Overview

ID MAG01801
Name HKD2_bin.49
Sample SMP0047
Taxonomy
Kingdom Bacteria
Phylum Actinomycetota
Class Coriobacteriia
Order Anaerosomatales
Family PALSA-660
Genus
Species
Assembly information
Completeness (%) 85.07
Contamination (%) 1.87
GC content (%) 70.0
N50 (bp) 21,575
Genome size (bp) 1,503,655

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1350

Gene name Description KEGG GOs EC E-value Score Sequence
HKD2_k127_10118740_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1115.0
HKD2_k127_10118740_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.791e-204 643.0
HKD2_k127_10118740_10 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000007497 253.0
HKD2_k127_10118740_11 Protein of unknown function (DUF554) K07150 - - 0.00000000000000000000000000000000000000000000000000000000004732 213.0
HKD2_k127_10118740_12 Protein of unknown function (DUF1003) - - - 0.00000000000000000000000000000000000000000000000002218 183.0
HKD2_k127_10118740_13 peptidyl-prolyl isomerase K07533 - 5.2.1.8 0.000000000000000000000000000000001864 142.0
HKD2_k127_10118740_14 deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000008172 138.0
HKD2_k127_10118740_15 Redoxin K03564 - 1.11.1.15 0.000000000000000000003962 96.0
HKD2_k127_10118740_16 PFAM blue (type 1) copper domain protein - - - 0.0000000000000004537 87.0
HKD2_k127_10118740_17 Alkyl hydroperoxide reductase K03564 - 1.11.1.15 0.00000007512 55.0
HKD2_k127_10118740_18 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0001167 48.0
HKD2_k127_10118740_19 belongs to the nudix hydrolase family - - - 0.0001997 51.0
HKD2_k127_10118740_2 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006211 401.0
HKD2_k127_10118740_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 370.0
HKD2_k127_10118740_4 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 359.0
HKD2_k127_10118740_5 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 353.0
HKD2_k127_10118740_6 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 361.0
HKD2_k127_10118740_7 TIGRFAM MazG family protein K02428,K02499 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004384 305.0
HKD2_k127_10118740_8 PFAM 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005557 291.0
HKD2_k127_10118740_9 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008904 254.0
HKD2_k127_140563_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 2.923e-236 749.0
HKD2_k127_140563_1 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015935,GO:0016020,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.0000000000000000000000000000000229 127.0
HKD2_k127_140563_2 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000009833 81.0
HKD2_k127_1408760_0 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.0 1062.0
HKD2_k127_1408760_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 7.066e-277 874.0
HKD2_k127_1408760_10 PFAM AMP-dependent synthetase and ligase K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001521 282.0
HKD2_k127_1408760_11 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001505 282.0
HKD2_k127_1408760_12 Metal dependent phosphohydrolases with conserved 'HD' motif. K09163 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004526 249.0
HKD2_k127_1408760_13 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002866 243.0
HKD2_k127_1408760_14 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016829,GO:0016840,GO:0016843,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0071496,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000001746 237.0
HKD2_k127_1408760_15 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000805 236.0
HKD2_k127_1408760_16 Protein of unknown function (DUF3048) C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000002308 212.0
HKD2_k127_1408760_17 PFAM Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000002712 180.0
HKD2_k127_1408760_18 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000003859 176.0
HKD2_k127_1408760_19 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.000000000000000000000000000000000000000000002568 170.0
HKD2_k127_1408760_2 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 496.0
HKD2_k127_1408760_20 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000001307 169.0
HKD2_k127_1408760_21 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides - - - 0.0000000000000000000000000000000000000193 155.0
HKD2_k127_1408760_22 Uncharacterized protein family UPF0016 - - - 0.00000000000000000000000000000000001077 145.0
HKD2_k127_1408760_23 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000000000000001503 132.0
HKD2_k127_1408760_24 SMART phosphoesterase PHP domain protein - - - 0.0000000000000000000000000000001775 134.0
HKD2_k127_1408760_25 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000001026 120.0
HKD2_k127_1408760_26 superoxide reductase activity K05919 - 1.15.1.2 0.00000000000000007971 87.0
HKD2_k127_1408760_27 Preprotein translocase K03210 - - 0.000000000000002244 79.0
HKD2_k127_1408760_28 peptidase M48, Ste24p - - - 0.0009024 51.0
HKD2_k127_1408760_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 496.0
HKD2_k127_1408760_4 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008139 416.0
HKD2_k127_1408760_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005037 392.0
HKD2_k127_1408760_6 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 383.0
HKD2_k127_1408760_7 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 341.0
HKD2_k127_1408760_8 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 326.0
HKD2_k127_1408760_9 Prolipoprotein diacylglyceryl transferase K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 292.0
HKD2_k127_1433654_0 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007192 499.0
HKD2_k127_1433654_1 Amino acid kinase family K00926 - 2.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 295.0
HKD2_k127_1433654_10 calcium- and calmodulin-responsive adenylate cyclase activity K08372 - - 0.000000000000000000000000000005484 134.0
HKD2_k127_1433654_11 - - - - 0.0000000000000000000001035 103.0
HKD2_k127_1433654_12 Tetracyclin repressor, C-terminal all-alpha domain - - - 0.000000000000000000006975 100.0
HKD2_k127_1433654_13 - - - - 0.00000000000000000006039 99.0
HKD2_k127_1433654_14 Uncharacterized ACR, COG1430 K09005 - - 0.00000000002303 74.0
HKD2_k127_1433654_2 DegV family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005384 258.0
HKD2_k127_1433654_3 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000001227 228.0
HKD2_k127_1433654_4 TIGRFAM degV family protein - - - 0.00000000000000000000000000000000000000000000000000000000004792 218.0
HKD2_k127_1433654_5 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000002992 210.0
HKD2_k127_1433654_6 Flavodoxin domain K00230 - 1.3.5.3 0.0000000000000000000000000000000000000000002759 167.0
HKD2_k127_1433654_7 calcium- and calmodulin-responsive adenylate cyclase activity K08372 - - 0.000000000000000000000000000000000000001961 158.0
HKD2_k127_1433654_8 Protein of unknown function (DUF2089) - - - 0.0000000000000000000000000000000000005045 143.0
HKD2_k127_1433654_9 GyrI-like small molecule binding domain - - - 0.0000000000000000000000000000000001485 138.0
HKD2_k127_1437130_0 ABC transporter K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006194 499.0
HKD2_k127_1437130_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 403.0
HKD2_k127_1437130_2 electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon- concentration K05582 - 1.6.5.3 0.00000000000000000000000000000000000000000000000001917 189.0
HKD2_k127_1437130_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000001698 128.0
HKD2_k127_1437130_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00330 - 1.6.5.3 0.00000000000000005566 87.0
HKD2_k127_1437130_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000001182 82.0
HKD2_k127_1769284_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 4.924e-308 970.0
HKD2_k127_1769284_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 601.0
HKD2_k127_1769284_2 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000222 287.0
HKD2_k127_1769284_3 Diguanylate cyclase phosphodiesterase with PAS PAC and GAF sensor(S) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003278 277.0
HKD2_k127_1769284_4 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000008712 190.0
HKD2_k127_1769284_5 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000001303 170.0
HKD2_k127_1769284_6 TrpR family protein YerC YecD - - - 0.000000000000000000000000005795 113.0
HKD2_k127_1769284_7 His Kinase A (phosphoacceptor) domain - - - 0.00000000002916 77.0
HKD2_k127_1849564_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 602.0
HKD2_k127_1849564_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004903 572.0
HKD2_k127_1849564_10 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000000001116 119.0
HKD2_k127_1849564_11 regulation of RNA biosynthetic process - - - 0.000000000000000000000000002698 118.0
HKD2_k127_1849564_12 Acetyltransferase (GNAT) domain - - - 0.000000000000000006061 88.0
HKD2_k127_1849564_13 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000296 78.0
HKD2_k127_1849564_14 RmlD substrate binding domain - - - 0.0000000000001041 78.0
HKD2_k127_1849564_2 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 484.0
HKD2_k127_1849564_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 376.0
HKD2_k127_1849564_4 carboxylic ester hydrolase activity K15357 - 3.5.1.106 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 329.0
HKD2_k127_1849564_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001878 276.0
HKD2_k127_1849564_6 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000001656 238.0
HKD2_k127_1849564_7 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000005375 191.0
HKD2_k127_1849564_8 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.00000000000000000000000000000000000000000000000000004833 196.0
HKD2_k127_1849564_9 Flavodoxin domain K00230 - 1.3.5.3 0.000000000000000000000000000000000005839 142.0
HKD2_k127_192098_0 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 561.0
HKD2_k127_192098_1 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000724 538.0
HKD2_k127_192098_10 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.000000000000000000000000000000000000000000000000000002459 220.0
HKD2_k127_192098_11 - - - - 0.00000000000000000000000000000000000000000000000000004774 202.0
HKD2_k127_192098_12 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000002313 176.0
HKD2_k127_192098_13 Major facilitator Superfamily K03291 - - 0.000000000000000000000000000000000000000005754 172.0
HKD2_k127_192098_14 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 K03775 - 5.2.1.8 0.0000000000000000000000000000000000000004811 154.0
HKD2_k127_192098_15 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000008955 165.0
HKD2_k127_192098_16 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress - - - 0.0000000000000000000000000000000000001441 160.0
HKD2_k127_192098_17 amidohydrolase K07045 - - 0.000000000000000000000000000000000005195 149.0
HKD2_k127_192098_18 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000001369 148.0
HKD2_k127_192098_19 Maf-like protein K06287 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000003995 128.0
HKD2_k127_192098_2 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 402.0
HKD2_k127_192098_20 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000005725 131.0
HKD2_k127_192098_21 TIGRFAM Ammonium transporter K03320 - - 0.00000000000000000000000006828 114.0
HKD2_k127_192098_22 acylphosphatase activity K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.000000000000000000003552 96.0
HKD2_k127_192098_23 lyase activity - - - 0.00000000000000001432 98.0
HKD2_k127_192098_24 acetyltransferase - GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747 - 0.00000000006262 75.0
HKD2_k127_192098_25 Phage-shock protein K03973 - - 0.0000000006881 68.0
HKD2_k127_192098_26 - - - - 0.000002312 59.0
HKD2_k127_192098_27 Transcriptional regulator - - - 0.0002306 49.0
HKD2_k127_192098_3 pfam abc K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 353.0
HKD2_k127_192098_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009371 301.0
HKD2_k127_192098_5 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002497 244.0
HKD2_k127_192098_6 Uncharacterised protein family (UPF0182) K09118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008442 244.0
HKD2_k127_192098_7 channel protein, hemolysin III family K11068 - - 0.00000000000000000000000000000000000000000000000000000000000000007134 231.0
HKD2_k127_192098_8 COG2041 Sulfite oxidase and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000221 239.0
HKD2_k127_192098_9 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000002504 205.0
HKD2_k127_1931731_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006787 574.0
HKD2_k127_1931731_1 ABC transporter, ATP-binding protein K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 456.0
HKD2_k127_1931731_10 UvrD REP helicase K03657,K07465 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006767 298.0
HKD2_k127_1931731_11 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009644 277.0
HKD2_k127_1931731_12 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007583 287.0
HKD2_k127_1931731_13 Predicted membrane protein (DUF2207) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001894 281.0
HKD2_k127_1931731_14 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001059 264.0
HKD2_k127_1931731_15 diacylglycerol kinase catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000000008351 244.0
HKD2_k127_1931731_16 phosphatase activity K07025 - - 0.00000000000000000000000000000000000000000000000001737 187.0
HKD2_k127_1931731_17 Protein of unknown function (DUF4080) K04034 - 1.21.98.3 0.0000000000000000000000000000000000000000000000001846 200.0
HKD2_k127_1931731_18 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000007397 183.0
HKD2_k127_1931731_19 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000009317 174.0
HKD2_k127_1931731_2 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009875 460.0
HKD2_k127_1931731_20 RecQ zinc-binding K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000006028 176.0
HKD2_k127_1931731_21 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000008073 175.0
HKD2_k127_1931731_22 SMART phosphoesterase PHP domain protein - - - 0.00000000000000000000000000000000000000008119 162.0
HKD2_k127_1931731_23 SMART protein phosphatase 2C domain protein - - - 0.0000000000000000000000000000000000000004344 173.0
HKD2_k127_1931731_24 Heavy metal transport detoxification protein - - - 0.00000000000000000000000000000000000074 155.0
HKD2_k127_1931731_25 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000000000006967 132.0
HKD2_k127_1931731_26 Belongs to the anti-sigma-factor antagonist family - - - 0.0000000000000000000000000000001672 134.0
HKD2_k127_1931731_27 EamA-like transporter family - - - 0.0000000000000000000000000000005781 136.0
HKD2_k127_1931731_28 PFAM Nitroreductase - - - 0.00000000000000000000000004825 115.0
HKD2_k127_1931731_29 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000007511 105.0
HKD2_k127_1931731_3 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 437.0
HKD2_k127_1931731_30 Domain of unknown function DUF302 - - - 0.00000000000000000268 90.0
HKD2_k127_1931731_31 mannose-ethanolamine phosphotransferase activity K05288 - - 0.0000000000000001359 94.0
HKD2_k127_1931731_32 Metal-sensitive transcriptional repressor K21600 - - 0.00000000000001432 80.0
HKD2_k127_1931731_33 Preprotein translocase SecG subunit K03075 - - 0.00000000000008366 75.0
HKD2_k127_1931731_34 UDP-N-acetylglucosamine LPS N-acetylglucosamine transferase K03429 GO:0003674,GO:0003824,GO:0008194,GO:0016740,GO:0016757,GO:0016758,GO:0035251,GO:0046527,GO:0047228 2.4.1.315 0.00000000005841 75.0
HKD2_k127_1931731_35 - - - - 0.0000000002473 66.0
HKD2_k127_1931731_36 Heavy-metal-associated domain K01533,K07213,K07496,K17686 - 3.6.3.4,3.6.3.54 0.00000009437 57.0
HKD2_k127_1931731_37 Elongator protein 3, MiaB family, Radical SAM K06139 - - 0.000005695 58.0
HKD2_k127_1931731_4 aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 431.0
HKD2_k127_1931731_5 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 389.0
HKD2_k127_1931731_6 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 343.0
HKD2_k127_1931731_7 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 310.0
HKD2_k127_1931731_8 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005721 305.0
HKD2_k127_1931731_9 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000492 291.0
HKD2_k127_2148941_0 heavy metal translocating P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 8.614e-277 866.0
HKD2_k127_2148941_1 Belongs to the glutamate synthase family K00265 - 1.4.1.13,1.4.1.14 3.306e-219 711.0
HKD2_k127_2148941_10 PFAM glutamate synthase alpha subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001912 286.0
HKD2_k127_2148941_11 Signal transduction histidine kinase K00936 GO:0000155,GO:0000160,GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005524,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002411 270.0
HKD2_k127_2148941_12 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005086 265.0
HKD2_k127_2148941_13 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000002644 234.0
HKD2_k127_2148941_14 Response regulator receiver K22010 GO:0000160,GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0016020,GO:0023052,GO:0030312,GO:0035556,GO:0040007,GO:0043167,GO:0043168,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000001539 231.0
HKD2_k127_2148941_15 TIGRFAM methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000009614 222.0
HKD2_k127_2148941_16 PFAM Class II aldolase K01628 - 4.1.2.17 0.000000000000000000000000000000000000000002372 164.0
HKD2_k127_2148941_17 HD domain - - - 0.000000000000000000000000000000000002338 154.0
HKD2_k127_2148941_18 D-glucuronyl C5-epimerase C-terminus - - - 0.000000000000000000005431 107.0
HKD2_k127_2148941_19 Cytochrome C oxidase, cbb3-type, subunit III K02275 - 1.9.3.1 0.00000000000000000007659 97.0
HKD2_k127_2148941_2 PFAM Cys Met metabolism K01740 - 2.5.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008083 553.0
HKD2_k127_2148941_20 transcriptional regulator, Rrf2 family - - - 0.000000000000005276 80.0
HKD2_k127_2148941_21 PBS lyase HEAT-like repeat - - - 0.000000000000008989 85.0
HKD2_k127_2148941_22 membrane - - - 0.0000000000001597 79.0
HKD2_k127_2148941_23 - - - - 0.000002139 60.0
HKD2_k127_2148941_24 Short C-terminal domain K08982 - - 0.0002171 48.0
HKD2_k127_2148941_3 Cys/Met metabolism PLP-dependent enzyme K01739,K01758 - 2.5.1.48,4.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000834 458.0
HKD2_k127_2148941_4 Glutamate synthase (NADPH) GltB1 subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 459.0
HKD2_k127_2148941_5 Pyridoxal-phosphate dependent enzyme K01697 - 4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009429 427.0
HKD2_k127_2148941_6 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 422.0
HKD2_k127_2148941_7 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009333,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 338.0
HKD2_k127_2148941_8 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008036 333.0
HKD2_k127_2148941_9 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 291.0
HKD2_k127_2197221_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1023.0
HKD2_k127_2197221_1 Phenylalanyl-tRNA synthetase, beta subunit K01890 - 6.1.1.20 5.933e-246 784.0
HKD2_k127_2197221_10 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000003593 129.0
HKD2_k127_2197221_11 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000004049 83.0
HKD2_k127_2197221_12 Peptidase S24-like K13280 - 3.4.21.89 0.000006525 57.0
HKD2_k127_2197221_2 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 523.0
HKD2_k127_2197221_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 482.0
HKD2_k127_2197221_4 PFAM Signal transduction histidine kinase, osmosensitive K channel sensor, N-terminal K07646 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006564 383.0
HKD2_k127_2197221_5 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 321.0
HKD2_k127_2197221_6 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005336 260.0
HKD2_k127_2197221_7 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031004,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 0.00000000000000000000000000000000000000000000000000000000001579 208.0
HKD2_k127_2197221_8 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000001004 184.0
HKD2_k127_2197221_9 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 - 3.6.3.12 0.0000000000000000000000000000000000000000000000009422 187.0
HKD2_k127_221567_0 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 576.0
HKD2_k127_221567_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 482.0
HKD2_k127_221567_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 433.0
HKD2_k127_221567_3 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 398.0
HKD2_k127_221567_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006158 326.0
HKD2_k127_221567_5 Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000005587 222.0
HKD2_k127_221567_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000008565 207.0
HKD2_k127_221567_7 Sirohaem synthase dimerisation region K02304 - 1.3.1.76,4.99.1.4 0.000000000000000000000000004673 119.0
HKD2_k127_221567_8 Cytochrome c assembly protein - - - 0.0000000004127 70.0
HKD2_k127_221567_9 Radical SAM domain protein K04070 - 1.97.1.4 0.00004849 48.0
HKD2_k127_2270203_0 Clp domain protein K03696 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0008150,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030312,GO:0040007,GO:0042802,GO:0042803,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0071944 - 0.0 1138.0
HKD2_k127_2270203_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 600.0
HKD2_k127_2270203_10 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000000001663 211.0
HKD2_k127_2270203_11 PFAM HD domain K03698 - - 0.0000000000000000000000000000000000000000000000000000002551 206.0
HKD2_k127_2270203_12 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.0000000000000000000000000000000000000000000000000000009216 200.0
HKD2_k127_2270203_13 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000007615 200.0
HKD2_k127_2270203_14 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000458 168.0
HKD2_k127_2270203_15 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000001094 110.0
HKD2_k127_2270203_16 Predicted membrane protein (DUF2085) - - - 0.0000000000000001344 88.0
HKD2_k127_2270203_17 NACHT domain - - - 0.0000000000000004961 92.0
HKD2_k127_2270203_18 protein folding in endoplasmic reticulum K19134 - - 0.0000000002355 71.0
HKD2_k127_2270203_19 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000001718 59.0
HKD2_k127_2270203_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 497.0
HKD2_k127_2270203_20 Evidence 5 No homology to any previously reported sequences - - - 0.00004127 47.0
HKD2_k127_2270203_3 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 423.0
HKD2_k127_2270203_4 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007574 368.0
HKD2_k127_2270203_5 Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation K07067 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 326.0
HKD2_k127_2270203_6 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000287 263.0
HKD2_k127_2270203_7 serine O-acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000009234 256.0
HKD2_k127_2270203_8 Belongs to the sigma-70 factor family K03091 - - 0.00000000000000000000000000000000000000000000000000000000000001014 223.0
HKD2_k127_2270203_9 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000001503 233.0
HKD2_k127_2280367_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 4.273e-216 682.0
HKD2_k127_2280367_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 4.114e-211 662.0
HKD2_k127_2280367_10 Histidine kinase K11527 - 2.7.13.3 0.0000000000000000000000000000001396 131.0
HKD2_k127_2280367_11 Tetracyclin repressor, C-terminal all-alpha domain - - - 0.00000000000000000000000001941 117.0
HKD2_k127_2280367_12 Flavodoxin domain K00230 - 1.3.5.3 0.000000000000000000000113 104.0
HKD2_k127_2280367_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009295 554.0
HKD2_k127_2280367_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 476.0
HKD2_k127_2280367_4 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 423.0
HKD2_k127_2280367_5 PFAM aminotransferase class V - GO:0001505,GO:0003674,GO:0003824,GO:0004760,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006807,GO:0008150,GO:0008152,GO:0008453,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019265,GO:0019752,GO:0042133,GO:0042136,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 402.0
HKD2_k127_2280367_6 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 391.0
HKD2_k127_2280367_7 Nadph-dependent fmn reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 330.0
HKD2_k127_2280367_8 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004899 266.0
HKD2_k127_2280367_9 ACT domain K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000002565 196.0
HKD2_k127_2526721_0 DNA topoisomerase K03168 - 5.99.1.2 2.989e-259 822.0
HKD2_k127_2526721_1 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005484 482.0
HKD2_k127_2526721_10 Belongs to the anti-sigma-factor antagonist family K04749 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000368 123.0
HKD2_k127_2526721_11 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.00000003086 66.0
HKD2_k127_2526721_12 Twin arginine-targeting protein translocase, TatA E family K03117,K03646 - - 0.00000009107 60.0
HKD2_k127_2526721_13 antisigma factor binding K04749,K17763,K20978 - - 0.000001109 56.0
HKD2_k127_2526721_14 Fumarate hydratase (Fumerase) K01677 - 4.2.1.2 0.000006552 54.0
HKD2_k127_2526721_15 Glycosyltransferase like family - - - 0.0003825 52.0
HKD2_k127_2526721_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 429.0
HKD2_k127_2526721_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009341 316.0
HKD2_k127_2526721_4 Hydrogenase accessory protein HypB K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 302.0
HKD2_k127_2526721_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002598 248.0
HKD2_k127_2526721_6 Fumarate hydratase (Fumerase) K01677 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000005626 202.0
HKD2_k127_2526721_7 PFAM metal-dependent phosphohydrolase, HD sub domain K06951 - - 0.00000000000000000000000000000000000000000000000000009204 191.0
HKD2_k127_2526721_8 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000007512 192.0
HKD2_k127_2526721_9 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.00000000000000000000000000000000001942 140.0
HKD2_k127_2579122_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.345e-224 713.0
HKD2_k127_2579122_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 1.579e-223 706.0
HKD2_k127_2579122_10 Polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000000000000000000000000000000000000002525 227.0
HKD2_k127_2579122_11 ACT domain K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000003489 224.0
HKD2_k127_2579122_12 calcium- and calmodulin-responsive adenylate cyclase activity K08372 - - 0.00000000000000000000000000000000007317 148.0
HKD2_k127_2579122_13 calcium- and calmodulin-responsive adenylate cyclase activity K08372 - - 0.000000000000000000000000000002666 134.0
HKD2_k127_2579122_14 - - - - 0.00000000000000005291 85.0
HKD2_k127_2579122_15 cell wall binding repeat - - - 0.0000000000000166 88.0
HKD2_k127_2579122_16 cell wall anchor domain - - - 0.00000002454 66.0
HKD2_k127_2579122_17 Pfam:N_methyl_2 - - - 0.0000009576 61.0
HKD2_k127_2579122_18 pilus assembly protein PilW - - - 0.000003688 59.0
HKD2_k127_2579122_19 Transcriptional regulatory protein, C terminal - - - 0.0001839 53.0
HKD2_k127_2579122_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005724 597.0
HKD2_k127_2579122_20 cyclic-guanylate-specific phosphodiesterase activity - - - 0.0009014 46.0
HKD2_k127_2579122_3 PFAM Pyruvate carboxyltransferase K02594 - 2.3.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 525.0
HKD2_k127_2579122_4 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006107 490.0
HKD2_k127_2579122_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007737 484.0
HKD2_k127_2579122_6 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 314.0
HKD2_k127_2579122_7 TipAS antibiotic-recognition domain K21744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 301.0
HKD2_k127_2579122_8 Histone deacetylase domain K04768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 305.0
HKD2_k127_2579122_9 Aconitase C-terminal domain K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000002756 241.0
HKD2_k127_2679593_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.466e-233 734.0
HKD2_k127_2679593_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 473.0
HKD2_k127_2679593_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409,K03070,K03789,K14742 GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0004596,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006473,GO:0006474,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008080,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008999,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016787,GO:0017189,GO:0018193,GO:0018194,GO:0019538,GO:0030312,GO:0031365,GO:0032991,GO:0034212,GO:0034470,GO:0034641,GO:0034660,GO:0036211,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0051604,GO:0070011,GO:0070525,GO:0071704,GO:0071944,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.128,2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 477.0
HKD2_k127_2679593_3 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 352.0
HKD2_k127_2679593_4 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000001275 180.0
HKD2_k127_2679593_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000001152 171.0
HKD2_k127_2679593_6 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000007597 137.0
HKD2_k127_2679593_7 Hydrolase, P-loop family K06925 - - 0.0000000000000000000000000000000002651 139.0
HKD2_k127_2679593_8 Uracil DNA glycosylase superfamily - - - 0.00003749 48.0
HKD2_k127_2824665_0 Belongs to the CarB family K01955 - 6.3.5.5 3.647e-204 645.0
HKD2_k127_2824665_1 Catalyzes the conversion of dihydroorotate to orotate K17828 - 1.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 400.0
HKD2_k127_2824665_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000001477 249.0
HKD2_k127_2824665_3 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.00000000000000000000000000000000000000000000000000000000001465 232.0
HKD2_k127_2824665_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000001161 187.0
HKD2_k127_2824665_5 integration host factor - - - 0.00000000000000000000000000005965 124.0
HKD2_k127_2824665_6 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000005334 115.0
HKD2_k127_2834980_0 transferase activity, transferring glycosyl groups K20444 - - 0.00000000000000000000000000000000000000002078 169.0
HKD2_k127_2967265_0 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 9.529e-261 837.0
HKD2_k127_2967265_1 GTP-binding protein TypA K06207 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 550.0
HKD2_k127_2967265_10 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000003734 74.0
HKD2_k127_2967265_2 PFAM LOR SDH bifunctional - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 441.0
HKD2_k127_2967265_3 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 414.0
HKD2_k127_2967265_4 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 353.0
HKD2_k127_2967265_5 PFAM Rubrerythrin - GO:0003674,GO:0003824,GO:0004601,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0016692,GO:0022900,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001381 278.0
HKD2_k127_2967265_6 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000007001 248.0
HKD2_k127_2967265_7 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000531 183.0
HKD2_k127_2967265_8 PFAM Methionine sulfoxide reductase B K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000001618 175.0
HKD2_k127_2967265_9 Protein of unknown function (DUF1003) - - - 0.0000000000000000000000000000003706 130.0
HKD2_k127_3138750_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 9.775e-207 658.0
HKD2_k127_3138750_1 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 369.0
HKD2_k127_3138750_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 358.0
HKD2_k127_3138750_3 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 335.0
HKD2_k127_3138750_4 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000003395 261.0
HKD2_k127_3138750_5 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000004602 226.0
HKD2_k127_3138750_6 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000002024 165.0
HKD2_k127_3138750_7 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0000000000000000000008904 97.0
HKD2_k127_3138750_8 FtsK SpoIIIE family K03466 - - 0.00002149 58.0
HKD2_k127_3175879_0 Cation transporting ATPase, C-terminus K01531 - 3.6.3.2 9.39e-291 927.0
HKD2_k127_3175879_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 549.0
HKD2_k127_3175879_10 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 323.0
HKD2_k127_3175879_11 OST-HTH/LOTUS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 298.0
HKD2_k127_3175879_12 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005421 298.0
HKD2_k127_3175879_13 protein conserved in bacteria (DUF2179) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001383 258.0
HKD2_k127_3175879_14 SNARE associated Golgi protein K03975 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000438 250.0
HKD2_k127_3175879_15 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000001926 231.0
HKD2_k127_3175879_16 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000004131 231.0
HKD2_k127_3175879_17 chemotaxis K03406 - - 0.0000000000000000000000000000000000000000000000000000000003451 218.0
HKD2_k127_3175879_18 Regulator of chromosome condensation (RCC1) repeat - - - 0.0000000000000000000000000000000000000000000000000001672 208.0
HKD2_k127_3175879_19 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000653 194.0
HKD2_k127_3175879_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 451.0
HKD2_k127_3175879_20 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000004479 180.0
HKD2_k127_3175879_21 PFAM Acetyltransferase (GNAT) family K00657 - 2.3.1.57 0.000000000000000000000000000000000000000000000001754 184.0
HKD2_k127_3175879_22 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000002828 191.0
HKD2_k127_3175879_23 PHP domain protein K04477 - - 0.00000000000000000000000000000000000000000000002953 190.0
HKD2_k127_3175879_24 Type II/IV secretion system protein - - - 0.0000000000000000000000000000000000000000000003365 183.0
HKD2_k127_3175879_25 Metal-dependent hydrolase K07043 - - 0.0000000000000000000000000000000000000004831 158.0
HKD2_k127_3175879_26 heat shock protein binding - - - 0.000000000000000000000000000000000001312 154.0
HKD2_k127_3175879_27 - - - - 0.00000000000000000000000000000000001072 140.0
HKD2_k127_3175879_28 Condensation domain - - - 0.00000000000000000000000000000000005725 152.0
HKD2_k127_3175879_29 heat shock protein binding - - - 0.000000000000000000000000000000006562 141.0
HKD2_k127_3175879_3 Two component signalling adaptor domain K03407,K13490 GO:0003674,GO:0005488,GO:0005515,GO:0019904 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 458.0
HKD2_k127_3175879_30 Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000005791 139.0
HKD2_k127_3175879_31 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 - - 0.000000000000000000000000000003286 124.0
HKD2_k127_3175879_32 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000785 111.0
HKD2_k127_3175879_33 RF-1 domain - - - 0.000000000000000000000000196 110.0
HKD2_k127_3175879_34 Two component signalling adaptor domain K03408 - - 0.0000000000000000001208 97.0
HKD2_k127_3175879_35 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000002438 90.0
HKD2_k127_3175879_36 Transcriptional regulator PadR-like family - - - 0.000000000000000171 83.0
HKD2_k127_3175879_37 Two component signalling adaptor domain K03408 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006935,GO:0008150,GO:0009453,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0042333,GO:0044424,GO:0044444,GO:0044464,GO:0050896 - 0.0000000000000003167 90.0
HKD2_k127_3175879_38 heat shock protein binding K05516 - - 0.000000000000005817 84.0
HKD2_k127_3175879_39 4Fe-4S single cluster domain of Ferredoxin I K05337 - - 0.00000000000005592 73.0
HKD2_k127_3175879_4 M42 glutamyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007735 432.0
HKD2_k127_3175879_40 - - - - 0.0000000000001856 85.0
HKD2_k127_3175879_42 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 0.00001528 57.0
HKD2_k127_3175879_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 410.0
HKD2_k127_3175879_6 beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 387.0
HKD2_k127_3175879_7 Transketolase, pyridine binding domain protein K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 380.0
HKD2_k127_3175879_8 cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008082 355.0
HKD2_k127_3175879_9 metal-dependent phosphohydrolase HD region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 333.0
HKD2_k127_318185_0 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 305.0
HKD2_k127_318185_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000144 277.0
HKD2_k127_318185_2 Glycosyl transferase family 4 K02851 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016043,GO:0016740,GO:0016772,GO:0016780,GO:0030145,GO:0034645,GO:0042546,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0045229,GO:0046872,GO:0046914,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:1901576 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000116 285.0
HKD2_k127_318185_3 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000002604 256.0
HKD2_k127_318185_4 PFAM Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000000000001962 224.0
HKD2_k127_318185_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000002625 203.0
HKD2_k127_318185_6 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000006949 143.0
HKD2_k127_318185_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000007316 113.0
HKD2_k127_318185_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation - - - 0.000000000000000008304 86.0
HKD2_k127_3263738_0 Belongs to the transketolase family K00615 - 2.2.1.1 3.448e-196 630.0
HKD2_k127_3263738_1 Nickel-dependent hydrogenase K06281 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 574.0
HKD2_k127_3263738_10 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000001231 93.0
HKD2_k127_3263738_11 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 0.0000000000000000009838 87.0
HKD2_k127_3263738_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 496.0
HKD2_k127_3263738_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K14080 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.246,4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007606 430.0
HKD2_k127_3263738_4 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 396.0
HKD2_k127_3263738_5 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000005934 271.0
HKD2_k127_3263738_6 Cytochrome b/b6/petB K03620 - - 0.00000000000000000000000000000000000000000000000000000000000007342 220.0
HKD2_k127_3263738_7 Inositol monophosphatase family K01092 GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25 0.00000000000000000000000000000000000000000000000001208 191.0
HKD2_k127_3263738_8 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000002912 147.0
HKD2_k127_3263738_9 hydrogenase maturation protease K03605 - - 0.00000000000000000000000001285 118.0
HKD2_k127_3325752_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 469.0
HKD2_k127_3325752_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 477.0
HKD2_k127_3325752_10 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000000000000000000002476 139.0
HKD2_k127_3325752_11 ArsR family transcriptional regulator - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000001431 116.0
HKD2_k127_3325752_12 Phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.00000000000000000002854 94.0
HKD2_k127_3325752_13 Zn-dependent protease with chaperone function K03799 - - 0.000000000009713 77.0
HKD2_k127_3325752_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 449.0
HKD2_k127_3325752_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 354.0
HKD2_k127_3325752_4 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000007043 238.0
HKD2_k127_3325752_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000111 236.0
HKD2_k127_3325752_6 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000007984 173.0
HKD2_k127_3325752_7 Histidine biosynthesis bifunctional protein hisIE K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000001493 154.0
HKD2_k127_3325752_8 Belongs to the TrpC family K01609,K13498 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48,5.3.1.24 0.0000000000000000000000000000000000000001597 167.0
HKD2_k127_3325752_9 Protein of unknown function (DUF1648) - - - 0.0000000000000000000000000000000000000727 154.0
HKD2_k127_340133_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000732 538.0
HKD2_k127_340133_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006 - 2.7.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 455.0
HKD2_k127_340133_10 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000004495 165.0
HKD2_k127_340133_11 PadR family transcriptional regulator K10947 - - 0.000000000000000000000000000000000000001381 150.0
HKD2_k127_340133_13 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000004533 108.0
HKD2_k127_340133_14 Transcriptional regulator - - - 0.00000000000000000004792 98.0
HKD2_k127_340133_15 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K07275,K16079 - - 0.0000000000000000003095 95.0
HKD2_k127_340133_16 Excalibur calcium-binding domain - - - 0.00000000000002521 79.0
HKD2_k127_340133_17 membrane - - - 0.0000000000001802 83.0
HKD2_k127_340133_18 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000005053 78.0
HKD2_k127_340133_2 GTP-binding protein TypA K06207 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005299 391.0
HKD2_k127_340133_20 Bacterial regulatory proteins, tetR family - - - 0.000000006812 66.0
HKD2_k127_340133_21 Kinase domain K12132 - 2.7.11.1 0.00000001294 64.0
HKD2_k127_340133_22 - - - - 0.000006541 53.0
HKD2_k127_340133_23 Phospholipase_D-nuclease N-terminal - - - 0.0001427 48.0
HKD2_k127_340133_3 TIGRFAM cation diffusion facilitator family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 341.0
HKD2_k127_340133_4 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 323.0
HKD2_k127_340133_5 Putative sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 289.0
HKD2_k127_340133_6 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000004088 233.0
HKD2_k127_340133_7 WG containing repeat - - - 0.0000000000000000000000000000000000000000000000005526 196.0
HKD2_k127_340133_8 SMART Elongator protein 3 MiaB NifB K22226 - - 0.000000000000000000000000000000000000000000000002782 195.0
HKD2_k127_340133_9 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000002632 181.0
HKD2_k127_3858650_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000366 394.0
HKD2_k127_3858650_1 Cysteine desulfurase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 351.0
HKD2_k127_3858650_10 TIGRFAM molybdenum cofactor synthesis - - - 0.0000000000000000000000000000000000000000001404 172.0
HKD2_k127_3858650_11 Bacterial extracellular solute-binding protein K05772 - - 0.0000000000000000000000000000000000000005865 159.0
HKD2_k127_3858650_12 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.000000000000000000000000000000000000006654 151.0
HKD2_k127_3858650_13 - - - - 0.000003042 59.0
HKD2_k127_3858650_14 TIGRFAM Ni Fe-hydrogenase, b-type cytochrome subunit K03620 - - 0.000191 50.0
HKD2_k127_3858650_2 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 343.0
HKD2_k127_3858650_3 Bacterial extracellular solute-binding protein K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006618 277.0
HKD2_k127_3858650_4 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02045,K02049,K02068,K02071,K06857,K10112,K11072 - 3.6.3.25,3.6.3.30,3.6.3.31,3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000395 258.0
HKD2_k127_3858650_5 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000865 237.0
HKD2_k127_3858650_6 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000001846 226.0
HKD2_k127_3858650_7 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000000000009577 212.0
HKD2_k127_3858650_8 PFAM binding-protein-dependent transport systems inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000001593 210.0
HKD2_k127_3858650_9 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000003385 194.0
HKD2_k127_3904148_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 1.651e-312 979.0
HKD2_k127_3904148_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 3.235e-219 696.0
HKD2_k127_3904148_10 RNA polymerase sigma-70 factor, sigma-B F G subfamily K03090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009347 312.0
HKD2_k127_3904148_11 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 307.0
HKD2_k127_3904148_12 PFAM peptidase M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008962 285.0
HKD2_k127_3904148_13 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008136 258.0
HKD2_k127_3904148_14 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000341 232.0
HKD2_k127_3904148_15 Type IV pilus assembly protein PilM; K02662 - - 0.00000000000000000000000000000000000000000000000000000000000002883 228.0
HKD2_k127_3904148_16 Conserved hypothetical ATP binding protein K06945 - - 0.00000000000000000000000000000000000000000000000000000000007697 209.0
HKD2_k127_3904148_17 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000004195 210.0
HKD2_k127_3904148_18 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000005062 190.0
HKD2_k127_3904148_19 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000189 202.0
HKD2_k127_3904148_2 General secretory system II, protein E domain protein K02652 - - 4.439e-197 635.0
HKD2_k127_3904148_20 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000005515 181.0
HKD2_k127_3904148_21 HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 K07015 - - 0.000000000000000000000000000000000000001425 161.0
HKD2_k127_3904148_22 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000491 167.0
HKD2_k127_3904148_23 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000004702 140.0
HKD2_k127_3904148_24 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.000000000000000000000000000000003303 144.0
HKD2_k127_3904148_25 PFAM Roadblock LC7 family protein K07131 - - 0.0000000000000000000000000000001231 134.0
HKD2_k127_3904148_26 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000000000000001388 107.0
HKD2_k127_3904148_27 - K04757 - 2.7.11.1 0.0000000000000000002804 93.0
HKD2_k127_3904148_28 - - - - 0.0000000000003713 78.0
HKD2_k127_3904148_29 prepilin-type N-terminal cleavage methylation domain K02456,K02650 - - 0.00000000002573 76.0
HKD2_k127_3904148_3 General secretory system II, protein E domain protein K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 582.0
HKD2_k127_3904148_30 Prokaryotic N-terminal methylation motif - - - 0.000001543 62.0
HKD2_k127_3904148_31 PFAM Fimbrial assembly family protein K02663 - - 0.000002287 57.0
HKD2_k127_3904148_32 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000003682 48.0
HKD2_k127_3904148_33 PFAM Pilus assembly protein PilO K02664 - - 0.000184 51.0
HKD2_k127_3904148_34 Bacterial protein of unknown function (DUF948) - - - 0.0007236 47.0
HKD2_k127_3904148_4 PFAM AAA ATPase central domain protein K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003421 533.0
HKD2_k127_3904148_5 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 476.0
HKD2_k127_3904148_6 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 446.0
HKD2_k127_3904148_7 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 385.0
HKD2_k127_3904148_8 COG COG1459 Type II secretory pathway component PulF Cell motility and secretion Intracellular trafficking and secretion K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 349.0
HKD2_k127_3904148_9 PFAM AMP-dependent synthetase and ligase K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003859 318.0
HKD2_k127_3951125_0 PFAM Uncharacterised protein family UPF0182 K09118 - - 8.632e-195 623.0
HKD2_k127_3951125_1 Alanine-glyoxylate amino-transferase K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 539.0
HKD2_k127_3951125_10 phosphoribosyltransferase K07100 - - 0.00000000000000000000000000000000000000000000001586 179.0
HKD2_k127_3951125_11 Polysaccharide deacetylase K01181,K22278 - 3.2.1.8,3.5.1.104 0.00000000000000000000000000000000000000000001097 180.0
HKD2_k127_3951125_12 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000001238 164.0
HKD2_k127_3951125_13 Haloacid dehalogenase domain protein hydrolase, type 3 - - - 0.00000000000000000000000000000000000000007604 169.0
HKD2_k127_3951125_14 YbaK prolyl-tRNA synthetase associated region - - - 0.00000000000000000000000002411 116.0
HKD2_k127_3951125_15 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000001678 113.0
HKD2_k127_3951125_16 - - - - 0.000000000000000004013 94.0
HKD2_k127_3951125_17 Redoxin - - - 0.00000000003892 69.0
HKD2_k127_3951125_18 Acetyltransferase (GNAT) domain - - - 0.000000000235 69.0
HKD2_k127_3951125_2 Magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006768 508.0
HKD2_k127_3951125_20 PFAM PRC-barrel domain - - - 0.00000001901 64.0
HKD2_k127_3951125_3 Metal ion transporter, metal ion (Mn2 Fe2 ) transporter (Nramp) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 451.0
HKD2_k127_3951125_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 311.0
HKD2_k127_3951125_5 serine threonine protein kinase K08884,K12132 GO:0000270,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0010698,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0022603,GO:0022604,GO:0030145,GO:0030203,GO:0030234,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032091,GO:0034645,GO:0036211,GO:0040007,GO:0042304,GO:0042546,GO:0042802,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043388,GO:0043393,GO:0043412,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046872,GO:0046890,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051055,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0075136,GO:0080090,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 305.0
HKD2_k127_3951125_6 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004594 276.0
HKD2_k127_3951125_7 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000004651 229.0
HKD2_k127_3951125_8 phosphoprotein phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000001221 216.0
HKD2_k127_3951125_9 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.000000000000000000000000000000000000000000000004619 185.0
HKD2_k127_3980121_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1120.0
HKD2_k127_3980121_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 4.21e-260 815.0
HKD2_k127_3980121_10 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008815 323.0
HKD2_k127_3980121_11 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 320.0
HKD2_k127_3980121_12 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 308.0
HKD2_k127_3980121_13 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001394 280.0
HKD2_k127_3980121_14 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001447 283.0
HKD2_k127_3980121_15 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000189 257.0
HKD2_k127_3980121_16 Serine dehydratase alpha chain K01752 - 4.3.1.17 0.0000000000000000000000000000000000000000000000000000000000000000008745 238.0
HKD2_k127_3980121_17 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000009513 235.0
HKD2_k127_3980121_18 TIGRFAM L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 - 4.3.1.17 0.00000000000000000000000000000000000000000000000000000000000001411 224.0
HKD2_k127_3980121_19 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000001551 211.0
HKD2_k127_3980121_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 1.623e-222 722.0
HKD2_k127_3980121_20 R3H domain K06346 - - 0.000000000000000000000000000000000000000000000000000000006348 207.0
HKD2_k127_3980121_21 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000000000000000000681 214.0
HKD2_k127_3980121_22 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000003815 190.0
HKD2_k127_3980121_23 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000007115 181.0
HKD2_k127_3980121_24 IA, variant 3 K06019 - 3.6.1.1 0.00000000000000000000000000000000000000000000001517 183.0
HKD2_k127_3980121_25 Membrane protein insertase, YidC Oxa1 family K03217 - - 0.00000000000000000000000000000000000000000001404 173.0
HKD2_k127_3980121_26 PFAM Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000001591 162.0
HKD2_k127_3980121_27 Bifunctional nuclease K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000003053 151.0
HKD2_k127_3980121_28 Major facilitator superfamily - - - 0.000000000000000000000000000000000000005906 162.0
HKD2_k127_3980121_29 Histidine kinase K02484 - 2.7.13.3 0.000000000000000000000000000000000000761 158.0
HKD2_k127_3980121_3 DnaQ family exonuclease DinG family helicase K03722 - 3.6.4.12 8.65e-216 705.0
HKD2_k127_3980121_30 Histidine kinase - - - 0.000000000000000000000000000000000007486 154.0
HKD2_k127_3980121_31 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000002849 138.0
HKD2_k127_3980121_33 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000001782 113.0
HKD2_k127_3980121_34 WYL domain K13572,K13573 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000001156 125.0
HKD2_k127_3980121_35 cyclic nucleotide-binding K01420,K21563 - - 0.0000000000000000000000003406 115.0
HKD2_k127_3980121_36 overlaps another CDS with the same product name K13573 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000001926 96.0
HKD2_k127_3980121_37 FeoA - - - 0.00000000000000004614 84.0
HKD2_k127_3980121_38 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000003361 77.0
HKD2_k127_3980121_39 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0008150,GO:0040007 3.1.26.5 0.000000000001429 72.0
HKD2_k127_3980121_4 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 1.779e-207 661.0
HKD2_k127_3980121_40 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000355 72.0
HKD2_k127_3980121_41 - - - - 0.000000005266 66.0
HKD2_k127_3980121_42 Protein of unknown function (DUF721) - - - 0.0004258 52.0
HKD2_k127_3980121_43 - - - - 0.0004688 46.0
HKD2_k127_3980121_44 gas vesicle protein - - - 0.0007585 46.0
HKD2_k127_3980121_5 Bacterial dnaA protein helix-turn-helix domain K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 466.0
HKD2_k127_3980121_6 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 461.0
HKD2_k127_3980121_7 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 393.0
HKD2_k127_3980121_8 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 339.0
HKD2_k127_3980121_9 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008615 329.0
HKD2_k127_401030_0 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 554.0
HKD2_k127_401030_1 Chemotaxis protein CheA K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 461.0
HKD2_k127_401030_10 Peptidoglycan binding domain - - - 0.00000000000000000000000000000000000000000299 166.0
HKD2_k127_401030_11 NLP P60 protein K21471 - - 0.0000000000000000000000000000000000000002298 166.0
HKD2_k127_401030_12 endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000306 153.0
HKD2_k127_401030_13 Chemotaxis protein CheC K03410 - - 0.000000000000000000000000000000000000004274 155.0
HKD2_k127_401030_14 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000005361 130.0
HKD2_k127_401030_15 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000002986 120.0
HKD2_k127_401030_16 VanZ like family - - - 0.000000000000000004375 91.0
HKD2_k127_401030_2 glycosyl transferase, family 51 K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008957 443.0
HKD2_k127_401030_3 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003621 403.0
HKD2_k127_401030_4 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006083 317.0
HKD2_k127_401030_5 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004149 286.0
HKD2_k127_401030_6 chemotaxis K03406 - - 0.00000000000000000000000000000000000000000000000000000005442 213.0
HKD2_k127_401030_7 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000008647 202.0
HKD2_k127_401030_8 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000001814 162.0
HKD2_k127_401030_9 NapC/NirT cytochrome c family, N-terminal region - - - 0.0000000000000000000000000000000000000000003365 180.0
HKD2_k127_4065125_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 492.0
HKD2_k127_4065125_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 402.0
HKD2_k127_4065125_2 RecQ zinc-binding K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000617 373.0
HKD2_k127_4065125_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000001832 191.0
HKD2_k127_4065125_4 Histidine triad domain protein K02503 - - 0.00000000000000000000000000000000004576 143.0
HKD2_k127_4065125_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000001338 74.0
HKD2_k127_4077086_0 RmlD substrate binding domain K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000005102 246.0
HKD2_k127_4077086_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000001154 198.0
HKD2_k127_4077086_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000003786 192.0
HKD2_k127_4077086_3 Acyltransferase - - - 0.0000000000009807 81.0
HKD2_k127_423417_0 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009528 557.0
HKD2_k127_423417_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 507.0
HKD2_k127_423417_2 Belongs to the 'phage' integrase family. XerC subfamily K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 331.0
HKD2_k127_423417_3 PFAM Branched-chain amino acid transport system permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008064 293.0
HKD2_k127_423417_4 ABC transporter substrate-binding protein PnrA-like K02058,K07335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001157 290.0
HKD2_k127_423417_5 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001959 269.0
HKD2_k127_423417_6 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000454 121.0
HKD2_k127_423417_7 Protein of unknown function (DUF3866) - - - 0.00000000000000002244 85.0
HKD2_k127_4255174_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 459.0
HKD2_k127_4255174_1 to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005953 442.0
HKD2_k127_4255174_10 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000001365 272.0
HKD2_k127_4255174_11 Cell division protein FtsQ K03589 - - 0.00000000000000000000000001021 122.0
HKD2_k127_4255174_12 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000001759 103.0
HKD2_k127_4255174_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008477 424.0
HKD2_k127_4255174_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 384.0
HKD2_k127_4255174_4 PASTA domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009673 394.0
HKD2_k127_4255174_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 357.0
HKD2_k127_4255174_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 357.0
HKD2_k127_4255174_7 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 350.0
HKD2_k127_4255174_8 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009862 296.0
HKD2_k127_4255174_9 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002072 292.0
HKD2_k127_4269808_0 Putative glucoamylase K13688 - - 0.0 2441.0
HKD2_k127_4269808_1 TIGRFAM Ammonium transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 587.0
HKD2_k127_4269808_2 Belongs to the P(II) protein family K04751,K04752 - - 0.00000000000000000000000000000002772 137.0
HKD2_k127_4269808_3 COG0607 Rhodanese-related sulfurtransferase K03972 - - 0.00000000000000131 83.0
HKD2_k127_4269808_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K06196 - - 0.000000008316 59.0
HKD2_k127_4359435_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 1.408e-214 689.0
HKD2_k127_4359435_1 DegT/DnrJ/EryC1/StrS aminotransferase family K12452 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 595.0
HKD2_k127_4359435_10 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000007947 241.0
HKD2_k127_4359435_2 PFAM aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 574.0
HKD2_k127_4359435_3 NeuB family K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 577.0
HKD2_k127_4359435_4 PFAM Glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 401.0
HKD2_k127_4359435_5 CDP-glucose 4,6-dehydratase K01709 - 4.2.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 394.0
HKD2_k127_4359435_6 Glucose-1-phosphate cytidylyltransferase K00978 - 2.7.7.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 384.0
HKD2_k127_4359435_7 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 295.0
HKD2_k127_4359435_8 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 299.0
HKD2_k127_4359435_9 ADP-glyceromanno-heptose 6-epimerase activity K01710,K01784 - 4.2.1.46,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007854 293.0
HKD2_k127_4370597_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1030.0
HKD2_k127_4370597_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 411.0
HKD2_k127_4370597_10 calcium- and calmodulin-responsive adenylate cyclase activity K08372 - - 0.000000000000000000000000000001517 141.0
HKD2_k127_4370597_11 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000003969 133.0
HKD2_k127_4370597_12 PFAM Polysaccharide biosynthesis protein - - - 0.000000000000000002681 99.0
HKD2_k127_4370597_13 Belongs to the phosphoglycerate mutase family K15634 - 5.4.2.12 0.0000000000000007341 85.0
HKD2_k127_4370597_14 Belongs to the glycosyl hydrolase 43 family - - - 0.000001235 62.0
HKD2_k127_4370597_2 Polysaccharide biosynthesis protein K01784,K08679 - 5.1.3.2,5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008533 331.0
HKD2_k127_4370597_3 Bifunctional protein K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008744 292.0
HKD2_k127_4370597_4 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000353 239.0
HKD2_k127_4370597_5 Chain length determinant protein - - - 0.000000000000000000000000000000000000000000000000000004093 210.0
HKD2_k127_4370597_6 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000001835 173.0
HKD2_k127_4370597_7 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000004729 154.0
HKD2_k127_4370597_8 ligase activity - - - 0.0000000000000000000000000000000007138 144.0
HKD2_k127_4370597_9 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000001616 143.0
HKD2_k127_4374855_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 5.626e-244 767.0
HKD2_k127_4374855_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 1.163e-222 698.0
HKD2_k127_4374855_2 metallopeptidase activity K03568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 515.0
HKD2_k127_4374855_3 Putative modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002183 277.0
HKD2_k127_4374855_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000008484 238.0
HKD2_k127_4374855_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.0000000000000000000000000000000000000000000000001377 184.0
HKD2_k127_4374855_6 NLP P60 protein K21471 - - 0.000000000000000000000000000000000000000003476 173.0
HKD2_k127_4374855_7 Produces ATP from ADP in the presence of a proton gradient across the membrane K02122 - - 0.0000003484 56.0
HKD2_k127_4374855_8 subunit c K02119 - - 0.00007796 47.0
HKD2_k127_4565319_0 Uracil-DNA glycosylase, family 4 K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000008079 221.0
HKD2_k127_4565319_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.0000000000000000000000000000000000000000000000000000002687 196.0
HKD2_k127_4565319_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.000000000000000000000000000000000000000000000000001093 190.0
HKD2_k127_4565319_3 Putative TM nitroreductase - - - 0.00000000000000000000000000000000000000001564 163.0
HKD2_k127_4642278_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 3.233e-197 637.0
HKD2_k127_4642278_1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K16881 - 2.7.7.13,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 614.0
HKD2_k127_4642278_10 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 439.0
HKD2_k127_4642278_11 pfam ammecr1 K06990,K09141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 384.0
HKD2_k127_4642278_12 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007142 314.0
HKD2_k127_4642278_13 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 324.0
HKD2_k127_4642278_14 histidine kinase DNA gyrase B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 294.0
HKD2_k127_4642278_15 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009294 292.0
HKD2_k127_4642278_16 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001392 283.0
HKD2_k127_4642278_17 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001452 286.0
HKD2_k127_4642278_18 TrkA-N domain K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002446 276.0
HKD2_k127_4642278_19 ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006541 272.0
HKD2_k127_4642278_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 571.0
HKD2_k127_4642278_20 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002019 261.0
HKD2_k127_4642278_21 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000002471 257.0
HKD2_k127_4642278_22 PFAM ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001758 256.0
HKD2_k127_4642278_23 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000001983 246.0
HKD2_k127_4642278_24 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000005349 241.0
HKD2_k127_4642278_25 PFAM PHP domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000001562 228.0
HKD2_k127_4642278_26 VanW like protein - - - 0.000000000000000000000000000000000000000000000000000000000002234 232.0
HKD2_k127_4642278_27 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000001956 209.0
HKD2_k127_4642278_28 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000001663 203.0
HKD2_k127_4642278_29 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 GO:0000287,GO:0003674,GO:0003824,GO:0004422,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006166,GO:0006177,GO:0006188,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032261,GO:0032263,GO:0032264,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0043094,GO:0043101,GO:0043167,GO:0043169,GO:0043173,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046040,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.8 0.00000000000000000000000000000000000000000000000000000007244 201.0
HKD2_k127_4642278_3 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 557.0
HKD2_k127_4642278_30 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000207 197.0
HKD2_k127_4642278_31 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000001919 199.0
HKD2_k127_4642278_32 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000001822 175.0
HKD2_k127_4642278_33 NLP P60 protein K21471 - - 0.000000000000000000000000000000000000000000001011 179.0
HKD2_k127_4642278_34 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding - - - 0.00000000000000000000000000000000000000000002328 169.0
HKD2_k127_4642278_35 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000001691 160.0
HKD2_k127_4642278_36 Psort location Cytoplasmic, score K00760 - 2.4.2.8 0.00000000000000000000000000000000000004 147.0
HKD2_k127_4642278_37 PFAM amino acid-binding ACT domain protein - - - 0.000000000000000000000000000000000002031 142.0
HKD2_k127_4642278_38 Stage V sporulation protein S (SpoVS) K06416 - - 0.000000000000000000000000000000000003542 142.0
HKD2_k127_4642278_39 PFAM Biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.000000000000000000000000000000000005051 151.0
HKD2_k127_4642278_4 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 556.0
HKD2_k127_4642278_40 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.00000000000000000000000000000000002163 148.0
HKD2_k127_4642278_41 PFAM amino acid-binding ACT domain protein - - - 0.000000000000000000000000000000501 138.0
HKD2_k127_4642278_42 Forkhead associated domain - - - 0.000000000000000000000000001837 119.0
HKD2_k127_4642278_43 peptidoglycan binding K03642 - - 0.000000000000000000002364 105.0
HKD2_k127_4642278_44 Hydrolase, NUDIX family - - - 0.000000000000007316 82.0
HKD2_k127_4642278_45 - - - - 0.000000000001218 74.0
HKD2_k127_4642278_46 Prepilin-type cleavage methylation N-terminal domain protein K02456 - - 0.00000003705 60.0
HKD2_k127_4642278_47 membrane K00389 - - 0.0000001575 62.0
HKD2_k127_4642278_48 Ami_3 K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.000009408 54.0
HKD2_k127_4642278_5 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004863 505.0
HKD2_k127_4642278_6 permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 495.0
HKD2_k127_4642278_7 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 482.0
HKD2_k127_4642278_8 PFAM Aminotransferase class I and II K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 469.0
HKD2_k127_4642278_9 permease K06901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 445.0
HKD2_k127_4656007_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 297.0
HKD2_k127_4656007_1 PFAM EAL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007379 278.0
HKD2_k127_4656007_2 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01190 - 3.2.1.23 0.00000000000000000000000000000000000000000000001109 194.0
HKD2_k127_4656007_3 peptidyl-tyrosine sulfation - - - 0.000000007086 66.0
HKD2_k127_466183_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.019e-292 916.0
HKD2_k127_466183_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0002682,GO:0002684,GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0008150,GO:0009605,GO:0009607,GO:0016020,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136 - 5.564e-270 848.0
HKD2_k127_466183_10 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000001728 238.0
HKD2_k127_466183_11 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.000000000000000000000000000000000000000000000000000000000009204 231.0
HKD2_k127_466183_12 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000003239 212.0
HKD2_k127_466183_13 TIGRFAM cell envelope-related function transcriptional attenuator - - - 0.00000000000000000000000000000000000000001083 168.0
HKD2_k127_466183_14 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0004140,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032552,GO:0032553,GO:0032554,GO:0032557,GO:0032558,GO:0032564,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000001351 150.0
HKD2_k127_466183_15 PFAM Lytic transglycosylase catalytic K08309 - - 0.000000000000000000000000000001319 129.0
HKD2_k127_466183_16 ATP cob(I)alamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000001588 119.0
HKD2_k127_466183_17 - - - - 0.000000001158 68.0
HKD2_k127_466183_18 Conserved repeat domain - - - 0.000005545 57.0
HKD2_k127_466183_2 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005601 466.0
HKD2_k127_466183_3 Ribosomal protein S1 K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 394.0
HKD2_k127_466183_4 NmrA-like family K01709,K01710,K01784 - 4.2.1.45,4.2.1.46,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 383.0
HKD2_k127_466183_5 Glycosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 306.0
HKD2_k127_466183_6 Sugar transferases involved in lipopolysaccharide synthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005259 287.0
HKD2_k127_466183_7 PFAM asparagine synthase K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009591 293.0
HKD2_k127_466183_8 ABC1 family K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000002025 247.0
HKD2_k127_466183_9 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000001738 231.0
HKD2_k127_4698843_0 potassium uptake protein TrkH K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 532.0
HKD2_k127_4698843_1 TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000004471 230.0
HKD2_k127_4698843_2 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000003345 190.0
HKD2_k127_4698843_3 domain, Protein - - - 0.00000000000000000000000000000003421 145.0
HKD2_k127_4698843_4 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.0000000000000000000000009845 118.0
HKD2_k127_4698843_5 - - - - 0.000000000000000000001062 111.0
HKD2_k127_4698843_6 DNA topoisomerase type I activity K03169 - 5.99.1.2 0.00000000000000005249 82.0
HKD2_k127_4698843_7 Protein of unknown function (DUF1461) - - - 0.0000000000001834 84.0
HKD2_k127_4698843_8 PFAM Peptidase family M28 - - - 0.0000000000002859 83.0
HKD2_k127_4698843_9 Peptidase family M23 - - - 0.0002533 49.0
HKD2_k127_5118083_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000006849 262.0
HKD2_k127_5118083_1 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000006126 177.0
HKD2_k127_5138491_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1247.0
HKD2_k127_5138491_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 3.655e-212 678.0
HKD2_k127_5138491_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005267 504.0
HKD2_k127_5138491_3 TIGRFAM Ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 478.0
HKD2_k127_5138491_4 May be required for sporulation K09762 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 370.0
HKD2_k127_5138491_5 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 316.0
HKD2_k127_5138491_6 Required for morphogenesis under gluconeogenic growth conditions - - - 0.000000000000000000000000000000000000000000000000000000000000000001178 245.0
HKD2_k127_5138491_7 Belongs to the phosphoglycerate kinase family K00927 GO:0001871,GO:0002020,GO:0003674,GO:0003824,GO:0004618,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009893,GO:0009986,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019222,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030162,GO:0030193,GO:0030195,GO:0030246,GO:0030247,GO:0030312,GO:0031323,GO:0031325,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043532,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045862,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050818,GO:0050819,GO:0050878,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051917,GO:0051919,GO:0055086,GO:0060255,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070613,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0080134,GO:0090407,GO:1900046,GO:1900047,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903034,GO:1903035,GO:1903317,GO:1903319,GO:2001065 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000003151 208.0
HKD2_k127_5138491_8 Nitrogen regulatory protein P-II - - - 0.000000000000000000000000000000000000000001434 161.0
HKD2_k127_5138491_9 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000000001218 92.0
HKD2_k127_5146081_0 Acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571 - 4.1.1.3 3.384e-267 837.0
HKD2_k127_5146081_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.849e-251 784.0
HKD2_k127_5146081_10 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000002716 195.0
HKD2_k127_5146081_11 TIGRFAM peptidase T-like protein K01258 - 3.4.11.4 0.00000000000000000000000000000000000000000001089 176.0
HKD2_k127_5146081_12 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0006082,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006793,GO:0006796,GO:0006797,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.000000000000000000000000000000000000000001059 169.0
HKD2_k127_5146081_13 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000005262 141.0
HKD2_k127_5146081_14 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan - - - 0.0000000000000000000000000001054 131.0
HKD2_k127_5146081_15 Asp23 family, cell envelope-related function - - - 0.00000000000000000005351 94.0
HKD2_k127_5146081_16 Copper transport outer membrane protein, MctB - - - 0.000000002487 68.0
HKD2_k127_5146081_17 Exonuclease VII small subunit - - - 0.0003381 48.0
HKD2_k127_5146081_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 8.733e-227 721.0
HKD2_k127_5146081_3 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 599.0
HKD2_k127_5146081_4 Thiamine pyrophosphokinase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 431.0
HKD2_k127_5146081_5 May be involved in recombinational repair of damaged DNA K03631,K13582 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0030312,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 411.0
HKD2_k127_5146081_6 integral membrane protein MviN K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 372.0
HKD2_k127_5146081_7 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001115 260.0
HKD2_k127_5146081_8 Ribosomal RNA large subunit methyltransferase J K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000002466 265.0
HKD2_k127_5146081_9 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000997 233.0
HKD2_k127_5250485_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 419.0
HKD2_k127_5250485_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004141 304.0
HKD2_k127_5250485_10 Transcriptional regulator, BadM Rrf2 family - - - 0.00000002837 57.0
HKD2_k127_5250485_2 TIGRFAM histidinol phosphate phosphatase HisJ K04486 - 3.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000002035 261.0
HKD2_k127_5250485_3 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000774 225.0
HKD2_k127_5250485_4 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000009253 211.0
HKD2_k127_5250485_5 NifU-like N terminal domain K04488 - - 0.000000000000000000000000000000000000000000000000001173 188.0
HKD2_k127_5250485_6 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.0000000000000000000000000000000000000006041 157.0
HKD2_k127_5250485_7 PFAM ribonuclease H K03469,K06864 - 3.1.26.4 0.00000000000000000000000000000000006432 141.0
HKD2_k127_5250485_8 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000001503 132.0
HKD2_k127_5250485_9 zinc ribbon domain K07164 - - 0.0000000000000000000000002232 114.0
HKD2_k127_5513086_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 522.0
HKD2_k127_5513086_1 Penicillin-binding Protein K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004215 348.0
HKD2_k127_5513086_2 - - - - 0.00000001644 55.0
HKD2_k127_5591071_0 biogenesis protein CcmF K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 480.0
HKD2_k127_5591071_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008086 469.0
HKD2_k127_5591071_10 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000004585 266.0
HKD2_k127_5591071_11 heme exporter protein CcmB K02194 - - 0.00000000000000000000000000000000000000000000000000000000000001346 223.0
HKD2_k127_5591071_12 histidine kinase DNA gyrase B - - - 0.00000000000000000000000000000000000000000000000000000000006498 222.0
HKD2_k127_5591071_13 Cytochrome c assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000007181 212.0
HKD2_k127_5591071_14 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000001177 195.0
HKD2_k127_5591071_15 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000005685 197.0
HKD2_k127_5591071_16 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000000000000009487 186.0
HKD2_k127_5591071_17 PFAM helix-turn-helix domain protein - - - 0.0000000000000000000000000000000000001234 149.0
HKD2_k127_5591071_18 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950,K13940 - 2.7.6.3,4.1.2.25 0.00000000000000000000000000000003133 136.0
HKD2_k127_5591071_19 SNARE associated Golgi protein K03975 - - 0.0000000000000000000000057 114.0
HKD2_k127_5591071_2 quinolinate synthetase A activity K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0030312,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 339.0
HKD2_k127_5591071_20 BioY family K03523 - - 0.0000000000000000001144 102.0
HKD2_k127_5591071_21 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000002517 66.0
HKD2_k127_5591071_3 Transcriptional regulatory protein, C terminal K07776 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008422 314.0
HKD2_k127_5591071_4 dihydropteroate synthase K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 309.0
HKD2_k127_5591071_5 PFAM ABC transporter K01990,K02193,K09697 - 3.6.3.41,3.6.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 306.0
HKD2_k127_5591071_6 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 310.0
HKD2_k127_5591071_7 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 303.0
HKD2_k127_5591071_8 GTP cyclohydrolase K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001369 280.0
HKD2_k127_5591071_9 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001311 284.0
HKD2_k127_5598455_0 Cell shape determining protein, MreB Mrl family K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 480.0
HKD2_k127_5598455_1 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008779 482.0
HKD2_k127_5598455_10 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000001452 90.0
HKD2_k127_5598455_11 shape-determining protein MreD K03571 - - 0.0000000000002384 78.0
HKD2_k127_5598455_12 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.0000000001068 71.0
HKD2_k127_5598455_13 NusG domain II - - - 0.00000004942 59.0
HKD2_k127_5598455_14 protein domain associated with - - - 0.00001508 53.0
HKD2_k127_5598455_2 Belongs to the SEDS family K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 321.0
HKD2_k127_5598455_3 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000002549 252.0
HKD2_k127_5598455_4 TIGRFAM electron transport complex, RnfABCDGE type, B subunit K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000001594 239.0
HKD2_k127_5598455_5 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily K03615 - - 0.0000000000000000000000000000000000000000000000000000000000000002379 226.0
HKD2_k127_5598455_6 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000005816 206.0
HKD2_k127_5598455_7 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000003073 189.0
HKD2_k127_5598455_8 electron transport chain K02560,K03613,K10773 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0044464,GO:0055114,GO:0071944 2.3.1.243,4.2.99.18 0.000000000000000000000000000000000000000000000000004169 188.0
HKD2_k127_5598455_9 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000006989 188.0
HKD2_k127_5627941_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 305.0
HKD2_k127_5627941_1 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004481 287.0
HKD2_k127_5627941_10 Belongs to the UPF0109 family K06960 - - 0.000000000000000017 84.0
HKD2_k127_5627941_2 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008218 286.0
HKD2_k127_5627941_3 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000004565 178.0
HKD2_k127_5627941_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000002692 169.0
HKD2_k127_5627941_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000002595 172.0
HKD2_k127_5627941_6 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000004849 160.0
HKD2_k127_5627941_7 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000001717 118.0
HKD2_k127_5627941_8 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000000008212 113.0
HKD2_k127_5627941_9 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000008105 95.0
HKD2_k127_5678909_0 type II secretion system protein E K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 517.0
HKD2_k127_5678909_1 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 465.0
HKD2_k127_5678909_2 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate K00756 GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009032,GO:0016740,GO:0016757,GO:0016758,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 470.0
HKD2_k127_5678909_3 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 0.00000000000000000000000000000000000006006 149.0
HKD2_k127_5695468_0 Cache domain - - - 0.000000000000000000000000000000000000000000000000000000000003344 225.0
HKD2_k127_5695468_1 PFAM MCP methyltransferase CheR-type K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000002709 205.0
HKD2_k127_5695468_2 Chemotaxis signal transduction protein K03408 - - 0.000000000000000000000000009131 119.0
HKD2_k127_5695468_3 Putative peptidoglycan binding domain - - - 0.000000000000000000000001065 121.0
HKD2_k127_5695468_4 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000001204 92.0
HKD2_k127_5695468_5 Fibronectin type III domain protein - - - 0.0000001263 66.0
HKD2_k127_5695468_6 gluconolactonase activity K14274 - - 0.0000005246 63.0
HKD2_k127_5695468_7 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000001144 63.0
HKD2_k127_5757069_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008603 585.0
HKD2_k127_5757069_1 UDP-N-acetylglucosamine 2-epimerase K08068,K18429 - 3.2.1.183,3.2.1.184 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 547.0
HKD2_k127_5757069_10 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000103 270.0
HKD2_k127_5757069_11 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000002101 239.0
HKD2_k127_5757069_13 PFAM Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000001617 218.0
HKD2_k127_5757069_14 polysaccharide biosynthetic process - - - 0.000000000000000000000000000001953 139.0
HKD2_k127_5757069_15 O-acyltransferase activity - - - 0.0000000000000000000000003335 113.0
HKD2_k127_5757069_16 - - - - 0.000000000000006825 89.0
HKD2_k127_5757069_17 GtrA-like protein - - - 0.000000000009691 76.0
HKD2_k127_5757069_2 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 461.0
HKD2_k127_5757069_3 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005573 386.0
HKD2_k127_5757069_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 361.0
HKD2_k127_5757069_5 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 350.0
HKD2_k127_5757069_6 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 353.0
HKD2_k127_5757069_7 NeuB family K01654 - 2.5.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008244 341.0
HKD2_k127_5757069_8 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001418 286.0
HKD2_k127_5757069_9 Cytidylyltransferase K00983,K18431 - 2.7.7.43,2.7.7.82 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005286 282.0
HKD2_k127_5929732_0 Alpha-amylase domain K01187 - 3.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 497.0
HKD2_k127_5929732_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07652 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000001309 258.0
HKD2_k127_5929732_10 denitrification pathway - - - 0.00000000000001135 85.0
HKD2_k127_5929732_11 - - - - 0.000000000002764 76.0
HKD2_k127_5929732_2 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000102 254.0
HKD2_k127_5929732_3 Transcriptional regulatory protein, C terminal K02483,K07658 - - 0.00000000000000000000000000000000000000000000000000000000000003224 223.0
HKD2_k127_5929732_4 Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000001649 184.0
HKD2_k127_5929732_5 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000001973 177.0
HKD2_k127_5929732_6 NapC/NirT cytochrome c family, N-terminal region - - - 0.00000000000000000000000000000000003751 147.0
HKD2_k127_5929732_7 NapC/NirT cytochrome c family, N-terminal region - - - 0.000000000000000000000000000000655 132.0
HKD2_k127_5929732_8 denitrification pathway - - - 0.000000000000000000000001569 116.0
HKD2_k127_5929732_9 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000005537 86.0
HKD2_k127_5984225_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 469.0
HKD2_k127_5984225_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 415.0
HKD2_k127_5984225_2 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 329.0
HKD2_k127_5984225_3 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000001812 258.0
HKD2_k127_6124481_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 1.373e-194 617.0
HKD2_k127_6124481_1 Conserved region in glutamate synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 562.0
HKD2_k127_6124481_2 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002129 240.0
HKD2_k127_6124481_3 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000000000000000001722 106.0
HKD2_k127_6223509_0 pilus assembly protein ATPase CpaF K02283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005689 544.0
HKD2_k127_6223509_1 Type ii secretion system K12510 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001968 270.0
HKD2_k127_6223509_2 Type II secretion system K12511 - - 0.000000000000000000000000000000000000000000000000000000001018 212.0
HKD2_k127_6223509_3 Evidence 2b Function of strongly homologous gene K02282 - - 0.0000000000000000000000000000000000000000000000000000001448 211.0
HKD2_k127_6223509_4 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000000003572 118.0
HKD2_k127_6223509_5 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.00000000000000002548 91.0
HKD2_k127_6223509_6 GTP cyclohydrolase K01495 - 3.5.4.16 0.00000000000004698 74.0
HKD2_k127_6223509_7 TadE-like protein - - - 0.0000000000000771 76.0
HKD2_k127_6300958_0 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000004036 217.0
HKD2_k127_6300958_1 Binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000007917 174.0
HKD2_k127_6300958_2 Single-stranded DNA-binding protein K03111 - - 0.00000000000000000000000000000000007753 138.0
HKD2_k127_6300958_3 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000000000000003542 134.0
HKD2_k127_6300958_4 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000003831 127.0
HKD2_k127_6391399_0 ABC transporter, transmembrane region K06147 - - 1.047e-263 835.0
HKD2_k127_6391399_1 ABC transporter, transmembrane region K06147 - - 3.489e-236 746.0
HKD2_k127_6391399_10 Rhodanese Homology Domain K21028 - 2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 368.0
HKD2_k127_6391399_11 Alcohol dehydrogenase GroES domain protein K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 348.0
HKD2_k127_6391399_12 COGs COG1125 ABC-type proline glycine betaine transport systems ATPase components K05847 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 329.0
HKD2_k127_6391399_13 glycine, betaine K05845 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 317.0
HKD2_k127_6391399_14 Protein of unknown function (DUF3365) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 308.0
HKD2_k127_6391399_15 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 289.0
HKD2_k127_6391399_16 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 289.0
HKD2_k127_6391399_17 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001938 265.0
HKD2_k127_6391399_18 UbiA prenyltransferase family K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000002154 231.0
HKD2_k127_6391399_19 Binding-protein-dependent transport system inner membrane component K05846 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0016020,GO:0031460,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0072337 - 0.000000000000000000000000000000000000000000000000000000005234 213.0
HKD2_k127_6391399_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 493.0
HKD2_k127_6391399_20 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000006969 198.0
HKD2_k127_6391399_21 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000003196 203.0
HKD2_k127_6391399_22 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000003458 193.0
HKD2_k127_6391399_23 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000005587 190.0
HKD2_k127_6391399_24 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000005466 190.0
HKD2_k127_6391399_25 PFAM Binding-protein-dependent transport system inner membrane component K05846 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0016020,GO:0031460,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0072337 - 0.0000000000000000000000000000000000000000000447 180.0
HKD2_k127_6391399_26 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000001526 171.0
HKD2_k127_6391399_27 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.000000000000000000000000000000001129 147.0
HKD2_k127_6391399_28 4Fe-4S dicluster domain K00171 - 1.2.7.1 0.000000000000000000000000000000001288 134.0
HKD2_k127_6391399_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 473.0
HKD2_k127_6391399_30 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000001879 113.0
HKD2_k127_6391399_31 DNA-binding transcription factor activity - - - 0.00000000000000000000000002657 115.0
HKD2_k127_6391399_32 PFAM Uncharacterised BCR, COG1649 - - - 0.0000000000000000000000004631 123.0
HKD2_k127_6391399_33 transcriptional regulator K10914 GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - 0.0000000000000000003849 93.0
HKD2_k127_6391399_4 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007353 469.0
HKD2_k127_6391399_5 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00169 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 445.0
HKD2_k127_6391399_6 Immune inhibitor A peptidase M6 K09607 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 426.0
HKD2_k127_6391399_7 tRNA (guanine-N7-)-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 432.0
HKD2_k127_6391399_8 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 417.0
HKD2_k127_6391399_9 PFAM Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006752 413.0
HKD2_k127_649922_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.575e-301 940.0
HKD2_k127_649922_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000000116 154.0
HKD2_k127_649922_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000005062 71.0
HKD2_k127_6514016_0 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 330.0
HKD2_k127_6514016_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006165 253.0
HKD2_k127_6514016_2 N-acetylglucosaminylinositol deacetylase activity - - - 0.0000000000000000000000000001249 125.0
HKD2_k127_6538976_0 DNA helicase K03657 - 3.6.4.12 1.541e-236 753.0
HKD2_k127_6538976_1 DHHA2 K15986 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 410.0
HKD2_k127_6538976_10 Single Cache-like K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000001352 231.0
HKD2_k127_6538976_11 phosphatidate phosphatase activity K03975,K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000008503 228.0
HKD2_k127_6538976_12 Chorismate mutase type II - - - 0.0000000000000000000005397 98.0
HKD2_k127_6538976_2 nitronate monooxygenase activity K00088,K00459 - 1.1.1.205,1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 331.0
HKD2_k127_6538976_3 DAHP synthetase I family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 312.0
HKD2_k127_6538976_4 ATPases associated with a variety of cellular activities K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006107 309.0
HKD2_k127_6538976_5 Phosphate transport system permease protein PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002067 267.0
HKD2_k127_6538976_6 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001387 259.0
HKD2_k127_6538976_7 Response regulator receiver K07776 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009405,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0031323,GO:0031326,GO:0044419,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0080134,GO:0097159,GO:1901363,GO:1902882,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000003834 235.0
HKD2_k127_6538976_8 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000001733 232.0
HKD2_k127_6538976_9 TIGRFAM phosphate binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000003186 228.0
HKD2_k127_6568489_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 584.0
HKD2_k127_6568489_1 Domain of unknown function (DUF4153) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009595 565.0
HKD2_k127_6568489_10 2-phosphoglycerate kinase K05715 - - 0.0000000000000000000000000000000000000000000000000000000000000000245 241.0
HKD2_k127_6568489_11 - - - - 0.0000000000000000000000000000000000000000000000000000000004509 207.0
HKD2_k127_6568489_12 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000003232 201.0
HKD2_k127_6568489_13 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000001504 205.0
HKD2_k127_6568489_14 signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000000000000000000000000000000001527 204.0
HKD2_k127_6568489_15 Allomyces macrogynus ATCC 38327 - - - 0.000000000000000000000000000000000000000000000000000007674 198.0
HKD2_k127_6568489_16 PFAM Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000001183 182.0
HKD2_k127_6568489_17 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000002194 168.0
HKD2_k127_6568489_18 transferase activity, transferring acyl groups K03824 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564 - 0.000000000000000000000000000000000000000000003553 172.0
HKD2_k127_6568489_19 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.0000000000000000000000000000000000000000002707 173.0
HKD2_k127_6568489_2 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005776 485.0
HKD2_k127_6568489_20 InterPro IPR014922 - - - 0.0000000000000000000000000000000000000007892 160.0
HKD2_k127_6568489_21 Domain of unknown function (DUF4386) - - - 0.000000000000000000000000000000000000001903 157.0
HKD2_k127_6568489_22 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000001977 147.0
HKD2_k127_6568489_23 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000000000001249 146.0
HKD2_k127_6568489_24 Helix-turn-helix domain K07729 - - 0.0000000000000000000000000000006229 126.0
HKD2_k127_6568489_25 Iron-binding zinc finger CDGSH type - - - 0.000000000000000000001119 97.0
HKD2_k127_6568489_26 Acetyltransferase (GNAT) domain - - - 0.00000000000000002596 89.0
HKD2_k127_6568489_27 - - - - 0.0000000000000001795 86.0
HKD2_k127_6568489_28 - - - - 0.00000000000006154 82.0
HKD2_k127_6568489_29 TOBE domain - - - 0.0000000000005406 72.0
HKD2_k127_6568489_3 transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 381.0
HKD2_k127_6568489_30 - - - - 0.000000006913 64.0
HKD2_k127_6568489_31 methyltransferase - - - 0.0000003119 59.0
HKD2_k127_6568489_32 - - - - 0.00002396 53.0
HKD2_k127_6568489_4 Catalyzes the formation of cyclic 2,3-diphosphoglycerate (cDPG) by formation of an intramolecular phosphoanhydride bond at the expense of ATP K05716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 359.0
HKD2_k127_6568489_5 lactate metabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 318.0
HKD2_k127_6568489_6 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 310.0
HKD2_k127_6568489_7 oxidoreductase activity K21883 - 1.1.1.401 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 301.0
HKD2_k127_6568489_8 acid phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 298.0
HKD2_k127_6568489_9 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000003139 240.0
HKD2_k127_675376_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.007e-258 832.0
HKD2_k127_675376_1 Glutamine synthetase, beta-grasp domain K01915 - 6.3.1.2 1.974e-200 634.0
HKD2_k127_675376_2 Ribosomal protein S1 K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004662 250.0
HKD2_k127_675376_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000005868 236.0
HKD2_k127_675376_4 Transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000002097 207.0
HKD2_k127_675376_5 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000001273 115.0
HKD2_k127_675376_6 PFAM Copper binding proteins, plastocyanin azurin family - - - 0.00000000000000000000006474 115.0
HKD2_k127_6769225_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 2.114e-232 739.0
HKD2_k127_6769225_1 polyphosphate kinase K22468 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 408.0
HKD2_k127_6769225_2 PFAM Glucose Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 316.0
HKD2_k127_6769225_3 enzyme of poly-gamma-glutamate biosynthesis (Capsule formation) K07282 - - 0.00000000000000000000000000000000000000000000000000000003304 215.0
HKD2_k127_6769225_4 metal-dependent phosphohydrolase, HD sub domain K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000332 185.0
HKD2_k127_6769225_5 Protein of unknown function (DUF2769) - - - 0.00000000000000000009861 91.0
HKD2_k127_6769225_6 - - - - 0.0000000000000003545 87.0
HKD2_k127_6805632_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 2.495e-207 661.0
HKD2_k127_6805632_1 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 1.598e-202 642.0
HKD2_k127_6805632_2 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.00000000000000000000000000000000000000000000000000000000236 204.0
HKD2_k127_6805632_3 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000003728 178.0
HKD2_k127_6824017_0 40-residue YVTN family beta-propeller - - - 0.000000000000000000000000000000000000000004701 178.0
HKD2_k127_6824017_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000001731 102.0
HKD2_k127_6824017_2 depolymerase K03932 - - 0.00000000002758 76.0
HKD2_k127_70310_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 574.0
HKD2_k127_70310_1 FeS-containing Cyanobacterial-specific oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 332.0
HKD2_k127_70310_2 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009688 317.0
HKD2_k127_70310_3 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 292.0
HKD2_k127_70310_4 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000006194 264.0
HKD2_k127_70310_5 Ribulose-phosphate 3 epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000002484 246.0
HKD2_k127_70310_6 Lumazine binding domain K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000004106 202.0
HKD2_k127_70310_7 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000003995 136.0
HKD2_k127_7044125_0 Glutaminyl-tRNA synthetase K01886 - 6.1.1.18 3.575e-266 829.0
HKD2_k127_7044125_1 TIGRFAM DNA polymerase III, alpha subunit K02337,K14162 - 2.7.7.7 7.864e-226 740.0
HKD2_k127_7044125_12 Phosphate-starvation-inducible E - - - 0.00000776 55.0
HKD2_k127_7044125_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203 591.0
HKD2_k127_7044125_3 AAA domain (dynein-related subfamily) K03404,K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009659 555.0
HKD2_k127_7044125_4 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 381.0
HKD2_k127_7044125_5 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003834 276.0
HKD2_k127_7044125_6 EXOIII K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000227 244.0
HKD2_k127_7044125_7 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000000000000000000000000000000000000004191 203.0
HKD2_k127_7044125_8 calcium- and calmodulin-responsive adenylate cyclase activity K08372 - - 0.00000000000000000000000000000000324 143.0
HKD2_k127_7044125_9 Subtilase family K13274,K14645 - - 0.0000000006633 72.0
HKD2_k127_7048122_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.029e-298 931.0
HKD2_k127_7048122_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0001666,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009628,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0019899,GO:0030312,GO:0035375,GO:0036293,GO:0040007,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070482,GO:0071944 - 0.000000000001682 68.0
HKD2_k127_7315761_0 response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005135 343.0
HKD2_k127_7315761_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 353.0
HKD2_k127_7315761_2 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 321.0
HKD2_k127_7315761_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000008182 152.0
HKD2_k127_7315761_4 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000001391 111.0
HKD2_k127_757011_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008568 384.0
HKD2_k127_757011_1 TIGRFAM 2-oxoacid acceptor oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000002508 214.0
HKD2_k127_763793_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 582.0
HKD2_k127_763793_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007838 418.0
HKD2_k127_763793_2 fructose-1,6-bisphosphatase K02446 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 357.0
HKD2_k127_763793_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000001327 273.0
HKD2_k127_763793_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000002588 254.0
HKD2_k127_763793_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000001761 137.0
HKD2_k127_763793_6 Putative regulatory protein - - - 0.000000000001609 71.0
HKD2_k127_763793_7 Protein tyrosine kinase - - - 0.00000000001645 76.0
HKD2_k127_764143_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 2.485e-221 699.0
HKD2_k127_764143_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 555.0
HKD2_k127_764143_10 cyclic-guanylate-specific phosphodiesterase activity - - - 0.000001711 61.0
HKD2_k127_764143_11 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms K07027 - - 0.000002988 59.0
HKD2_k127_764143_12 Cobyrinic acid ac-diamide synthase - - - 0.0000159 57.0
HKD2_k127_764143_2 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006441 245.0
HKD2_k127_764143_3 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000001536 248.0
HKD2_k127_764143_4 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.000000000000000000000000000000000000000000000000001108 198.0
HKD2_k127_764143_5 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.000000000000000000000000000000000000000000006709 179.0
HKD2_k127_764143_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000003052 98.0
HKD2_k127_764143_7 transcriptional regulator - - - 0.00000000000000000004402 98.0
HKD2_k127_764143_8 protease K07052 - - 0.00000006817 65.0
HKD2_k127_764143_9 CAAX protease self-immunity K07052 - - 0.0000005516 62.0
HKD2_k127_7667607_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 8.35e-244 764.0
HKD2_k127_7667607_1 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 7.234e-206 661.0
HKD2_k127_7667607_2 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 399.0
HKD2_k127_7673918_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 2.207e-263 837.0
HKD2_k127_7673918_1 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 4.489e-249 787.0
HKD2_k127_7673918_10 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007471 442.0
HKD2_k127_7673918_11 PFAM ABC transporter K01995,K15783 GO:0003333,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0015711,GO:0015803,GO:0015804,GO:0015807,GO:0015808,GO:0015818,GO:0015829,GO:0015849,GO:0015893,GO:0032328,GO:0034220,GO:0042221,GO:0042493,GO:0042940,GO:0042941,GO:0043090,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903805,GO:1903806,GO:1903825,GO:1905039 3.5.4.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008654 400.0
HKD2_k127_7673918_12 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007339 357.0
HKD2_k127_7673918_13 serine-type endopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 355.0
HKD2_k127_7673918_14 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 357.0
HKD2_k127_7673918_15 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 331.0
HKD2_k127_7673918_16 aminopeptidase activity K19701,K19702 - 3.4.11.10,3.4.11.24,3.4.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006954 313.0
HKD2_k127_7673918_17 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003796 287.0
HKD2_k127_7673918_18 Domain of unknown function (DUF4445) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003592 254.0
HKD2_k127_7673918_19 Phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000001528 239.0
HKD2_k127_7673918_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 1.961e-196 620.0
HKD2_k127_7673918_20 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000007143 236.0
HKD2_k127_7673918_21 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000002155 205.0
HKD2_k127_7673918_22 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000008523 209.0
HKD2_k127_7673918_23 calcium- and calmodulin-responsive adenylate cyclase activity K08372 - - 0.0000000000000000000000000000000000000127 162.0
HKD2_k127_7673918_24 Histidine kinase - - - 0.000000000000000000000000000000000001206 158.0
HKD2_k127_7673918_25 Domain of unknown function (DUF1508) K09946 - - 0.00000000000000000000000000000000000307 141.0
HKD2_k127_7673918_26 response regulator - - - 0.00000000000000000000000000000000001451 143.0
HKD2_k127_7673918_27 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000001673 139.0
HKD2_k127_7673918_28 GAF domain K02480 - 2.7.13.3 0.000000000000000000000000001083 129.0
HKD2_k127_7673918_29 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000005629 126.0
HKD2_k127_7673918_3 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 4.127e-195 623.0
HKD2_k127_7673918_30 - - - - 0.0000000000000000000000007776 110.0
HKD2_k127_7673918_31 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000005387 97.0
HKD2_k127_7673918_32 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000001114 90.0
HKD2_k127_7673918_33 - - - - 0.00000000000001463 88.0
HKD2_k127_7673918_34 ACT domain protein - - - 0.000000000004641 72.0
HKD2_k127_7673918_35 L,D-transpeptidase catalytic domain - - - 0.0000000000315 73.0
HKD2_k127_7673918_36 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.00000000006933 63.0
HKD2_k127_7673918_38 Rhomboid family K19225 - 3.4.21.105 0.00000000187 66.0
HKD2_k127_7673918_39 - - - - 0.0000006677 52.0
HKD2_k127_7673918_4 Bacterial protein of unknown function (DUF853) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 615.0
HKD2_k127_7673918_40 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K02619 - 4.1.3.38 0.000001926 59.0
HKD2_k127_7673918_5 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003531 530.0
HKD2_k127_7673918_6 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0040007,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007626 546.0
HKD2_k127_7673918_7 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 529.0
HKD2_k127_7673918_8 Belongs to the binding-protein-dependent transport system permease family K01997 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0043090,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098713,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006021 475.0
HKD2_k127_7673918_9 SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008145 439.0
HKD2_k127_7675724_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 327.0
HKD2_k127_7675724_1 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 318.0
HKD2_k127_7675724_10 - - - - 0.000001693 57.0
HKD2_k127_7675724_2 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 295.0
HKD2_k127_7675724_3 zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000000000002266 224.0
HKD2_k127_7675724_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000002813 221.0
HKD2_k127_7675724_5 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000003986 179.0
HKD2_k127_7675724_6 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000001938 167.0
HKD2_k127_7675724_7 - - - - 0.00000000000000000000002806 108.0
HKD2_k127_7675724_8 Histidine kinase - - - 0.000000000000000000008504 94.0
HKD2_k127_7675724_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000001566 77.0
HKD2_k127_7699236_0 Belongs to the SEDS family - - - 5.644e-248 795.0
HKD2_k127_7699236_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 402.0
HKD2_k127_7699236_10 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000001072 194.0
HKD2_k127_7699236_11 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.00000000000000000000000000000000000004352 159.0
HKD2_k127_7699236_12 Protein of unknown function (DUF2662) - - - 0.00000000000000000000000000000000003098 144.0
HKD2_k127_7699236_13 positive regulation of acetylcholine metabolic process K06910 - - 0.0000000000000000000000000000000001297 140.0
HKD2_k127_7699236_14 PFAM Response regulator receiver domain K07658 - - 0.0000000000000000000000000000002385 128.0
HKD2_k127_7699236_15 PFAM response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000000000000005076 119.0
HKD2_k127_7699236_16 Protein of unknown function (DUF4446) - - - 0.000000000000003418 83.0
HKD2_k127_7699236_17 Inner membrane component of T3SS, cytoplasmic domain - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0016020,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051301,GO:0051704,GO:0071944 - 0.000000000000003534 80.0
HKD2_k127_7699236_18 - - - - 0.0007 43.0
HKD2_k127_7699236_2 phosphatase 2C K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 309.0
HKD2_k127_7699236_3 Kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 298.0
HKD2_k127_7699236_4 AIR carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008427 279.0
HKD2_k127_7699236_5 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000001328 274.0
HKD2_k127_7699236_6 endonuclease III K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002753 264.0
HKD2_k127_7699236_7 Benzoyl-CoA reductase 2-hydroxyglutaryl-CoA dehydratase subunit BcrC BadD HgdB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000828 250.0
HKD2_k127_7699236_8 Kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000254 264.0
HKD2_k127_7699236_9 Prephenate dehydratase K04518,K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000003709 265.0
HKD2_k127_7724144_0 metal-dependent phosphohydrolase, 7TM intracellular region K07037 - - 0.0000000000000000000000000000000000000000000000000000005086 198.0
HKD2_k127_7724144_1 Diacylglycerol kinase K00887,K00901 - 2.7.1.107,2.7.1.66 0.00000000000000000000000000000000000000000000000000201 190.0
HKD2_k127_7724144_2 Transporter associated domain - - - 0.00000000000000000000000000000000000008553 149.0
HKD2_k127_7724144_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000002201 128.0
HKD2_k127_7800383_0 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009202 373.0
HKD2_k127_7800383_1 abc transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008566 292.0
HKD2_k127_7800383_2 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008301 257.0
HKD2_k127_7800383_3 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030312,GO:0040007,GO:0044464,GO:0071944 2.7.7.6 0.0000000002376 66.0
HKD2_k127_7800383_5 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0002316 45.0
HKD2_k127_7869565_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 585.0
HKD2_k127_7869565_1 Benzoyl-CoA reductase 2-hydroxyglutaryl-CoA dehydratase subunit BcrC BadD HgdB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 372.0
HKD2_k127_7869565_2 PFAM CO dehydrogenase acetyl-CoA synthase delta subunit, TIM barrel K00197 - 2.1.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004771 328.0
HKD2_k127_7869565_3 PFAM BadF BadG BcrA BcrD ATPase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002908 259.0
HKD2_k127_7869565_4 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000000000000000003962 179.0
HKD2_k127_7869565_5 PFAM Appr-1-p processing domain protein - - - 0.000000000000000000000000000000000000000004305 161.0
HKD2_k127_7869565_6 4Fe-4S binding domain - - - 0.0000000000000000000000000001043 128.0
HKD2_k127_7869565_7 Belongs to the sulfur carrier protein TusA family K04085 - - 0.00000000000000000000000002577 111.0
HKD2_k127_7893575_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 8.839e-215 682.0
HKD2_k127_7957091_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 563.0
HKD2_k127_7957091_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 482.0
HKD2_k127_7957091_10 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000001179 202.0
HKD2_k127_7957091_11 PFAM peptidase K21471 - - 0.0000000000000000000000000000000000000000000000000206 193.0
HKD2_k127_7957091_12 MobA-like NTP transferase domain - - - 0.0000000000000000000000000000000000000000000001776 181.0
HKD2_k127_7957091_13 Histidine kinase K10681 - 2.7.13.3 0.00000000000000000000000000000000000000000001067 181.0
HKD2_k127_7957091_14 G5 domain protein - - - 0.000000000000000000000000000000000000005124 160.0
HKD2_k127_7957091_15 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000003511 145.0
HKD2_k127_7957091_16 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000004731 149.0
HKD2_k127_7957091_17 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000001966 133.0
HKD2_k127_7957091_18 Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation K06412 GO:0000003,GO:0008150,GO:0019954,GO:0030436,GO:0032502,GO:0043934 - 0.000000000000000000000008768 104.0
HKD2_k127_7957091_19 Biofilm formation stimulator VEG - - - 0.00000000000000000000003578 101.0
HKD2_k127_7957091_2 Domain of unknown function (DUF362) K07138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 409.0
HKD2_k127_7957091_20 TIGRFAM looped-hinge helix DNA binding domain, AbrB family K06284 - - 0.00000000000000005958 85.0
HKD2_k127_7957091_22 Transcriptional regulator - - - 0.00000000000008175 76.0
HKD2_k127_7957091_23 IrrE N-terminal-like domain - - - 0.0000005349 58.0
HKD2_k127_7957091_24 Domain of unknown function (DUF4870) - - - 0.0000007522 57.0
HKD2_k127_7957091_25 - - - - 0.000003543 59.0
HKD2_k127_7957091_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 357.0
HKD2_k127_7957091_4 Hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006478 249.0
HKD2_k127_7957091_5 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000004166 254.0
HKD2_k127_7957091_6 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000001717 242.0
HKD2_k127_7957091_7 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000002011 234.0
HKD2_k127_7957091_8 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000005194 210.0
HKD2_k127_7957091_9 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000006452 224.0
HKD2_k127_7966807_0 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000003738 192.0
HKD2_k127_7966807_1 TIGRFAM transcriptional regulator, Rrf2 family - - - 0.000000000000000000000000003116 115.0
HKD2_k127_7997242_0 Telomere recombination K04656 - - 1.384e-221 717.0
HKD2_k127_7997242_1 hydrogenase expression formation protein HypD K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 470.0
HKD2_k127_7997242_10 4Fe-4S ferredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000446 239.0
HKD2_k127_7997242_11 PFAM cobalamin (vitamin B12) biosynthesis CbiM protein K02007 - - 0.000000000000000000000000000000000000000000000000000102 198.0
HKD2_k127_7997242_12 Metal-dependent phosphohydrolase, HD region - - - 0.000000000000000000000000000000000000000000000000001872 206.0
HKD2_k127_7997242_13 QueT transporter - - - 0.000000000000000000000000000000000000000000000000004495 187.0
HKD2_k127_7997242_14 transcriptional regulator K07722 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000004574 184.0
HKD2_k127_7997242_15 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000000001316 144.0
HKD2_k127_7997242_16 PFAM GGDEF domain containing protein K02488 - 2.7.7.65 0.00000000000000000000000000000001978 145.0
HKD2_k127_7997242_17 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000006426 126.0
HKD2_k127_7997242_18 Cobalt ABC transporter K02008 - - 0.000000000000000000000000005822 127.0
HKD2_k127_7997242_19 membrane transporter protein K07090 - - 0.00000000000000000000001784 109.0
HKD2_k127_7997242_2 hydrogenase expression formation protein HypE K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 449.0
HKD2_k127_7997242_20 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000003939 104.0
HKD2_k127_7997242_21 hydrogenase assembly chaperone HypC HupF K04653 - - 0.0000000000000000001272 92.0
HKD2_k127_7997242_22 SMART Nucleotide binding protein, PINc K07175 - - 0.000000000000000002539 97.0
HKD2_k127_7997242_23 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000009225 57.0
HKD2_k127_7997242_24 Acetyltransferase (GNAT) family K22477 - 2.3.1.1 0.00001397 57.0
HKD2_k127_7997242_25 - - - - 0.00005518 49.0
HKD2_k127_7997242_26 Tetratricopeptide repeat - - - 0.0006358 51.0
HKD2_k127_7997242_3 histidine kinase DNA gyrase B K07704 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007763 374.0
HKD2_k127_7997242_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 370.0
HKD2_k127_7997242_5 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004918 354.0
HKD2_k127_7997242_6 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 353.0
HKD2_k127_7997242_7 ABC transporter K02006,K02008 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000212 283.0
HKD2_k127_7997242_8 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002366 290.0
HKD2_k127_7997242_9 response regulator receiver K07705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003822 271.0
HKD2_k127_8016449_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 581.0
HKD2_k127_8016449_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 477.0
HKD2_k127_8016449_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000001323 273.0
HKD2_k127_8016449_3 Sua5 YciO YrdC YwlC family K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000005331 194.0
HKD2_k127_8016449_4 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000009042 173.0
HKD2_k127_8016449_5 Protein of unknown function (DUF1385) - - - 0.0000000000000000000000000000000000000000000539 164.0
HKD2_k127_8016449_6 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.000000000000000000003284 100.0
HKD2_k127_8016449_7 Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 0.000000003523 57.0
HKD2_k127_8038014_0 Required for chromosome condensation and partitioning K03529 - - 2.293e-281 905.0
HKD2_k127_8038014_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005413 488.0
HKD2_k127_8038014_10 PFAM DRTGG domain protein K06873 - - 0.000000000000000000000000000000000000000000000000000000000000000000133 243.0
HKD2_k127_8038014_11 Acyl transferase domain K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000004501 207.0
HKD2_k127_8038014_12 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000005833 184.0
HKD2_k127_8038014_13 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000009088 114.0
HKD2_k127_8038014_14 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000004459 107.0
HKD2_k127_8038014_2 PFAM 2-nitropropane dioxygenase K02371 - 1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000996 386.0
HKD2_k127_8038014_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 370.0
HKD2_k127_8038014_4 2-nitropropane dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 353.0
HKD2_k127_8038014_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 355.0
HKD2_k127_8038014_6 Acyl-CoA synthetase (NDP forming) K09181 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 336.0
HKD2_k127_8038014_7 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 330.0
HKD2_k127_8038014_8 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005838 329.0
HKD2_k127_8038014_9 reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002061 288.0
HKD2_k127_8123097_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 4.037e-275 859.0
HKD2_k127_8123097_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 2.024e-248 794.0
HKD2_k127_8123097_2 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 - 3.6.3.12 1.652e-212 676.0
HKD2_k127_8123097_3 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000006735 237.0
HKD2_k127_8123097_4 Histidine kinase K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000002324 207.0
HKD2_k127_8123097_5 calcium- and calmodulin-responsive adenylate cyclase activity K08372 - - 0.00000000000000000000000000000000003345 154.0
HKD2_k127_8123097_6 Double zinc ribbon - - - 0.00000000000000000000000000000000003412 139.0
HKD2_k127_8153823_0 Prophage cp4-57 regulatory - - - 0.00000000000000000000000000000000000000000000001452 181.0
HKD2_k127_8153823_1 - - - - 0.0000000000000000000000000000008289 123.0
HKD2_k127_827247_0 Belongs to the CarB family K01955 - 6.3.5.5 9.852e-218 682.0
HKD2_k127_827247_1 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 459.0
HKD2_k127_827247_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 341.0
HKD2_k127_8692266_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.291e-265 839.0
HKD2_k127_8692266_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 2.14e-224 711.0
HKD2_k127_8692266_10 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000594 276.0
HKD2_k127_8692266_11 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002258 247.0
HKD2_k127_8692266_12 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000005562 226.0
HKD2_k127_8692266_13 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000008008 235.0
HKD2_k127_8692266_14 DHHA1 domain K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000001029 222.0
HKD2_k127_8692266_15 riboflavin biosynthesis protein K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000001657 220.0
HKD2_k127_8692266_16 RIP metalloprotease RseP K11749 - - 0.000000000000000000000000000000000000000000000000000000015 216.0
HKD2_k127_8692266_17 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000001674 191.0
HKD2_k127_8692266_18 Condensation domain - - - 0.00000000000000000000000000000000000000001567 171.0
HKD2_k127_8692266_19 - - - - 0.00000000000000000000000000000000001302 142.0
HKD2_k127_8692266_2 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 446.0
HKD2_k127_8692266_20 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000000001036 138.0
HKD2_k127_8692266_21 FMN binding - - - 0.0000000000000000000000000000001926 132.0
HKD2_k127_8692266_22 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000001903 107.0
HKD2_k127_8692266_23 PFAM response regulator receiver K07657 - - 0.00000000000000000002011 100.0
HKD2_k127_8692266_24 Nucleic-acid-binding protein implicated in transcription termination K02600,K07742 - - 0.0000000000000000005488 89.0
HKD2_k127_8692266_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 411.0
HKD2_k127_8692266_4 PFAM Major Facilitator Superfamily K08177 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 396.0
HKD2_k127_8692266_5 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 379.0
HKD2_k127_8692266_6 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 346.0
HKD2_k127_8692266_7 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 320.0
HKD2_k127_8692266_8 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 301.0
HKD2_k127_8692266_9 Sigma-70, region 4 K02405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007329 280.0
HKD2_k127_8693695_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 326.0
HKD2_k127_8693695_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 299.0
HKD2_k127_8693695_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000001799 234.0
HKD2_k127_8693695_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000008951 199.0
HKD2_k127_8693695_4 Metal-dependent hydrolase - GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 - 0.00000000000000000000000000000001816 138.0
HKD2_k127_8991112_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 5.704e-242 786.0
HKD2_k127_8991112_1 PFAM Band 7 protein - - - 1.423e-232 730.0
HKD2_k127_8991112_10 PFAM GCN5-related N-acetyltransferase - - - 0.00000000007788 74.0
HKD2_k127_8991112_11 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000000004387 72.0
HKD2_k127_8991112_12 - - - - 0.0000000227 66.0
HKD2_k127_8991112_13 - - - - 0.0000002583 58.0
HKD2_k127_8991112_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 558.0
HKD2_k127_8991112_3 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 489.0
HKD2_k127_8991112_4 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00895,K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 407.0
HKD2_k127_8991112_5 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007156 344.0
HKD2_k127_8991112_6 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004578 289.0
HKD2_k127_8991112_7 Cytochrome C biogenesis protein transmembrane region K02275,K09792,K17686 - 1.9.3.1,3.6.3.54 0.00000000000000000000000000000000000000002624 169.0
HKD2_k127_8991112_8 phosphorelay signal transduction system K07658 - - 0.00000000000000000000000002574 113.0
HKD2_k127_8991112_9 Cupredoxin-like domain - - - 0.00000000001134 74.0
HKD2_k127_9022459_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1311.0
HKD2_k127_9022459_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004848 392.0
HKD2_k127_9022459_10 - - - - 0.0000000000000000000000000000003318 130.0
HKD2_k127_9022459_11 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.000000000000000000000000000006359 121.0
HKD2_k127_9022459_12 Sortase family K07284 - 3.4.22.70 0.00000000000000000000000001063 122.0
HKD2_k127_9022459_13 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000005824 113.0
HKD2_k127_9022459_14 DNA-templated transcription, initiation K03088 - - 0.000000000000000000001204 110.0
HKD2_k127_9022459_15 Cobalamin B12-binding domain protein - - - 0.000000000000000001129 96.0
HKD2_k127_9022459_16 META domain K03668 - - 0.000000087 64.0
HKD2_k127_9022459_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005284 325.0
HKD2_k127_9022459_3 1,2-diacylglycerol 3-glucosyltransferase K19002 - 2.4.1.337 0.0000000000000000000000000000000000000000000000000000000000000000000001122 262.0
HKD2_k127_9022459_4 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003165 250.0
HKD2_k127_9022459_5 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004693 244.0
HKD2_k127_9022459_6 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000002645 246.0
HKD2_k127_9022459_7 ATPases associated with a variety of cellular activities K02003,K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000001065 232.0
HKD2_k127_9022459_8 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.0000000000000000000000000000000000001401 149.0
HKD2_k127_9022459_9 PFAM Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000001377 138.0
HKD2_k127_9063833_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1097.0
HKD2_k127_9063833_1 Heat shock 70 kDa protein K04043 - - 8.37e-301 938.0
HKD2_k127_9063833_10 Transcriptional regulator, MerR family K13640 - - 0.000000000000000000000000000609 119.0
HKD2_k127_9063833_11 4Fe-4S binding domain - - - 0.0000000000000000000009833 96.0
HKD2_k127_9063833_12 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000006176 57.0
HKD2_k127_9063833_13 - - - - 0.000007713 58.0
HKD2_k127_9063833_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.199e-227 715.0
HKD2_k127_9063833_3 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 348.0
HKD2_k127_9063833_4 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 321.0
HKD2_k127_9063833_5 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006469 258.0
HKD2_k127_9063833_6 NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000002027 241.0
HKD2_k127_9063833_7 CMP dCMP deaminase, zinc-binding K01487 - 3.5.4.3 0.000000000000000000000000000000000000000000000000000000000000006315 220.0
HKD2_k127_9063833_8 Sortase family - - - 0.00000000000000000000000000000000001626 145.0
HKD2_k127_9063833_9 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000007011 140.0
HKD2_k127_9166368_0 elongation factor G K02355 - - 1.144e-255 808.0
HKD2_k127_9166368_1 Oxidoreductase NAD-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 458.0
HKD2_k127_9166368_2 Nickel-dependent hydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004639 426.0
HKD2_k127_9166368_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008816 342.0
HKD2_k127_9166368_4 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily K03615 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006318 272.0
HKD2_k127_9166368_5 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000184 257.0
HKD2_k127_9166368_6 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000002171 201.0
HKD2_k127_9166368_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000001447 190.0
HKD2_k127_9166368_8 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.000000000000000000000000000000000002308 151.0
HKD2_k127_9169146_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 6.869e-230 729.0
HKD2_k127_9169146_1 PFAM ABC transporter related K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000758 312.0
HKD2_k127_9169146_10 Histidine kinase K02480 - 2.7.13.3 0.0000000000000000000000000000000000000001314 166.0
HKD2_k127_9169146_11 Tim44 - - - 0.000000000000000000004979 105.0
HKD2_k127_9169146_12 Flp/Fap pilin component K02651 - - 0.000000001739 63.0
HKD2_k127_9169146_13 Flp/Fap pilin component K02651 - - 0.00000195 59.0
HKD2_k127_9169146_14 Tim44 - - - 0.000009277 57.0
HKD2_k127_9169146_2 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 302.0
HKD2_k127_9169146_3 Branched-chain amino acid transport system / permease component K01997 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0043090,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098713,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007361 282.0
HKD2_k127_9169146_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000001941 271.0
HKD2_k127_9169146_5 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001944 261.0
HKD2_k127_9169146_6 SPFH domain-Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000114 244.0
HKD2_k127_9169146_7 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000663 244.0
HKD2_k127_9169146_8 Amidohydrolase family K12960,K20810 - 3.5.4.28,3.5.4.31,3.5.4.40 0.000000000000000000000000000000000000000000000002416 191.0
HKD2_k127_9169146_9 response regulator - - - 0.00000000000000000000000000000000000000000000009356 187.0
HKD2_k127_9343739_0 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000883 558.0
HKD2_k127_9343739_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 526.0
HKD2_k127_9343739_2 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007628 417.0
HKD2_k127_9343739_3 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 300.0
HKD2_k127_9343739_4 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000000000000000009157 167.0
HKD2_k127_9343739_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000308 116.0
HKD2_k127_9343739_6 - - - - 0.000000000000000000002944 97.0
HKD2_k127_9343739_7 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000001147 101.0
HKD2_k127_9343739_8 conserved protein (DUF2249) - - - 0.000000001735 64.0
HKD2_k127_9376687_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 1.386e-195 631.0
HKD2_k127_9376687_1 DAK2 domain fusion protein YloV K07030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 505.0
HKD2_k127_9376687_10 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000004937 101.0
HKD2_k127_9376687_11 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000001168 80.0
HKD2_k127_9376687_12 Acetyltransferase (GNAT) domain K03830 - - 0.000000000000001187 86.0
HKD2_k127_9376687_13 cluster protein-associated redox disulfide domain protein - - - 0.0001376 51.0
HKD2_k127_9376687_2 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 307.0
HKD2_k127_9376687_3 Uncharacterised protein, DegV family COG1307 - - - 0.0000000000000000000000000000000000000000000000000000004966 206.0
HKD2_k127_9376687_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000316 203.0
HKD2_k127_9376687_5 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000002787 189.0
HKD2_k127_9376687_6 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) - - - 0.0000000000000000000000000000000000000000003238 162.0
HKD2_k127_9376687_7 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000007494 142.0
HKD2_k127_9376687_8 Asp23 family, cell envelope-related function - - - 0.00000000000000000000000000000002548 132.0
HKD2_k127_9376687_9 acr, cog1399 K07040 - - 0.000000000000000000000000009765 117.0
HKD2_k127_9441451_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 514.0
HKD2_k127_9441451_1 Class ii aldolase K01628,K18847 - 2.2.1.8,4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 422.0
HKD2_k127_9606823_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 416.0
HKD2_k127_9606823_1 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 416.0
HKD2_k127_9606823_10 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000001804 106.0
HKD2_k127_9606823_11 Cytochrome b5-like Heme/Steroid binding domain - - - 0.00000000000000002081 87.0
HKD2_k127_9606823_12 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000009005 81.0
HKD2_k127_9606823_13 elongation factor G K02355 - - 0.000002219 50.0
HKD2_k127_9606823_2 GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000000000000000000001215 209.0
HKD2_k127_9606823_3 Involved in cell wall K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000001541 207.0
HKD2_k127_9606823_4 Diacylglycerol kinase catalytic domain K07029 - 2.7.1.107 0.00000000000000000000000000000000000000000000000009682 191.0
HKD2_k127_9606823_5 - - - - 0.000000000000000000000000000000000000000000003152 187.0
HKD2_k127_9606823_6 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000000001293 166.0
HKD2_k127_9606823_7 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.00000000000000000000000000000007512 134.0
HKD2_k127_9606823_8 OsmC-like protein K07397 - - 0.00000000000000000000000000000008956 130.0
HKD2_k127_9606823_9 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000007846 119.0
HKD2_k127_9673158_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 589.0
HKD2_k127_9673158_1 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 544.0
HKD2_k127_9673158_10 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000006042 167.0
HKD2_k127_9673158_2 penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008431 473.0
HKD2_k127_9673158_3 PFAM peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 447.0
HKD2_k127_9673158_4 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 404.0
HKD2_k127_9673158_5 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 332.0
HKD2_k127_9673158_6 PFAM NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 329.0
HKD2_k127_9673158_7 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065,K13252 - 2.1.3.3,2.1.3.6,2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 312.0
HKD2_k127_9673158_8 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000001968 254.0
HKD2_k127_9673158_9 Regulates arginine biosynthesis genes K03402 - - 0.0000000000000000000000000000000000000000001211 163.0
HKD2_k127_9806303_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 602.0
HKD2_k127_9806303_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 364.0
HKD2_k127_9806303_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000255 258.0
HKD2_k127_9806303_3 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000002421 180.0
HKD2_k127_9806303_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000003584 88.0
HKD2_k127_9806303_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000002267 73.0
HKD2_k127_9806303_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.0000143 51.0