
DYD3_k127_6732038_6 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.000000000000000000000000000000000000000000002944 187.0
DYD3_k127_6738224_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 6.911e-199 639.0
DYD3_k127_6738224_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 449.0
DYD3_k127_6738224_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000203 283.0
DYD3_k127_6738224_3 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000007237 141.0
DYD3_k127_6738224_4 - - - - 0.0000000000001811 79.0
DYD3_k127_6738224_5 HAD-hyrolase-like - - - 0.0008684 44.0
DYD3_k127_6750223_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 1.894e-274 865.0
DYD3_k127_6750223_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006264 270.0
DYD3_k127_6750223_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000009826 227.0
DYD3_k127_6750223_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000001088 167.0
DYD3_k127_6750223_4 - - - - 0.0000000000000168 76.0
DYD3_k127_6752780_0 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 457.0
DYD3_k127_6752780_1 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000000000000000000000002406 229.0
DYD3_k127_6752780_2 NADH dehydrogenase K00356 - 1.6.99.3 0.00000000000000000000000000000000000000000002173 169.0
DYD3_k127_6752780_3 DoxX - - - 0.000000000000000000000000000000000000113 154.0
DYD3_k127_6752780_4 Thioredoxin-like [2Fe-2S] ferredoxin K00127 - - 0.00000000000000000000000000000000002828 137.0
DYD3_k127_6754103_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18989 - - 0.0 1150.0
DYD3_k127_6754103_1 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005524 332.0
DYD3_k127_6754103_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007627 304.0
DYD3_k127_6754103_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 292.0
DYD3_k127_6754103_4 Barrel-sandwich domain of CusB or HlyD membrane-fusion K18990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 299.0
DYD3_k127_6754103_5 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000000000004054 175.0
DYD3_k127_6754103_6 Ribonuclease B OB domain K03704 - - 0.0000000000000000000002094 104.0
DYD3_k127_675451_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006718 602.0
DYD3_k127_675451_1 helix_turn_helix gluconate operon transcriptional repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 560.0
DYD3_k127_675451_10 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000163 235.0
DYD3_k127_675451_11 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000003701 193.0
DYD3_k127_675451_13 flavoprotein involved in K transport - - - 0.000000000000008306 76.0
DYD3_k127_675451_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01502 - 3.5.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 503.0
DYD3_k127_675451_3 Peptidase family S58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000419 494.0
DYD3_k127_675451_4 AIR synthase related protein, C-terminal domain K07123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005172 429.0
DYD3_k127_675451_5 ABC transporter K05847 GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0031460,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0072337 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 378.0
DYD3_k127_675451_6 Binding-protein-dependent transport system inner membrane component K05846 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0016020,GO:0031460,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0072337 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 317.0
DYD3_k127_675451_7 PFAM DsrE DsrF-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 303.0
DYD3_k127_675451_8 Binding-protein-dependent transport system inner membrane component K05845,K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 293.0
DYD3_k127_675451_9 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004102 269.0
DYD3_k127_6755331_0 Rieske 2Fe-2S K15982 GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0005506,GO:0006066,GO:0006629,GO:0006694,GO:0006706,GO:0006707,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008610,GO:0009056,GO:0009058,GO:0009405,GO:0009987,GO:0010033,GO:0014070,GO:0016042,GO:0016043,GO:0016125,GO:0016127,GO:0016491,GO:0016705,GO:0016709,GO:0022607,GO:0033993,GO:0036200,GO:0036314,GO:0042221,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044238,GO:0044281,GO:0044282,GO:0044419,GO:0046164,GO:0046872,GO:0046914,GO:0047086,GO:0048037,GO:0050292,GO:0050896,GO:0051259,GO:0051260,GO:0051536,GO:0051537,GO:0051540,GO:0051704,GO:0055114,GO:0065003,GO:0070206,GO:0070207,GO:0070723,GO:0071704,GO:0071840,GO:0097305,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901700,GO:1902652 1.14.13.142 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005549 471.0
DYD3_k127_6755331_1 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 407.0
DYD3_k127_6755331_2 NmrA-like family K19267 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 354.0
DYD3_k127_6755331_3 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000001944 186.0
DYD3_k127_6755331_4 SpoVT / AbrB like domain K07172 - - 0.00000000002605 66.0
DYD3_k127_6758350_0 Saccharopine dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 389.0
DYD3_k127_6758350_1 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 342.0
DYD3_k127_6758350_2 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 291.0
DYD3_k127_6758350_3 cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002905 280.0
DYD3_k127_6758350_4 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000007577 164.0
DYD3_k127_6758350_5 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000002746 115.0
DYD3_k127_6774632_0 Hemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 449.0
DYD3_k127_6774632_1 PFAM GumN family protein K09973 - - 0.0000000000000000000000000000000000000000000000000000000000000000001298 240.0
DYD3_k127_6774632_2 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.000000000000000000000000000000000000000000000000000000000000000001653 231.0
DYD3_k127_6774632_3 SNARE associated Golgi protein K01077 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000006361 199.0
DYD3_k127_6774632_4 bond formation protein, DsbB - - - 0.000000000000000000000000000000000001187 152.0
DYD3_k127_6774632_5 Peptidase M10 serralysin C terminal - - - 0.0000000000000000000000000003253 120.0
DYD3_k127_6798337_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 4.27e-220 688.0
DYD3_k127_6798337_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000004422 254.0
DYD3_k127_6801454_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 2.751e-197 619.0
DYD3_k127_6801454_1 Fic/DOC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 534.0
DYD3_k127_6801454_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000002442 180.0
DYD3_k127_6801454_3 Belongs to the ArsC family K00537 - 1.20.4.1 0.000000000005743 69.0
DYD3_k127_6815463_0 PFAM ABC transporter related K13926 - - 0.0 1319.0
DYD3_k127_6815463_1 Peptidase family M41 K03798 - - 4.515e-310 962.0
DYD3_k127_6815463_10 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 327.0
DYD3_k127_6815463_11 Succinyl-CoA ligase like flavodoxin domain K09181 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008517 301.0
DYD3_k127_6815463_12 Arginine K01478 - 3.5.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006675 292.0
DYD3_k127_6815463_13 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002243 246.0
DYD3_k127_6815463_14 PFAM UspA domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002926 229.0
DYD3_k127_6815463_15 COG1247 Sortase and related acyltransferases K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000000000004214 210.0
DYD3_k127_6815463_16 - - - - 0.0000000000000000000000000000000000005575 143.0
DYD3_k127_6815463_2 Amino acid permease K03758 - - 6.967e-253 787.0
DYD3_k127_6815463_3 Zn-dependent alcohol dehydrogenases K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 593.0
DYD3_k127_6815463_4 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 541.0
DYD3_k127_6815463_5 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 535.0
DYD3_k127_6815463_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 450.0
DYD3_k127_6815463_7 PFAM secretion protein HlyD family protein K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007712 426.0
DYD3_k127_6815463_8 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 407.0
DYD3_k127_6815463_9 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 335.0
DYD3_k127_6821699_0 Zn-dependent proteases and their inactivated homologs K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 539.0
DYD3_k127_6821699_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 372.0
DYD3_k127_6821699_2 - - - - 0.00000000000000000000000000000000002431 150.0
DYD3_k127_6821699_3 Belongs to the inositol monophosphatase superfamily K01092 - 3.1.3.25 0.00000008567 58.0
DYD3_k127_6821699_4 Epoxide hydrolase N terminus - - - 0.00009953 54.0
DYD3_k127_6829615_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 439.0
DYD3_k127_6829615_1 Belongs to the binding-protein-dependent transport system permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 403.0
DYD3_k127_6833323_0 PAS fold - - - 0.0 1240.0
DYD3_k127_6833323_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 5.087e-301 933.0
DYD3_k127_6833323_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 568.0
DYD3_k127_6833323_3 Toxic anion resistance protein (TelA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004862 445.0
DYD3_k127_6833323_4 von Willebrand factor type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 391.0
DYD3_k127_6833323_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004512 389.0
DYD3_k127_6833323_6 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002073 247.0
DYD3_k127_6833323_7 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000005363 215.0
DYD3_k127_6833323_8 - - - - 0.0000000000179 68.0
DYD3_k127_6833591_0 Amidohydrolase family - - - 0.0 1090.0
DYD3_k127_6833591_1 aminotransferase class I and II - - - 2.236e-242 755.0
DYD3_k127_6833591_10 Protein of unknown function (DUF1427) - - - 0.000000000000000000000000000001327 126.0
DYD3_k127_6833591_2 Transmembrane secretion effector - - - 1.155e-227 717.0
DYD3_k127_6833591_3 Long-chain fatty acid--CoA ligase K02182 - 6.2.1.48 8.292e-213 673.0
DYD3_k127_6833591_4 COG2070 Dioxygenases related to 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 571.0
DYD3_k127_6833591_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 452.0
DYD3_k127_6833591_6 PFAM regulatory protein LysR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 455.0
DYD3_k127_6833591_7 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 367.0
DYD3_k127_6833591_8 DoxX - - - 0.00000000000000000000000000000000000000000000000003958 186.0
DYD3_k127_6833591_9 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000007301 133.0
DYD3_k127_685027_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1405.0
DYD3_k127_685027_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 603.0
DYD3_k127_685027_10 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000001685 235.0
DYD3_k127_685027_11 MaoC like domain - - - 0.0000000000000000000000000000000000000000000000000000000005163 205.0
DYD3_k127_685027_12 WHG domain - - - 0.0000000000000000000000000000000000000000000002045 175.0
DYD3_k127_685027_13 Protein of unknown function (DUF3592) - - - 0.00000000001311 72.0
DYD3_k127_685027_14 Nuclear transport factor 2 (NTF2) domain K01822 - 5.3.3.1 0.000000000068 68.0
DYD3_k127_685027_15 Protein of unknown function (DUF3592) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000002323 62.0
DYD3_k127_685027_2 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 529.0
DYD3_k127_685027_3 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 430.0
DYD3_k127_685027_4 COG1042 Acyl-CoA synthetase (NDP forming) K09181 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 436.0
DYD3_k127_685027_5 Belongs to the HAD-like hydrolase superfamily. PhnX family K05306 - 3.11.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 340.0
DYD3_k127_685027_6 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 337.0
DYD3_k127_685027_7 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 312.0
DYD3_k127_685027_8 Acetoacetate decarboxylase (ADC) K01574 - 4.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 313.0
DYD3_k127_685027_9 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005062 294.0
DYD3_k127_6860677_0 amino acid K16238 - - 3.166e-270 840.0
DYD3_k127_6860677_1 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 464.0
DYD3_k127_6860677_2 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008785 409.0
DYD3_k127_6860677_3 Belongs to the precorrin methyltransferase family K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004897 339.0
DYD3_k127_6860677_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 330.0
DYD3_k127_6860677_5 PIN domain - - - 0.0000000000000000000000000000000008321 134.0
DYD3_k127_6860677_6 TIGRFAM looped-hinge helix DNA binding domain, AbrB family - - - 0.000000000000000000003779 95.0
DYD3_k127_6860677_7 Fe-S protein K06938 - - 0.00000000000000007795 81.0
DYD3_k127_6860677_8 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000201 60.0
DYD3_k127_6874948_0 NnrU protein - - - 0.000000000000000000000000000000000000000000000000001045 207.0
DYD3_k127_6874948_1 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000004571 167.0
DYD3_k127_6875522_0 Putative Tad-like Flp pilus-assembly - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 376.0
DYD3_k127_6875522_1 Membrane - - - 0.0000000000000000000000000000000000000000002574 174.0
DYD3_k127_6875522_2 N-formylglutamate amidohydrolase - - - 0.00000000000000000000000000000000003218 138.0
DYD3_k127_6875522_3 TadE-like protein - - - 0.000000000003508 73.0
DYD3_k127_6885757_0 Flavoprotein involved in K transport - - - 5.179e-264 820.0
DYD3_k127_6885757_1 PFAM Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 412.0
DYD3_k127_6885757_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005255 299.0
DYD3_k127_6885757_3 response to abiotic stimulus - - - 0.000000000000000000000000000000000000000000000007232 189.0
DYD3_k127_6885757_4 response to abiotic stimulus - - - 0.00000000000000000000000000000000000005832 158.0
DYD3_k127_6889940_0 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 375.0
DYD3_k127_6889940_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 339.0
DYD3_k127_6889940_2 Integral membrane protein (DUF2244) - - - 0.000000000000000000000000000000000000003945 161.0
DYD3_k127_6912455_0 Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations K01241 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008714,GO:0016787,GO:0016798,GO:0016799,GO:0044424,GO:0044444,GO:0044464 3.2.2.4 3.253e-244 762.0
DYD3_k127_6912455_1 membrane K12340 - - 0.0000000000000000000000000000000000000000000000000000000000003099 230.0
DYD3_k127_6912455_2 transcriptional regulator - - - 0.00000000000000000000004162 105.0
DYD3_k127_6912455_3 Bacterial regulatory proteins, tetR family - - - 0.000000000000000002763 93.0
DYD3_k127_6918100_0 Allophanate hydrolase subunit 2 K01941 - 6.3.4.6 0.0 1388.0
DYD3_k127_6918100_1 Amidase K01457 - 3.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 571.0
DYD3_k127_6925932_0 argininosuccinate lyase K01755 - 4.3.2.1 2.464e-202 649.0
DYD3_k127_6925932_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 581.0
DYD3_k127_6925932_2 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000679 138.0
DYD3_k127_6925932_3 Domain of unknown function (DUF4175) - - - 0.000000000000000127 85.0
DYD3_k127_6926065_0 UDP binding domain K02474 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 563.0
DYD3_k127_6926065_1 UDP-glucuronic acid epimerase K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 469.0
DYD3_k127_6926065_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 325.0
DYD3_k127_6926065_3 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 312.0
DYD3_k127_6926065_4 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000001634 188.0
DYD3_k127_6926065_5 Preprotein translocase subunit SecG K03075 - - 0.0000000000000000000001944 102.0
DYD3_k127_6928938_0 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 1.277e-318 987.0
DYD3_k127_6928938_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 8.14e-290 902.0
DYD3_k127_6928938_10 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334,K03943 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001154 280.0
DYD3_k127_6928938_11 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001148 256.0
DYD3_k127_6928938_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000001048 161.0
DYD3_k127_6928938_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 2.144e-243 762.0
DYD3_k127_6928938_3 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 5.474e-222 701.0
DYD3_k127_6928938_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 2.524e-202 636.0
DYD3_k127_6928938_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 571.0
DYD3_k127_6928938_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005317 507.0
DYD3_k127_6928938_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009289 315.0
DYD3_k127_6928938_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008661 307.0
DYD3_k127_6928938_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007392 283.0
DYD3_k127_694348_0 Sodium:solute symporter family - - - 1.971e-236 742.0
DYD3_k127_694348_1 Methane phenol toluene hydroxylase K16157 - 1.14.13.25 3.781e-214 678.0
DYD3_k127_694348_2 Luciferase-like monooxygenase K20938 - 1.14.14.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008937 306.0
DYD3_k127_694348_3 PFAM Methane phenol toluene hydroxylase K16158 - 1.14.13.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 290.0
DYD3_k127_694348_4 - - - - 0.00000000000004254 78.0
DYD3_k127_6952403_0 Substrate binding domain of ABC-type glycine betaine transport system K02002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 524.0
DYD3_k127_6952403_1 ATPases associated with a variety of cellular activities K02000 - 3.6.3.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 480.0
DYD3_k127_6952403_2 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00042 - 1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 447.0
DYD3_k127_6952403_3 DeoR C terminal sensor domain K02444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005496 338.0
DYD3_k127_6952403_4 ABC-type proline glycine betaine transport system permease component K02001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004268 274.0
DYD3_k127_6952403_5 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.000000000000000000000000000000000000000000000117 171.0
DYD3_k127_6970056_0 aminopeptidase K01262 - 3.4.11.9 1.672e-202 650.0
DYD3_k127_6970056_1 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000001063 196.0
DYD3_k127_6970056_2 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.000000000000000000000000000000000001321 159.0
DYD3_k127_6970056_3 Protein of unknown function (DUF1348) K09958 - - 0.0000000002618 61.0
DYD3_k127_6981024_0 Amidohydrolase family K01464 - 3.5.2.2 1.833e-242 762.0
DYD3_k127_6981024_1 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 614.0
DYD3_k127_6981024_2 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 551.0
DYD3_k127_6981024_3 Amidase, hydantoinase carbamoylase family K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004174 502.0
DYD3_k127_6981024_4 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 432.0
DYD3_k127_6981024_5 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 421.0
DYD3_k127_6981024_6 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 415.0
DYD3_k127_6981024_7 COG4665 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000000000000000000000000000000000000000000000001396 195.0
DYD3_k127_6990812_0 carbohydrate binding K07336 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 330.0
DYD3_k127_6990812_1 PFAM MotA TolQ ExbB proton channel - - - 0.00000000000000000000000000000000000000000000000000000001015 208.0
DYD3_k127_6990812_2 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.00000000000000000000000000000000000000001439 157.0
DYD3_k127_6990812_3 receptor K16090 - - 0.00001336 48.0
DYD3_k127_6992421_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 2.761e-315 974.0
DYD3_k127_6992421_1 B3/4 domain K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 8.927e-267 843.0
DYD3_k127_6992421_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 530.0
DYD3_k127_6992421_3 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 334.0
DYD3_k127_6992421_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000002715 183.0
DYD3_k127_6992421_5 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000275 165.0
DYD3_k127_6992421_6 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000000000000003737 114.0
DYD3_k127_6995953_0 Tripartite tricarboxylate transporter TctA family K07793 - - 2.787e-216 680.0
DYD3_k127_6995953_1 cobalamin synthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005983 433.0
DYD3_k127_6995953_2 Protein conserved in bacteria K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 362.0
DYD3_k127_6995953_3 Hemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 346.0
DYD3_k127_6995953_4 SapC - - - 0.000000000000000000000000000000000000000000000000001932 190.0
DYD3_k127_6995953_5 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000001911 85.0
DYD3_k127_6995953_6 CHASE2 K01768,K01769 - 4.6.1.1,4.6.1.2 0.00000009747 57.0
DYD3_k127_6995953_7 - - - - 0.0000002585 61.0
DYD3_k127_700687_0 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 352.0
DYD3_k127_700687_1 ABC-type dipeptide oligopeptide nickel transport systems, permease K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 333.0
DYD3_k127_700687_2 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.000000000000000000948 88.0
DYD3_k127_7009575_0 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 604.0
DYD3_k127_7009575_1 Oxidoreductase NAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 412.0
DYD3_k127_7009575_2 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 364.0
DYD3_k127_7009575_3 Uncharacterized protein conserved in bacteria (DUF2332) - - - 0.0000000000000000000000000000000000000000000000000000000002419 220.0
DYD3_k127_7009575_4 helix_turn_helix ASNC type K03719 - - 0.000000000000000000000000000000000000000006369 158.0
DYD3_k127_7009575_5 LysE type translocator - - - 0.00000000000000000000000000000002665 139.0
DYD3_k127_7009575_6 alpha beta - - - 0.00000000000000000000000001259 121.0
DYD3_k127_7009575_7 Isochorismatase family - - - 0.00000000002688 73.0
DYD3_k127_7026973_0 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 460.0
DYD3_k127_7026973_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 429.0
DYD3_k127_7026973_2 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 415.0
DYD3_k127_7026973_3 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003667 259.0
DYD3_k127_7026973_4 Transcriptional regulator - - - 0.00000000000000000000000000000000001942 144.0
DYD3_k127_7026973_5 Autoinducer synthase K18096 - 2.3.1.228,2.3.1.229 0.0000000000000000000000000004615 121.0
DYD3_k127_7026973_6 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000000005111 128.0
DYD3_k127_7031855_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 456.0
DYD3_k127_7031855_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.00000000000000000000000000000000616 134.0
DYD3_k127_7031855_2 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.00000000000000000005439 93.0
DYD3_k127_7031855_3 Plasmid stabilization system K19092 - - 0.0000000000000000004607 91.0
DYD3_k127_704672_0 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000869 489.0
DYD3_k127_704672_1 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 421.0
DYD3_k127_704672_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 397.0
DYD3_k127_704672_3 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004355 289.0
DYD3_k127_704672_4 HlyD family K01993 - - 0.000000000000000000000000000000000000000000000000000000000000005513 229.0
DYD3_k127_704672_5 Bacterial transcriptional repressor C-terminal - - - 0.000000000000000000000000000000000000000000000000000001521 199.0
DYD3_k127_704672_6 Protein of unknown function (DUF805) - - - 0.0000000000000000000002543 101.0
DYD3_k127_7060443_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 499.0
DYD3_k127_7060443_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 317.0
DYD3_k127_7060443_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.00000000000000000000000000000000000000001383 156.0
DYD3_k127_7060443_3 - - - - 0.00000000000000000000000000000000000002884 149.0
DYD3_k127_7060443_4 - - - - 0.000000000000000000000000000000000002575 141.0
DYD3_k127_7060443_5 Integrase core domain - - - 0.000000007852 57.0
DYD3_k127_7067942_0 NAD-specific glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1543.0
DYD3_k127_7067942_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 3.027e-228 717.0
DYD3_k127_7067942_2 Major facilitator superfamily K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 460.0
DYD3_k127_7067942_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006996 397.0
DYD3_k127_7067942_4 Phytanoyl-CoA dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 306.0
DYD3_k127_7067942_5 transcriptional - - - 0.000000000000000000000000000000000001504 141.0
DYD3_k127_7067942_6 COG1525 Micrococcal nuclease (thermonuclease) homologs - - - 0.0000000000000000000000000000000002848 147.0
DYD3_k127_7067942_7 - - - - 0.000000000000001096 81.0
DYD3_k127_7069318_0 FAD dependent oxidoreductase K00303,K22084 - 1.5.3.1,1.5.99.5 1.401e-234 728.0
DYD3_k127_7069318_1 Glutamine synthetase, catalytic domain K01915,K01949 - 6.3.1.2,6.3.4.12 1.42e-232 726.0
DYD3_k127_7069318_2 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K22083 - 2.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004603 274.0
DYD3_k127_7084143_0 amine oxidase K00466 - 1.13.12.3 7.068e-221 690.0
DYD3_k127_7084143_1 Lysophospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001792 273.0
DYD3_k127_7084143_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003652 235.0
DYD3_k127_7084143_3 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000006387 159.0
DYD3_k127_7088739_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 2.615e-257 803.0
DYD3_k127_7088739_1 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 590.0
DYD3_k127_7088739_2 Bacterial extracellular solute-binding protein K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 447.0
DYD3_k127_7088739_3 excinuclease, ATPase subunit - - - 0.000000000000000000001716 100.0
DYD3_k127_7088739_4 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K00851,K01057 - 2.7.1.12,3.1.1.31 0.0002378 45.0
DYD3_k127_7092179_0 Molecular chaperone. Has ATPase activity K04079 - - 3.962e-239 755.0
DYD3_k127_7092179_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 8.348e-205 642.0
DYD3_k127_7092179_2 Amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465 463.0
DYD3_k127_7092179_3 transcriptional regulator K21699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 393.0
DYD3_k127_7092179_4 - - - - 0.000000000002492 73.0
DYD3_k127_7094506_0 domain protein - - - 2.605e-272 871.0
DYD3_k127_7094506_1 Bacterial low temperature requirement A protein (LtrA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 502.0
DYD3_k127_7094506_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 396.0
DYD3_k127_7094506_3 - - - - 0.0000003613 63.0
DYD3_k127_7105367_0 COG2217 Cation transport ATPase K01533 - 3.6.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 591.0
DYD3_k127_7105367_1 cytochrome oxidase maturation protein - - - 0.0000000000837 68.0
DYD3_k127_7107509_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 481.0
DYD3_k127_7107509_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 470.0
DYD3_k127_7107509_2 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.0000000000003125 73.0
DYD3_k127_7113856_0 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 580.0
DYD3_k127_7113856_1 Holliday junction DNA helicase ruvB C-terminus K03551 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 515.0
DYD3_k127_7113856_10 thioesterase' K07107 - - 0.0000000000000000000000000000000000003804 146.0
DYD3_k127_7113856_11 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000004891 143.0
DYD3_k127_7113856_12 PFAM Excinuclease ABC, C subunit domain protein K07461 - - 0.0000000000000000000000000000002815 125.0
DYD3_k127_7113856_13 Membrane - - - 0.000000000000000000005188 104.0
DYD3_k127_7113856_2 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007138 351.0
DYD3_k127_7113856_3 COG0811 Biopolymer transport proteins K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 318.0
DYD3_k127_7113856_4 YmdB-like protein K09769 GO:0003674,GO:0003824,GO:0004112,GO:0004113,GO:0008081,GO:0016787,GO:0016788,GO:0042578 - 0.000000000000000000000000000000000000000000000000000000000000000000009327 235.0
DYD3_k127_7113856_5 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000085 208.0
DYD3_k127_7113856_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.000000000000000000000000000000000000000000000000000000003195 214.0
DYD3_k127_7113856_7 OmpA family K03640 - - 0.000000000000000000000000000000000000000000001762 176.0
DYD3_k127_7113856_8 Biopolymer transport protein K03559,K03560 - - 0.00000000000000000000000000000000000000000002287 165.0
DYD3_k127_7113856_9 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000001325 162.0
DYD3_k127_7118113_0 Two component transcriptional regulator, winged helix family K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 318.0
DYD3_k127_7118113_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 336.0
DYD3_k127_7118113_2 Cysteine rich repeat - - - 0.00000000003097 67.0
DYD3_k127_7118113_3 - - - - 0.0000001383 62.0
DYD3_k127_712506_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007177 578.0
DYD3_k127_712506_1 COG3263 NhaP-type Na H and K H antiporters with a unique C-terminal domain K11105 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 481.0
DYD3_k127_712506_2 Alpha/beta hydrolase family K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 454.0
DYD3_k127_712506_3 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 349.0
DYD3_k127_712506_4 PFAM Mg2 transporter protein CorA family protein K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 311.0
DYD3_k127_712506_5 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 288.0
DYD3_k127_7125457_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 452.0
DYD3_k127_7125457_1 Protein of unknown function (DUF3772) K05802 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006298 432.0
DYD3_k127_7125457_2 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 366.0
DYD3_k127_7125457_3 MltA-interacting protein MipA - - - 0.0000000000000000000000000000000000000000000000000000000000000005755 227.0
DYD3_k127_7125457_4 protein possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000000000000004971 165.0
DYD3_k127_7125457_5 protein, possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000002058 156.0
DYD3_k127_7125457_6 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.000000000001876 67.0
DYD3_k127_7127599_0 COG3243 Poly(3-hydroxyalkanoate) synthetase K03821 - - 5.29e-234 732.0
DYD3_k127_7127599_1 acyl-CoA dehydrogenase K16047 - 1.14.14.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 444.0
DYD3_k127_7127599_2 Serine aminopeptidase, S33 K22250 - 3.1.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004011 334.0
DYD3_k127_7127599_3 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K02613,K15983 - 1.14.13.142 0.00000000003951 64.0
DYD3_k127_7137725_0 siderophore receptor K02014 - - 1.684e-261 830.0
DYD3_k127_7137725_1 Domain of unknown function (DUF4880) K07165 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001495 278.0
DYD3_k127_7139101_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 6.034e-272 878.0
DYD3_k127_7139101_1 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 560.0
DYD3_k127_7139101_10 FCD - - - 0.00000000000000000000000000000000000000000000000000000000000000000003406 241.0
DYD3_k127_7139101_11 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000007481 211.0
DYD3_k127_7139101_12 FabA-like domain K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000005396 173.0
DYD3_k127_7139101_13 - - - - 0.00000000000000000000000000000000000000843 152.0
DYD3_k127_7139101_14 Phosphopantetheine attachment site - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000007409 143.0
DYD3_k127_7139101_15 - - - - 0.00000000000000000000000000000000000008229 149.0
DYD3_k127_7139101_16 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.000000000000000000000000000295 113.0
DYD3_k127_7139101_17 - - - - 0.0000000000000000001056 100.0
DYD3_k127_7139101_2 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 524.0
DYD3_k127_7139101_3 Zinc-binding dehydrogenase K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 418.0
DYD3_k127_7139101_4 Periplasmic binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 393.0
DYD3_k127_7139101_5 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004841 362.0
DYD3_k127_7139101_6 Beta-ketoacyl synthase, N-terminal domain K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007228 314.0
DYD3_k127_7139101_7 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 289.0
DYD3_k127_7139101_8 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002596 280.0
DYD3_k127_7139101_9 Dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003867 264.0
DYD3_k127_7143960_0 Luciferase-like monooxygenase K14733 - 1.14.13.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 498.0
DYD3_k127_7143960_1 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 424.0
DYD3_k127_7143960_2 Methyltransferase FkbM domain - - - 0.00000000002952 74.0
DYD3_k127_7156562_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1272.0
DYD3_k127_7156562_1 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 377.0
DYD3_k127_7156562_2 MarR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002796 260.0
DYD3_k127_7156562_3 PFAM Cupin 2 conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001879 246.0
DYD3_k127_7156562_4 COG2518 Protein-L-isoaspartate carboxylmethyltransferase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000006252 231.0
DYD3_k127_7156562_5 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000002209 221.0
DYD3_k127_7156562_6 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000001238 117.0
DYD3_k127_7156562_7 Rhodanese Homology Domain - - - 0.00000000000000000000000004482 113.0
DYD3_k127_7156562_8 protein conserved in bacteria K09991 - - 0.00000000000000000007068 98.0
DYD3_k127_7156562_9 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000244 78.0
DYD3_k127_7179265_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 589.0
DYD3_k127_7179265_1 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008902 370.0
DYD3_k127_7179265_2 Protein conserved in bacteria K09798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 299.0
DYD3_k127_7179265_3 COG4942 Membrane-bound metallopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002008 290.0
DYD3_k127_7179265_4 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000000463 223.0
DYD3_k127_7184414_0 acyl-CoA transferases carnitine dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 444.0
DYD3_k127_7184414_1 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002266 281.0
DYD3_k127_7184414_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000004518 169.0
DYD3_k127_759668_0 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 327.0
DYD3_k127_759668_1 PIN domain - - - 0.000000000000000000000000000000000000000000003873 171.0
DYD3_k127_759668_2 Stringent starvation protein B K09985 - - 0.000000000000000000002359 95.0
DYD3_k127_759668_3 Transcriptional regulator - - - 0.000000000000000009795 89.0
DYD3_k127_759668_4 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00334,K00335,K18331 - 1.12.1.3,1.6.5.3 0.0000000002361 63.0
DYD3_k127_761023_0 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K06158 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 1.889e-203 655.0
DYD3_k127_761023_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 430.0
DYD3_k127_761023_2 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000001355 240.0
DYD3_k127_761023_3 FES K03575 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000000000000003213 120.0
DYD3_k127_785334_0 COG0591 Na proline symporter - - - 3.003e-280 900.0
DYD3_k127_785334_1 Sugar (and other) transporter - - - 7.711e-274 851.0
DYD3_k127_785334_2 abc transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 373.0
DYD3_k127_785334_3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000101 231.0
DYD3_k127_785334_4 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000001567 134.0
DYD3_k127_787923_0 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 324.0
DYD3_k127_787923_1 MazG nucleotide pyrophosphohydrolase domain K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 318.0
DYD3_k127_787923_2 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000005364 231.0
DYD3_k127_816698_0 Dihydrodipicolinate synthetase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 429.0
DYD3_k127_816698_1 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 371.0
DYD3_k127_841613_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 4.752e-205 648.0
DYD3_k127_841613_1 Gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 304.0
DYD3_k127_841613_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002985 279.0
DYD3_k127_841613_3 FCD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005223 267.0
DYD3_k127_841613_4 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000003799 220.0
DYD3_k127_841613_5 LysR substrate binding domain K21699 - - 0.0000000000000000000000000000000000000000000000000000000000009258 222.0
DYD3_k127_841613_6 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000005606 177.0
DYD3_k127_841613_7 Sigma-70, region 4 K03088 - - 0.000000000000000000000004508 110.0
DYD3_k127_841613_8 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0004807 51.0
DYD3_k127_851764_0 AMP-binding enzyme K12508 - 6.2.1.34 1.813e-210 681.0
DYD3_k127_851764_1 Zinc-binding dehydrogenase K19745 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 427.0
DYD3_k127_851764_2 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006097 274.0
DYD3_k127_851764_3 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.000000000000000000000000000000000000000000000002501 180.0
DYD3_k127_851764_4 Histidine phosphotransferase C-terminal domain K13588 - - 0.000000000000000000000001378 109.0
DYD3_k127_851764_5 Protein of unknown function (DUF3553) - - - 0.000000000000000001453 87.0
DYD3_k127_856343_0 PFAM Carbamoyl-phosphate synthase L chain, ATP binding domain K01955 - 6.3.5.5 4.393e-265 827.0
DYD3_k127_856343_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000001138 224.0
DYD3_k127_856343_2 Protein of unknown function (DUF1178) - - - 0.0000000000000000000000000000000000000129 149.0
DYD3_k127_856343_3 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process - - - 0.000000001012 66.0
DYD3_k127_869794_0 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005869 488.0
DYD3_k127_869794_1 PFAM 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000712 449.0
DYD3_k127_869794_2 electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 454.0
DYD3_k127_869794_3 Electron transfer flavoprotein, beta subunit K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 400.0
DYD3_k127_885389_0 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 447.0
DYD3_k127_885389_1 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006487 346.0
DYD3_k127_885389_2 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006929 257.0
DYD3_k127_890681_0 MAPEG family - - - 0.00000000000000000000000000000000000000000000021 178.0
DYD3_k127_890681_1 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000004603 179.0
DYD3_k127_890681_2 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000002459 164.0
DYD3_k127_890681_3 LysR substrate binding domain K04761 - - 0.00000000000000000000000000000000001061 144.0
DYD3_k127_890681_4 Transcriptional regulator K13636 - - 0.000000001352 61.0
DYD3_k127_893216_0 Helicase associated domain (HA2) Add an annotation K03579 - 3.6.4.13 1.929e-252 805.0
DYD3_k127_893216_1 Protein of unknown function (DUF1036) - - - 0.00000000000000000000000000001839 122.0
DYD3_k127_893216_2 Trypsin-like serine protease K04775 - - 0.0000000000000000000000000001921 123.0
DYD3_k127_897052_0 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 555.0
DYD3_k127_897052_1 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007115 383.0
DYD3_k127_897052_2 D-isomer specific 2-hydroxyacid dehydrogenase K03778,K18916 - 1.1.1.28,1.20.1.1 0.000000000000000000000000000000000000000000000000000000001654 203.0
DYD3_k127_903354_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 488.0
DYD3_k127_903354_1 transcriptional regulator - - - 0.000000000000000000000000000000000004904 145.0
DYD3_k127_903354_2 Peptidase family M20/M25/M40 K06016 - 3.5.1.6,3.5.1.87 0.0000000000002662 72.0
DYD3_k127_904258_0 Type VI secretion system, TssF K11896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000547 423.0
DYD3_k127_904258_1 haemagglutination activity domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 400.0
DYD3_k127_904258_2 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 315.0
DYD3_k127_904258_3 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001089 297.0
DYD3_k127_904258_4 COG0500 SAM-dependent methyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001166 287.0
DYD3_k127_904258_5 - - - - 0.0000000000000000000000000000000000000000000000001675 192.0
DYD3_k127_904258_6 Protein conserved in bacteria K11895 - - 0.00000000000000000000000000000000000000000000002856 185.0
DYD3_k127_904258_7 Caspase domain - - - 0.000000001319 72.0
DYD3_k127_929552_0 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000003854 241.0
DYD3_k127_929552_1 YhhN family - - - 0.000000000000000000000000005713 120.0
DYD3_k127_93036_0 Belongs to the glycosyl hydrolase 18 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003918 266.0
DYD3_k127_93036_1 YadA-like membrane anchor domain K12342 - - 0.0001195 53.0
DYD3_k127_963073_0 alpha/beta hydrolase fold K01066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 334.0
DYD3_k127_963073_1 alpha/beta hydrolase fold K07019 - - 0.00000000000000000000000000000000000000000000000000000001312 205.0
DYD3_k127_963073_2 - - - - 0.000000000000000000000000000000000000000000000004551 175.0
DYD3_k127_963073_3 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000000000000003549 122.0
DYD3_k127_964033_0 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 438.0
DYD3_k127_964033_1 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001752 268.0
DYD3_k127_964033_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000002263 238.0
DYD3_k127_964033_3 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000001824 222.0
DYD3_k127_964033_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000008428 208.0
DYD3_k127_964033_5 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 6.3.4.18 0.0000000000000000001174 97.0
DYD3_k127_964033_6 Protein of unknown function (DUF465) - - - 0.000000000000002753 82.0
DYD3_k127_964033_7 response regulator - - - 0.00000003507 56.0
DYD3_k127_964033_8 Protein of unknown function (DUF465) - - - 0.00000004563 59.0
DYD3_k127_980027_0 Threonine synthase N terminus K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005909 571.0
DYD3_k127_980027_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 467.0
DYD3_k127_980027_2 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006644 387.0
DYD3_k127_980027_3 Protein of unknown function - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 413.0
DYD3_k127_980027_4 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004793 283.0
DYD3_k127_980027_5 - - - - 0.000000000000000000000000000000000000000000000000007408 187.0
DYD3_k127_982368_0 Methane/Phenol/Toluene Hydroxylase K15760,K18223 - 1.14.13.227,1.14.13.236 9.631e-268 829.0
DYD3_k127_982368_1 belongs to the aldehyde dehydrogenase family K10217 - 1.2.1.32,1.2.1.85 1.261e-248 773.0
DYD3_k127_982368_10 Outer membrane protein transport protein (OMPP1/FadL/TodX) - - - 0.0000000000000000000000000000000000000000000000021 184.0
DYD3_k127_982368_11 Rieske-like [2Fe-2S] domain K15762 - - 0.0000000000000000000000000000000000000000000008118 168.0
DYD3_k127_982368_12 Toluene-4-monooxygenase system protein B (TmoB) K15761 - 1.14.13.236 0.00000000000000000000000000001116 119.0
DYD3_k127_982368_13 MmoB/DmpM family K15763 - 1.14.13.236 0.0000000000000000000000000007713 121.0
DYD3_k127_982368_14 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000001545 69.0
DYD3_k127_982368_15 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.00000001012 63.0
DYD3_k127_982368_2 Methane/Phenol/Toluene Hydroxylase K15764 - 1.14.13.236 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 461.0
DYD3_k127_982368_4 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K19707 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 398.0
DYD3_k127_982368_5 Oxidoreductase FAD-binding domain K15765 - 1.18.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465 374.0
DYD3_k127_982368_6 hydratase' K02509,K02554 - 4.2.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 333.0
DYD3_k127_982368_7 4-oxalocrotonate decarboxylase K01617 - 4.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005488 334.0
DYD3_k127_982368_8 Amino acid ABC transporter substrate-binding protein K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000001151 238.0
DYD3_k127_982368_9 Amino Acid K02030 - - 0.000000000000000000000000000000000000000000000000005052 188.0
DYD3_k127_996874_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.687e-264 825.0
DYD3_k127_996874_1 peptidase U62, modulator of DNA gyrase K03568 - - 3.351e-225 706.0
DYD3_k127_996874_2 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 298.0
DYD3_k127_996874_3 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000434 109.0
DYD3_k127_996874_4 - - - - 0.00000000000000000001526 98.0