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Overview

ID MAG02347
Name MMD1_bin.29
Sample SMP0058
Taxonomy
Kingdom Bacteria
Phylum Nitrospirota
Class UBA9217
Order UBA9217
Family UBA9217
Genus
Species
Assembly information
Completeness (%) 85.38
Contamination (%) 1.8
GC content (%) 62.0
N50 (bp) 16,742
Genome size (bp) 3,095,869

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2841

Gene name Description KEGG GOs EC E-value Score Sequence
MMD1_k127_1014324_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 8.195e-203 638.0
MMD1_k127_1014324_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 313.0
MMD1_k127_1014324_2 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.00000000000000000000000000000000000000000000000000000000000002488 220.0
MMD1_k127_1014324_3 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.00000000006757 65.0
MMD1_k127_1017044_0 PFAM AMP-dependent synthetase and ligase K01897,K18661 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 543.0
MMD1_k127_1017044_1 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000099 253.0
MMD1_k127_1041015_0 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 436.0
MMD1_k127_1041015_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000008052 225.0
MMD1_k127_1041015_2 histidine kinase A domain protein - - - 0.000000000000003583 90.0
MMD1_k127_1041015_3 - - - - 0.0000000000008992 76.0
MMD1_k127_1084689_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007008 287.0
MMD1_k127_1084689_1 Cytidine monophosphokinase K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000000000000000000000000002126 239.0
MMD1_k127_1089026_0 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000000000000000001878 198.0
MMD1_k127_1089026_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000000154 130.0
MMD1_k127_1100595_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 3.426e-216 689.0
MMD1_k127_1100595_1 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 2.667e-210 662.0
MMD1_k127_1100595_10 Cytochrome C oxidase, mono-heme subunit/FixO K00405,K15862 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000007601 227.0
MMD1_k127_1100595_11 PFAM iron dependent repressor K03709 - - 0.000000000000000000000000000000000000000000000000000000005379 206.0
MMD1_k127_1100595_12 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000006494 188.0
MMD1_k127_1100595_13 Chromate resistance - - - 0.0000000000000000000000000000000000000000000000003962 179.0
MMD1_k127_1100595_14 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000005676 176.0
MMD1_k127_1100595_15 FecR protein - - - 0.0000000000000000000000000000000000000004053 158.0
MMD1_k127_1100595_16 Domain of unknown function (DUF4416) - - - 0.0000000000000000000000000000000000002758 146.0
MMD1_k127_1100595_17 transcriptional regulator, Rrf2 family - - - 0.000000000000000000000000000007313 123.0
MMD1_k127_1100595_18 PFAM response regulator receiver - - - 0.0000000000000000000000007891 109.0
MMD1_k127_1100595_19 SMART metal-dependent phosphohydrolase, HD region K06950 - - 0.0000000000000008517 81.0
MMD1_k127_1100595_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 496.0
MMD1_k127_1100595_20 PFAM Cytochrome c, class I K00406 - - 0.000000000003405 71.0
MMD1_k127_1100595_21 Cbb3-type cytochrome oxidase component FixQ - - - 0.00000001652 56.0
MMD1_k127_1100595_22 Domain of unknown function (DUF4388) - - - 0.0002242 50.0
MMD1_k127_1100595_3 Chromate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 446.0
MMD1_k127_1100595_4 Transglycosylase K05366,K21464 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 455.0
MMD1_k127_1100595_5 S-layer homology domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 341.0
MMD1_k127_1100595_6 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 312.0
MMD1_k127_1100595_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000164 251.0
MMD1_k127_1100595_8 SMART metal-dependent phosphohydrolase, HD region K06950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001782 245.0
MMD1_k127_1100595_9 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001378 250.0
MMD1_k127_1117185_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006441 572.0
MMD1_k127_1117185_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003464 465.0
MMD1_k127_1117185_2 Sigma-54 interaction domain K02481,K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 436.0
MMD1_k127_1117185_4 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000000000000000003621 147.0
MMD1_k127_1117185_5 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000000000451 144.0
MMD1_k127_1117185_6 Uncharacterized conserved protein (DUF2277) - - - 0.0000000000000000000000000000005968 123.0
MMD1_k127_1117185_7 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000002637 132.0
MMD1_k127_114358_0 NUBPL iron-transfer P-loop NTPase K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000557 422.0
MMD1_k127_114358_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000005144 189.0
MMD1_k127_114358_2 Helix-turn-helix domain - - - 0.00002705 47.0
MMD1_k127_1152835_0 S-adenosylmethionine synthetase, C-terminal domain K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005003 545.0
MMD1_k127_1193664_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 1.654e-202 638.0
MMD1_k127_1193664_1 helicase K03722 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 545.0
MMD1_k127_1193664_10 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.000000000000000002148 90.0
MMD1_k127_1193664_11 Tetratricopeptide repeat - - - 0.000000000009621 72.0
MMD1_k127_1193664_13 PFAM ATP-binding region, ATPase domain protein - - - 0.000000001507 69.0
MMD1_k127_1193664_14 Response regulator receiver domain - - - 0.0001481 53.0
MMD1_k127_1193664_15 - - - - 0.0005837 53.0
MMD1_k127_1193664_2 Cys Met metabolism K01739 - 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 383.0
MMD1_k127_1193664_3 Curli production assembly/transport component CsgG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 360.0
MMD1_k127_1193664_4 Lipoprotein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 355.0
MMD1_k127_1193664_5 cog0421, spermidine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001532 259.0
MMD1_k127_1193664_6 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000004171 164.0
MMD1_k127_1193664_7 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000008586 163.0
MMD1_k127_1193664_8 - K07112 - - 0.000000000000000000000000000000005086 134.0
MMD1_k127_1193664_9 Domain of unknown function (DUF386) - - - 0.0000000000000000000000000122 115.0
MMD1_k127_1197251_0 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 427.0
MMD1_k127_1197251_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621,K21576,K21577 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.21.4.2,1.21.4.3,1.21.4.4,2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000472 372.0
MMD1_k127_1197251_10 oligosaccharyl transferase activity - - - 0.00000000000000000000001296 118.0
MMD1_k127_1197251_11 protein N-acetylglucosaminyltransferase activity K09667 - 2.4.1.255 0.000000000000001967 91.0
MMD1_k127_1197251_12 Methionine biosynthesis protein MetW - - - 0.00000000000001854 81.0
MMD1_k127_1197251_13 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000001889 77.0
MMD1_k127_1197251_14 Aldo/keto reductase family K06221 - 1.1.1.346 0.000000002054 65.0
MMD1_k127_1197251_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 293.0
MMD1_k127_1197251_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000002246 247.0
MMD1_k127_1197251_4 rRNA (adenine-N6,N6-)-dimethyltransferase activity K02528,K20444 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.0000000000000000000000000000000000000000000000000001102 194.0
MMD1_k127_1197251_5 Beta-lactamase K17836 - 3.5.2.6 0.000000000000000000000000000000000000000000000649 179.0
MMD1_k127_1197251_6 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000009283 169.0
MMD1_k127_1197251_7 PFAM aldo keto reductase - - - 0.0000000000000000000000000000003277 128.0
MMD1_k127_1197251_8 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000003505 114.0
MMD1_k127_1197251_9 Hep Hag repeat protein - - - 0.00000000000000000000000475 116.0
MMD1_k127_1236527_0 Sugar (and other) transporter K03446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 604.0
MMD1_k127_1236527_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 574.0
MMD1_k127_1236527_10 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.0000000000000000000000000000000000000000000000000000000000003255 218.0
MMD1_k127_1236527_11 Male sterility protein K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000007067 225.0
MMD1_k127_1236527_12 DoxX K15977 - - 0.000000000000000000000000000000000000000000000000000002669 197.0
MMD1_k127_1236527_13 protein homotetramerization - GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005267,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015267,GO:0015318,GO:0015672,GO:0016043,GO:0022607,GO:0022803,GO:0022838,GO:0022840,GO:0022841,GO:0022842,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0043933,GO:0044085,GO:0046873,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055085,GO:0065003,GO:0071804,GO:0071805,GO:0071840,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000007318 188.0
MMD1_k127_1236527_14 MarR family transcriptional K15973 - - 0.000000000000000000000000000000000000000000000004968 176.0
MMD1_k127_1236527_15 Belongs to the Fur family K03711,K09825 - - 0.00000000000000000000000000000000000000000000005892 173.0
MMD1_k127_1236527_16 - - - - 0.0000000000000000000000000000000000000007075 156.0
MMD1_k127_1236527_17 phosphohistidine phosphatase, SixA K03574,K08296 - 3.6.1.55 0.000000000000000000000000000000000000003318 151.0
MMD1_k127_1236527_18 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000001854 141.0
MMD1_k127_1236527_19 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000001433 122.0
MMD1_k127_1236527_2 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 421.0
MMD1_k127_1236527_20 DUF218 domain - - - 0.0000000000000000000000000001886 124.0
MMD1_k127_1236527_21 Iron-binding zinc finger CDGSH type - - - 0.00000000000000000000000005158 108.0
MMD1_k127_1236527_22 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000001513 106.0
MMD1_k127_1236527_23 Zinc finger cdgsh-type domain protein - - - 0.0000000000000000000001615 98.0
MMD1_k127_1236527_24 Thioredoxin K03672 - 1.8.1.8 0.000000000000000006902 90.0
MMD1_k127_1236527_25 Flavin reductase like domain - - - 0.000000000000002767 77.0
MMD1_k127_1236527_26 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.000000000001979 77.0
MMD1_k127_1236527_28 Belongs to the TPP enzyme family K00156,K00158 - 1.2.3.3,1.2.5.1 0.0000001174 59.0
MMD1_k127_1236527_3 PFAM secretion protein HlyD family protein K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009867 298.0
MMD1_k127_1236527_4 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 285.0
MMD1_k127_1236527_5 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000465 284.0
MMD1_k127_1236527_6 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006251 264.0
MMD1_k127_1236527_7 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001345 267.0
MMD1_k127_1236527_8 PFAM Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007515 245.0
MMD1_k127_1236527_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000168 228.0
MMD1_k127_1260022_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.436e-242 762.0
MMD1_k127_1260022_1 Histone deacetylase domain K04768 - - 0.000000000000000000002741 96.0
MMD1_k127_126348_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 563.0
MMD1_k127_126348_1 protein involved in outer membrane biogenesis K07290 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0032386,GO:0032879,GO:0032880,GO:0033157,GO:0044464,GO:0050789,GO:0051049,GO:0051223,GO:0060341,GO:0065007,GO:0070201,GO:0071944,GO:0090087,GO:0090313,GO:1903533,GO:1903827,GO:1905475 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 357.0
MMD1_k127_126348_2 MacB-like periplasmic core domain K02004 - - 0.000000004777 57.0
MMD1_k127_126348_3 - - - - 0.00000003508 60.0
MMD1_k127_1273156_0 Sigma-54 interaction domain - - - 6.867e-207 661.0
MMD1_k127_1273156_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008258 349.0
MMD1_k127_1273156_2 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000000003526 130.0
MMD1_k127_1273156_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000009479 108.0
MMD1_k127_1273156_4 PFAM amino acid-binding ACT domain protein - - - 0.000003613 56.0
MMD1_k127_1289188_0 IMG reference gene - - - 0.00000000000000000000000000000000000000000000000000000000000000007911 232.0
MMD1_k127_1289188_1 Thioredoxin-like domain K03671 - - 0.00000000000000000000000000000000000000000001312 164.0
MMD1_k127_1289188_2 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.0000000000000000000000000000000000005014 162.0
MMD1_k127_1289188_3 Thioredoxin-like - - - 0.000000000000000000000000000000004502 135.0
MMD1_k127_1289188_4 4Fe-4S dicluster domain - - - 0.00000000002416 67.0
MMD1_k127_129011_0 Arginyl tRNA synthetase N terminal dom K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 593.0
MMD1_k127_129011_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 500.0
MMD1_k127_129011_10 Fe-S iron-sulfur cluster assembly protein, NifU family K04488 - - 0.000000000000000000000000000000000000000000000000000000004072 201.0
MMD1_k127_129011_11 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000000001974 198.0
MMD1_k127_129011_12 RNA 2'-O ribose methyltransferase substrate binding K03437 - - 0.0000000000000000000000000000000000000000000000000000006582 203.0
MMD1_k127_129011_13 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000866 163.0
MMD1_k127_129011_14 TIGRFAM transcriptional regulator, Rrf2 family - - - 0.00000000000000000000000000000000000000007908 156.0
MMD1_k127_129011_15 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000006005 153.0
MMD1_k127_129011_16 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00812 - 2.6.1.1 0.000000000000000000000000000000001362 132.0
MMD1_k127_129011_17 Preprotein translocase subunit K03210 - - 0.000000000000000000000000000012 121.0
MMD1_k127_129011_18 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000004308 114.0
MMD1_k127_129011_19 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000003872 97.0
MMD1_k127_129011_2 COG1104 Cysteine sulfinate desulfinase cysteine desulfurase K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 487.0
MMD1_k127_129011_20 PFAM 4Fe-4S ferredoxin - - - 0.00000000000000003423 85.0
MMD1_k127_129011_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 480.0
MMD1_k127_129011_4 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009151 427.0
MMD1_k127_129011_5 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 406.0
MMD1_k127_129011_6 Mechanosensitive ion channel K03442 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 362.0
MMD1_k127_129011_7 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 334.0
MMD1_k127_129011_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008394 306.0
MMD1_k127_129011_9 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000002073 212.0
MMD1_k127_13167_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000903 333.0
MMD1_k127_13167_1 Pterin binding enzyme K00548,K15023 - 2.1.1.13,2.1.1.258 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 322.0
MMD1_k127_13167_2 thymidylate synthase (FAD) activity K03465 - 2.1.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 310.0
MMD1_k127_13167_3 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006884 280.0
MMD1_k127_13167_4 Domain of unknown function (DUF2520) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003974 256.0
MMD1_k127_13167_5 CO dehydrogenase/acetyl-CoA synthase delta subunit K00194 - 2.1.1.245 0.0000000000000000000000000000005967 126.0
MMD1_k127_13167_6 CO dehydrogenase acetyl-CoA synthase K00194 - 2.1.1.245 0.00000000006293 64.0
MMD1_k127_13167_7 Glutathione S-transferase, N-terminal domain - - - 0.00000001245 58.0
MMD1_k127_1423434_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 321.0
MMD1_k127_1423434_1 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000001908 233.0
MMD1_k127_1423434_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000000001777 220.0
MMD1_k127_1423434_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000004513 177.0
MMD1_k127_1423434_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000009494 166.0
MMD1_k127_1423434_5 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000005824 89.0
MMD1_k127_1423434_6 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000009315 62.0
MMD1_k127_1472066_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009829 589.0
MMD1_k127_1472066_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 410.0
MMD1_k127_1472066_10 histidine kinase HAMP region domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000001579 210.0
MMD1_k127_1472066_11 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000000008695 190.0
MMD1_k127_1472066_12 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000002647 183.0
MMD1_k127_1472066_13 histidine kinase HAMP region domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000138 197.0
MMD1_k127_1472066_14 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000652 175.0
MMD1_k127_1472066_15 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000002616 189.0
MMD1_k127_1472066_16 50S ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000003561 148.0
MMD1_k127_1472066_17 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000001507 144.0
MMD1_k127_1472066_18 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000000009164 142.0
MMD1_k127_1472066_19 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000007248 94.0
MMD1_k127_1472066_2 PFAM sigma-54 factor interaction domain-containing protein K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 359.0
MMD1_k127_1472066_20 Ribosomal protein L30p/L7e K02907 - - 0.00000000000002302 76.0
MMD1_k127_1472066_21 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000002743 66.0
MMD1_k127_1472066_3 Methionine aminopeptidase K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006047 319.0
MMD1_k127_1472066_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004996 302.0
MMD1_k127_1472066_5 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009653 308.0
MMD1_k127_1472066_6 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000115 253.0
MMD1_k127_1472066_7 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000002415 213.0
MMD1_k127_1472066_8 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000002229 199.0
MMD1_k127_1472066_9 Ribosomal protein L6 K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000001071 197.0
MMD1_k127_1486244_0 Sulfatase - - - 3.27e-239 757.0
MMD1_k127_1486244_1 FAD binding domain K00278 - 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 590.0
MMD1_k127_1486244_10 Bacterial capsule synthesis protein PGA_cap - - - 0.000000000000000000006741 104.0
MMD1_k127_1486244_12 Transcriptional regulatory protein, C terminal - - - 0.0001707 53.0
MMD1_k127_1486244_2 Seven times multi-haem cytochrome CxxCH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 390.0
MMD1_k127_1486244_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003412 329.0
MMD1_k127_1486244_4 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 301.0
MMD1_k127_1486244_5 D-alanyl-D-alanine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000177 265.0
MMD1_k127_1486244_6 ferredoxin-thioredoxin reductase activity - - - 0.000000000000000000000000000000000000000003659 156.0
MMD1_k127_1486244_7 Outer membrane lipoprotein Slp family K07285 - - 0.00000000000000000000000000000000000006109 151.0
MMD1_k127_1486244_8 YARHG - - - 0.000000000000000000000000000000009236 140.0
MMD1_k127_1486244_9 PFAM Glutaredoxin K06191 - - 0.0000000000000000000000004825 106.0
MMD1_k127_1487702_0 beta-glucosidase activity K05350 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006743 583.0
MMD1_k127_1487702_1 transferase activity, transferring glycosyl groups K00720 - 2.4.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 378.0
MMD1_k127_1487702_2 phosphate regulon transcriptional regulatory protein PhoB K07657,K07659 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002539 251.0
MMD1_k127_1487702_3 - - - - 0.000000000000000000000001088 117.0
MMD1_k127_1487702_4 PHP domain protein K07053 - 3.1.3.97 0.0000000000000000000005069 97.0
MMD1_k127_1487702_5 Phosphoesterase - - - 0.00000001073 57.0
MMD1_k127_1499249_0 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009275 316.0
MMD1_k127_1501501_0 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K15738 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 - 3.01e-238 754.0
MMD1_k127_1501501_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 519.0
MMD1_k127_1501501_10 GGDEF domain - - - 0.000000000000000000000000000000000196 148.0
MMD1_k127_1501501_11 GGDEF domain - - - 0.000000000000000000000000002268 119.0
MMD1_k127_1501501_12 - - - - 0.00000000000000000000002857 106.0
MMD1_k127_1501501_13 metal-dependent phosphohydrolase HD region K07814 - - 0.000000000000000003367 98.0
MMD1_k127_1501501_2 PFAM Radical SAM domain protein K22227 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 461.0
MMD1_k127_1501501_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 396.0
MMD1_k127_1501501_4 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 396.0
MMD1_k127_1501501_5 PFAM ADP-ribosylation Crystallin J1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 347.0
MMD1_k127_1501501_6 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 326.0
MMD1_k127_1501501_7 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 316.0
MMD1_k127_1501501_8 Protein of unknown function (DUF3365) - - - 0.0000000000000000000000000000000000000000000000000000000009283 209.0
MMD1_k127_1501501_9 HNH nucleases - - - 0.000000000000000000000000000000000000000001513 158.0
MMD1_k127_1505172_0 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 314.0
MMD1_k127_1505172_1 PFAM ABC transporter related K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000006355 226.0
MMD1_k127_1512927_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 357.0
MMD1_k127_1512927_1 Cell wall formation K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 355.0
MMD1_k127_1512927_2 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000001135 233.0
MMD1_k127_1512927_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000001317 234.0
MMD1_k127_1512927_4 Essential cell division protein K03589 - - 0.000000000007257 76.0
MMD1_k127_1516279_0 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 1.839e-249 793.0
MMD1_k127_1516279_1 alpha-2-macroglobulin domain protein K06894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004881 576.0
MMD1_k127_1516279_2 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000104 145.0
MMD1_k127_1520752_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1004.0
MMD1_k127_1520752_1 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 - 1.2.7.11,1.2.7.3 1.113e-239 752.0
MMD1_k127_1520752_10 mRNA catabolic process - - - 0.00000000000000000000000000000000000000000000003405 184.0
MMD1_k127_1520752_11 diguanylate cyclase K02488,K21022 - 2.7.7.65 0.0000000000000000000000000000000000000000008296 169.0
MMD1_k127_1520752_12 PFAM metal-dependent phosphohydrolase, HD sub domain K06950 - - 0.00000000000000000000000000000000000000695 152.0
MMD1_k127_1520752_13 nitrate reductase activity K03390,K16887,K18930 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000001151 108.0
MMD1_k127_1520752_14 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000001953 108.0
MMD1_k127_1520752_15 Putative zinc-finger - - - 0.00000000000000000000003172 112.0
MMD1_k127_1520752_16 Glutaredoxin K03676 - - 0.00000000000004776 72.0
MMD1_k127_1520752_2 Domain of unknown function (DUF4139) - - - 9.53e-202 640.0
MMD1_k127_1520752_3 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 439.0
MMD1_k127_1520752_4 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 429.0
MMD1_k127_1520752_5 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 354.0
MMD1_k127_1520752_6 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004075 286.0
MMD1_k127_1520752_7 Protein of unknown function (DUF1499) - - - 0.0000000000000000000000000000000000000000000000000000000000002562 220.0
MMD1_k127_1520752_8 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000003054 205.0
MMD1_k127_1520752_9 metal cluster binding - - - 0.00000000000000000000000000000000000000000000000001371 187.0
MMD1_k127_152335_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.0 1045.0
MMD1_k127_152335_1 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 - 1.6.5.3 6.09e-243 765.0
MMD1_k127_152335_2 Molybdopterin oxidoreductase Fe4S4 domain K00123,K22341 - 1.17.1.11,1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 616.0
MMD1_k127_152335_3 molybdopterin oxidoreductase Fe4S4 region K05299 - 1.17.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 481.0
MMD1_k127_152335_4 CO-methylating acetyl-CoA synthase activity K00193,K14138 - 2.3.1.169 0.0000000000000000000000000000000000000000000000000000000002585 205.0
MMD1_k127_152335_5 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000008914 194.0
MMD1_k127_152335_6 PIN domain - - - 0.0000000000000000000000000000002369 130.0
MMD1_k127_152335_7 cyclic nucleotide-binding K10914 - - 0.0000000000004235 76.0
MMD1_k127_152335_8 toxin-antitoxin pair type II binding K06284 - - 0.000000003354 63.0
MMD1_k127_1524899_0 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 601.0
MMD1_k127_1524899_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 494.0
MMD1_k127_1524899_2 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001878 271.0
MMD1_k127_1524899_3 Belongs to the HesB IscA family K13628,K15724 - - 0.00001046 53.0
MMD1_k127_1524899_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018065,GO:0018130,GO:0018160,GO:0018193,GO:0018198,GO:0019438,GO:0019538,GO:0033013,GO:0033014,GO:0034641,GO:0036211,GO:0042168,GO:0042440,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.0001668 44.0
MMD1_k127_1526833_0 General secretion pathway protein F K02455,K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 366.0
MMD1_k127_1526833_1 general secretion pathway protein G K02456 - - 0.000000000000000000000000000000000000000000000000002395 188.0
MMD1_k127_1526833_2 PFAM Type II secretion system protein E K02454 - - 0.000000000000000000003498 94.0
MMD1_k127_1526833_3 general secretion pathway protein - - - 0.000000000000003199 82.0
MMD1_k127_1526833_4 Prokaryotic N-terminal methylation motif - - - 0.000000000007541 71.0
MMD1_k127_1526833_5 PFAM General secretion pathway protein K K02460 - - 0.000000002867 67.0
MMD1_k127_1526833_6 Prokaryotic N-terminal methylation motif K02459 - - 0.00002544 54.0
MMD1_k127_1532663_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 477.0
MMD1_k127_1532663_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 368.0
MMD1_k127_1532663_2 PFAM Polynucleotide adenylyltransferase region K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000002455 232.0
MMD1_k127_1532663_3 Domain of unknown function (DUF4145) - - - 0.0000000000000000000000000000000000000000000001873 176.0
MMD1_k127_1532663_4 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000000000000000000000132 157.0
MMD1_k127_1532663_5 protein kinase activity - - - 0.0000000000000000000009442 107.0
MMD1_k127_1532663_6 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.00000000291 61.0
MMD1_k127_1532663_7 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.00003167 49.0
MMD1_k127_1535941_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008132 352.0
MMD1_k127_1535941_1 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000001183 189.0
MMD1_k127_1535941_2 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000002689 174.0
MMD1_k127_1539291_0 PEP-utilising enzyme, N-terminal K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 603.0
MMD1_k127_1539291_1 PFAM V-type ATPase 116 kDa K02123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 584.0
MMD1_k127_1539291_10 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000043 297.0
MMD1_k127_1539291_11 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000141 273.0
MMD1_k127_1539291_12 Transglycosylase SLT domain K06381,K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000005675 248.0
MMD1_k127_1539291_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001061 240.0
MMD1_k127_1539291_14 - - - - 0.000000000000000000000000000000000000000000000000000000002358 216.0
MMD1_k127_1539291_15 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000005773 203.0
MMD1_k127_1539291_16 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000009937 177.0
MMD1_k127_1539291_17 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000000000000000000000000000000000000002484 163.0
MMD1_k127_1539291_18 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.0000000000000000000000000000000000139 145.0
MMD1_k127_1539291_19 PTS system mannose/fructose/sorbose family IID component K02796 - - 0.00000000000000000000000000000000009052 143.0
MMD1_k127_1539291_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0034220,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044464,GO:0044769,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132,GO:1902600 3.6.3.14,3.6.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 565.0
MMD1_k127_1539291_21 phosphoenolpyruvate-dependent sugar phosphotransferase system K02768,K02769,K02770,K02806 - 2.7.1.202 0.0000000000000000000000000000001797 128.0
MMD1_k127_1539291_22 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.000000000000000000000000000001251 125.0
MMD1_k127_1539291_23 COG2893 Phosphotransferase system, mannose fructose-specific component IIA K02793 - 2.7.1.191 0.000000000000000000000000000003963 123.0
MMD1_k127_1539291_24 PTS system sorbose subfamily IIB component K02794 - 2.7.1.191 0.0000000000000000000000000001977 120.0
MMD1_k127_1539291_25 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.0000000000000000000000000002865 121.0
MMD1_k127_1539291_26 Produces ATP from ADP in the presence of a proton gradient across the membrane K02122 - - 0.000000000000000000000001302 111.0
MMD1_k127_1539291_27 PFAM Membrane protein of K08972 - - 0.00000000000000000000000203 108.0
MMD1_k127_1539291_28 OstA-like protein K09774 - - 0.000000000000000000000006497 109.0
MMD1_k127_1539291_29 ATP hydrolysis coupled proton transport K02110,K02124 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000001039 99.0
MMD1_k127_1539291_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008231 492.0
MMD1_k127_1539291_30 Phosphocarrier protein HPr K08485,K11189 - - 0.0000000000000000000007719 102.0
MMD1_k127_1539291_31 ATP-binding region, ATPase domain protein - - - 0.00000000000000000002355 104.0
MMD1_k127_1539291_32 PTS system sorbose-specific iic component K02795 - - 0.000000000000000008888 93.0
MMD1_k127_1539291_33 PFAM Cobalt transport protein K02008 - - 0.000000000000001597 88.0
MMD1_k127_1539291_34 Protein conserved in bacteria K11719 - - 0.000000001686 66.0
MMD1_k127_1539291_35 ATP synthase subunit D K02120 - - 0.0000009881 50.0
MMD1_k127_1539291_36 Histidine Phosphotransfer domain - - - 0.0000154 57.0
MMD1_k127_1539291_4 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 439.0
MMD1_k127_1539291_5 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004941 403.0
MMD1_k127_1539291_6 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 348.0
MMD1_k127_1539291_7 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008563 316.0
MMD1_k127_1539291_8 ATPases associated with a variety of cellular activities K02006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 310.0
MMD1_k127_1539291_9 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 287.0
MMD1_k127_1562971_0 glucose sorbosone K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 439.0
MMD1_k127_1562971_1 Flavodoxin-like fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001308 273.0
MMD1_k127_1562971_2 Sigma-54 interaction domain K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000005931 228.0
MMD1_k127_1562971_3 methyltransferase activity - - - 0.000000000000000000000000000000000000000000042 181.0
MMD1_k127_1562971_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000002723 146.0
MMD1_k127_1562971_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000003046 143.0
MMD1_k127_1562971_6 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000000198 142.0
MMD1_k127_1567404_0 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 361.0
MMD1_k127_1567404_1 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000005132 208.0
MMD1_k127_1567404_2 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000001041 120.0
MMD1_k127_1567404_3 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.00000000009533 63.0
MMD1_k127_1582478_0 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004953 580.0
MMD1_k127_1582478_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000794 385.0
MMD1_k127_1582478_2 AAA domain, putative AbiEii toxin, Type IV TA system K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 321.0
MMD1_k127_1587943_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 515.0
MMD1_k127_1587943_1 ABC1 family K03688 - - 0.0000000000000000000000015 106.0
MMD1_k127_1587943_2 - - - - 0.0000000003245 65.0
MMD1_k127_1592554_0 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008873 468.0
MMD1_k127_1592554_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 308.0
MMD1_k127_1592554_2 PFAM Cysteine-rich domain K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005229 260.0
MMD1_k127_1592554_3 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.000000000000000000000000000000000000005089 163.0
MMD1_k127_1592554_4 SpoVT / AbrB like domain - - - 0.00000000000000000004766 93.0
MMD1_k127_1592554_5 regulatory protein, FmdB family - - - 0.0000000001309 65.0
MMD1_k127_1592554_6 L,D-transpeptidase catalytic domain - - - 0.0000000533 54.0
MMD1_k127_1627303_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 8.814e-263 823.0
MMD1_k127_1627303_1 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006456 580.0
MMD1_k127_1627303_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 550.0
MMD1_k127_1627303_3 Phospholipase, patatin family K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 339.0
MMD1_k127_1627303_4 PFAM Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001491 282.0
MMD1_k127_1627303_5 SMART ATP-binding region, ATPase-like - - - 0.0000000000000000000000000000000000000000000000000000001891 216.0
MMD1_k127_1627303_6 helix_turn_helix, Lux Regulon K07696 - - 0.00000001363 66.0
MMD1_k127_1627303_7 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0000005593 55.0
MMD1_k127_1636831_0 sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 386.0
MMD1_k127_1636831_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K03438,K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009249,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0031224,GO:0031226,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000002072 233.0
MMD1_k127_1636831_2 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000007558 238.0
MMD1_k127_1636831_3 protein phosphatase 2C domain protein K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000003526 207.0
MMD1_k127_1636831_4 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000001354 68.0
MMD1_k127_164561_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821,K09251 - 2.6.1.11,2.6.1.17,2.6.1.82 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 594.0
MMD1_k127_164561_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000588 534.0
MMD1_k127_164561_10 Domain present in PSD-95, Dlg, and ZO-1/2. K02452 - - 0.00000000000000000000000000000005125 137.0
MMD1_k127_164561_11 - - - - 0.000000000008764 70.0
MMD1_k127_164561_12 PFAM Type II secretion system protein E K02454,K02652,K12276 - - 0.00001455 56.0
MMD1_k127_164561_2 Ion transport 2 domain protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000813 486.0
MMD1_k127_164561_3 PFAM nickel-dependent hydrogenase large subunit K00436,K14126 - 1.12.1.2,1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 472.0
MMD1_k127_164561_4 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009042 458.0
MMD1_k127_164561_5 Ecdysteroid kinase K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 462.0
MMD1_k127_164561_6 Type II and III secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 419.0
MMD1_k127_164561_7 Oxidoreductase FAD-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 400.0
MMD1_k127_164561_8 NADH ubiquinone oxidoreductase 20 kDa subunit K14128 - 1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002995 383.0
MMD1_k127_164561_9 Glutamine amidotransferase class-I - - - 0.000000000000000000000000000000000000000000000000000000000000000003782 232.0
MMD1_k127_1692659_0 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 422.0
MMD1_k127_1692659_1 HI0933-like protein K00313 - - 0.000000000000000000000000000000000001823 163.0
MMD1_k127_1692659_2 acyl-CoA dehydrogenase activity K06446 - - 0.000000000000000000000000000000001736 153.0
MMD1_k127_1692659_3 Belongs to the SfsA family K06206 - - 0.0000000000000000000000000007977 115.0
MMD1_k127_1692659_4 - - - - 0.00000000000000000000001788 106.0
MMD1_k127_1692659_5 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.0000000000001796 87.0
MMD1_k127_1692659_6 Protein of unknown function (DUF3592) - - - 0.0000000000002967 76.0
MMD1_k127_1692659_7 Cellulose 1,4-beta-cellobiosidase - - - 0.00000007512 66.0
MMD1_k127_1712254_0 Bacterial Ig-like domain 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 319.0
MMD1_k127_1712254_1 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 GO:0003674,GO:0003824,GO:0003963,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009975,GO:0016874,GO:0016886,GO:0044424,GO:0044464,GO:0140098 6.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000002236 274.0
MMD1_k127_1712254_2 Protein of unknown function (DUF1566) - - - 0.00000000000000000000000000007847 135.0
MMD1_k127_1712254_3 Protein of Unknown function (DUF2784) - - - 0.0000000000000008213 82.0
MMD1_k127_1712254_4 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000007545 59.0
MMD1_k127_1712254_5 cheY-homologous receiver domain K02658 - - 0.00000004778 64.0
MMD1_k127_1729640_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 2.349e-195 616.0
MMD1_k127_1729640_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 417.0
MMD1_k127_1729640_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000006879 254.0
MMD1_k127_1729640_3 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000004216 199.0
MMD1_k127_1741104_0 Permease YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000002456 232.0
MMD1_k127_1741104_1 - - - - 0.000000000000000000000000000000000000000000000000000000000007049 214.0
MMD1_k127_1741104_2 PFAM permease YjgP YjgQ family protein K07091 - - 0.00000000000000000000000000000000000000000000000000000003481 213.0
MMD1_k127_1741104_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000000000000004863 183.0
MMD1_k127_1753253_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000000000000000000000000000000000000000000006069 206.0
MMD1_k127_1753253_1 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000004649 203.0
MMD1_k127_1753253_2 Probable molybdopterin binding domain - - - 0.000000000000000000000000001611 113.0
MMD1_k127_1753253_3 - - - - 0.0000000000000003051 88.0
MMD1_k127_1766258_0 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 317.0
MMD1_k127_1766258_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960,K20810 GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0050270 3.5.4.28,3.5.4.31,3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000009328 231.0
MMD1_k127_1766258_2 Pfam:N_methyl_2 K02650 - - 0.0000000000000000000000006452 112.0
MMD1_k127_1766258_3 ABC-2 family transporter protein - - - 0.0004975 47.0
MMD1_k127_1775052_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 6.661e-219 707.0
MMD1_k127_1775052_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 489.0
MMD1_k127_1775843_0 glycosyl transferase family 2 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003987 274.0
MMD1_k127_1775843_1 PFAM Lytic transglycosylase catalytic K08309 - - 0.0000000000000000000000000000000000000000009744 166.0
MMD1_k127_1775843_2 Transcriptional regulator, LysR - - - 0.000000000000000000000000000008173 126.0
MMD1_k127_1775843_3 Uncharacterized conserved protein (DUF2304) K09153 - - 0.000000000000000000001665 98.0
MMD1_k127_1775843_4 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.000000000006092 72.0
MMD1_k127_1800258_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 7.378e-233 746.0
MMD1_k127_1800258_1 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 493.0
MMD1_k127_1800258_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000003877 266.0
MMD1_k127_1800258_3 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001643 258.0
MMD1_k127_1800258_4 Signal transduction histidine kinase, nitrogen specific, NtrB K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000001165 224.0
MMD1_k127_1800258_5 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000146 181.0
MMD1_k127_1800258_6 protein with SCP PR1 domains - - - 0.000000000000004033 79.0
MMD1_k127_1800258_7 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.0000000001073 76.0
MMD1_k127_1800258_8 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000005043 68.0
MMD1_k127_1800258_9 Cytochrome D1 heme domain - - - 0.00001521 57.0
MMD1_k127_1814968_0 Protein of unknown function (DUF401) K09133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004293 332.0
MMD1_k127_1814968_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006154 278.0
MMD1_k127_1814968_2 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000181 278.0
MMD1_k127_1814968_3 COG1404 Subtilisin-like serine proteases K13276 GO:0005575,GO:0005576 - 0.0000000000000000000000533 113.0
MMD1_k127_1814968_4 energy transducer activity K03832 - - 0.00000000000000000002349 102.0
MMD1_k127_1814968_5 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000005312 83.0
MMD1_k127_1849566_0 PFAM sigma-54 factor interaction domain-containing protein K02481,K07714,K10943 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006787 450.0
MMD1_k127_1849566_1 PFAM ATP-binding region, ATPase domain protein K02668,K07708,K07709 - 2.7.13.3 0.000000000000000000000000000000000001616 142.0
MMD1_k127_1849566_2 methyltransferase - - - 0.0000000000000000000000000000000007753 138.0
MMD1_k127_1849566_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000402 98.0
MMD1_k127_186367_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 461.0
MMD1_k127_186367_1 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000002228 161.0
MMD1_k127_1878252_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 509.0
MMD1_k127_1880148_0 methyltransferase activity - - - 0.00000000000000000000005907 106.0
MMD1_k127_1880148_1 Protein of unknown function DUF116 - - - 0.00000000000000000006359 96.0
MMD1_k127_1880148_2 Glycosyl hydrolase family 3 N terminal domain - - - 0.0001409 46.0
MMD1_k127_1915776_0 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009899 456.0
MMD1_k127_1915776_1 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 316.0
MMD1_k127_1915776_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001945 256.0
MMD1_k127_1915776_3 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000000000000000000000001564 222.0
MMD1_k127_1915776_4 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000000000000000005008 183.0
MMD1_k127_1915776_5 - - - - 0.000000000000000000000000224 110.0
MMD1_k127_1915776_6 Nitroreductase family - - - 0.00000000000000000006485 93.0
MMD1_k127_1915776_7 Nitroreductase family - - - 0.000000004011 59.0
MMD1_k127_197599_0 General secretory system II, protein E domain protein K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005292 611.0
MMD1_k127_197599_1 Type II secretory pathway, pseudopilin - - - 0.0000000000000000000000000000000004542 138.0
MMD1_k127_197599_2 Transglutaminase-like - - - 0.0001002 57.0
MMD1_k127_1992762_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 567.0
MMD1_k127_1992762_1 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008686 461.0
MMD1_k127_1992762_10 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000003809 213.0
MMD1_k127_1992762_11 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000009774 198.0
MMD1_k127_1992762_12 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000000006842 137.0
MMD1_k127_1992762_13 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000001296 108.0
MMD1_k127_1992762_14 transferase activity, transferring glycosyl groups - - - 0.0000000000001183 81.0
MMD1_k127_1992762_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000486 385.0
MMD1_k127_1992762_3 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008308 361.0
MMD1_k127_1992762_4 Protein of unknown function (DUF1009) K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 327.0
MMD1_k127_1992762_5 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007526 307.0
MMD1_k127_1992762_6 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 299.0
MMD1_k127_1992762_7 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008481 263.0
MMD1_k127_1992762_8 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008654,GO:0009029,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0046401,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000004796 256.0
MMD1_k127_1992762_9 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000002306 229.0
MMD1_k127_199939_0 transporter antisigma-factor antagonist STAS K03321 - - 1.185e-214 681.0
MMD1_k127_199939_1 PFAM Hemerythrin HHE cation binding domain K09155 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 486.0
MMD1_k127_199939_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000004341 221.0
MMD1_k127_199939_3 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000006232 214.0
MMD1_k127_199939_4 Methyltransferase domain - - - 0.0000000000000000000000000000000009389 138.0
MMD1_k127_2182793_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 296.0
MMD1_k127_2182793_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000003212 159.0
MMD1_k127_2182793_2 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000000001749 156.0
MMD1_k127_2182793_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000001126 117.0
MMD1_k127_219514_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 5.019e-277 869.0
MMD1_k127_219514_1 Peptidase U62 modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 533.0
MMD1_k127_219514_10 Yip1 domain - - - 0.00000000003769 72.0
MMD1_k127_219514_11 response regulator K07714 - - 0.0003525 44.0
MMD1_k127_219514_2 Two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 423.0
MMD1_k127_219514_3 drug transmembrane transporter activity K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005743 402.0
MMD1_k127_219514_4 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000003595 258.0
MMD1_k127_219514_5 molybdenum cofactor - - - 0.000000000000000000000000000000000000000000000000000000000001295 216.0
MMD1_k127_219514_6 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000008282 234.0
MMD1_k127_219514_7 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000001077 226.0
MMD1_k127_219514_8 Pfam Response regulator receiver - - - 0.000000000000000000000000000000001083 134.0
MMD1_k127_219514_9 Methyltransferase domain K16215 - 2.1.1.243 0.00000000002908 75.0
MMD1_k127_2195772_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1181.0
MMD1_k127_2195772_1 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 621.0
MMD1_k127_2195772_10 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002848 259.0
MMD1_k127_2195772_11 myo-inosose-2 dehydratase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004827 254.0
MMD1_k127_2195772_12 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000000000001012 197.0
MMD1_k127_2195772_13 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000002789 196.0
MMD1_k127_2195772_14 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000001287 172.0
MMD1_k127_2195772_15 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000001279 164.0
MMD1_k127_2195772_16 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000232 170.0
MMD1_k127_2195772_17 Could be involved in septation K06412 - - 0.0000000000000000000000000000000006004 132.0
MMD1_k127_2195772_18 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.00000000000000000000000000000001668 135.0
MMD1_k127_2195772_19 translation release factor activity - - - 0.0000000000000000000000008886 111.0
MMD1_k127_2195772_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 479.0
MMD1_k127_2195772_20 Regulatory protein, FmdB family - - - 0.000000000000000001357 88.0
MMD1_k127_2195772_21 domain protein - - - 0.0000001946 61.0
MMD1_k127_2195772_22 - - - - 0.00003667 52.0
MMD1_k127_2195772_3 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 470.0
MMD1_k127_2195772_4 Dimerisation domain of Zinc Transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 409.0
MMD1_k127_2195772_5 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 GO:0003674,GO:0003824,GO:0004749,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008753 407.0
MMD1_k127_2195772_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 338.0
MMD1_k127_2195772_7 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009841 280.0
MMD1_k127_2195772_8 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000699 279.0
MMD1_k127_2195772_9 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000006424 264.0
MMD1_k127_2202920_0 Beta Propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 546.0
MMD1_k127_2202920_1 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006881 479.0
MMD1_k127_2202920_2 PFAM ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000328 197.0
MMD1_k127_2202920_3 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000001097 205.0
MMD1_k127_2202920_4 pfam nudix - - - 0.00000000000000000000000000000000000000000000000000009949 196.0
MMD1_k127_2212121_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007001 522.0
MMD1_k127_2212121_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 322.0
MMD1_k127_2212121_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000164 292.0
MMD1_k127_2214818_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 3.569e-272 850.0
MMD1_k127_2214818_1 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 393.0
MMD1_k127_2214818_10 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000004961 173.0
MMD1_k127_2214818_11 Domain of unknown function (DUF3786) - - - 0.0000000000000000000000000000000000002147 150.0
MMD1_k127_2214818_12 Flagellar motor protein K02557 - - 0.000000000000000000000000000000001184 145.0
MMD1_k127_2214818_13 OmpA family K02557 - - 0.00000000000000000000000000000005999 134.0
MMD1_k127_2214818_14 amine dehydrogenase activity - - - 0.00000000000000000000001849 113.0
MMD1_k127_2214818_15 Protein of unknown function (DUF1566) - - - 0.000000000000000000008323 108.0
MMD1_k127_2214818_16 FliG middle domain K02410 - - 0.0000000000000000008045 100.0
MMD1_k127_2214818_17 - - - - 0.000000000005319 68.0
MMD1_k127_2214818_2 Alpha-tubulin suppressor and related RCC1 domain-containing - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 326.0
MMD1_k127_2214818_20 domain protein - - - 0.00000007491 64.0
MMD1_k127_2214818_21 Tetratricopeptide repeat - - - 0.0000498 55.0
MMD1_k127_2214818_3 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003584 284.0
MMD1_k127_2214818_4 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003872 283.0
MMD1_k127_2214818_5 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000429 283.0
MMD1_k127_2214818_6 TIGRFAM cytochrome C family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002407 283.0
MMD1_k127_2214818_7 Cytochrome c3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003425 280.0
MMD1_k127_2214818_8 Cytochrome c3 - - - 0.0000000000000000000000000000000000000000000002385 182.0
MMD1_k127_2214818_9 PFAM MotA TolQ ExbB proton channel K02556 - - 0.0000000000000000000000000000000000000000000006612 175.0
MMD1_k127_2247265_0 denitrification pathway K15876 GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 439.0
MMD1_k127_2247265_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 379.0
MMD1_k127_2247265_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000001996 74.0
MMD1_k127_2247265_3 Cysteine rich repeat - - - 0.000000002987 63.0
MMD1_k127_224798_0 PFAM Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 524.0
MMD1_k127_224798_1 Outer membrane protein transport protein, Ompp1 FadL TodX K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000944 532.0
MMD1_k127_224798_2 response to heat K03668 - - 0.0000000000000000000000000006774 121.0
MMD1_k127_224798_3 PFAM Ion transport 2 domain protein - - - 0.00000000000000000000000003471 117.0
MMD1_k127_2250822_0 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 323.0
MMD1_k127_2250822_1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000001709 259.0
MMD1_k127_2250822_2 Electron transfer subunit of the periplasmic nitrate reductase complex NapAB K02568 - - 0.00000000000000000000000000000000000000000002768 167.0
MMD1_k127_2250822_3 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.00000000000000000000000000000002568 129.0
MMD1_k127_2250822_4 negative regulation of establishment of protein localization K02570 GO:0003674,GO:0005048,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0032879,GO:0032880,GO:0033218,GO:0042277,GO:0044424,GO:0044464,GO:0048519,GO:0050789,GO:0051049,GO:0051051,GO:0051223,GO:0051224,GO:0065007,GO:0070201,GO:0090087,GO:1904950 - 0.000000000000000000005201 95.0
MMD1_k127_225091_0 PFAM extracellular solute-binding protein, family 5 K02035,K13893 - - 1.202e-212 672.0
MMD1_k127_225091_1 PFAM aminotransferase, class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 593.0
MMD1_k127_225091_10 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 316.0
MMD1_k127_225091_11 TIGRFAM riboflavin biosynthesis protein RibF K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009477 301.0
MMD1_k127_225091_12 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003397 246.0
MMD1_k127_225091_13 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000005878 228.0
MMD1_k127_225091_14 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000001778 203.0
MMD1_k127_225091_15 methyltransferase small - - - 0.0000000000000000000000000000000000000000000000849 179.0
MMD1_k127_225091_16 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000003626 138.0
MMD1_k127_225091_17 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633,K07589 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008719,GO:0009987,GO:0016853,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0071704,GO:1901360,GO:1901564 1.13.11.81,4.1.2.25,5.1.99.7,5.1.99.8 0.00000000000000000000000000000000006663 136.0
MMD1_k127_225091_18 acetyltransferase - - - 0.000000000000000000000000000000001979 135.0
MMD1_k127_225091_19 Dihydroneopterin aldolase - - - 0.000000000000000000000000000000004461 138.0
MMD1_k127_225091_2 Phosphoglycerate kinase K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 570.0
MMD1_k127_225091_20 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000002959 100.0
MMD1_k127_225091_21 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000375 93.0
MMD1_k127_225091_22 PFAM cobalamin (vitamin B12) biosynthesis CbiX K03794,K03795 - 4.99.1.3,4.99.1.4 0.000000000000000004605 89.0
MMD1_k127_225091_23 Domain of unknown function (DUF1844) - - - 0.00000000000000005517 88.0
MMD1_k127_225091_24 - - - - 0.0000000001683 65.0
MMD1_k127_225091_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 532.0
MMD1_k127_225091_4 TIGRFAM Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 469.0
MMD1_k127_225091_5 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004604 449.0
MMD1_k127_225091_6 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 401.0
MMD1_k127_225091_7 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008521 395.0
MMD1_k127_225091_8 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 385.0
MMD1_k127_225091_9 Apoptosis-inducing factor, mitochondrion-associated, C-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 364.0
MMD1_k127_225823_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 2.604e-254 799.0
MMD1_k127_225823_1 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 335.0
MMD1_k127_225823_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 289.0
MMD1_k127_225823_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000005278 220.0
MMD1_k127_225823_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000000001008 154.0
MMD1_k127_225823_5 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000001238 138.0
MMD1_k127_225823_6 Two component signalling adaptor domain K03408 - - 0.000000000000000000001453 95.0
MMD1_k127_225823_7 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000003351 60.0
MMD1_k127_2260670_0 DNA polymerase K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 470.0
MMD1_k127_2260670_1 Catalyzes two subsequent steps in gluconeogenesis the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P) K01622 - 3.1.3.11,4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000004762 224.0
MMD1_k127_2282393_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K13039 - 4.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003481 326.0
MMD1_k127_2282393_1 Beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001114 265.0
MMD1_k127_2282393_2 Specifically catalyzes the beta-elimination of phosphate from L-phosphoserine and the beta-addition of sulfite to the dehydroalanine intermediate to produce L-cysteate K15527 - 2.5.1.76 0.0000000000000000000000000000000000000000000000000000000000000000004192 237.0
MMD1_k127_2283292_0 Nitrogenase component 1 type Oxidoreductase K02587 - - 1.567e-291 919.0
MMD1_k127_2283292_1 Nitrogenase component 1 type Oxidoreductase K02586 - 1.18.6.1 4.079e-239 745.0
MMD1_k127_2283292_10 PFAM Binding-protein-dependent transport system inner membrane component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008976 309.0
MMD1_k127_2283292_11 ABC transporter K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000005662 265.0
MMD1_k127_2283292_12 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000002025 274.0
MMD1_k127_2283292_13 RNA pseudouridylate synthase K06175 - 5.4.99.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000003653 263.0
MMD1_k127_2283292_14 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006985 253.0
MMD1_k127_2283292_15 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.0000000000000000000000000000000000000000000000000000000000000001626 237.0
MMD1_k127_2283292_16 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000000000001131 222.0
MMD1_k127_2283292_17 homocitrate synthase activity K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000001885 207.0
MMD1_k127_2283292_18 Nitrogen regulatory protein P-II K02589 - - 0.00000000000000000000000000000000000000000000000000003751 189.0
MMD1_k127_2283292_19 Nitrogen regulatory protein P-II K02590 - - 0.0000000000000000000000000000000000000000000000000001301 188.0
MMD1_k127_2283292_2 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 4.18e-225 708.0
MMD1_k127_2283292_20 Signal transduction histidine kinase, nitrogen specific, NtrB K07708,K10942 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000006037 194.0
MMD1_k127_2283292_21 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000543 177.0
MMD1_k127_2283292_22 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000007774 181.0
MMD1_k127_2283292_23 Dinitrogenase iron-molybdenum cofactor K02596 - - 0.0000000000000000000000000000000000000000001059 162.0
MMD1_k127_2283292_24 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000001092 151.0
MMD1_k127_2283292_25 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000002261 145.0
MMD1_k127_2283292_26 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000332 130.0
MMD1_k127_2283292_27 Radical SAM domain protein K02585 - - 0.0000000000000000000000000000309 125.0
MMD1_k127_2283292_3 PFAM S-adenosylmethionine synthetase (MAT) K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009331 578.0
MMD1_k127_2283292_4 Ammonium Transporter Family K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 560.0
MMD1_k127_2283292_5 Ammonium Transporter K03320 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 516.0
MMD1_k127_2283292_6 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 527.0
MMD1_k127_2283292_7 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588,K04037,K11333 - 1.18.6.1,1.3.7.14,1.3.7.15,1.3.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 476.0
MMD1_k127_2283292_8 Signal transduction histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005937 368.0
MMD1_k127_2283292_9 Elongator protein 3, MiaB family, Radical SAM K02585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 321.0
MMD1_k127_2284093_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 473.0
MMD1_k127_2284093_1 Chemotaxis sensory transducer K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 460.0
MMD1_k127_2284093_11 response regulator, receiver - - - 0.0000000000103 71.0
MMD1_k127_2284093_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004313 350.0
MMD1_k127_2284093_3 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 356.0
MMD1_k127_2284093_4 PFAM CheW domain protein K03408 - - 0.00000000000000000000000000000000000000000000000000000000007843 212.0
MMD1_k127_2284093_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000004745 205.0
MMD1_k127_2284093_6 protein conserved in bacteria K09798 - - 0.00000000000000000000000000000000000000000000000003283 190.0
MMD1_k127_2284093_7 NosL - - - 0.0000000000000000000000000000000000000000000003501 171.0
MMD1_k127_2284093_8 Nitroreductase family - - - 0.0000000000000000000000000000000000000988 150.0
MMD1_k127_2284093_9 NosL - - - 0.000000000000000000000000000000000001405 143.0
MMD1_k127_2317756_0 PFAM lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 320.0
MMD1_k127_2317756_1 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000000000000000000000000004595 189.0
MMD1_k127_2317756_2 domain protein - - - 0.000000000000001033 88.0
MMD1_k127_2317756_3 - - - - 0.00000000000006422 83.0
MMD1_k127_2317756_4 Chitobiase/beta-hexosaminidase C-terminal domain - - - 0.0000000105 67.0
MMD1_k127_2320815_0 Molecular chaperone. Has ATPase activity K04079 - - 3.338e-259 812.0
MMD1_k127_2320815_1 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 391.0
MMD1_k127_2320815_2 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000001347 190.0
MMD1_k127_2320815_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000072 68.0
MMD1_k127_2320815_4 DsrE/DsrF-like family - - - 0.0000001691 59.0
MMD1_k127_2320815_5 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00005163 52.0
MMD1_k127_2330565_0 FAD binding domain K00394 - 1.8.99.2 6.023e-228 711.0
MMD1_k127_2330565_1 Belongs to the sulfate adenylyltransferase family K00958,K13811 - 2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 579.0
MMD1_k127_2330565_10 protein containing a von Willebrand factor type A (vWA) domain - - - 0.0000000000000000000000000001555 134.0
MMD1_k127_2330565_11 PFAM Forkhead-associated protein - - - 0.00000000000000000000000005368 113.0
MMD1_k127_2330565_12 - - - - 0.000000000003525 79.0
MMD1_k127_2330565_13 STAS domain K06378 - - 0.0000000008368 65.0
MMD1_k127_2330565_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 320.0
MMD1_k127_2330565_3 PFAM von Willebrand factor type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008202 319.0
MMD1_k127_2330565_4 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 304.0
MMD1_k127_2330565_5 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000002352 240.0
MMD1_k127_2330565_6 Serine threonine protein kinase K08884 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000005673 250.0
MMD1_k127_2330565_7 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000299 233.0
MMD1_k127_2330565_8 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000006808 184.0
MMD1_k127_2330565_9 HD domain - - - 0.00000000000000000000000000000000000000000000003136 186.0
MMD1_k127_2341770_0 PFAM Carbamoyl-phosphate synthase L chain ATP-binding K01955 - 6.3.5.5 0.0 1539.0
MMD1_k127_2341770_1 Phosphoglycerate kinase K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007959 599.0
MMD1_k127_2341770_10 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 398.0
MMD1_k127_2341770_11 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 395.0
MMD1_k127_2341770_12 radical SAM domain protein K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 355.0
MMD1_k127_2341770_13 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 351.0
MMD1_k127_2341770_14 Histidine kinase HAMP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 357.0
MMD1_k127_2341770_15 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001479 253.0
MMD1_k127_2341770_16 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000006668 226.0
MMD1_k127_2341770_17 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( K02823 - - 0.00000000000000000000000000000000000000000000000000001055 199.0
MMD1_k127_2341770_18 Putative transmembrane protein (Alph_Pro_TM) - - - 0.00000000000000000000000000000000000000000000001793 186.0
MMD1_k127_2341770_19 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000002963 182.0
MMD1_k127_2341770_2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 593.0
MMD1_k127_2341770_20 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000002977 160.0
MMD1_k127_2341770_21 acid phosphatase activity - - - 0.00000000000000000000000000000000000000000186 167.0
MMD1_k127_2341770_22 Beta-lactamase K17836 - 3.5.2.6 0.000000000000000000000000000000000000001152 160.0
MMD1_k127_2341770_23 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000002568 130.0
MMD1_k127_2341770_24 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000000000000002232 124.0
MMD1_k127_2341770_25 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000001703 69.0
MMD1_k127_2341770_27 PFAM UspA domain protein - - - 0.00000002821 61.0
MMD1_k127_2341770_3 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004703 546.0
MMD1_k127_2341770_4 TIGRFAM carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005376 535.0
MMD1_k127_2341770_5 Domains REC, sigma54 interaction, HTH8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005401 452.0
MMD1_k127_2341770_6 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 425.0
MMD1_k127_2341770_7 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 409.0
MMD1_k127_2341770_8 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 416.0
MMD1_k127_2341770_9 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 400.0
MMD1_k127_2351291_0 PFAM peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0 1014.0
MMD1_k127_2351291_1 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000009265 163.0
MMD1_k127_2351291_2 Universal stress protein family - - - 0.0000000000000000000000000002226 120.0
MMD1_k127_2352100_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K05922,K06281 - 1.12.2.1,1.12.5.1,1.12.99.6 1.677e-232 728.0
MMD1_k127_2352100_1 Telomere recombination K04656 - - 1.245e-231 746.0
MMD1_k127_2352100_10 carbon dioxide binding K04653,K04654 - - 0.0001997 51.0
MMD1_k127_2352100_2 Hydrogenase formation hypA family K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 422.0
MMD1_k127_2352100_3 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 371.0
MMD1_k127_2352100_4 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 305.0
MMD1_k127_2352100_5 Na dependent nucleoside transporter K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001548 283.0
MMD1_k127_2352100_6 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001086 261.0
MMD1_k127_2352100_7 Hydrogenase maturation protease K03605 - - 0.0000000000000000000000000000000000000000009693 163.0
MMD1_k127_2352100_8 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K05922,K06281 - 1.12.2.1,1.12.5.1,1.12.99.6 0.00000000000000000000000000002816 117.0
MMD1_k127_2352100_9 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000004197 100.0
MMD1_k127_2353969_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 8.211e-208 652.0
MMD1_k127_2353969_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 480.0
MMD1_k127_2353969_2 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000001942 95.0
MMD1_k127_2356579_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009509 545.0
MMD1_k127_2356579_1 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 466.0
MMD1_k127_2356579_11 PFAM Rubrerythrin - - - 0.00000000000000001001 90.0
MMD1_k127_2356579_12 Dihydroneopterin aldolase - - - 0.000009944 49.0
MMD1_k127_2356579_2 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 473.0
MMD1_k127_2356579_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000003786 263.0
MMD1_k127_2356579_4 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000001423 249.0
MMD1_k127_2356579_5 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000000000000000000001628 229.0
MMD1_k127_2356579_6 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000009038 206.0
MMD1_k127_2356579_7 cheY-homologous receiver domain - - - 0.000000000000000000000000000000271 130.0
MMD1_k127_2356579_8 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000001654 105.0
MMD1_k127_2356579_9 Protein of unknown function (DUF721) - - - 0.00000000000000000004804 96.0
MMD1_k127_2361737_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 577.0
MMD1_k127_2361737_1 DNA polymerase III, delta subunit, C terminal K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000003029 211.0
MMD1_k127_2361737_2 PFAM PSP1 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000474 213.0
MMD1_k127_2361737_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000001946 57.0
MMD1_k127_2389372_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 539.0
MMD1_k127_2389372_1 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 370.0
MMD1_k127_2389372_2 Belongs to the ABC transporter superfamily K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000682 301.0
MMD1_k127_2389372_3 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001829 278.0
MMD1_k127_2389372_4 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002943 277.0
MMD1_k127_2389372_5 PFAM Rhodanese domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005205 265.0
MMD1_k127_2389372_6 thiosulfate sulfurtransferase activity - - - 0.00000000000000000000000000000000000000000000001919 179.0
MMD1_k127_2389372_7 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000002512 133.0
MMD1_k127_2389372_8 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000003296 127.0
MMD1_k127_2389372_9 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.00000000000000001105 84.0
MMD1_k127_239641_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 463.0
MMD1_k127_239641_1 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 288.0
MMD1_k127_239641_2 TIGRFAM NADH-quinone oxidoreductase, E subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000006515 143.0
MMD1_k127_239641_3 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000002404 97.0
MMD1_k127_2396872_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 393.0
MMD1_k127_2396872_1 Acyl-CoA synthetase (NDP forming) K01905,K18594,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000001952 192.0
MMD1_k127_2396872_2 SMART Tetratricopeptide domain protein - - - 0.0003987 44.0
MMD1_k127_2401829_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 1.026e-197 627.0
MMD1_k127_2401829_1 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001528 272.0
MMD1_k127_2401829_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000006052 255.0
MMD1_k127_2401829_3 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000001407 239.0
MMD1_k127_2401829_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000001891 121.0
MMD1_k127_2405760_0 Nitrate reductase alpha subunit K17050 - - 1.827e-229 742.0
MMD1_k127_2405760_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007758 344.0
MMD1_k127_2405760_10 Transcriptional regulator K02019,K05772 - - 0.0000000000000000000000001462 110.0
MMD1_k127_2405760_11 Nitrate reductase delta subunit - - - 0.00000000000000000000006863 108.0
MMD1_k127_2405760_12 Diguanylate cyclase - - - 0.000000000000000000004512 109.0
MMD1_k127_2405760_13 GAF domain - - - 0.0000000000000001814 94.0
MMD1_k127_2405760_14 nitrate reductase molybdenum cofactor assembly chaperone K17052 - - 0.000000000001493 78.0
MMD1_k127_2405760_15 helix_turn_helix, Lux Regulon - - - 0.000000002249 68.0
MMD1_k127_2405760_16 diguanylate cyclase K21022 - 2.7.7.65 0.00004439 54.0
MMD1_k127_2405760_2 4Fe-4S dicluster domain K00371,K17051 - 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007178 342.0
MMD1_k127_2405760_3 Probable molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 316.0
MMD1_k127_2405760_4 Histidine kinase K07675 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009837 317.0
MMD1_k127_2405760_5 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006391 279.0
MMD1_k127_2405760_6 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000006985 253.0
MMD1_k127_2405760_7 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003375 246.0
MMD1_k127_2405760_8 NosL - - - 0.0000000000000000000000000000000000000000000000003224 182.0
MMD1_k127_2405760_9 Type II secretory pathway, pseudopilin - - - 0.0000000000000000000000000000000001741 138.0
MMD1_k127_2408046_0 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 586.0
MMD1_k127_2408046_1 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 441.0
MMD1_k127_2408046_2 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 337.0
MMD1_k127_2408046_3 transcriptional regulatory protein - - - 0.00000000000000000000000000000000000001725 147.0
MMD1_k127_2409342_0 Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein) K03620,K08354 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006281 265.0
MMD1_k127_2409342_1 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000002361 178.0
MMD1_k127_2409342_2 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000000007308 107.0
MMD1_k127_2409342_3 - - - - 0.00000004473 61.0
MMD1_k127_2409342_4 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000001998 56.0
MMD1_k127_2418158_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1087.0
MMD1_k127_2418158_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 6.887e-260 813.0
MMD1_k127_2418158_10 Transcriptional regulator K11921,K19338 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 328.0
MMD1_k127_2418158_11 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 321.0
MMD1_k127_2418158_12 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 313.0
MMD1_k127_2418158_13 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 289.0
MMD1_k127_2418158_14 Belongs to the pseudouridine synthase RsuA family K06178,K06181,K06182 - 5.4.99.20,5.4.99.21,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 299.0
MMD1_k127_2418158_15 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000002 239.0
MMD1_k127_2418158_16 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000001794 198.0
MMD1_k127_2418158_17 Glycoprotease family K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.00000000000000000000000000000000000000000000000019 184.0
MMD1_k127_2418158_18 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000007754 187.0
MMD1_k127_2418158_19 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000001527 170.0
MMD1_k127_2418158_2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 6.208e-230 721.0
MMD1_k127_2418158_20 YbbR-like protein - - - 0.00000000000000000000000000000000000001087 153.0
MMD1_k127_2418158_21 PFAM acylphosphatase K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000000000000002241 128.0
MMD1_k127_2418158_22 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.00000000000000000000000005274 114.0
MMD1_k127_2418158_23 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.0000000000000000000000114 106.0
MMD1_k127_2418158_24 phosphorelay signal transduction system - - - 0.00000000000000000000001991 111.0
MMD1_k127_2418158_25 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.0000000000000000005464 100.0
MMD1_k127_2418158_26 Domain of unknown function (DUF4253) - - - 0.00000000000000004171 91.0
MMD1_k127_2418158_27 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000307 76.0
MMD1_k127_2418158_28 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000272 78.0
MMD1_k127_2418158_29 - - - - 0.00000000008668 66.0
MMD1_k127_2418158_3 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 2.09e-227 713.0
MMD1_k127_2418158_30 - - - - 0.000000000153 69.0
MMD1_k127_2418158_31 Predicted RNA-binding protein - - - 0.00000001712 57.0
MMD1_k127_2418158_33 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.0001846 44.0
MMD1_k127_2418158_4 Haem-binding uptake, Tiki superfamily, ChaN - - - 8.322e-214 701.0
MMD1_k127_2418158_5 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.394e-202 645.0
MMD1_k127_2418158_6 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 1.416e-198 632.0
MMD1_k127_2418158_7 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008866 471.0
MMD1_k127_2418158_8 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 427.0
MMD1_k127_2418158_9 Metallo-beta-lactamase superfamily K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 384.0
MMD1_k127_2420539_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 5.525e-204 650.0
MMD1_k127_2420539_1 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005963 385.0
MMD1_k127_2420539_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 295.0
MMD1_k127_2420539_3 Evidence 4 Homologs of previously reported genes of K02016 - - 0.000000000000000000000000000000000000000000000117 171.0
MMD1_k127_2420539_4 tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000001882 166.0
MMD1_k127_2420539_5 (AIR) carboxylase K06898 - - 0.0000000000000000000000000000000000000002159 151.0
MMD1_k127_2420539_6 GIY-YIG catalytic domain K07461 - - 0.0000000000000000000000000000000006967 134.0
MMD1_k127_2420539_7 RNA pseudouridylate synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.0000000000000000002164 89.0
MMD1_k127_2424480_0 Methyl-viologen-reducing hydrogenase, delta subunit K03388,K16885,K16886 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 1.216e-313 975.0
MMD1_k127_2424480_1 FAD dependent oxidoreductase K16885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 538.0
MMD1_k127_2424480_2 FAD binding domain K00394 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000000005469 230.0
MMD1_k127_2424480_3 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000007608 166.0
MMD1_k127_243271_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1125.0
MMD1_k127_243271_1 TPR repeat - - - 2.989e-296 934.0
MMD1_k127_243271_10 PFAM Extracellular ligand-binding receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 334.0
MMD1_k127_243271_11 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339 321.0
MMD1_k127_243271_12 pfam abc1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 326.0
MMD1_k127_243271_13 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 316.0
MMD1_k127_243271_14 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 294.0
MMD1_k127_243271_15 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 314.0
MMD1_k127_243271_16 Protein of unknown function DUF116 K09729 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005868 271.0
MMD1_k127_243271_17 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000005223 267.0
MMD1_k127_243271_18 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004478 261.0
MMD1_k127_243271_19 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000023 273.0
MMD1_k127_243271_2 Cache domain - - - 5.323e-256 801.0
MMD1_k127_243271_20 - K07112 - - 0.00000000000000000000000000000000000000000000000000000000000001526 220.0
MMD1_k127_243271_21 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000004287 231.0
MMD1_k127_243271_22 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000006722 222.0
MMD1_k127_243271_23 polysaccharide deacetylase K11931,K21478 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016787,GO:0016810,GO:0043170,GO:0043412,GO:0071704,GO:0098732 - 0.00000000000000000000000000000000000000000000000000000000000583 223.0
MMD1_k127_243271_24 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000000000000000000000000000000000000000000000008857 203.0
MMD1_k127_243271_25 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000000000003281 195.0
MMD1_k127_243271_26 Polypeptide deformylase K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000513 189.0
MMD1_k127_243271_27 Amidohydrolase family - - - 0.00000000000000000000000000000000000000007599 162.0
MMD1_k127_243271_28 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K00406,K01011,K07112 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000006553 123.0
MMD1_k127_243271_29 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000005024 114.0
MMD1_k127_243271_3 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 3.114e-239 746.0
MMD1_k127_243271_30 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000005997 111.0
MMD1_k127_243271_31 CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000000000008977 111.0
MMD1_k127_243271_32 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000009404 106.0
MMD1_k127_243271_33 PFAM PASTA domain - - - 0.00000000000000000002538 100.0
MMD1_k127_243271_34 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000007083 89.0
MMD1_k127_243271_35 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K00406,K01011,K07112 - 2.8.1.1,2.8.1.2 0.000000000000001327 79.0
MMD1_k127_243271_36 Sporulation and spore germination - - - 0.0000000000004144 78.0
MMD1_k127_243271_37 integral membrane protein - - - 0.00000000007034 70.0
MMD1_k127_243271_38 TIGRFAM cytochrome C family protein - - - 0.000000000549 65.0
MMD1_k127_243271_39 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000000002251 59.0
MMD1_k127_243271_4 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 556.0
MMD1_k127_243271_40 N-Acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000002242 58.0
MMD1_k127_243271_5 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 429.0
MMD1_k127_243271_6 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008555 382.0
MMD1_k127_243271_7 Calcineurin-like phosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008751 355.0
MMD1_k127_243271_8 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 357.0
MMD1_k127_243271_9 Mur ligase, middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006694 350.0
MMD1_k127_2434840_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0 1732.0
MMD1_k127_2434840_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 8.067e-217 683.0
MMD1_k127_2434840_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 302.0
MMD1_k127_2434840_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 297.0
MMD1_k127_2434840_12 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001791 276.0
MMD1_k127_2434840_13 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000018 258.0
MMD1_k127_2434840_14 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003407 264.0
MMD1_k127_2434840_15 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008688 255.0
MMD1_k127_2434840_16 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000121 240.0
MMD1_k127_2434840_17 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000000002621 235.0
MMD1_k127_2434840_18 Cobalt transport protein K02008 - - 0.000000000000000000000000000000000000000000000000000000000000000001865 236.0
MMD1_k127_2434840_19 PFAM CheW domain protein K03408 - - 0.0000000000000000000000000000000000000000000000000000000006416 204.0
MMD1_k127_2434840_2 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 584.0
MMD1_k127_2434840_20 TIGRFAM 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000001127 206.0
MMD1_k127_2434840_21 nickel-responsive regulator K07722 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000207 197.0
MMD1_k127_2434840_22 zinc-ribbon domain - - - 0.00000000000000000000000000000000000000000000000000001394 203.0
MMD1_k127_2434840_23 PFAM formylmethanofuran dehydrogenase, subunit E region K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000004636 193.0
MMD1_k127_2434840_24 - - - - 0.0000000000000000000000000000000000000000000000000003862 193.0
MMD1_k127_2434840_25 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000003495 167.0
MMD1_k127_2434840_26 PFAM outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000000000005078 174.0
MMD1_k127_2434840_27 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000212 131.0
MMD1_k127_2434840_28 - - - - 0.0000000000000000000000000000002768 131.0
MMD1_k127_2434840_29 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000009021 125.0
MMD1_k127_2434840_3 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 568.0
MMD1_k127_2434840_30 - - - - 0.00000000000000000001385 99.0
MMD1_k127_2434840_32 lyase activity - - - 0.000000007971 69.0
MMD1_k127_2434840_33 - - - - 0.0000000194 59.0
MMD1_k127_2434840_4 B3/4 domain K01890 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 554.0
MMD1_k127_2434840_5 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004031 539.0
MMD1_k127_2434840_6 PFAM cobalamin (vitamin B12) biosynthesis CbiM K02007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 368.0
MMD1_k127_2434840_7 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 362.0
MMD1_k127_2434840_8 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006,K16787 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 325.0
MMD1_k127_2434840_9 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 301.0
MMD1_k127_2445534_0 4 iron, 4 sulfur cluster binding K07139 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464,GO:0048037,GO:0051536,GO:0051539,GO:0051540 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 410.0
MMD1_k127_2445534_1 DNA polymerase alpha chain like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006704 268.0
MMD1_k127_2481137_0 Metalloenzyme superfamily K15635 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 514.0
MMD1_k127_2481137_1 ThiF family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001973 232.0
MMD1_k127_2481137_2 TIGRFAM MoaD family protein K03636 - - 0.00000000000000000000000000001439 121.0
MMD1_k127_2481137_3 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000008672 114.0
MMD1_k127_2481137_4 PFAM Mov34 MPN PAD-1 family protein K21140 - 3.13.1.6 0.000000000000000000000006818 106.0
MMD1_k127_2481137_5 NIL - - - 0.0000000000000000000003512 100.0
MMD1_k127_2511076_0 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004432 572.0
MMD1_k127_2511076_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006687 453.0
MMD1_k127_2511076_2 Curli production assembly/transport component CsgG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 361.0
MMD1_k127_2511076_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 332.0
MMD1_k127_2511076_4 Alpha/beta hydrolase family K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007749 283.0
MMD1_k127_2511076_5 Protein of unknown function (DUF3015) - - - 0.0000000000000000000000000000000000000000000000000002515 193.0
MMD1_k127_2511076_6 Protein of unknown function (DUF3015) - - - 0.000000000000000000000000000000000000000002782 161.0
MMD1_k127_2511076_7 Haemolytic - - - 0.0000000000000000000000000000000000000127 150.0
MMD1_k127_2511076_8 PEGA domain - - - 0.00008576 51.0
MMD1_k127_2534069_0 Pyridoxal-phosphate dependent enzyme K12339,K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113,2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 342.0
MMD1_k127_2534069_1 Nitrite sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein K00335,K00390,K18853 - 1.5.99.15,1.6.5.3,1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000004801 272.0
MMD1_k127_2534069_3 proteolysis K21140,K21147 - 2.7.7.80,2.8.1.11,3.13.1.6 0.000000000000000000000000001352 117.0
MMD1_k127_2534069_4 redox protein regulator of disulfide bond formation K04085 - - 0.000000000000000007053 95.0
MMD1_k127_2583596_0 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 464.0
MMD1_k127_2583596_1 AAA domain, putative AbiEii toxin, Type IV TA system K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 317.0
MMD1_k127_2583596_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000002514 224.0
MMD1_k127_258918_0 Hydrophobe Amphiphile Efflux-1 (HAE1) Family K03296,K18138 - - 0.0 1572.0
MMD1_k127_258918_1 Belongs to the glycosyl hydrolase 13 family - - - 0.0 1020.0
MMD1_k127_258918_10 - - - - 0.00000000000000000000000000000000000000002626 164.0
MMD1_k127_258918_11 protein conserved in bacteria K09778 - - 0.0000000000000000000000000000000000001141 150.0
MMD1_k127_258918_12 GIY-YIG catalytic domain - - - 0.0000000000000000000000000000000000003387 143.0
MMD1_k127_258918_13 - - - - 0.0000000000000000000000472 104.0
MMD1_k127_258918_14 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000002759 112.0
MMD1_k127_258918_15 - - - - 0.000001271 57.0
MMD1_k127_258918_2 Surface antigen K07001 - - 3.933e-261 828.0
MMD1_k127_258918_3 Alpha amylase, catalytic domain - - - 1.056e-215 676.0
MMD1_k127_258918_4 Sodium/calcium exchanger protein K07300 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 530.0
MMD1_k127_258918_5 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007631 512.0
MMD1_k127_258918_6 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 441.0
MMD1_k127_258918_7 Biotin-lipoyl like K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005103 406.0
MMD1_k127_258918_8 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000004096 260.0
MMD1_k127_258918_9 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000007616 226.0
MMD1_k127_2614387_0 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001007 235.0
MMD1_k127_2614387_1 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000001656 204.0
MMD1_k127_2614387_2 YHS domain protein - - - 0.0000000000000000000000000000000000000000000000000001304 189.0
MMD1_k127_2614387_3 Protein of unknown function (DUF1722) - - - 0.000000000000000001643 85.0
MMD1_k127_2614387_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000001793 59.0
MMD1_k127_2622637_0 Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 585.0
MMD1_k127_2622637_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 389.0
MMD1_k127_2622637_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 338.0
MMD1_k127_2622637_3 fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 314.0
MMD1_k127_2622637_4 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000653 184.0
MMD1_k127_2633599_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 2.279e-225 711.0
MMD1_k127_2633599_1 General secretory system II, protein E domain protein K02454 - - 8.595e-218 692.0
MMD1_k127_2633599_10 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K01008,K04487 - 2.7.9.3,2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 404.0
MMD1_k127_2633599_11 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007618 354.0
MMD1_k127_2633599_12 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 353.0
MMD1_k127_2633599_13 pfam abc K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 310.0
MMD1_k127_2633599_14 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 300.0
MMD1_k127_2633599_15 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002454 276.0
MMD1_k127_2633599_16 CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001511 254.0
MMD1_k127_2633599_17 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000007831 235.0
MMD1_k127_2633599_18 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.0000000000000000000000000000000000000000000000000001485 195.0
MMD1_k127_2633599_19 dTDP biosynthetic process K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000003549 190.0
MMD1_k127_2633599_2 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 6.38e-199 643.0
MMD1_k127_2633599_20 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000000000000000000000000000000000000186 188.0
MMD1_k127_2633599_21 Cell surface protein - - - 0.00000000000000000003721 106.0
MMD1_k127_2633599_22 PFAM 4Fe-4S K00176 - 1.2.7.3 0.000000000000000136 81.0
MMD1_k127_2633599_23 Evidence 5 No homology to any previously reported sequences - - - 0.00000002348 63.0
MMD1_k127_2633599_24 Tetratricopeptide repeat protein - - - 0.0001376 51.0
MMD1_k127_2633599_3 Bacterial regulatory protein, Fis family K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 535.0
MMD1_k127_2633599_4 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745 502.0
MMD1_k127_2633599_5 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009968 457.0
MMD1_k127_2633599_6 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006861 458.0
MMD1_k127_2633599_7 PFAM bifunctional deaminase-reductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 432.0
MMD1_k127_2633599_8 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 424.0
MMD1_k127_2633599_9 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005442 406.0
MMD1_k127_2654061_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 1.773e-246 767.0
MMD1_k127_2654061_1 Belongs to the RtcB family K14415 - 6.5.1.3 6.356e-212 667.0
MMD1_k127_2654061_10 Belongs to the heme-copper respiratory oxidase family K04561 - 1.7.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 412.0
MMD1_k127_2654061_11 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 401.0
MMD1_k127_2654061_12 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 379.0
MMD1_k127_2654061_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 341.0
MMD1_k127_2654061_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000808 314.0
MMD1_k127_2654061_15 Family 5 K02035,K15580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 316.0
MMD1_k127_2654061_16 HlyD family secretion protein K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008595 302.0
MMD1_k127_2654061_17 PFAM Cytochrome b5 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 299.0
MMD1_k127_2654061_18 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 289.0
MMD1_k127_2654061_19 PFAM cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005404 260.0
MMD1_k127_2654061_2 PFAM Cytochrome c oxidase, subunit I K04561 - 1.7.2.5 4.643e-197 622.0
MMD1_k127_2654061_20 dUTP biosynthetic process K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000001431 256.0
MMD1_k127_2654061_21 PFAM HPP family K07168 - - 0.00000000000000000000000000000000000000000000000000000000000000000001222 237.0
MMD1_k127_2654061_22 Phage integrase, N-terminal SAM-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000007062 235.0
MMD1_k127_2654061_23 cytochrome c K02305 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000002929 231.0
MMD1_k127_2654061_24 NapC/NirT cytochrome c family, N-terminal region K15876 - - 0.000000000000000000000000000000000000000000000000000000000000005543 222.0
MMD1_k127_2654061_25 - - - - 0.0000000000000000000000000000000000000000000000000000000000001713 220.0
MMD1_k127_2654061_26 thiolester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000203 202.0
MMD1_k127_2654061_27 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000002941 190.0
MMD1_k127_2654061_28 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.00000000000000000000000000000000000000000000001696 172.0
MMD1_k127_2654061_29 Peptidase C26 K07010 - - 0.00000000000000000000000000000000000000000000004668 178.0
MMD1_k127_2654061_3 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000787 506.0
MMD1_k127_2654061_30 RNA signal recognition particle 4.5S RNA - - - 0.0000000000000000000000000000000000000000001742 162.0
MMD1_k127_2654061_31 PFAM Plasmid maintenance system killer K07334 - - 0.000000000000000000000000000000000000003382 147.0
MMD1_k127_2654061_32 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000005008 150.0
MMD1_k127_2654061_33 - - - - 0.000000000000000000000000000000000001405 143.0
MMD1_k127_2654061_34 cytochrome c K02305 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000002653 143.0
MMD1_k127_2654061_35 4Fe-4S binding domain - - - 0.0000000000000000000000000000000101 139.0
MMD1_k127_2654061_36 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000000000000000221 131.0
MMD1_k127_2654061_37 hydrolases or acyltransferases alpha beta hydrolase superfamily - - - 0.000000000000000000000000001072 123.0
MMD1_k127_2654061_38 PFAM CBS domain - - - 0.000000000000000000000000001472 121.0
MMD1_k127_2654061_39 Divergent 4Fe-4S mono-cluster K05337 - - 0.0000000000000000000001092 98.0
MMD1_k127_2654061_4 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 497.0
MMD1_k127_2654061_40 Thioredoxin domain - - - 0.000000000000000000003481 104.0
MMD1_k127_2654061_41 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000002966 94.0
MMD1_k127_2654061_42 Cytochrome c7 and related cytochrome c - - - 0.00000000000000002409 86.0
MMD1_k127_2654061_43 - - - - 0.0000000000000001112 85.0
MMD1_k127_2654061_44 Cupin domain - - - 0.000000000000001413 80.0
MMD1_k127_2654061_45 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.00000000000000927 76.0
MMD1_k127_2654061_46 Cytochrome c7 and related cytochrome c - - - 0.00000000004796 67.0
MMD1_k127_2654061_47 Belongs to the 'phage' integrase family K04763 - - 0.00000001937 59.0
MMD1_k127_2654061_5 PFAM Radical SAM K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006109 451.0
MMD1_k127_2654061_6 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006389 448.0
MMD1_k127_2654061_7 PFAM ABC transporter K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 437.0
MMD1_k127_2654061_8 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 443.0
MMD1_k127_2654061_9 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 421.0
MMD1_k127_2661357_0 His Kinase A (phospho-acceptor) domain - - - 0.0 1029.0
MMD1_k127_2661357_1 Pyridoxal-phosphate dependent enzyme K06001 - 4.2.1.20 4.896e-210 662.0
MMD1_k127_2661357_10 PFAM Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000001005 148.0
MMD1_k127_2661357_11 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000005515 159.0
MMD1_k127_2661357_12 Transcriptional - - - 0.0000000000000000000000000000000005553 134.0
MMD1_k127_2661357_13 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000004243 128.0
MMD1_k127_2661357_14 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000000000000002946 109.0
MMD1_k127_2661357_15 TonB-dependent receptor K02014,K02456,K02457,K02458,K10926,K10930,K10931 GO:0003674,GO:0005198,GO:0005575,GO:0005623,GO:0008150,GO:0009289,GO:0009405,GO:0009987,GO:0016043,GO:0030030,GO:0042995,GO:0044419,GO:0044464,GO:0051704,GO:0071840 - 0.00000000000000000009316 106.0
MMD1_k127_2661357_16 ABC-2 family transporter protein K01992 - - 0.00000000000000004661 94.0
MMD1_k127_2661357_18 Stringent starvation protein B K09985 - - 0.000000000001389 76.0
MMD1_k127_2661357_2 Domain in cystathionine beta-synthase and other proteins. K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 527.0
MMD1_k127_2661357_20 - - - - 0.0000006047 52.0
MMD1_k127_2661357_3 DNA polymerase III K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004929 487.0
MMD1_k127_2661357_4 PFAM ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 359.0
MMD1_k127_2661357_5 endonuclease III K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 289.0
MMD1_k127_2661357_6 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000001494 189.0
MMD1_k127_2661357_7 radical SAM K06871 - - 0.0000000000000000000000000000000000000000000000000006066 198.0
MMD1_k127_2661357_8 Cyclic nucleotide-monophosphate binding domain K10914 - - 0.0000000000000000000000000000000000000000000009166 179.0
MMD1_k127_2661357_9 response regulator receiver - - - 0.0000000000000000000000000000000000000000004491 161.0
MMD1_k127_2671061_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 1.616e-230 723.0
MMD1_k127_2671061_1 ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002085 283.0
MMD1_k127_2671061_2 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004982 288.0
MMD1_k127_2671061_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002473 268.0
MMD1_k127_2671061_4 ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001095 253.0
MMD1_k127_2671061_5 PFAM Branched-chain amino acid transport system permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005627 254.0
MMD1_k127_2671061_6 Secreted repeat of unknown function - - - 0.0000000000000000000000000000000000000000000131 166.0
MMD1_k127_2671061_7 cellulase activity - - - 0.0000000000006343 79.0
MMD1_k127_2707623_0 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 447.0
MMD1_k127_2707623_1 type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 464.0
MMD1_k127_2707623_10 PFAM Fimbrial assembly family protein K02663 - - 0.000001078 59.0
MMD1_k127_2707623_2 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000003329 212.0
MMD1_k127_2707623_3 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000007818 175.0
MMD1_k127_2707623_4 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000002477 165.0
MMD1_k127_2707623_5 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000000000007059 150.0
MMD1_k127_2707623_6 type II secretion system protein G K02456 - - 0.000000000000000000000000000000000004162 141.0
MMD1_k127_2707623_7 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000005169 130.0
MMD1_k127_2707623_8 Pilus assembly protein K02662 - - 0.000000000000001488 88.0
MMD1_k127_2707623_9 Pilus assembly protein, PilO K02664 - - 0.00000000001533 72.0
MMD1_k127_271341_0 isopentenyl-diphosphate delta-isomerase activity - - - 0.000000000000000000000000000003363 128.0
MMD1_k127_271341_1 metalloendopeptidase activity K03799 - - 0.00000000000000000000000292 114.0
MMD1_k127_2725818_0 Outer membrane lipoprotein Slp family K07285 - - 0.000000000000000000000000000009848 126.0
MMD1_k127_2725818_1 Outer membrane lipoprotein Slp family K07285 - - 0.00000000000000000000000000005071 123.0
MMD1_k127_2725818_2 Outer membrane lipoprotein Slp family K07285 - - 0.00000000000000000000000006362 118.0
MMD1_k127_276363_0 Transketolase, central region K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824 406.0
MMD1_k127_276363_1 Dehydrogenase E1 component K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 359.0
MMD1_k127_276363_2 - - - - 0.0000000000000000000001156 106.0
MMD1_k127_276363_3 PFAM ABC transporter K09812 - - 0.0000000000000000001325 90.0
MMD1_k127_2769997_0 PAS domain K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000383 515.0
MMD1_k127_2769997_1 Caspase domain - - - 0.000000000000000000000000000000000007356 145.0
MMD1_k127_2769997_2 Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine 7-oxoG) from DNA. Also nicks DNA at apurinic apyrimidinic sites (AP sites) K03653 - 4.2.99.18 0.00000000000000000000000000000000001593 143.0
MMD1_k127_2769997_3 S23 ribosomal protein - - - 0.00000000000000000000000000000001936 130.0
MMD1_k127_2769997_4 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000016 132.0
MMD1_k127_2769997_5 Rhodanese Homology Domain - - - 0.0000000000000000001398 94.0
MMD1_k127_2769997_6 Tetratricopeptide repeat - - - 0.000002014 57.0
MMD1_k127_2771191_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 5.697e-280 877.0
MMD1_k127_2771191_1 Utp--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009637 387.0
MMD1_k127_2771191_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 355.0
MMD1_k127_2771191_3 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008864 317.0
MMD1_k127_2771191_4 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 308.0
MMD1_k127_2771191_5 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002091 273.0
MMD1_k127_2804053_0 (belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family) K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 547.0
MMD1_k127_2804053_1 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003619 288.0
MMD1_k127_2804053_2 PFAM ResB family protein K07399 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009398 290.0
MMD1_k127_2804053_3 O-acyltransferase activity - - - 0.00000000000000000000000000052 118.0
MMD1_k127_2804053_4 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000002379 98.0
MMD1_k127_2804053_5 small metal-binding protein - - - 0.00000007626 59.0
MMD1_k127_2810098_0 Belongs to the PEP-utilizing enzyme family K01006,K22424 - 2.7.3.13,2.7.9.1 1.739e-270 848.0
MMD1_k127_2810098_1 Glycosyl hydrolase family 57 - - - 5.95e-215 689.0
MMD1_k127_2810098_2 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 622.0
MMD1_k127_2810098_3 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 483.0
MMD1_k127_2810098_4 nucleotidyltransferase activity K07075 - - 0.00000000000000000000000000000000000000000000002252 176.0
MMD1_k127_2810098_5 Rhodanese Homology Domain - - - 0.0000000000000000000000000000006364 128.0
MMD1_k127_2810098_6 cell cycle K05589,K12065,K13052 - - 0.00000006541 59.0
MMD1_k127_2814214_0 Peptidase family M23 K21471 GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000002252 233.0
MMD1_k127_2814214_1 ABC transporter K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000041 222.0
MMD1_k127_2814214_2 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000008343 196.0
MMD1_k127_2864644_0 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 345.0
MMD1_k127_2864644_2 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000001043 238.0
MMD1_k127_2864644_3 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.0000000001544 71.0
MMD1_k127_2869552_0 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000063 294.0
MMD1_k127_2869552_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000003284 209.0
MMD1_k127_2869552_2 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000002057 160.0
MMD1_k127_2869552_3 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000003809 128.0
MMD1_k127_2878899_0 Cytochrome b/b6/petB K00412,K03888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 473.0
MMD1_k127_2878899_1 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.0000000000000000000000000000000000000009779 152.0
MMD1_k127_2936225_0 isocitrate dehydrogenase activity K00031 GO:0000287,GO:0003674,GO:0003824,GO:0004448,GO:0004450,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006102,GO:0008150,GO:0008152,GO:0008270,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044464,GO:0045333,GO:0046487,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0071944,GO:0072350 1.1.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 572.0
MMD1_k127_2936225_1 two-component system, chemotaxis family, sensor kinase CheA with response regulator domain K02487,K06596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004941 476.0
MMD1_k127_2936225_10 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins - - - 0.00000000000000000000000004322 119.0
MMD1_k127_2936225_11 chemotaxis K03408 - - 0.00000000000000001591 89.0
MMD1_k127_2936225_12 Chemotaxis protein cheW K03408 - - 0.0000001142 59.0
MMD1_k127_2936225_13 Two component signalling adaptor domain K03408 - - 0.000001373 57.0
MMD1_k127_2936225_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K02660,K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 375.0
MMD1_k127_2936225_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004634 244.0
MMD1_k127_2936225_4 response regulator K02658 - - 0.00000000000000000000000000000000000000000000000000000004601 213.0
MMD1_k127_2936225_5 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.00000000000000000000000000000000000000000000000002864 183.0
MMD1_k127_2936225_6 Smr domain - - - 0.00000000000000000000000000000000000000000000000004452 186.0
MMD1_k127_2936225_7 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 GO:0006935,GO:0008150,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0044403,GO:0044419,GO:0050896,GO:0051701,GO:0051704,GO:0052116,GO:0052126,GO:0052127,GO:0052143,GO:0052192,GO:0052195,GO:0052216,GO:0052243 3.5.1.44 0.00000000000000000000000000000000000000000000000004799 183.0
MMD1_k127_2936225_8 Twitching motility two-component system response regulator PilH K02658 - - 0.000000000000000000000000000000000000000001662 159.0
MMD1_k127_2936225_9 cheY-homologous receiver domain - - - 0.0000000000000000000000000000007453 137.0
MMD1_k127_2951693_0 4Fe-4S dicluster domain - - - 2.08e-300 927.0
MMD1_k127_2951693_1 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 550.0
MMD1_k127_2951693_10 - - - - 0.000000000000000000000000000000000000001731 152.0
MMD1_k127_2951693_11 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.0000000000000000000000000000000001576 143.0
MMD1_k127_2951693_12 Transposase for insertion sequence element - - - 0.0000000000000000000000004946 116.0
MMD1_k127_2951693_14 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000231 85.0
MMD1_k127_2951693_16 lyase activity - - - 0.00000000000007426 77.0
MMD1_k127_2951693_17 Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE K06039,K07235 GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0019417,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055114,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.00000000001578 70.0
MMD1_k127_2951693_18 Transposase IS200 like - - - 0.000000001412 61.0
MMD1_k127_2951693_19 sulfur relay protein TusB DsrH K07237 - - 0.0001267 49.0
MMD1_k127_2951693_2 TIGRFAM sulfite reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 501.0
MMD1_k127_2951693_3 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 501.0
MMD1_k127_2951693_4 PFAM Nitrate reductase gamma subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 423.0
MMD1_k127_2951693_5 4 iron, 4 sulfur cluster binding K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 307.0
MMD1_k127_2951693_6 denitrification pathway - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001573 275.0
MMD1_k127_2951693_7 Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein) K03620,K08354 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000007382 243.0
MMD1_k127_2951693_8 DsrC like protein K11179 - - 0.0000000000000000000000000000000000000000000000004466 177.0
MMD1_k127_2951693_9 COG3547 Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000000000000007344 174.0
MMD1_k127_2960776_0 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 0.0 1098.0
MMD1_k127_2960776_1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 610.0
MMD1_k127_2960776_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009629 475.0
MMD1_k127_2960776_3 Respiratory-chain NADH dehydrogenase, 49 Kd subunit K13378 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 445.0
MMD1_k127_2960776_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0030964,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005481 288.0
MMD1_k127_2960776_5 Belongs to the complex I subunit 6 family K00339 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000003641 215.0
MMD1_k127_2960776_6 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000007836 184.0
MMD1_k127_2960776_7 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000006997 145.0
MMD1_k127_2960776_8 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000003851 143.0
MMD1_k127_2960776_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000151 111.0
MMD1_k127_2962358_0 PFAM Histone deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 368.0
MMD1_k127_2962358_1 Type II secretion system (T2SS), protein F K02455,K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 294.0
MMD1_k127_2962358_2 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000006779 248.0
MMD1_k127_2962358_3 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000001242 212.0
MMD1_k127_2962358_4 Extradiol ring-cleavage dioxygenase, class III K06990,K09141 - - 0.000000000000000000000000000000000000000000000000000001671 196.0
MMD1_k127_2962358_5 General secretory system II, protein E domain protein K02652 - - 0.00000000000000000000000001 126.0
MMD1_k127_2962358_6 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000004086 107.0
MMD1_k127_2965193_0 Nicotinic acid phosphoribosyltransferase K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 428.0
MMD1_k127_2965193_1 PFAM Isochorismatase K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000005653 192.0
MMD1_k127_2965193_2 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000785 179.0
MMD1_k127_2967332_0 Protein of unknown function (DUF3417) K00688 - 2.4.1.1 0.0 1237.0
MMD1_k127_2967332_1 DEAD_2 K10844 - 3.6.4.12 0.0 1047.0
MMD1_k127_2967332_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K15893 - 1.1.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 338.0
MMD1_k127_2967332_3 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009396 314.0
MMD1_k127_2967332_4 DJ-1/PfpI family K05520 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000000000009898 246.0
MMD1_k127_2967332_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000006131 209.0
MMD1_k127_2967332_6 part of a sulfur-relay system K11179 - - 0.0000000000000000000001179 105.0
MMD1_k127_2967332_8 Protein of unknown function (DUF3568) - - - 0.0000000002917 69.0
MMD1_k127_2967332_9 lyase activity - - - 0.0004188 49.0
MMD1_k127_2986255_0 O-methyltransferase activity - - - 2.689e-195 629.0
MMD1_k127_2986255_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 601.0
MMD1_k127_2986255_10 pdz dhr glgf - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004152 344.0
MMD1_k127_2986255_11 PFAM ferredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 343.0
MMD1_k127_2986255_12 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 305.0
MMD1_k127_2986255_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007268 274.0
MMD1_k127_2986255_14 ABC transporter, ATP-binding protein K02028 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000003009 267.0
MMD1_k127_2986255_15 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000006305 258.0
MMD1_k127_2986255_16 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000002647 186.0
MMD1_k127_2986255_17 response to heat K07090 - - 0.000000000000000000000000000000000000000003453 160.0
MMD1_k127_2986255_18 PFAM PHP domain - - - 0.00000000000000000000000000000000000003299 153.0
MMD1_k127_2986255_19 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000000000001807 147.0
MMD1_k127_2986255_2 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 568.0
MMD1_k127_2986255_20 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000005557 139.0
MMD1_k127_2986255_21 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000001046 134.0
MMD1_k127_2986255_22 - - - - 0.0000000000000000000002086 106.0
MMD1_k127_2986255_23 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000002986 95.0
MMD1_k127_2986255_24 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.0000000000000001311 87.0
MMD1_k127_2986255_26 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000002823 86.0
MMD1_k127_2986255_27 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000002592 76.0
MMD1_k127_2986255_28 - - - - 0.00000000000882 72.0
MMD1_k127_2986255_3 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K02029,K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 537.0
MMD1_k127_2986255_4 Rad51 K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 526.0
MMD1_k127_2986255_5 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 500.0
MMD1_k127_2986255_6 Uncharacterised ArCR, COG2043 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 386.0
MMD1_k127_2986255_7 Belongs to the CinA family K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 379.0
MMD1_k127_2986255_8 response to heat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 355.0
MMD1_k127_2986255_9 phosphorelay sensor kinase activity K03320,K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 352.0
MMD1_k127_2989937_0 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 1.024e-221 699.0
MMD1_k127_2989937_1 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009373 358.0
MMD1_k127_2989937_2 Diacylglycerol kinase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000051 222.0
MMD1_k127_2989937_3 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000007899 127.0
MMD1_k127_2989937_4 SMART Tetratricopeptide - - - 0.000000000000000000000004653 110.0
MMD1_k127_2989937_5 - - - - 0.0000000000000000000838 96.0
MMD1_k127_2989937_6 monooxygenase activity K00688,K15760,K16157,K16242,K18223,K22353,K22357 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0008150,GO:0008152,GO:0009987,GO:0015049,GO:0015050,GO:0015947,GO:0016491,GO:0016705,GO:0016709,GO:0032991,GO:0043446,GO:0044237,GO:0055114,GO:0071704,GO:1902494 1.14.13.227,1.14.13.236,1.14.13.25,1.14.13.69,2.4.1.1 0.0000004748 56.0
MMD1_k127_2993035_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 1.269e-315 997.0
MMD1_k127_2993035_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006878 574.0
MMD1_k127_2993035_10 PFAM DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003767 268.0
MMD1_k127_2993035_11 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000001947 258.0
MMD1_k127_2993035_12 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000008343 244.0
MMD1_k127_2993035_13 HlyD family secretion protein - - - 0.00000000000000000000000000000000000000000000000000000003666 211.0
MMD1_k127_2993035_14 PFAM biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.0000000000000000000000000000000000000000000000000000001702 202.0
MMD1_k127_2993035_15 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000001437 195.0
MMD1_k127_2993035_16 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070930,GO:0071704,GO:1901564 - 0.000000000000000000000000000000000000000000000000000005082 193.0
MMD1_k127_2993035_17 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.00000000000000000000000000000000000000000000000000001557 198.0
MMD1_k127_2993035_18 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000001659 198.0
MMD1_k127_2993035_19 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000006358 189.0
MMD1_k127_2993035_2 helicase superfamily c-terminal domain K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 577.0
MMD1_k127_2993035_20 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000001173 176.0
MMD1_k127_2993035_21 PFAM Protein phosphatase K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000002624 179.0
MMD1_k127_2993035_22 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000000000000004121 166.0
MMD1_k127_2993035_23 Enoyl-CoA hydratase/isomerase K13767 - 4.2.1.17 0.0000000000000000000000000000000000000000001508 169.0
MMD1_k127_2993035_24 redox protein regulator of disulfide bond formation K04063 - - 0.000000000000000000000000000000000000000003076 159.0
MMD1_k127_2993035_25 Tetratricopeptide repeat K05807 - - 0.00000000000000000000000000000000003685 145.0
MMD1_k127_2993035_26 Fe-S-cluster oxidoreductase K06940 - - 0.000000000000000000000000000000113 128.0
MMD1_k127_2993035_27 Rhodanese domain protein - - - 0.000000000000000000246 94.0
MMD1_k127_2993035_28 Domain of unknown function (DUF4388) - - - 0.00000000000000000146 101.0
MMD1_k127_2993035_29 Belongs to the UPF0250 family K09158 - - 0.0000000000000001436 82.0
MMD1_k127_2993035_3 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 514.0
MMD1_k127_2993035_30 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000002667 82.0
MMD1_k127_2993035_31 Protein of unknown function (DUF2892) - - - 0.000000000000005915 77.0
MMD1_k127_2993035_32 chaperone K03686 GO:0000002,GO:0001671,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005829,GO:0006457,GO:0006458,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006996,GO:0007005,GO:0008047,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016020,GO:0016043,GO:0019538,GO:0019866,GO:0019898,GO:0030163,GO:0030234,GO:0030544,GO:0031072,GO:0031090,GO:0031312,GO:0031314,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032781,GO:0042026,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043462,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0050790,GO:0050896,GO:0051082,GO:0051336,GO:0051345,GO:0051603,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0098772,GO:1901564,GO:1901565,GO:1901575 - 0.00000001452 68.0
MMD1_k127_2993035_33 Regulatory protein, FmdB family - - - 0.00001053 49.0
MMD1_k127_2993035_34 Tetratricopeptide repeat - - - 0.00003361 57.0
MMD1_k127_2993035_35 domain protein - - - 0.00003375 50.0
MMD1_k127_2993035_4 Putative RNA methylase family UPF0020 K07444,K12297 - 2.1.1.173,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 494.0
MMD1_k127_2993035_5 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 477.0
MMD1_k127_2993035_6 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 433.0
MMD1_k127_2993035_7 Pyridoxal-phosphate dependent enzyme K01738,K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 402.0
MMD1_k127_2993035_8 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 330.0
MMD1_k127_2993035_9 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005737 289.0
MMD1_k127_3006840_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.5e-243 760.0
MMD1_k127_3006840_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004431 276.0
MMD1_k127_3006840_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000001973 109.0
MMD1_k127_3006840_3 ATP synthase B/B' CF(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000002094 102.0
MMD1_k127_3006840_4 ATP synthesis coupled proton transport K02109 - - 0.000000000005034 73.0
MMD1_k127_3014894_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 451.0
MMD1_k127_3014894_1 Beta-ketoacyl synthase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 353.0
MMD1_k127_3014894_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 325.0
MMD1_k127_3014894_3 with different specificities (related to short-chain alcohol K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000003375 264.0
MMD1_k127_3014894_4 COG1233 Phytoene dehydrogenase and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006999 260.0
MMD1_k127_3014894_5 COG0764 3-hydroxymyristoyl 3-hydroxydecanoyl-(acyl carrier K02372 - 4.2.1.59 0.0000000000000000000000000000000008497 134.0
MMD1_k127_3014894_6 Putative methyltransferase - - - 0.00000000000001609 79.0
MMD1_k127_3014894_7 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000001793 67.0
MMD1_k127_3014894_8 PilZ domain - - - 0.0000006137 57.0
MMD1_k127_3019134_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 616.0
MMD1_k127_3019134_1 Enoyl-CoA hydratase isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004516 575.0
MMD1_k127_3019134_10 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.00000000000000000000000000000000000000000000000000001481 198.0
MMD1_k127_3019134_11 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000006189 124.0
MMD1_k127_3019134_12 Uncharacterized conserved protein (DUF2249) - - - 0.000000000000000000000000001916 113.0
MMD1_k127_3019134_13 - - - - 0.000000000000002034 85.0
MMD1_k127_3019134_14 electron transfer activity K05337,K17247 - - 0.0000000000004585 70.0
MMD1_k127_3019134_2 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 507.0
MMD1_k127_3019134_3 Chalcone and stilbene synthases, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 464.0
MMD1_k127_3019134_4 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 462.0
MMD1_k127_3019134_5 Lytic transglycosylase catalytic K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 467.0
MMD1_k127_3019134_6 Thiolase, C-terminal domain K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 442.0
MMD1_k127_3019134_7 PFAM ATP adenylyltransferase K00988 - 2.7.7.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 301.0
MMD1_k127_3019134_8 NOG31153 non supervised orthologous group - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002771 258.0
MMD1_k127_3019134_9 PFAM ADP-ribosylation Crystallin J1 - - - 0.000000000000000000000000000000000000000000000000000000000000000003517 238.0
MMD1_k127_3019646_0 Sulfate permease family K01673,K03321 - 4.2.1.1 1.963e-225 715.0
MMD1_k127_3019646_1 response to heat K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008073 434.0
MMD1_k127_3019646_2 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K05568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005685 375.0
MMD1_k127_3019646_3 - - - - 0.0000000000000000000000000000000000000006388 152.0
MMD1_k127_3019646_4 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000008587 123.0
MMD1_k127_3021073_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 324.0
MMD1_k127_3021073_1 - - - - 0.00000000000000000000000000000000000006317 146.0
MMD1_k127_3021073_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000001126 109.0
MMD1_k127_3033583_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 514.0
MMD1_k127_3033583_1 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003273 428.0
MMD1_k127_3033583_10 SnoaL-like polyketide cyclase - - - 0.000000000000000000000001083 109.0
MMD1_k127_3033583_11 extracellular matrix structural constituent K02035 - - 0.000000000000000258 93.0
MMD1_k127_3033583_12 SnoaL-like domain - - - 0.0000000001321 67.0
MMD1_k127_3033583_2 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008295 333.0
MMD1_k127_3033583_3 Protein of unknown function (DUF1579) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001619 266.0
MMD1_k127_3033583_4 Flavodoxin-like fold K19784 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001008 259.0
MMD1_k127_3033583_5 Regulator of chromosome condensation (RCC1) repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001442 267.0
MMD1_k127_3033583_6 methylglyoxal synthase activity K01734 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008150,GO:0008152,GO:0008929,GO:0009058,GO:0009438,GO:0009987,GO:0016829,GO:0016835,GO:0016838,GO:0019242,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0071704,GO:1901576 4.2.3.3 0.0000000000000000000000000000000000000000000000000000000000000000002282 233.0
MMD1_k127_3033583_7 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.0000000000000000000000000000000000000000000000000000000002495 210.0
MMD1_k127_3033583_8 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000000000000000000007731 194.0
MMD1_k127_3033583_9 part of a sulfur-relay system K11179 - - 0.0000000000000000000000000000000125 130.0
MMD1_k127_3037282_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 585.0
MMD1_k127_3037282_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005691 583.0
MMD1_k127_3037282_10 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 311.0
MMD1_k127_3037282_11 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004164 271.0
MMD1_k127_3037282_12 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000005208 240.0
MMD1_k127_3037282_13 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000005429 221.0
MMD1_k127_3037282_14 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000002569 118.0
MMD1_k127_3037282_15 - - - - 0.0000000000000000000000003329 111.0
MMD1_k127_3037282_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 527.0
MMD1_k127_3037282_3 electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 474.0
MMD1_k127_3037282_4 AIR synthase related protein domain protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 460.0
MMD1_k127_3037282_5 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 442.0
MMD1_k127_3037282_6 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 356.0
MMD1_k127_3037282_7 Acyl transferase domain K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 340.0
MMD1_k127_3037282_8 electron transfer activity K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016020,GO:0016491,GO:0022900,GO:0030312,GO:0040007,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 333.0
MMD1_k127_3037282_9 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 316.0
MMD1_k127_3046575_0 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 314.0
MMD1_k127_3046575_1 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005924 287.0
MMD1_k127_3046575_2 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000000000000000000009818 232.0
MMD1_k127_3046575_3 SurA N-terminal domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000005803 175.0
MMD1_k127_3046575_4 SurA N-terminal domain K03771 - 5.2.1.8 0.000000000000000000000000000000000001507 159.0
MMD1_k127_3046575_5 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769,K03770 - 5.2.1.8 0.00000121 59.0
MMD1_k127_3054209_0 MoaE protein K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000008978 184.0
MMD1_k127_3054209_1 metalloendopeptidase activity K03799 - - 0.00000000000000004208 89.0
MMD1_k127_3056015_0 Heat shock 70 kDa protein K04043 - - 2.021e-298 927.0
MMD1_k127_3056015_1 PFAM Aminotransferase class I and II K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 556.0
MMD1_k127_3056015_10 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000001113 190.0
MMD1_k127_3056015_11 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950,K13940 - 2.7.6.3,4.1.2.25 0.0000000000000000000000000000000000004155 145.0
MMD1_k127_3056015_12 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000005646 127.0
MMD1_k127_3056015_13 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000208 123.0
MMD1_k127_3056015_15 - - - - 0.000000000001459 74.0
MMD1_k127_3056015_16 - - - - 0.00000002129 66.0
MMD1_k127_3056015_2 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850,K00895,K21071 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008443,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0046872,GO:0047334,GO:0071704,GO:1901135 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 488.0
MMD1_k127_3056015_3 DnaJ central domain K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 442.0
MMD1_k127_3056015_4 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 343.0
MMD1_k127_3056015_5 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 310.0
MMD1_k127_3056015_6 HrcA protein C terminal domain K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 303.0
MMD1_k127_3056015_7 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005616 271.0
MMD1_k127_3056015_8 Deoxynucleoside kinase K15518 - 2.7.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000001424 257.0
MMD1_k127_3056015_9 channel protein, hemolysin III family K11068 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001854 252.0
MMD1_k127_3056217_0 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 517.0
MMD1_k127_3056217_1 2Fe-2S iron-sulfur cluster binding domain K00240,K00245 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 404.0
MMD1_k127_3056217_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009791 398.0
MMD1_k127_3056217_3 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 296.0
MMD1_k127_3056217_4 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000009624 195.0
MMD1_k127_3056217_5 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000003016 71.0
MMD1_k127_3061508_0 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 492.0
MMD1_k127_3061508_1 Lytic transglycosylase, SLT, LysM and LysM domain-containing K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 349.0
MMD1_k127_3061508_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000003294 224.0
MMD1_k127_3061508_3 Fibronectin-binding protein - - - 0.00000000000000000000000000000000000000000000000000000001888 216.0
MMD1_k127_3061508_4 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000002525 180.0
MMD1_k127_3061508_5 Lipoprotein - - - 0.0000000000000000005748 101.0
MMD1_k127_3061508_6 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000009399 90.0
MMD1_k127_3061508_7 cell envelope organization K05807,K08309 - - 0.000000004741 66.0
MMD1_k127_3061508_9 TRL-like protein family - - - 0.000008218 53.0
MMD1_k127_3062131_0 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 459.0
MMD1_k127_3062131_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 451.0
MMD1_k127_3062131_10 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00011 53.0
MMD1_k127_3062131_2 PFAM NAD dependent epimerase dehydratase family K01784,K17947 - 5.1.3.2,5.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 306.0
MMD1_k127_3062131_3 Glycosyltransferase like family 2 K20534 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 293.0
MMD1_k127_3062131_4 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000007602 231.0
MMD1_k127_3062131_5 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000009738 192.0
MMD1_k127_3062131_6 radical SAM domain protein K22227 - - 0.0000000000000000000000000000005667 137.0
MMD1_k127_3062131_8 Bacterial membrane protein, YfhO - - - 0.0000000008499 72.0
MMD1_k127_3062131_9 Bacterial membrane protein, YfhO - - - 0.0000004897 63.0
MMD1_k127_3070259_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.363e-256 806.0
MMD1_k127_3070259_1 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 509.0
MMD1_k127_3070259_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 461.0
MMD1_k127_3070259_3 response regulator K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001561 266.0
MMD1_k127_3070259_4 histidine kinase HAMP region domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000002947 234.0
MMD1_k127_3070259_5 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000002214 214.0
MMD1_k127_3070259_6 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000004076 197.0
MMD1_k127_3070259_7 - - - - 0.0000000000000000002222 90.0
MMD1_k127_3071983_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005985 420.0
MMD1_k127_3071983_1 Metal-dependent phosphohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002372 254.0
MMD1_k127_3071983_2 PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000005919 245.0
MMD1_k127_3071983_3 PFAM Cupin - - - 0.000000000000000000000000000000000000000000007847 170.0
MMD1_k127_3073261_0 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009908 460.0
MMD1_k127_3073261_1 Protein of unknown function (DUF998) - - - 0.00000000000000000000000000000000000000000000000000000004971 202.0
MMD1_k127_3073261_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06996 - - 0.00000000000000000000000000000000000000000000000008989 181.0
MMD1_k127_3073261_3 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000004882 179.0
MMD1_k127_3073261_4 domain protein - - - 0.0000000000000000000000000000000000000007295 171.0
MMD1_k127_3073261_5 periplasmic lipoprotein - - - 0.00000000004746 66.0
MMD1_k127_3073261_6 PFAM Fibronectin type III domain - - - 0.00003388 57.0
MMD1_k127_3077398_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005798 572.0
MMD1_k127_3077398_1 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005185 287.0
MMD1_k127_3084580_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 473.0
MMD1_k127_3084580_1 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000005946 201.0
MMD1_k127_3084580_2 PFAM response regulator receiver - - - 0.0000000000000000000001725 102.0
MMD1_k127_3084580_3 histidine kinase HAMP region domain protein K03406 - - 0.00000000000000000009013 91.0
MMD1_k127_3092866_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1266.0
MMD1_k127_3092866_1 PFAM AMP-dependent synthetase and ligase K01908 - 6.2.1.17 0.0 1019.0
MMD1_k127_3092866_10 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 357.0
MMD1_k127_3092866_11 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 352.0
MMD1_k127_3092866_12 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 334.0
MMD1_k127_3092866_13 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 327.0
MMD1_k127_3092866_14 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 327.0
MMD1_k127_3092866_15 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 303.0
MMD1_k127_3092866_16 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 288.0
MMD1_k127_3092866_17 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 289.0
MMD1_k127_3092866_18 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000177 259.0
MMD1_k127_3092866_19 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000009305 207.0
MMD1_k127_3092866_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.538e-262 823.0
MMD1_k127_3092866_20 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000003988 201.0
MMD1_k127_3092866_21 TonB-dependent receptor K16092 - - 0.000000000000000000000000000000000000000000000000006365 203.0
MMD1_k127_3092866_22 ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000008466 189.0
MMD1_k127_3092866_23 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000005739 183.0
MMD1_k127_3092866_24 PFAM periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000001048 182.0
MMD1_k127_3092866_25 Protein of unknown function (DUF2845) - - - 0.000000000000000000000000000000002915 136.0
MMD1_k127_3092866_26 Fe-S cluster domain protein - - - 0.00000000000000000000000000000002315 136.0
MMD1_k127_3092866_27 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000000000001191 106.0
MMD1_k127_3092866_28 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000003999 90.0
MMD1_k127_3092866_29 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 GO:0003674,GO:0004857,GO:0005488,GO:0008150,GO:0008270,GO:0008657,GO:0010911,GO:0030234,GO:0032780,GO:0042030,GO:0043086,GO:0043167,GO:0043169,GO:0043462,GO:0044092,GO:0046872,GO:0046914,GO:0050790,GO:0051336,GO:0051346,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0072586,GO:0098772,GO:2000371,GO:2000372 - 0.0000000000000001803 81.0
MMD1_k127_3092866_3 2-methylcitrate dehydratase K01720 - 4.2.1.79 5.779e-262 812.0
MMD1_k127_3092866_30 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000001143 66.0
MMD1_k127_3092866_31 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000583 57.0
MMD1_k127_3092866_4 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008749 597.0
MMD1_k127_3092866_5 Belongs to the citrate synthase family K01659 - 2.3.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 583.0
MMD1_k127_3092866_6 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 541.0
MMD1_k127_3092866_7 ATPase, AAA K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 497.0
MMD1_k127_3092866_8 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841,K03417 - 4.1.3.30,5.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003621 451.0
MMD1_k127_3092866_9 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601,K03797 - 3.1.11.6,3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008324 394.0
MMD1_k127_3102091_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 574.0
MMD1_k127_3102091_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 405.0
MMD1_k127_3102091_2 PFAM ribonuclease H K03469,K06864 - 3.1.26.4 0.00000000000000000000000000000000000002598 148.0
MMD1_k127_3102091_3 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000000000217 129.0
MMD1_k127_3102091_4 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000001125 124.0
MMD1_k127_3105011_0 Domain of unknown function (DUF4445) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 434.0
MMD1_k127_3105011_1 Methionine synthase, cobalamin (vitamin B12)-binding module, cap - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 293.0
MMD1_k127_3105011_2 TIGRFAM iron-sulfur cluster binding protein - - - 0.0000000000000000000000000000000000000000000001553 175.0
MMD1_k127_3116774_0 Belongs to the PEP-utilizing enzyme family K01006,K22424 - 2.7.3.13,2.7.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 581.0
MMD1_k127_3116774_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000001246 229.0
MMD1_k127_3116774_2 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000001915 226.0
MMD1_k127_3116774_3 - - - - 0.000000000003651 72.0
MMD1_k127_3116774_4 Transcriptional regulator antitoxin, MazE K07172 - - 0.0001291 46.0
MMD1_k127_3116789_0 SMART Rhodanese domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002982 261.0
MMD1_k127_3116789_1 Sulphur transport K07112 - - 0.000000000000000000002604 98.0
MMD1_k127_3116789_2 Dystroglycan-type cadherin-like domains. - - - 0.000000237 53.0
MMD1_k127_3116973_0 Peptidase U62 modulator of DNA gyrase K03568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 287.0
MMD1_k127_3116973_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001765 270.0
MMD1_k127_3116973_2 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001199 265.0
MMD1_k127_3116973_3 molybdenum cofactor - - - 0.0000000000000000000000000000000000000000000000000000000000000004228 224.0
MMD1_k127_3116973_4 Yip1 domain - - - 0.00000000000000000000000000000000000008081 155.0
MMD1_k127_3116973_5 Protein of unknown function (DUF2752) - - - 0.0000161 54.0
MMD1_k127_3160542_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 474.0
MMD1_k127_3160542_1 Transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001517 258.0
MMD1_k127_3160542_2 RuvA, C-terminal domain K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000001437 191.0
MMD1_k127_3160542_3 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000000000005509 179.0
MMD1_k127_3160542_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0003596 49.0
MMD1_k127_3161113_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 420.0
MMD1_k127_3161113_1 pfam abc K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 370.0
MMD1_k127_3161113_2 ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 313.0
MMD1_k127_3161113_3 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007656 263.0
MMD1_k127_3161113_4 DNA polymerase X family K02347 - - 0.00000000000000000000000000000000000000000000000000000000000002437 218.0
MMD1_k127_3168122_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 317.0
MMD1_k127_3168122_1 cytochrome complex assembly - - - 0.0000000000000000000000000000000000000000000000000000000001957 209.0
MMD1_k127_3168122_2 cytochrome c biogenesis protein - - - 0.00000000000000000000000000000004897 139.0
MMD1_k127_3173840_0 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 456.0
MMD1_k127_3173840_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11779,K11784 - 1.21.98.1,2.5.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000588 389.0
MMD1_k127_3183343_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1009.0
MMD1_k127_3183343_1 PFAM flavin reductase domain protein FMN-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000001569 228.0
MMD1_k127_3183343_2 SnoaL-like domain - - - 0.0000000000000000000000000000000000762 140.0
MMD1_k127_3183343_3 Helix-turn-helix domain - - - 0.0000000000000001038 81.0
MMD1_k127_31926_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 7.01e-255 799.0
MMD1_k127_31926_1 pilus assembly protein K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005704 349.0
MMD1_k127_31926_2 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K11686,K13640,K18997 - - 0.0000000000000000357 82.0
MMD1_k127_3195649_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 2e-269 862.0
MMD1_k127_3195649_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006477 561.0
MMD1_k127_3195649_10 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 341.0
MMD1_k127_3195649_11 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 309.0
MMD1_k127_3195649_12 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K14986 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 303.0
MMD1_k127_3195649_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004614 292.0
MMD1_k127_3195649_14 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005573 274.0
MMD1_k127_3195649_15 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000586 242.0
MMD1_k127_3195649_16 Putative bacterial lipoprotein (DUF799) - - - 0.00000000000000000000000000000000000000000000000000000000001415 213.0
MMD1_k127_3195649_17 - - - - 0.00000000000000000000000000000000001634 147.0
MMD1_k127_3195649_18 Cytochrome c7 and related cytochrome c - - - 0.00000000000000005932 85.0
MMD1_k127_3195649_19 Bacterial regulatory protein, Fis family - - - 0.00000000000000196 85.0
MMD1_k127_3195649_2 Bacterial membrane protein, YfhO - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 572.0
MMD1_k127_3195649_20 - - - - 0.000000000000002018 84.0
MMD1_k127_3195649_21 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000002047 62.0
MMD1_k127_3195649_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 511.0
MMD1_k127_3195649_4 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 485.0
MMD1_k127_3195649_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 467.0
MMD1_k127_3195649_6 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 459.0
MMD1_k127_3195649_7 PFAM Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 466.0
MMD1_k127_3195649_8 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 401.0
MMD1_k127_3195649_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 399.0
MMD1_k127_3239825_0 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 445.0
MMD1_k127_3239825_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 439.0
MMD1_k127_3239825_2 COG0463 Glycosyltransferases involved in cell wall biogenesis K13002 - - 0.0000000000000000000000000000000000000000000000000000000000000000001295 240.0
MMD1_k127_3239825_3 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.00000000000000000000000000000000000000000000274 176.0
MMD1_k127_3239825_4 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose - - - 0.000000000000000000000001458 104.0
MMD1_k127_3258866_0 HEPN domain - - - 0.00000000003476 69.0
MMD1_k127_3258866_1 helix_turn_helix, Lux Regulon - - - 0.0004736 51.0
MMD1_k127_3285546_0 molybdopterin oxidoreductase Fe4S4 region K05299 - 1.17.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003538 467.0
MMD1_k127_3285546_1 NADH dehydrogenase K00335,K18331 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 411.0
MMD1_k127_3292198_0 Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrD may act as the catalytic subunit K08264 GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009061,GO:0009987,GO:0015947,GO:0015948,GO:0015975,GO:0015980,GO:0016491,GO:0016667,GO:0043446,GO:0043447,GO:0044237,GO:0044249,GO:0045333,GO:0051912,GO:0055114,GO:0071704,GO:1901576 1.8.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 316.0
MMD1_k127_3292198_1 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002668 258.0
MMD1_k127_3292198_2 PFAM Nitrate reductase gamma subunit - - - 0.000000000000000000000004745 111.0
MMD1_k127_3292198_3 - - - - 0.00000000000000001624 87.0
MMD1_k127_3311139_0 DNA topoisomerase II activity K02469,K02621 GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008152,GO:0009330,GO:0009987,GO:0016020,GO:0016043,GO:0019897,GO:0019898,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0098813,GO:1901360,GO:1901363 5.99.1.3 6.789e-227 726.0
MMD1_k127_3311139_1 Histone deacetylase domain K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007582 352.0
MMD1_k127_3311139_2 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001747 265.0
MMD1_k127_3311139_3 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000000000000000000000000000000000000000000002932 221.0
MMD1_k127_3311139_4 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000001413 180.0
MMD1_k127_3339803_0 MCRA family K10254 - 4.2.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 305.0
MMD1_k127_3339803_1 diguanylate cyclase - - - 0.00000000000000000000000000000000000001049 162.0
MMD1_k127_336266_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.566e-246 774.0
MMD1_k127_336266_1 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 5.22e-208 661.0
MMD1_k127_336266_10 Alternative locus ID K10697 - - 0.0000000000000004917 91.0
MMD1_k127_336266_11 Chemotaxis protein histidine kinase and related kinases K02487,K06596 - - 0.0000000004883 70.0
MMD1_k127_336266_2 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 365.0
MMD1_k127_336266_3 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 347.0
MMD1_k127_336266_4 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006278 310.0
MMD1_k127_336266_5 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001642 286.0
MMD1_k127_336266_6 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007088 277.0
MMD1_k127_336266_7 Protein of unknown function DUF47 K02039,K07220 - - 0.00000000000000000000000000000000000000000000003615 179.0
MMD1_k127_336266_8 - - - - 0.000000000000000000000007303 105.0
MMD1_k127_336266_9 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.000000000000000000002057 99.0
MMD1_k127_336695_0 alpha-2-macroglobulin domain protein K06894 - - 0.0 1370.0
MMD1_k127_336695_1 S-layer homology domain - - - 0.0006343 43.0
MMD1_k127_3394245_0 Putative diguanylate phosphodiesterase - - - 3.22e-198 646.0
MMD1_k127_3394245_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 523.0
MMD1_k127_3394245_10 Uncharacterized ACR, COG1430 K09005 - - 0.00000000005454 75.0
MMD1_k127_3394245_11 His Kinase A (phosphoacceptor) domain - - - 0.000000001284 68.0
MMD1_k127_3394245_12 PFAM DsrE family protein K07235 - - 0.000002452 55.0
MMD1_k127_3394245_13 sulfur relay protein TusB DsrH K07237 - - 0.00009637 49.0
MMD1_k127_3394245_2 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 475.0
MMD1_k127_3394245_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 379.0
MMD1_k127_3394245_4 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 308.0
MMD1_k127_3394245_5 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009315 299.0
MMD1_k127_3394245_6 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 295.0
MMD1_k127_3394245_7 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008397 280.0
MMD1_k127_3394245_8 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000002416 123.0
MMD1_k127_3394245_9 DNA-binding transcription factor activity K03655,K03892,K21903 - 3.6.4.12 0.00000000000000000000004018 102.0
MMD1_k127_3399043_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 8.893e-231 727.0
MMD1_k127_3399043_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 566.0
MMD1_k127_3399043_2 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 363.0
MMD1_k127_3399043_3 Lytic transglycolase K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001971 272.0
MMD1_k127_3399043_4 protocatechuate 3,4-dioxygenase activity K03381 - 1.13.11.1 0.000000000000000000000000000000000000000000000001537 177.0
MMD1_k127_3399043_5 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000001158 169.0
MMD1_k127_3399043_6 - - - - 0.000000000000000000000000001979 114.0
MMD1_k127_3399043_8 - - - - 0.000000000000549 77.0
MMD1_k127_3426515_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.231e-205 654.0
MMD1_k127_3426515_1 Nitronate monooxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007491 493.0
MMD1_k127_3426515_10 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 297.0
MMD1_k127_3426515_11 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003773 279.0
MMD1_k127_3426515_12 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002597 281.0
MMD1_k127_3426515_13 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002461 255.0
MMD1_k127_3426515_14 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000009374 239.0
MMD1_k127_3426515_15 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000002385 233.0
MMD1_k127_3426515_16 Cytidylate kinase K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000003784 235.0
MMD1_k127_3426515_17 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000221 227.0
MMD1_k127_3426515_18 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000004184 213.0
MMD1_k127_3426515_19 Domain of unknown function (DUF4253) - - - 0.0000000000000000000000000000000001344 142.0
MMD1_k127_3426515_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 484.0
MMD1_k127_3426515_20 bacterial (prokaryotic) histone like domain K05788 - - 0.00000000000000000000000000001132 120.0
MMD1_k127_3426515_21 PFAM RNA recognition motif - - - 0.000000000000000000000000009298 113.0
MMD1_k127_3426515_22 - - - - 0.00000000000000000000000003172 119.0
MMD1_k127_3426515_23 PFAM Heavy metal transport detoxification protein K07213 - - 0.00000000000006029 77.0
MMD1_k127_3426515_24 deoxyhypusine monooxygenase activity - - - 0.0000000000002507 76.0
MMD1_k127_3426515_25 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000000001075 70.0
MMD1_k127_3426515_26 Hfq protein K03666 - - 0.00003435 52.0
MMD1_k127_3426515_27 HEAT repeat - - - 0.0006244 52.0
MMD1_k127_3426515_3 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 462.0
MMD1_k127_3426515_4 response regulator receiver K02481,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007015 458.0
MMD1_k127_3426515_5 Chorismate mutase type II K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 443.0
MMD1_k127_3426515_6 Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 396.0
MMD1_k127_3426515_7 Domains HisKA, HATPase_c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 321.0
MMD1_k127_3426515_8 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 313.0
MMD1_k127_3426515_9 Cytochrome c3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 308.0
MMD1_k127_3526642_0 Surface antigen K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 370.0
MMD1_k127_3526642_1 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003057 244.0
MMD1_k127_3526642_2 Diguanylate cyclase - - - 0.00000000000000000000005278 115.0
MMD1_k127_3526642_3 GAF domain K02482 - 2.7.13.3 0.000000000000000008217 98.0
MMD1_k127_3526642_4 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 - 5.2.1.8 0.0000000001227 71.0
MMD1_k127_3645064_0 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000004996 219.0
MMD1_k127_3645064_1 Formiminotransferase-cyclodeaminase - - - 0.000000000000000000000000000000000000000001977 163.0
MMD1_k127_3645064_2 Transcriptional regulator, MerR family - - - 0.00000000000000000000000000009498 120.0
MMD1_k127_3645064_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000003303 64.0
MMD1_k127_3654062_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 576.0
MMD1_k127_3654062_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 541.0
MMD1_k127_3654062_2 Evidence 2b Function of strongly homologous gene - - - 0.000000000000000000000000000000000000002465 147.0
MMD1_k127_3654483_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 456.0
MMD1_k127_3654483_1 Permease YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000796 250.0
MMD1_k127_3654483_2 PFAM permease YjgP YjgQ family protein K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000004996 237.0
MMD1_k127_3654483_3 - - - - 0.00000000000000000000006027 108.0
MMD1_k127_366454_0 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 316.0
MMD1_k127_366454_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005729 289.0
MMD1_k127_366454_2 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000000000000000000001153 131.0
MMD1_k127_366454_3 Universal stress protein family - - - 0.00000000000000000002632 98.0
MMD1_k127_366454_4 PFAM Fibronectin type III domain - - - 0.00006235 51.0
MMD1_k127_3667716_0 ATPase BadF BadG BcrA BcrD type - - - 0.0 1532.0
MMD1_k127_3667716_1 PFAM Transketolase K00615 - 2.2.1.1 9.249e-248 779.0
MMD1_k127_3667716_10 DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 313.0
MMD1_k127_3667716_11 PFAM Rubrerythrin - GO:0003674,GO:0005488,GO:0005506,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 284.0
MMD1_k127_3667716_12 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001538 278.0
MMD1_k127_3667716_13 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000002698 261.0
MMD1_k127_3667716_14 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004362 265.0
MMD1_k127_3667716_15 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009775 256.0
MMD1_k127_3667716_16 carbohydrate transport K11688,K21395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006554 255.0
MMD1_k127_3667716_17 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005403 246.0
MMD1_k127_3667716_18 Protein of unknown function (DUF3047) - - - 0.000000000000000000000000000000000000000000000000000000000000000000006081 243.0
MMD1_k127_3667716_19 Phospholipase D. Active site motifs. - - - 0.00000000000000000000000000000000000000000000000000000000000000009229 237.0
MMD1_k127_3667716_2 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 613.0
MMD1_k127_3667716_20 Signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000001171 188.0
MMD1_k127_3667716_21 protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000000000000000000001985 182.0
MMD1_k127_3667716_22 Protein of unknown function (DUF1499) - - - 0.00000000000000000000000000000000000000000006525 168.0
MMD1_k127_3667716_23 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000004854 157.0
MMD1_k127_3667716_24 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000004915 165.0
MMD1_k127_3667716_25 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000003116 108.0
MMD1_k127_3667716_26 redox protein regulator of disulfide bond formation K07397 - - 0.00000000000000000000001583 107.0
MMD1_k127_3667716_27 PFAM PAP2 superfamily K19302 - 3.6.1.27 0.00000000000000000001952 98.0
MMD1_k127_3667716_28 Ogr/Delta-like zinc finger - - - 0.000000000002542 77.0
MMD1_k127_3667716_29 Flagellar basal body rod K02396 - - 0.00007398 52.0
MMD1_k127_3667716_3 mannitol 2-dehydrogenase activity K11690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 546.0
MMD1_k127_3667716_4 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009451 520.0
MMD1_k127_3667716_5 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006149 509.0
MMD1_k127_3667716_6 Pyridine nucleotide-disulphide oxidoreductase K00520 - 1.16.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 496.0
MMD1_k127_3667716_7 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 444.0
MMD1_k127_3667716_8 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 432.0
MMD1_k127_3667716_9 Protein of unknown function (DUF3641) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 337.0
MMD1_k127_3670568_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 0.0 1101.0
MMD1_k127_3670568_1 GMC oxidoreductase K03333 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016614,GO:0016899,GO:0016995,GO:0044419,GO:0051704,GO:0055114 1.1.3.6 4.575e-221 696.0
MMD1_k127_3670568_10 acetyltransferase K00661 - 2.3.1.79 0.00000000000000000000000000000000000000000000000000000000000004975 218.0
MMD1_k127_3670568_11 - - - - 0.0000000000000000000000000000000000000000000000000000000001849 213.0
MMD1_k127_3670568_12 ADP-glyceromanno-heptose 6-epimerase activity K01784 - 5.1.3.2 0.0000000000000000000000001027 119.0
MMD1_k127_3670568_13 Membrane - - - 0.00000000000000003358 89.0
MMD1_k127_3670568_2 PFAM Cys Met metabolism K01739,K01760,K01761 - 2.5.1.48,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006545 507.0
MMD1_k127_3670568_3 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 432.0
MMD1_k127_3670568_4 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 391.0
MMD1_k127_3670568_5 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009678 334.0
MMD1_k127_3670568_6 Uncharacterised conserved protein (DUF2156) K01163 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 326.0
MMD1_k127_3670568_7 CO dehydrogenase acetyl-CoA synthase gamma subunit (Corrinoid Fe-S protein) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 301.0
MMD1_k127_3670568_8 AMP binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001666 271.0
MMD1_k127_3670568_9 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000002979 230.0
MMD1_k127_3671217_0 PBP superfamily domain K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 380.0
MMD1_k127_3671217_1 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.0000000000000000000000000000000004276 137.0
MMD1_k127_3671217_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000005165 74.0
MMD1_k127_3685175_0 Belongs to the dihydrofolate reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007691 339.0
MMD1_k127_3685175_1 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 340.0
MMD1_k127_3685175_2 Belongs to the dihydrofolate reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 314.0
MMD1_k127_3685175_3 glyoxalase III activity - - - 0.00000000000000000000000000000000000000000000000000001373 195.0
MMD1_k127_3698212_0 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 500.0
MMD1_k127_3698212_1 PFAM PfkB domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 438.0
MMD1_k127_3698212_10 Mut7-C RNAse domain K09122 - - 0.00000000000000000000000000000000009142 138.0
MMD1_k127_3698212_11 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000001341 97.0
MMD1_k127_3698212_12 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000000007471 98.0
MMD1_k127_3698212_13 Psort location CytoplasmicMembrane, score 10.00 K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000000000000006835 83.0
MMD1_k127_3698212_14 Type IV pilus biogenesis stability protein PilW K02656 - - 0.000000000000009594 83.0
MMD1_k127_3698212_15 - - - - 0.00000003838 65.0
MMD1_k127_3698212_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0000018,GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0032300,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 441.0
MMD1_k127_3698212_3 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 417.0
MMD1_k127_3698212_4 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 411.0
MMD1_k127_3698212_5 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 376.0
MMD1_k127_3698212_6 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 326.0
MMD1_k127_3698212_7 Elongation factor G, domain IV K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928 321.0
MMD1_k127_3698212_8 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001309 276.0
MMD1_k127_3698212_9 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000001558 183.0
MMD1_k127_3699832_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 6.989e-294 915.0
MMD1_k127_3699832_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 560.0
MMD1_k127_3699832_10 protein histidine kinase activity K07675 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000007489 243.0
MMD1_k127_3699832_11 inositol monophosphate 1-phosphatase activity K01082,K01092 - 3.1.3.25,3.1.3.7 0.00000000000000000000000000000000000000000000000000000007586 209.0
MMD1_k127_3699832_12 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000216 171.0
MMD1_k127_3699832_13 Phospholipid methyltransferase - - - 0.000000000000000000001444 102.0
MMD1_k127_3699832_14 serine threonine protein kinase - - - 0.0000000000000007479 87.0
MMD1_k127_3699832_15 Domain of unknown function (DUF4124) - - - 0.000004855 57.0
MMD1_k127_3699832_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005051 463.0
MMD1_k127_3699832_3 Sigma-54 interaction domain K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009154 442.0
MMD1_k127_3699832_4 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006303 291.0
MMD1_k127_3699832_5 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001265 258.0
MMD1_k127_3699832_6 ADP-ribosylation factor family K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000001803 258.0
MMD1_k127_3699832_7 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K21030 - 2.7.7.40,2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000000000004624 238.0
MMD1_k127_3699832_8 Serine acetyltransferase, N-terminal K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000001937 226.0
MMD1_k127_3699832_9 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000004327 218.0
MMD1_k127_3704877_0 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 582.0
MMD1_k127_3704877_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 316.0
MMD1_k127_3704877_2 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001156 263.0
MMD1_k127_3704877_3 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000002578 244.0
MMD1_k127_3704877_4 dolichyl monophosphate biosynthetic process - - - 0.0000000000007099 77.0
MMD1_k127_3707915_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 518.0
MMD1_k127_3707915_1 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008551 394.0
MMD1_k127_3707915_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 366.0
MMD1_k127_3707915_3 Nad-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 295.0
MMD1_k127_3707915_4 Small Multidrug Resistance protein - - - 0.0000000003799 61.0
MMD1_k127_370901_0 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 487.0
MMD1_k127_370901_1 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00162,K21417 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 409.0
MMD1_k127_370901_2 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 317.0
MMD1_k127_370901_3 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 317.0
MMD1_k127_370901_4 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000000000000000000003161 184.0
MMD1_k127_370901_5 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000007045 159.0
MMD1_k127_370901_6 Glycosyl transferase, family 2 - - - 0.0000000000000000000000007025 116.0
MMD1_k127_370901_7 Dehydrogenase E1 component K00161,K21416 - 1.2.4.1 0.00000000000000000004174 92.0
MMD1_k127_370901_8 Glycosyl transferase, family 2 K00721 - 2.4.1.83 0.000000000000000006397 93.0
MMD1_k127_370901_9 Bacterial membrane protein, YfhO - - - 0.0000004434 63.0
MMD1_k127_3711778_0 Acyl-protein synthetase, LuxE - - - 2.086e-263 817.0
MMD1_k127_3711778_1 SMART Elongator protein 3 MiaB NifB - - - 3.132e-235 733.0
MMD1_k127_3711778_10 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001179 276.0
MMD1_k127_3711778_11 Beta-lactamase K17836 - 3.5.2.6 0.000000000000000000000000000000000000000000000004736 185.0
MMD1_k127_3711778_2 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 4.308e-200 634.0
MMD1_k127_3711778_3 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 460.0
MMD1_k127_3711778_4 cytochrome complex assembly - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004419 440.0
MMD1_k127_3711778_5 PFAM UvrB UvrC protein K08999,K19405,K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 2.7.14.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000637 464.0
MMD1_k127_3711778_6 cytochrome c biogenesis protein K07399 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003412 374.0
MMD1_k127_3711778_7 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 312.0
MMD1_k127_3711778_8 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 307.0
MMD1_k127_3711778_9 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004012 280.0
MMD1_k127_3713469_0 long-chain fatty acid transport protein - - - 0.0 1786.0
MMD1_k127_3713469_1 Domain of unknown function DUF11 - - - 0.0 1119.0
MMD1_k127_3713469_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 373.0
MMD1_k127_3713469_3 response regulator receiver K02481,K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007288 362.0
MMD1_k127_3713469_4 6 heme-binding sites - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007335 296.0
MMD1_k127_3713469_5 TIGRFAM conserved repeat domain - - - 0.00000000000000000000000000000000000001093 150.0
MMD1_k127_3713469_6 TIGRFAM conserved repeat domain - - - 0.00000000000000000000000000000004254 139.0
MMD1_k127_3713469_7 PFAM Fibronectin, type III domain - - - 0.0000000000000000000000000000006067 139.0
MMD1_k127_3713469_8 LytTr DNA-binding domain - - - 0.00000000000000000008891 93.0
MMD1_k127_3713469_9 cytochrome - - - 0.00000000000000001134 98.0
MMD1_k127_3736273_0 antibiotic catabolic process K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 426.0
MMD1_k127_3736273_1 Fe-S type, tartrate fumarate subfamily, alpha K01677 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 370.0
MMD1_k127_3736273_2 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 296.0
MMD1_k127_3736273_3 Hydro-lyase, Fe-S type, tartrate fumarate subfamily, beta subunit K01678 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000001317 255.0
MMD1_k127_3736273_4 PFAM nickel-dependent hydrogenase large subunit K00436,K14126 - 1.12.1.2,1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000879 212.0
MMD1_k127_3736273_5 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000003983 127.0
MMD1_k127_3741533_0 Succinyl-CoA ligase like flavodoxin domain K01905,K22224 - 6.2.1.13 3.498e-236 750.0
MMD1_k127_3741533_1 PFAM Acetyl-CoA hydrolase transferase K18122 - - 7.464e-218 683.0
MMD1_k127_3741533_10 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000005344 197.0
MMD1_k127_3741533_11 TIGRFAM cytochrome C family protein - - - 0.0000000000000000000000000000000000002447 152.0
MMD1_k127_3741533_12 PLD-like domain - - - 0.00000000000000000000000000000001132 137.0
MMD1_k127_3741533_13 Domain of unknown function (DUF4149) - - - 0.0000000000000000000000000008425 119.0
MMD1_k127_3741533_14 - - - - 0.00000000000000000000000006087 113.0
MMD1_k127_3741533_16 PFAM UvrB UvrC protein K08999,K19405,K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 2.7.14.1 0.000000001853 70.0
MMD1_k127_3741533_2 Belongs to the aldehyde dehydrogenase family K00128,K00129 - 1.2.1.3,1.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 535.0
MMD1_k127_3741533_3 ATP-binding region, ATPase domain protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 491.0
MMD1_k127_3741533_4 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 404.0
MMD1_k127_3741533_5 Oligopeptide/dipeptide transporter, C-terminal region K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 381.0
MMD1_k127_3741533_6 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 384.0
MMD1_k127_3741533_7 belongs to the CobB CobQ family K06873 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 347.0
MMD1_k127_3741533_8 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826,K02619 - 2.6.1.42,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008241 316.0
MMD1_k127_3741533_9 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000007275 213.0
MMD1_k127_3774989_0 Histidine kinase K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 419.0
MMD1_k127_3774989_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000828 406.0
MMD1_k127_3774989_2 PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000004192 237.0
MMD1_k127_3774989_3 Beta-lactamase K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000938 184.0
MMD1_k127_3774989_4 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000000000000005109 110.0
MMD1_k127_3774989_5 PFAM Cupin - - - 0.00000000000000000004538 91.0
MMD1_k127_38064_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1118.0
MMD1_k127_38064_1 Protein of unknown function, DUF255 K06888 - - 2.18e-230 730.0
MMD1_k127_38064_10 4Fe-4S ferredoxin K00124 - - 0.000000000000000000000000000000001371 132.0
MMD1_k127_38064_11 Biopolymer transport protein ExbD/TolR K03560 - - 0.00000000000000000000000000000001726 135.0
MMD1_k127_38064_12 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000001742 134.0
MMD1_k127_38064_13 Outer membrane lipoprotein - - - 0.000000000000000000000004448 113.0
MMD1_k127_38064_14 YtkA-like - - - 0.00000000002648 70.0
MMD1_k127_38064_15 Cell envelope biogenesis protein TolA K03646 - - 0.00005068 55.0
MMD1_k127_38064_2 TIGRFAM molybdenum cofactor synthesis K03750,K07219 - 2.10.1.1 1.988e-223 716.0
MMD1_k127_38064_3 Domain of unknown function (DUF4118) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 367.0
MMD1_k127_38064_4 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009375 360.0
MMD1_k127_38064_5 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000005059 191.0
MMD1_k127_38064_6 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000009436 181.0
MMD1_k127_38064_7 MotA/TolQ/ExbB proton channel family K03561,K03562 - - 0.000000000000000000000000000000000000000000002448 174.0
MMD1_k127_38064_8 methyltransferase - - - 0.00000000000000000000000000000000000000000002258 169.0
MMD1_k127_3814854_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 513.0
MMD1_k127_3814854_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003252 275.0
MMD1_k127_3814854_2 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000002991 138.0
MMD1_k127_3814854_3 PFAM Ankyrin K06867 - - 0.0004464 51.0
MMD1_k127_3842281_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 3.628e-298 927.0
MMD1_k127_3842281_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 1.472e-287 915.0
MMD1_k127_3842281_10 YaeQ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004719 242.0
MMD1_k127_3842281_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001994 245.0
MMD1_k127_3842281_12 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000003116 233.0
MMD1_k127_3842281_13 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000007158 226.0
MMD1_k127_3842281_14 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.0000000000000000000000000000000000000000000000000000000000006103 219.0
MMD1_k127_3842281_15 RibD C-terminal domain K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000000004375 210.0
MMD1_k127_3842281_16 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000001047 202.0
MMD1_k127_3842281_17 methylamine metabolic process K15977 - - 0.00000000000000000000000000000000000000000000000000006339 190.0
MMD1_k127_3842281_18 Activator of Hsp90 ATPase - - - 0.0000000000000000000000000000000000000000000000000002056 191.0
MMD1_k127_3842281_19 methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000009488 188.0
MMD1_k127_3842281_2 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335 - 1.6.5.3 1.62e-252 793.0
MMD1_k127_3842281_20 NADPH-dependent F420 reductase K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000005995 188.0
MMD1_k127_3842281_21 NTPase - - - 0.000000000000000000000000000000000000000000000001325 179.0
MMD1_k127_3842281_22 Cytochrome C biogenesis protein K06196 - - 0.00000000000000000000000000000000000000000000003168 179.0
MMD1_k127_3842281_23 Protein of unknown function (DUF2844) - - - 0.000000000000000000000000000000000000000000001887 170.0
MMD1_k127_3842281_24 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000002394 171.0
MMD1_k127_3842281_25 Glyoxalase-like domain K06996 - - 0.00000000000000000000000000000000000002346 147.0
MMD1_k127_3842281_26 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain - - - 0.00000000000000000000000000000000000003425 153.0
MMD1_k127_3842281_27 Universal stress protein family - - - 0.00000000000000000000000000000000000006203 150.0
MMD1_k127_3842281_28 Stress responsive A/B Barrel Domain - - - 0.00000000000000000000000000000002538 132.0
MMD1_k127_3842281_29 ribonucleoside-diphosphate reductase activity K07735 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000004286 127.0
MMD1_k127_3842281_3 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00123,K00336,K05299,K06441 - 1.12.7.2,1.17.1.10,1.17.1.9,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 458.0
MMD1_k127_3842281_30 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000005579 116.0
MMD1_k127_3842281_31 - - - - 0.000000000000000000000000007672 120.0
MMD1_k127_3842281_32 Protein of unknown function DUF72 - - - 0.00000000000000000000000005918 111.0
MMD1_k127_3842281_34 peptidyl-tyrosine sulfation - - - 0.0000000000000005639 85.0
MMD1_k127_3842281_35 Tetratricopeptide repeat - - - 0.000000000000007939 81.0
MMD1_k127_3842281_36 - - - - 0.000000000000008557 84.0
MMD1_k127_3842281_37 cell redox homeostasis K03671,K03672 - 1.8.1.8 0.00000000000001763 79.0
MMD1_k127_3842281_38 OsmC-like protein K07397 - - 0.0000000004472 65.0
MMD1_k127_3842281_39 Protein of unknown function (DUF1592) - - - 0.000002366 53.0
MMD1_k127_3842281_4 glucose sorbosone K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 447.0
MMD1_k127_3842281_40 - - - - 0.0004352 49.0
MMD1_k127_3842281_5 Protein of unknown function (DUF3443) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 376.0
MMD1_k127_3842281_6 PFAM Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000552 271.0
MMD1_k127_3842281_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008352 269.0
MMD1_k127_3842281_8 Activator of Hsp90 ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002285 268.0
MMD1_k127_3842281_9 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001407 251.0
MMD1_k127_3857519_0 Fructose-1,6-bisphosphatase K01622 - 3.1.3.11,4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 346.0
MMD1_k127_3857519_1 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 297.0
MMD1_k127_3863684_0 Protein involved in outer membrane biogenesis - - - 6.198e-236 764.0
MMD1_k127_3863684_1 Signal transducing histidine kinase, homodimeric K03407 - 2.7.13.3 6.562e-235 746.0
MMD1_k127_3863684_10 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000492 372.0
MMD1_k127_3863684_11 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 334.0
MMD1_k127_3863684_12 PFAM MscS Mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 325.0
MMD1_k127_3863684_13 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 320.0
MMD1_k127_3863684_14 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 298.0
MMD1_k127_3863684_15 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 291.0
MMD1_k127_3863684_16 PBP superfamily domain K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001385 278.0
MMD1_k127_3863684_17 reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003597 277.0
MMD1_k127_3863684_18 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001649 269.0
MMD1_k127_3863684_19 ABC-type dipeptide oligopeptide nickel transport K02034,K15582 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007712 265.0
MMD1_k127_3863684_2 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 599.0
MMD1_k127_3863684_20 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001653 248.0
MMD1_k127_3863684_21 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000001463 244.0
MMD1_k127_3863684_22 YXWGXW repeat (2 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000008182 246.0
MMD1_k127_3863684_23 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000008748 232.0
MMD1_k127_3863684_24 ATPase activity K02010,K02049,K02068,K02071,K06857,K10112 - 3.6.3.30,3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000002916 244.0
MMD1_k127_3863684_25 Histidine kinase K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000007522 233.0
MMD1_k127_3863684_26 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000008171 220.0
MMD1_k127_3863684_27 PFAM SEC-C motif K09858 - - 0.00000000000000000000000000000000000000000000000000000000009715 208.0
MMD1_k127_3863684_28 ubiE/COQ5 methyltransferase family K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000002649 177.0
MMD1_k127_3863684_29 Response regulator receiver domain K03413 - - 0.00000000000000000000000000000000000000000001255 166.0
MMD1_k127_3863684_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 601.0
MMD1_k127_3863684_30 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.000000000000000000000000000000000000000003401 157.0
MMD1_k127_3863684_31 phosphatase activity K05967 - - 0.0000000000000000000000000000000000000005218 155.0
MMD1_k127_3863684_32 Transcriptional regulator - - - 0.0000000000000000000000000000000421 141.0
MMD1_k127_3863684_33 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000004428 128.0
MMD1_k127_3863684_34 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000000000000004852 119.0
MMD1_k127_3863684_35 RNA-binding protein - - - 0.00000000000000000000000000009167 118.0
MMD1_k127_3863684_36 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000005947 109.0
MMD1_k127_3863684_37 AMP binding - - - 0.000000000000000000000007139 106.0
MMD1_k127_3863684_38 - - - - 0.00000000000000000000001981 104.0
MMD1_k127_3863684_39 - - - - 0.00000000000000000002275 99.0
MMD1_k127_3863684_4 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 519.0
MMD1_k127_3863684_40 Pentapeptide repeats (9 copies) - - - 0.00000000000000000002976 99.0
MMD1_k127_3863684_41 SpoIIAA-like - - - 0.000000000000000001218 92.0
MMD1_k127_3863684_42 S4 domain K14761 - - 0.000000000000000004971 87.0
MMD1_k127_3863684_43 structural constituent of ribosome K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000000001542 72.0
MMD1_k127_3863684_44 - - - - 0.000000000004009 75.0
MMD1_k127_3863684_45 - - - - 0.000000000009702 70.0
MMD1_k127_3863684_46 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000005807 70.0
MMD1_k127_3863684_47 STAS domain - - - 0.0000000000957 67.0
MMD1_k127_3863684_48 SNARE associated Golgi protein - - - 0.000000000248 61.0
MMD1_k127_3863684_49 Protein of unknown function (DUF1207) - - - 0.0000006562 60.0
MMD1_k127_3863684_5 histidine kinase HAMP region domain protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003924 442.0
MMD1_k127_3863684_50 signal transduction protein with EFhand domain - - - 0.000001301 51.0
MMD1_k127_3863684_51 response to oxidative stress K03803 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.00004144 52.0
MMD1_k127_3863684_52 Topoisomerase DNA binding C4 zinc finger K07448 - - 0.000238 52.0
MMD1_k127_3863684_53 PFAM UspA domain protein - - - 0.0003238 51.0
MMD1_k127_3863684_54 Universal stress protein family - - - 0.0007477 48.0
MMD1_k127_3863684_6 transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000824 435.0
MMD1_k127_3863684_7 Two component, sigma54 specific, transcriptional regulator, Fis family K02667,K07713,K07714,K19641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005622 415.0
MMD1_k127_3863684_8 PBP superfamily domain K05772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 389.0
MMD1_k127_3863684_9 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 386.0
MMD1_k127_3892420_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.602e-201 640.0
MMD1_k127_3892420_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005299 519.0
MMD1_k127_3892420_10 Ribosomal silencing factor during starvation K09710 GO:0003674,GO:0005488,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113 - 0.000000000000000000000000000005272 123.0
MMD1_k127_3892420_11 Redoxin - - - 0.0000000000000007998 85.0
MMD1_k127_3892420_12 7TM receptor with intracellular HD hydrolase K07037 - - 0.0000000001272 72.0
MMD1_k127_3892420_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 424.0
MMD1_k127_3892420_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 396.0
MMD1_k127_3892420_4 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005285 388.0
MMD1_k127_3892420_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 344.0
MMD1_k127_3892420_6 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000005897 217.0
MMD1_k127_3892420_7 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000005436 191.0
MMD1_k127_3892420_8 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000000000000000001694 134.0
MMD1_k127_3892420_9 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000363 129.0
MMD1_k127_3902246_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 8.415e-206 647.0
MMD1_k127_3902246_1 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009569 611.0
MMD1_k127_3902246_2 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 374.0
MMD1_k127_3902246_3 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 321.0
MMD1_k127_3902246_4 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000001417 212.0
MMD1_k127_3902246_5 peptidyl-tyrosine sulfation - - - 0.0000000000002072 74.0
MMD1_k127_3903645_0 cysteine protease - - - 2.027e-252 794.0
MMD1_k127_3903645_1 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000579 287.0
MMD1_k127_3903645_2 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002144 274.0
MMD1_k127_3903645_4 - - - - 0.0000000000000000000000000000000000003916 147.0
MMD1_k127_3903645_5 Tetratricopeptide repeat - - - 0.0000000000000000000005428 105.0
MMD1_k127_3903645_6 Papain-like cysteine protease AvrRpt2 - - - 0.00000000005553 64.0
MMD1_k127_3906943_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 469.0
MMD1_k127_3906943_1 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 413.0
MMD1_k127_3908282_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 564.0
MMD1_k127_3908282_1 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009242 433.0
MMD1_k127_3908282_10 Protein of unknown function (DUF3047) - - - 0.00000000000000000000000000000000000000000000001732 180.0
MMD1_k127_3908282_11 PFAM Peptidase M23 - - - 0.0000000000000000000000000000000000000000000005346 177.0
MMD1_k127_3908282_12 Cobalamin-5-phosphate synthase K02233 - 2.7.8.26 0.00000000000000000000000000000000000000009463 160.0
MMD1_k127_3908282_13 Bacterial protein of unknown function (DUF922) - - - 0.000000000000000000007752 101.0
MMD1_k127_3908282_14 acetyltransferase - - - 0.0000000000000002294 84.0
MMD1_k127_3908282_15 thiamine biosynthesis protein ThiS K03154 - - 0.00000000000002961 74.0
MMD1_k127_3908282_16 - - - - 0.00000001221 61.0
MMD1_k127_3908282_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 407.0
MMD1_k127_3908282_3 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 320.0
MMD1_k127_3908282_4 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989,K02428 - 2.7.7.56,3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006242 310.0
MMD1_k127_3908282_5 Uncharacterized protein family UPF0016 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 292.0
MMD1_k127_3908282_6 Phosphomethylpyrimidine kinase K00868,K00941,K14153 - 2.5.1.3,2.7.1.35,2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000008415 241.0
MMD1_k127_3908282_7 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.000000000000000000000000000000000000000000000000000000008236 205.0
MMD1_k127_3908282_8 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.0000000000000000000000000000000000000000000000000000000294 202.0
MMD1_k127_3908282_9 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000000000000000000000000000001033 178.0
MMD1_k127_3939139_0 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 604.0
MMD1_k127_3939139_1 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 589.0
MMD1_k127_3939139_10 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000003206 198.0
MMD1_k127_3939139_11 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000001085 186.0
MMD1_k127_3939139_12 Molybdopterin-guanine dinucleotide biosynthesis K03753 - - 0.0000000000000000000000000000000001116 140.0
MMD1_k127_3939139_13 NapC/NirT cytochrome c family, N-terminal region - - - 0.00000000000000000000000000000006899 138.0
MMD1_k127_3939139_14 PFAM Rieske 2Fe-2S K02636 - 1.10.9.1 0.0000000000000000000000000000001605 130.0
MMD1_k127_3939139_15 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.000000000000000008646 87.0
MMD1_k127_3939139_16 Cytochrome c7 and related cytochrome c - - - 0.00000000000000881 77.0
MMD1_k127_3939139_17 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.00000000000002105 75.0
MMD1_k127_3939139_2 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 527.0
MMD1_k127_3939139_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 435.0
MMD1_k127_3939139_4 PFAM 4Fe-4S K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009097 430.0
MMD1_k127_3939139_5 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 356.0
MMD1_k127_3939139_6 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 354.0
MMD1_k127_3939139_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.00000000000000000000000000000000000000000000000000000000000000000000000004259 260.0
MMD1_k127_3939139_8 Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit - - - 0.000000000000000000000000000000000000000000000000000000000003654 220.0
MMD1_k127_3939139_9 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000003676 211.0
MMD1_k127_3947762_0 pfam abc1 K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 366.0
MMD1_k127_3947762_1 Phosphonate ABC transporter, periplasmic K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008598 352.0
MMD1_k127_3947762_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001165 285.0
MMD1_k127_3947762_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000002696 184.0
MMD1_k127_3947762_4 transcription factor binding - - - 0.0000000000000000000003476 111.0
MMD1_k127_395507_0 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 445.0
MMD1_k127_395507_1 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.00000000000000000000000000000000000000000000000000000000000001117 224.0
MMD1_k127_395507_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000002982 205.0
MMD1_k127_39559_0 nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC K02567 - - 0.0 1444.0
MMD1_k127_39559_1 TIGRFAM MauM NapG family ferredoxin-type protein K02573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 324.0
MMD1_k127_39559_2 4Fe-4S binding domain K02574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 323.0
MMD1_k127_39559_3 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000002545 95.0
MMD1_k127_39559_4 Poly A polymerase head domain K00970 - 2.7.7.19 0.0000001829 55.0
MMD1_k127_3992174_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 466.0
MMD1_k127_3992174_1 Mitochondrial small ribosomal subunit Rsm22 - - - 0.0000000000000000000000000000000000000000000000000000000000003161 225.0
MMD1_k127_3992174_2 PFAM V-type ATPase 116 kDa K02123 - - 0.0000000000000000000000000000003882 123.0
MMD1_k127_3992747_0 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 425.0
MMD1_k127_3992747_1 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007516 412.0
MMD1_k127_3992747_2 NADPH:quinone reductase activity K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 406.0
MMD1_k127_3992747_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 334.0
MMD1_k127_3992747_4 - - - - 0.000000000000000000000000000000000000000001191 171.0
MMD1_k127_3992747_5 CHRD domain - - - 0.00000000000000000000000000000000002625 140.0
MMD1_k127_3992747_6 Putative transmembrane protein (Alph_Pro_TM) - - - 0.0000088 57.0
MMD1_k127_4000487_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 2.915e-251 781.0
MMD1_k127_4000487_1 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.00000000000000000000000000000000000000000000000000000000000006866 220.0
MMD1_k127_4000487_2 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000001201 213.0
MMD1_k127_4009828_0 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes K06132 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 330.0
MMD1_k127_4009828_1 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 310.0
MMD1_k127_4036888_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 572.0
MMD1_k127_4036888_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 462.0
MMD1_k127_4036888_2 Tim44 K02117,K08678,K11646,K15539,K17835,K21636 - 1.1.98.6,1.4.1.24,3.6.3.14,3.6.3.15,4.1.1.35,4.1.99.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 421.0
MMD1_k127_4036888_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 391.0
MMD1_k127_4036888_4 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000003452 252.0
MMD1_k127_4036888_5 Belongs to the ompA family K12216 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006139 247.0
MMD1_k127_4036888_6 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides - - - 0.0000000000000000000000000000000000000000000000000000000000000001492 231.0
MMD1_k127_4036888_7 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000202 213.0
MMD1_k127_4040478_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299 - 1.17.1.10,1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 351.0
MMD1_k127_4040478_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 333.0
MMD1_k127_4040478_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000001531 147.0
MMD1_k127_4040478_3 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000001029 136.0
MMD1_k127_4040478_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000004474 59.0
MMD1_k127_4042803_0 DEAD DEAH box helicase K03724 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 304.0
MMD1_k127_4042803_1 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 293.0
MMD1_k127_4042803_2 nucleotidyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000002573 197.0
MMD1_k127_4042803_3 TPM domain K06872 - - 0.000002141 53.0
MMD1_k127_4086276_0 Anthranilate synthase component I K01657,K01665,K03342,K13950 - 2.6.1.85,4.1.3.27,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 350.0
MMD1_k127_4086276_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000006887 224.0
MMD1_k127_4086276_2 AAA domain - - - 0.0000002518 64.0
MMD1_k127_4086276_3 FAD binding domain K05712 - 1.14.13.127 0.0003713 50.0
MMD1_k127_413957_0 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 410.0
MMD1_k127_413957_1 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009208 385.0
MMD1_k127_413957_2 Diguanylate cyclase - - - 0.00000000000000000000000000003906 124.0
MMD1_k127_4178955_0 Conserved hypothetical protein 698 - - - 7.152e-212 669.0
MMD1_k127_4178955_1 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566 470.0
MMD1_k127_4178955_2 PFAM Integral membrane protein TerC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001265 266.0
MMD1_k127_4178955_3 amine dehydrogenase activity K13730 - - 0.000003882 58.0
MMD1_k127_4264578_0 fibronectin type III domain protein K06882 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 647.0
MMD1_k127_4264578_1 Major Facilitator Superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 519.0
MMD1_k127_4264578_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000666 66.0
MMD1_k127_4264578_3 PA14 - - - 0.00000004209 66.0
MMD1_k127_426462_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.216e-229 726.0
MMD1_k127_426462_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 285.0
MMD1_k127_426462_2 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000002511 167.0
MMD1_k127_4288882_0 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 477.0
MMD1_k127_4288882_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000008314 229.0
MMD1_k127_430270_0 Nucleotidyl transferase - - - 1.316e-232 732.0
MMD1_k127_430270_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006472 339.0
MMD1_k127_430270_2 Class II aldolase adducin family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007448 264.0
MMD1_k127_430270_3 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000000000000000000000000007661 115.0
MMD1_k127_430270_4 GtrA-like protein - - - 0.0000000000000000000005805 107.0
MMD1_k127_4323933_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 391.0
MMD1_k127_4323933_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 327.0
MMD1_k127_4323933_2 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000006904 224.0
MMD1_k127_4323933_3 Forms part of the polypeptide exit tunnel K02926 - - 0.000000000000000000000000000000000000000000000000000000000003006 214.0
MMD1_k127_4323933_4 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000009115 147.0
MMD1_k127_4323933_5 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000001688 121.0
MMD1_k127_4323933_6 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000248 119.0
MMD1_k127_4323933_7 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000005958 74.0
MMD1_k127_4323933_8 Ribosomal protein L3 K02906 - - 0.000000002561 58.0
MMD1_k127_4329662_0 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02481,K11384 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 422.0
MMD1_k127_4329662_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000006953 253.0
MMD1_k127_4329662_2 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000002922 247.0
MMD1_k127_4329662_3 Cytochrome c - - - 0.0000000000000000000000000003337 117.0
MMD1_k127_4369602_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 593.0
MMD1_k127_4369602_1 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 369.0
MMD1_k127_4369602_10 - - - - 0.00001668 54.0
MMD1_k127_4369602_2 galactose-1-phosphate uridylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 352.0
MMD1_k127_4369602_3 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 345.0
MMD1_k127_4369602_4 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 300.0
MMD1_k127_4369602_5 metal-dependent phosphohydrolase HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006919 300.0
MMD1_k127_4369602_6 membrane organization K20543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003048 259.0
MMD1_k127_4369602_7 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000001816 211.0
MMD1_k127_4369602_8 CGGC - - - 0.00000000000000000000000000000000000000000000000000000002379 200.0
MMD1_k127_4369602_9 translation initiation factor activity K03646 - - 0.00001217 55.0
MMD1_k127_4380408_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261,K00262 - 1.4.1.2,1.4.1.3,1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 384.0
MMD1_k127_4405131_0 Aminotransferase class I and II K14261 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 556.0
MMD1_k127_4405131_1 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 377.0
MMD1_k127_4405131_2 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000001427 121.0
MMD1_k127_4407615_0 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002667 276.0
MMD1_k127_4407615_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00009255 51.0
MMD1_k127_4407615_3 SNARE associated Golgi protein - - - 0.000158 44.0
MMD1_k127_4407859_0 7TM-HD extracellular K07037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 388.0
MMD1_k127_4407859_1 Prokaryotic diacylglycerol kinase K00901 - 2.7.1.107 0.00000000000000000000000000000000000000000000000000479 194.0
MMD1_k127_4407859_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000002659 108.0
MMD1_k127_4407859_3 Roadblock/LC7 domain - - - 0.000000000006308 70.0
MMD1_k127_4412939_0 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 409.0
MMD1_k127_4412939_1 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000001531 56.0
MMD1_k127_4419333_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 321.0
MMD1_k127_4419333_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000008314 239.0
MMD1_k127_4419333_3 MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000002056 191.0
MMD1_k127_4419333_4 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000001516 175.0
MMD1_k127_4419333_5 membrane K00389 - - 0.0000000000000000000000000000000000000000002087 162.0
MMD1_k127_4419333_6 - - - - 0.00000000000000001681 93.0
MMD1_k127_4435465_0 C-terminal, D2-small domain, of ClpB protein K03696 - - 0.0 1136.0
MMD1_k127_4435465_1 DNA polymerase A domain K02335 - 2.7.7.7 6.66e-308 968.0
MMD1_k127_4435465_10 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004131 546.0
MMD1_k127_4435465_11 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 569.0
MMD1_k127_4435465_12 phosphorelay signal transduction system K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 541.0
MMD1_k127_4435465_13 Part of a membrane complex involved in electron transport K03615 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 518.0
MMD1_k127_4435465_14 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 534.0
MMD1_k127_4435465_15 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 484.0
MMD1_k127_4435465_16 PFAM natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009399 458.0
MMD1_k127_4435465_17 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 426.0
MMD1_k127_4435465_18 MgtE intracellular N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 411.0
MMD1_k127_4435465_19 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008271 391.0
MMD1_k127_4435465_2 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 3.439e-248 784.0
MMD1_k127_4435465_20 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004623 392.0
MMD1_k127_4435465_21 Type II secretion system (T2SS), protein F K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 383.0
MMD1_k127_4435465_22 Fe-S oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007978 381.0
MMD1_k127_4435465_23 Receptor family ligand binding region K01999 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0008150,GO:0015711,GO:0015803,GO:0015804,GO:0015818,GO:0015820,GO:0015829,GO:0015849,GO:0016597,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046942,GO:0051179,GO:0051234,GO:0070728,GO:0071702,GO:0071705 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008327 378.0
MMD1_k127_4435465_24 MacB-like periplasmic core domain K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 379.0
MMD1_k127_4435465_25 Putative modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 379.0
MMD1_k127_4435465_26 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007058 378.0
MMD1_k127_4435465_27 Branched-chain amino acid transport system / permease component K01997 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0043090,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098713,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 360.0
MMD1_k127_4435465_28 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007044 348.0
MMD1_k127_4435465_29 CBS domain containing protein K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 351.0
MMD1_k127_4435465_3 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 6.364e-248 791.0
MMD1_k127_4435465_30 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 337.0
MMD1_k127_4435465_31 electron transport complex, RnfABCDGE type, B subunit K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 337.0
MMD1_k127_4435465_32 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 319.0
MMD1_k127_4435465_33 PFAM glycosyl transferase, family 9 K02841 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 306.0
MMD1_k127_4435465_34 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 314.0
MMD1_k127_4435465_35 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 306.0
MMD1_k127_4435465_36 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006937 290.0
MMD1_k127_4435465_37 MazG family K02428,K02499 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009518 288.0
MMD1_k127_4435465_38 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008209 285.0
MMD1_k127_4435465_39 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004853 273.0
MMD1_k127_4435465_4 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 3.658e-202 646.0
MMD1_k127_4435465_40 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000003025 266.0
MMD1_k127_4435465_41 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001914 266.0
MMD1_k127_4435465_42 PFAM phosphoesterase, RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000001983 266.0
MMD1_k127_4435465_43 6-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006359 249.0
MMD1_k127_4435465_44 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000000000000000000000000000000000000000000000000000000001961 238.0
MMD1_k127_4435465_45 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0031119,GO:0034337,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000001966 243.0
MMD1_k127_4435465_46 Domain of unknown function (DUF1732) - - - 0.000000000000000000000000000000000000000000000000000000000000000002528 237.0
MMD1_k127_4435465_47 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000254 256.0
MMD1_k127_4435465_48 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000000000000003546 244.0
MMD1_k127_4435465_49 Part of a membrane complex involved in electron transport K03613 - - 0.000000000000000000000000000000000000000000000000000000000000002953 223.0
MMD1_k127_4435465_5 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 6.085e-202 639.0
MMD1_k127_4435465_50 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000002874 218.0
MMD1_k127_4435465_51 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000002326 214.0
MMD1_k127_4435465_52 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000005879 202.0
MMD1_k127_4435465_53 helix_turn_helix, cAMP Regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000004873 204.0
MMD1_k127_4435465_54 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000002606 200.0
MMD1_k127_4435465_55 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000005419 181.0
MMD1_k127_4435465_56 Acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571,K01960 - 4.1.1.3,6.4.1.1 0.000000000000000000000000000000000000000000007763 169.0
MMD1_k127_4435465_57 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000007085 168.0
MMD1_k127_4435465_58 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000008407 160.0
MMD1_k127_4435465_59 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000007344 156.0
MMD1_k127_4435465_6 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 2.432e-194 617.0
MMD1_k127_4435465_60 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.00000000000000000000000000000000000000002247 153.0
MMD1_k127_4435465_61 denitrification pathway - - - 0.0000000000000000000000000000000000000005845 156.0
MMD1_k127_4435465_62 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000004145 141.0
MMD1_k127_4435465_63 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000005032 138.0
MMD1_k127_4435465_64 GTP-binding protein LepA C-terminus K03596 - - 0.0000000000000000000000000000000007204 130.0
MMD1_k127_4435465_65 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000001262 135.0
MMD1_k127_4435465_66 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41 0.0000000000000000000000000000000159 133.0
MMD1_k127_4435465_67 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000001575 124.0
MMD1_k127_4435465_68 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000009651 129.0
MMD1_k127_4435465_69 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000001051 118.0
MMD1_k127_4435465_7 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 604.0
MMD1_k127_4435465_70 Smr domain - - - 0.000000000000000000000000001142 121.0
MMD1_k127_4435465_71 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000008755 113.0
MMD1_k127_4435465_72 - - - - 0.00000000000000000000000001101 116.0
MMD1_k127_4435465_73 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000000000003018 112.0
MMD1_k127_4435465_74 Roadblock/LC7 domain - - - 0.000000000000000000000000115 112.0
MMD1_k127_4435465_75 NifU-like domain - - - 0.000000000000000000000039 109.0
MMD1_k127_4435465_76 ribosomal protein L7Ae L30e S12e Gadd45 K07742 - - 0.0000000000000000000003361 104.0
MMD1_k127_4435465_77 Uncharacterized ACR, COG1993 K09137 - - 0.000000000000000000001686 99.0
MMD1_k127_4435465_78 Domain of unknown function (DUF1858) - - - 0.000000000000000004181 87.0
MMD1_k127_4435465_79 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000008824 90.0
MMD1_k127_4435465_8 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 603.0
MMD1_k127_4435465_80 - - - - 0.00000000000000001032 88.0
MMD1_k127_4435465_81 belongs to the thioredoxin family K14949,K20543 - 2.7.11.1 0.00000000000000006955 94.0
MMD1_k127_4435465_82 peptidyl-tyrosine sulfation - - - 0.0000000000000003966 86.0
MMD1_k127_4435465_83 sodium-dependent phosphate transmembrane transporter activity K14683 - - 0.000000000005954 74.0
MMD1_k127_4435465_84 - - - - 0.000000000478 66.0
MMD1_k127_4435465_85 Outer membrane protein (OmpH-like) K06142 - - 0.000000007829 64.0
MMD1_k127_4435465_86 Late competence development protein ComFB K02241 - - 0.00000001294 60.0
MMD1_k127_4435465_87 Flavin containing amine oxidoreductase - - - 0.00000005297 65.0
MMD1_k127_4435465_88 amine dehydrogenase activity - - - 0.0000001139 64.0
MMD1_k127_4435465_89 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000008623 56.0
MMD1_k127_4435465_9 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 572.0
MMD1_k127_4435465_90 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000004404 50.0
MMD1_k127_4435465_91 Recombinase - - - 0.00025 45.0
MMD1_k127_4456347_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 7.243e-215 689.0
MMD1_k127_4456347_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004773 400.0
MMD1_k127_4456347_2 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 350.0
MMD1_k127_4456347_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 338.0
MMD1_k127_4456347_4 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002021 284.0
MMD1_k127_4456347_5 Aldo keto - - - 0.000000003651 59.0
MMD1_k127_4461532_0 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 481.0
MMD1_k127_4461532_1 Methylpurine-DNA glycosylase (MPG) K03652 GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 0.00000000000000000000000000008382 118.0
MMD1_k127_4461532_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000008377 106.0
MMD1_k127_4461532_3 AAA domain K07028 - - 0.000001907 53.0
MMD1_k127_4463367_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1217.0
MMD1_k127_4463367_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.951e-277 868.0
MMD1_k127_4463367_10 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008584 334.0
MMD1_k127_4463367_11 4Fe-4S dicluster domain K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004761 269.0
MMD1_k127_4463367_12 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000001654 261.0
MMD1_k127_4463367_13 Hydrolyzes mannosyl-3-phosphoglycerate (MPG) to form the osmolyte mannosylglycerate (MG) K07026 - 3.1.3.70 0.000000000000000000000000000000000000000000000000002732 192.0
MMD1_k127_4463367_14 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000006658 163.0
MMD1_k127_4463367_15 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000005684 151.0
MMD1_k127_4463367_16 Domain of unknown function (DUF4912) K09942 - - 0.0000000000000000000000000000000002603 144.0
MMD1_k127_4463367_17 transmembrane transport - - - 0.00000000000000000000000000002145 126.0
MMD1_k127_4463367_18 Protein of unknown function, DUF485 - - - 0.0000000000000000000000000006682 116.0
MMD1_k127_4463367_19 PFAM Polysulphide reductase, NrfD - - - 0.000000000000000000000000409 108.0
MMD1_k127_4463367_2 Domain in cystathionine beta-synthase and other proteins. K07182 - - 9.558e-251 789.0
MMD1_k127_4463367_3 Domain of unknown function (DUF1957) K16149 - 2.4.1.18 2.535e-246 773.0
MMD1_k127_4463367_4 glycolate transport K14393 - - 2.224e-218 693.0
MMD1_k127_4463367_5 glycosyl transferase family 2 K21349 - 2.4.1.268 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 527.0
MMD1_k127_4463367_6 FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 522.0
MMD1_k127_4463367_7 transferase activity, transferring glycosyl groups K13693 - 2.4.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 514.0
MMD1_k127_4463367_8 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005539 488.0
MMD1_k127_4463367_9 hydroxypyruvate reductase K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 470.0
MMD1_k127_4463401_0 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000001092 230.0
MMD1_k127_4463401_1 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000006539 224.0
MMD1_k127_4463401_2 denitrification pathway - - - 0.000000000000000000000000000000000000000000000964 171.0
MMD1_k127_4463401_3 TPM domain - - - 0.000000000000000000000000000000000002381 145.0
MMD1_k127_4498173_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1776.0
MMD1_k127_4498173_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1076.0
MMD1_k127_4498173_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000002222 230.0
MMD1_k127_4498173_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000002135 220.0
MMD1_k127_4498173_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000003348 81.0
MMD1_k127_4498958_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.069e-251 785.0
MMD1_k127_4498958_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 594.0
MMD1_k127_4498958_10 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007533 322.0
MMD1_k127_4498958_11 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009576 313.0
MMD1_k127_4498958_12 RmlD substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 305.0
MMD1_k127_4498958_13 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000841 257.0
MMD1_k127_4498958_14 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001526 248.0
MMD1_k127_4498958_15 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000007597 193.0
MMD1_k127_4498958_16 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000001794 181.0
MMD1_k127_4498958_17 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000001615 187.0
MMD1_k127_4498958_18 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000001837 172.0
MMD1_k127_4498958_19 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000004339 159.0
MMD1_k127_4498958_2 PFAM NAD-dependent epimerase dehydratase K08678 - 4.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 504.0
MMD1_k127_4498958_20 electron transfer activity K05337,K17247 - - 0.000000000000000000002595 95.0
MMD1_k127_4498958_21 Cytochrome c - - - 0.000000002726 63.0
MMD1_k127_4498958_3 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006313 494.0
MMD1_k127_4498958_4 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 442.0
MMD1_k127_4498958_5 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 443.0
MMD1_k127_4498958_6 SIS domain K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 398.0
MMD1_k127_4498958_7 PFAM DAHP synthetase I KDSA K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004653 391.0
MMD1_k127_4498958_8 Glycosyltransferase family 9 (heptosyltransferase) K02843,K02849 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 364.0
MMD1_k127_4498958_9 SMART Elongator protein 3 MiaB NifB K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 342.0
MMD1_k127_4502802_0 Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 530.0
MMD1_k127_4502802_1 Kinase suppressor of Ras 1 K14958,K18529 GO:0000003,GO:0000165,GO:0000578,GO:0001708,GO:0001932,GO:0001934,GO:0002009,GO:0002119,GO:0002164,GO:0002165,GO:0002252,GO:0002376,GO:0003002,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0005078,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005829,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006950,GO:0006952,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007264,GO:0007265,GO:0007275,GO:0007350,GO:0007351,GO:0007389,GO:0007424,GO:0007426,GO:0007444,GO:0007472,GO:0007476,GO:0007548,GO:0007552,GO:0007560,GO:0008022,GO:0008150,GO:0008152,GO:0008293,GO:0008595,GO:0009605,GO:0009607,GO:0009615,GO:0009617,GO:0009653,GO:0009790,GO:0009791,GO:0009798,GO:0009880,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009893,GO:0009948,GO:0009952,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0012505,GO:0014812,GO:0016020,GO:0016301,GO:0016310,GO:0016477,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0019933,GO:0019935,GO:0022414,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0031072,GO:0031323,GO:0031325,GO:0031326,GO:0031399,GO:0031401,GO:0031434,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032947,GO:0032991,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035282,GO:0035295,GO:0035556,GO:0035591,GO:0036211,GO:0040011,GO:0040025,GO:0040026,GO:0040028,GO:0042127,GO:0042325,GO:0042327,GO:0042742,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043405,GO:0043408,GO:0043410,GO:0043412,GO:0043549,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045138,GO:0045165,GO:0045859,GO:0045937,GO:0046578,GO:0046579,GO:0046661,GO:0048513,GO:0048518,GO:0048522,GO:0048563,GO:0048569,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050830,GO:0050896,GO:0051056,GO:0051057,GO:0051087,GO:0051094,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051321,GO:0051338,GO:0051451,GO:0051607,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0051879,GO:0060090,GO:0060255,GO:0060429,GO:0060541,GO:0060562,GO:0061062,GO:0061063,GO:0065007,GO:0065009,GO:0071704,GO:0071889,GO:0071900,GO:0080090,GO:0090598,GO:0098542,GO:0140096,GO:1901564,GO:1902531,GO:1902533,GO:1903506,GO:2000026,GO:2000112,GO:2001141 2.7.11.1 0.0008077 46.0
MMD1_k127_4505898_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007897 561.0
MMD1_k127_4505898_1 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 532.0
MMD1_k127_4505898_10 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00171,K00172 - 1.2.7.1 0.00000000000000000000000000000000000000007408 156.0
MMD1_k127_4505898_11 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000003434 130.0
MMD1_k127_4505898_12 Uncharacterized protein conserved in bacteria (DUF2155) - - - 0.0000000000000000000000000000001831 133.0
MMD1_k127_4505898_13 peptidyl-tyrosine sulfation - - - 0.00000000001187 74.0
MMD1_k127_4505898_14 PFAM Excinuclease ABC, C subunit domain protein K07461 - - 0.000000006634 59.0
MMD1_k127_4505898_16 Recombinase zinc beta ribbon domain - - - 0.0001697 46.0
MMD1_k127_4505898_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00170 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000788 441.0
MMD1_k127_4505898_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 427.0
MMD1_k127_4505898_4 ADP-ribosylation factor family K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 352.0
MMD1_k127_4505898_5 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 298.0
MMD1_k127_4505898_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001055 249.0
MMD1_k127_4505898_7 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000001693 239.0
MMD1_k127_4505898_8 PFAM Roadblock LC7 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000001778 219.0
MMD1_k127_4505898_9 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000002285 191.0
MMD1_k127_4506692_0 Extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 578.0
MMD1_k127_4506692_1 PFAM V-type ATPase 116 kDa K02123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006848 453.0
MMD1_k127_4506692_2 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 395.0
MMD1_k127_4506692_3 GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 411.0
MMD1_k127_4506692_4 ABC transporter (Permease K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 357.0
MMD1_k127_4506692_5 ABC transporter permease K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009095 325.0
MMD1_k127_4506692_6 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002377 256.0
MMD1_k127_4506692_7 Cupin domain - - - 0.00000000000000000000000000000000000000000000000004451 180.0
MMD1_k127_4506692_8 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.0000000000000000001368 98.0
MMD1_k127_4535839_0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 9.157e-231 732.0
MMD1_k127_4535839_1 Proton-conducting membrane transporter K00342 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1902600,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 583.0
MMD1_k127_4535839_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000000002594 126.0
MMD1_k127_4538947_0 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 617.0
MMD1_k127_4538947_1 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 554.0
MMD1_k127_4538947_10 PFAM transglutaminase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000004345 241.0
MMD1_k127_4538947_11 - - - - 0.0000000000000135 79.0
MMD1_k127_4538947_12 - - - - 0.00000000003851 73.0
MMD1_k127_4538947_13 Dipeptidyl peptidase IV (DPP IV) N-terminal region K03641 - - 0.0000001257 63.0
MMD1_k127_4538947_14 - - - - 0.0000001353 59.0
MMD1_k127_4538947_16 Bacterial membrane protein, YfhO - - - 0.0002072 55.0
MMD1_k127_4538947_2 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 497.0
MMD1_k127_4538947_3 PFAM NDP-hexose 23-dehydratase K16435 - 4.2.1.159 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 496.0
MMD1_k127_4538947_4 Bacterial Ig-like domain 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 467.0
MMD1_k127_4538947_5 Putative ATP-binding cassette K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006554 414.0
MMD1_k127_4538947_6 Glycosyltransferase like family 2 K10012 - 2.4.2.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 379.0
MMD1_k127_4538947_7 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 314.0
MMD1_k127_4538947_8 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006101 260.0
MMD1_k127_4538947_9 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000005101 252.0
MMD1_k127_4558532_0 CBS domain containing protein K00974 - 2.7.7.72 2.207e-263 837.0
MMD1_k127_4558532_1 TIGRFAM Na Pi-cotransporter II-related protein K03324 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009057 349.0
MMD1_k127_4558532_10 Prokaryotic N-terminal methylation motif - - - 0.00000000001137 71.0
MMD1_k127_4558532_11 - - - - 0.0000000002361 70.0
MMD1_k127_4558532_2 integrase domain protein SAM domain protein K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 332.0
MMD1_k127_4558532_3 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008542 245.0
MMD1_k127_4558532_4 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000000000000000000000000000000000000000000000000008041 238.0
MMD1_k127_4558532_5 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000005538 198.0
MMD1_k127_4558532_6 self proteolysis - - - 0.0000000000000000000000000000001647 137.0
MMD1_k127_4558532_7 self proteolysis - - - 0.000000000000000000000000006548 122.0
MMD1_k127_4558532_9 helix_turn_helix, Lux Regulon - - - 0.00000000000000006905 89.0
MMD1_k127_4588698_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1030.0
MMD1_k127_4588698_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 3.281e-296 932.0
MMD1_k127_4588698_10 HD domain K07023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003723 276.0
MMD1_k127_4588698_11 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001931 256.0
MMD1_k127_4588698_12 adenylate kinase activity K00939,K01939 - 2.7.4.3,6.3.4.4 0.000000000000000000000000000000000000000000003044 173.0
MMD1_k127_4588698_13 Phosphoribosyl-AMP cyclohydrolase K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000008459 160.0
MMD1_k127_4588698_14 polynucleotide 5'-hydroxyl-kinase activity K06947 - - 0.000000000000000000000000000000000000000009714 168.0
MMD1_k127_4588698_15 HIT domain K02503 - - 0.00000000000000000000000000000000000000001009 157.0
MMD1_k127_4588698_16 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000004461 138.0
MMD1_k127_4588698_17 Belongs to the Nudix hydrolase family - - - 0.00000000000000000000000000006634 124.0
MMD1_k127_4588698_18 Polymer-forming cytoskeletal - - - 0.00000000000000000000000001179 115.0
MMD1_k127_4588698_19 GIY-YIG catalytic domain protein K07461 - - 0.00000000000000000001614 93.0
MMD1_k127_4588698_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 2.779e-249 784.0
MMD1_k127_4588698_20 - K06039,K07092 - - 0.000000177 58.0
MMD1_k127_4588698_3 Belongs to the GPI family K01810 - 5.3.1.9 1.306e-206 660.0
MMD1_k127_4588698_4 DNA topoisomerase II activity K02469 - 5.99.1.3 9.639e-198 626.0
MMD1_k127_4588698_5 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 443.0
MMD1_k127_4588698_6 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002794 438.0
MMD1_k127_4588698_7 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 396.0
MMD1_k127_4588698_8 Cellulose biosynthesis protein BcsQ K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 327.0
MMD1_k127_4588698_9 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005249 327.0
MMD1_k127_4604523_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 7.637e-246 772.0
MMD1_k127_4604523_1 phosphorelay signal transduction system K02584,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 474.0
MMD1_k127_4604523_10 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000000000000000000005107 116.0
MMD1_k127_4604523_11 SMART Cold shock protein K03704 - - 0.0000000000000000000000001738 106.0
MMD1_k127_4604523_12 membrane transporter protein K07090 - - 0.0000000000000000000000001846 112.0
MMD1_k127_4604523_13 - - - - 0.000000000001769 74.0
MMD1_k127_4604523_14 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000005384 63.0
MMD1_k127_4604523_15 Tetratricopeptide repeat - - - 0.00004945 55.0
MMD1_k127_4604523_2 radical SAM domain protein K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 391.0
MMD1_k127_4604523_3 Memo-like protein K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005542 342.0
MMD1_k127_4604523_4 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000156 268.0
MMD1_k127_4604523_5 Universal stress protein family K07090 - - 0.00000000000000000000000000000000000000000000000000000004091 208.0
MMD1_k127_4604523_6 PFAM amino acid-binding ACT domain protein - - - 0.00000000000000000000000000000000000000000000005771 177.0
MMD1_k127_4604523_7 PFAM FMN-binding domain - - - 0.0000000000000000000000000000000000000004968 164.0
MMD1_k127_4604523_8 DNA-binding transcription factor activity K03710 - - 0.000000000000000000000000000000001004 139.0
MMD1_k127_4604523_9 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000001143 120.0
MMD1_k127_4642543_0 Ftsk_gamma K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 606.0
MMD1_k127_4642543_1 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 538.0
MMD1_k127_4642543_10 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000001868 117.0
MMD1_k127_4642543_11 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000001548 77.0
MMD1_k127_4642543_12 - - - - 0.000000000003194 73.0
MMD1_k127_4642543_2 Pfam:Arch_ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000419 282.0
MMD1_k127_4642543_3 anaerobic electron transport chain - GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0019645,GO:0022900,GO:0022904,GO:0044237,GO:0045333,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000008457 269.0
MMD1_k127_4642543_4 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000000000000000000008048 231.0
MMD1_k127_4642543_5 regulator, PATAN and FRGAF domain-containing - - - 0.000000000000000000000000000000000000000000000000000000000000000004971 241.0
MMD1_k127_4642543_6 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000001 233.0
MMD1_k127_4642543_7 MOSC domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002419 231.0
MMD1_k127_4642543_8 cytochrome C - - - 0.000000000000000000000000000000000000000000000002235 180.0
MMD1_k127_4642543_9 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000001801 147.0
MMD1_k127_4664715_0 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 493.0
MMD1_k127_468858_0 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 458.0
MMD1_k127_468858_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 408.0
MMD1_k127_468858_2 PHP domain protein K07053 - 3.1.3.97 0.000000000000000000000000000000000000000002622 155.0
MMD1_k127_468858_3 cheY-homologous receiver domain - - - 0.0000000000000000000000000159 115.0
MMD1_k127_4693545_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 1.757e-301 932.0
MMD1_k127_4693545_1 PFAM MltA K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 326.0
MMD1_k127_4693545_2 PFAM MgtC SapB transporter K07507 - - 0.00000000000000000000000000000000000000000000000000000000000000000299 233.0
MMD1_k127_4693545_3 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000008589 224.0
MMD1_k127_4694685_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K13378 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007003 539.0
MMD1_k127_4694685_1 membrane protein, terc K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 376.0
MMD1_k127_4694685_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005969 327.0
MMD1_k127_4694685_3 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 292.0
MMD1_k127_4694685_4 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005822 255.0
MMD1_k127_4694685_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.000000000000000000000000000000000000000000006078 169.0
MMD1_k127_4702978_0 PFAM binding-protein-dependent transport systems inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007781 399.0
MMD1_k127_4702978_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009069 390.0
MMD1_k127_4702978_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003772 261.0
MMD1_k127_4702978_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000007041 204.0
MMD1_k127_4710993_0 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 608.0
MMD1_k127_4710993_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002829 277.0
MMD1_k127_4710993_2 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001541 277.0
MMD1_k127_4710993_3 - - - - 0.00002137 56.0
MMD1_k127_4724277_0 UvrD REP helicase K03657,K16898 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003437 308.0
MMD1_k127_4769908_0 PFAM Radical SAM - - - 5.139e-211 667.0
MMD1_k127_4769908_1 PFAM peptidase M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 501.0
MMD1_k127_4769908_10 C-terminal binding-module, SLH-like, of glucodextranase - - - 0.00001932 58.0
MMD1_k127_4769908_11 - - - - 0.00002064 51.0
MMD1_k127_4769908_12 Tetratricopeptide repeat protein - - - 0.0002636 53.0
MMD1_k127_4769908_2 extracellular solute-binding protein, family 5 K02035,K15584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 407.0
MMD1_k127_4769908_3 - - - - 0.0000000000000000000000000000000000000000000000000000001941 206.0
MMD1_k127_4769908_4 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0022857,GO:0051179,GO:0051234,GO:0055085 - 0.00000000000000000000000000000000000000000000000000001179 202.0
MMD1_k127_4769908_5 COGs COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000001266 195.0
MMD1_k127_4769908_6 nuclease activity - - - 0.000000000000000000000000000000000000000001786 160.0
MMD1_k127_4769908_7 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000000007287 124.0
MMD1_k127_4769908_8 COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components K02034 - - 0.00000000000000000000007676 104.0
MMD1_k127_4769908_9 - - - - 0.00000000000005797 78.0
MMD1_k127_4770697_0 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000006849 262.0
MMD1_k127_4770697_1 acid phosphatase activity K03651 - 3.1.4.53 0.0000000000000000000000000000001942 136.0
MMD1_k127_4770697_2 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.000000000000000648 78.0
MMD1_k127_4770697_3 Transposase IS200 like K07491 - - 0.00000000005611 63.0
MMD1_k127_4770697_4 peptidyl-tyrosine sulfation - - - 0.0001479 46.0
MMD1_k127_4791330_0 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 311.0
MMD1_k127_4791330_1 Elongation factor SelB winged helix 3 K03833 - - 0.0000000000000000000000000000000000000000000000008548 185.0
MMD1_k127_4791330_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000001544 115.0
MMD1_k127_4791330_4 Protein of unknown function (DUF1523) - - - 0.000002134 56.0
MMD1_k127_4813115_0 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 326.0
MMD1_k127_4813115_1 Na dependent nucleoside transporter K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005331 284.0
MMD1_k127_4813115_2 protein with SCP PR1 domains - - - 0.00000000000000000000000000000000000000000000000000000003133 203.0
MMD1_k127_4813115_3 - - - - 0.0000000000000000000000000000000000000000000000000716 183.0
MMD1_k127_4813115_4 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.00000000000000000000000000000000000000000005152 167.0
MMD1_k127_4844873_0 ATPase BadF BadG BcrA BcrD type - - - 0.0 1028.0
MMD1_k127_4844873_1 Endopeptidase La K04076 - 3.4.21.53 2.1e-230 744.0
MMD1_k127_4844873_2 helix_turn_helix, Lux Regulon K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000000004437 239.0
MMD1_k127_4844873_3 Histidine kinase K07675 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000002932 213.0
MMD1_k127_4844873_4 B12 binding domain - - - 0.00000000000000000000000000000000000000000000004025 188.0
MMD1_k127_4844873_5 cellulase activity - - - 0.000000000000000000000000000001371 134.0
MMD1_k127_4844873_6 Belongs to the peptidase S16 family K04076 - 3.4.21.53 0.00001132 51.0
MMD1_k127_4859315_0 DHH family K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 446.0
MMD1_k127_4859315_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000001833 75.0
MMD1_k127_4860961_0 Histidine kinase K13040 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002312 278.0
MMD1_k127_4860961_1 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000005182 231.0
MMD1_k127_4860961_2 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000004405 220.0
MMD1_k127_4860961_3 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000000000000000000000464 194.0
MMD1_k127_4860961_4 COG0563 Adenylate kinase and related kinases - - - 0.0000000000000000000000000000000000000000000001786 172.0
MMD1_k127_4896176_0 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 431.0
MMD1_k127_4896176_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K15893 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 341.0
MMD1_k127_4896176_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005375 332.0
MMD1_k127_4896176_3 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006313 287.0
MMD1_k127_4896176_4 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000000000000000000000000002239 198.0
MMD1_k127_4896176_5 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000001286 195.0
MMD1_k127_4896176_6 Protein of unknown function (DUF1810) - - - 0.0000000000000000000000000000000000000000000000001992 178.0
MMD1_k127_4896176_7 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000002368 98.0
MMD1_k127_4950235_0 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 333.0
MMD1_k127_4950235_1 hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000000000000000000000000000000000000002798 239.0
MMD1_k127_4950235_2 Proton-conducting membrane transporter - - - 0.00000000000000000000000000000000000114 145.0
MMD1_k127_4950235_3 Proton-conducting membrane transporter - - - 0.000000000001633 70.0
MMD1_k127_4956785_0 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 381.0
MMD1_k127_4956785_1 Adenosine specific kinase K09129 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003623 264.0
MMD1_k127_4956785_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000002151 238.0
MMD1_k127_4956785_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000003743 217.0
MMD1_k127_4956785_4 Polysulfide reductase - - - 0.0000000000000000000000000000000000000000000000000007858 195.0
MMD1_k127_4956785_5 Zinc dependent phospholipase C - - - 0.000000000000000000000000000000000000000000000000004484 191.0
MMD1_k127_4956785_6 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000005562 176.0
MMD1_k127_4956785_7 Protein involved in formate dehydrogenase formation K02380 - - 0.00000000000000000000000001782 121.0
MMD1_k127_4956785_8 Dimerisation domain of Zinc Transporter - - - 0.0000000000000000000002258 96.0
MMD1_k127_5060592_0 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 488.0
MMD1_k127_5060592_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 453.0
MMD1_k127_5060592_2 Dual specificity phosphatase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000007236 200.0
MMD1_k127_5060592_3 - - - - 0.000000000000000000000000000000000000000000000004529 181.0
MMD1_k127_50761_0 Methylenetetrahydrofolate reductase K00297 GO:0003674,GO:0003824,GO:0004489,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005358 286.0
MMD1_k127_50761_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K14080 - 2.1.1.246,4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000001387 228.0
MMD1_k127_50761_2 Cobalamin synthesis protein cobW C-terminal domain - - - 0.0000000000000000000015 98.0
MMD1_k127_50761_3 phosphorelay signal transduction system K07714 - - 0.00000293 53.0
MMD1_k127_5106464_0 Tetratricopeptide repeat - - - 0.0 1336.0
MMD1_k127_5106464_1 OmpA family - - - 0.0 1191.0
MMD1_k127_5106464_2 Tetratricopeptide repeat - - - 1.978e-281 876.0
MMD1_k127_5106464_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000004215 229.0
MMD1_k127_5106464_4 Tetratricopeptide repeat - - - 0.0000000000005988 76.0
MMD1_k127_5126372_0 Domain of unknown function DUF11 - - - 0.0 1318.0
MMD1_k127_5126372_1 Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009257 533.0
MMD1_k127_5126372_12 YGGT family K02221 - - 0.00000000000000000000000000002571 119.0
MMD1_k127_5126372_13 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000002505 122.0
MMD1_k127_5126372_14 DivIVA protein K04074 - - 0.00000000000000000000000001006 115.0
MMD1_k127_5126372_15 Belongs to the UPF0235 family K09131 - - 0.000000000000000000000007041 104.0
MMD1_k127_5126372_16 helix_turn_helix, arabinose operon control protein K07506 - - 0.000000000000000000181 98.0
MMD1_k127_5126372_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 419.0
MMD1_k127_5126372_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 388.0
MMD1_k127_5126372_4 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 288.0
MMD1_k127_5126372_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001048 271.0
MMD1_k127_5126372_6 Protein of unknown function (DUF3313) - - - 0.000000000000000000000000000000000000000000000000000000000000000828 226.0
MMD1_k127_5126372_7 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.000000000000000000000000000000000000000000000000001224 194.0
MMD1_k127_5126372_8 Lipocalin-like domain K03098 - - 0.00000000000000000000000000000000000000000000000001684 185.0
MMD1_k127_5126372_9 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K15396 - 2.1.1.200 0.0000000000000000000000000000000000000000000000685 179.0
MMD1_k127_5133333_0 TIGRFAM ATP-dependent helicase HrpB K03579 - 3.6.4.13 5.87e-273 864.0
MMD1_k127_5133333_1 Elongator protein 3, MiaB family, Radical SAM - - - 3.331e-209 662.0
MMD1_k127_5133333_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 400.0
MMD1_k127_5133333_3 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 289.0
MMD1_k127_5133333_4 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000007378 94.0
MMD1_k127_5133333_5 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00001041 48.0
MMD1_k127_5140461_0 aconitate hydratase K01681 - 4.2.1.3 7.848e-278 867.0
MMD1_k127_5140461_1 Bacterial protein of unknown function (DUF853) - - - 3.816e-217 685.0
MMD1_k127_5140461_10 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 321.0
MMD1_k127_5140461_11 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 306.0
MMD1_k127_5140461_12 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 299.0
MMD1_k127_5140461_13 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 299.0
MMD1_k127_5140461_14 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007154 268.0
MMD1_k127_5140461_15 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002704 253.0
MMD1_k127_5140461_16 Ankyrin repeat - - - 0.0000000000000000000000000000000000000000000000000000000000004279 237.0
MMD1_k127_5140461_17 Ferritin-like domain K03594 - 1.16.3.1 0.0000000000000000000000000000000000001334 146.0
MMD1_k127_5140461_18 Universal stress protein family - - - 0.000000000000000000000000000000000002466 143.0
MMD1_k127_5140461_19 PFAM response regulator receiver - - - 0.00000000000000000000000000000001968 129.0
MMD1_k127_5140461_2 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 2.679e-216 687.0
MMD1_k127_5140461_20 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000000000000000000000000000105 121.0
MMD1_k127_5140461_21 - - - - 0.00000000000000000003153 93.0
MMD1_k127_5140461_22 cysteine-type peptidase activity - - - 0.0000000000000002073 93.0
MMD1_k127_5140461_24 Ankyrin repeats (many copies) - - - 0.0000000003346 74.0
MMD1_k127_5140461_3 PFAM magnesium chelatase ChlI subunit K07391 - - 1.247e-211 670.0
MMD1_k127_5140461_4 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 484.0
MMD1_k127_5140461_5 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 445.0
MMD1_k127_5140461_6 Alpha/beta hydrolase family K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 427.0
MMD1_k127_5140461_7 Alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006464 441.0
MMD1_k127_5140461_8 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 405.0
MMD1_k127_5140461_9 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 327.0
MMD1_k127_5143358_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 415.0
MMD1_k127_5143358_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 370.0
MMD1_k127_5143358_10 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000005648 79.0
MMD1_k127_5143358_11 COG0457 FOG TPR repeat - - - 0.000000000000002799 84.0
MMD1_k127_5143358_12 - - - - 0.000000000001161 73.0
MMD1_k127_5143358_13 - - - - 0.00000000001575 70.0
MMD1_k127_5143358_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000078 344.0
MMD1_k127_5143358_3 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 348.0
MMD1_k127_5143358_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 295.0
MMD1_k127_5143358_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000827 209.0
MMD1_k127_5143358_6 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000006684 196.0
MMD1_k127_5143358_7 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000002329 184.0
MMD1_k127_5143358_8 Ribosomal protein S9/S16 K02996 - - 0.00000000000000000000000000000000000000000000000747 175.0
MMD1_k127_5143358_9 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000004395 148.0
MMD1_k127_5149371_0 Metallo-beta-lactamase superfamily K22405 - 1.6.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 605.0
MMD1_k127_5149371_1 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 435.0
MMD1_k127_5149371_2 Belongs to the Fur family K03711,K09825 - - 0.000000000000000000000000000000000000001201 151.0
MMD1_k127_5149371_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000001003 127.0
MMD1_k127_5149371_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000001019 126.0
MMD1_k127_5149371_5 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.000000000000000007832 84.0
MMD1_k127_5161159_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 513.0
MMD1_k127_5161159_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K02297 - 1.10.3.10,1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002369 278.0
MMD1_k127_5161159_2 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000002682 239.0
MMD1_k127_5161159_3 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.00000000000000000002575 94.0
MMD1_k127_5179765_0 Clp protease K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 316.0
MMD1_k127_5179765_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000005265 190.0
MMD1_k127_5179765_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000001929 56.0
MMD1_k127_5183205_0 [glutamate-ammonia-ligase] adenylyltransferase activity K00982 GO:0000166,GO:0000287,GO:0000820,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006521,GO:0006541,GO:0006542,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008882,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0010565,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0019222,GO:0019752,GO:0030554,GO:0031323,GO:0032553,GO:0032555,GO:0032559,GO:0033238,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.42,2.7.7.89 4.3e-226 736.0
MMD1_k127_5183205_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 4.975e-211 677.0
MMD1_k127_5183205_2 Lipid A biosynthesis K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000004177 249.0
MMD1_k127_5183205_3 Thioesterase superfamily - - - 0.0000000000000000000000000004656 118.0
MMD1_k127_5188353_0 Bacterial regulatory protein, Fis family K07715 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 599.0
MMD1_k127_5188353_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 442.0
MMD1_k127_5188353_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000003826 247.0
MMD1_k127_5188353_3 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000002188 102.0
MMD1_k127_5188353_4 nuclear chromosome segregation - - - 0.000000000000000001235 91.0
MMD1_k127_5188353_5 2Fe-2S -binding domain protein - - - 0.00000000000006698 75.0
MMD1_k127_5236519_0 PFAM ferredoxin-dependent glutamate synthase - - - 1.226e-292 903.0
MMD1_k127_5236519_1 FMN binding - - - 2.054e-280 868.0
MMD1_k127_5236519_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000002594 110.0
MMD1_k127_5236519_11 Ribonuclease R winged-helix domain protein K09720 - - 0.00000000000000000000000006021 111.0
MMD1_k127_5236519_12 - - - - 0.00000000000000000000001885 109.0
MMD1_k127_5236519_13 Cyclic nucleotide-monophosphate binding domain K04739 - - 0.0000006769 56.0
MMD1_k127_5236519_2 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 3.011e-232 732.0
MMD1_k127_5236519_3 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 9.145e-206 658.0
MMD1_k127_5236519_4 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 578.0
MMD1_k127_5236519_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 441.0
MMD1_k127_5236519_6 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 387.0
MMD1_k127_5236519_7 Protein of unknown function (DUF1207) - - - 0.000000000000000000000000000000000000000000000000000001467 208.0
MMD1_k127_5236519_8 Bacterial regulatory proteins, crp family K01420 - - 0.000000000000000000000000000000000000000000006714 170.0
MMD1_k127_5236519_9 Protein of unknown function (DUF2892) - - - 0.000000000000000000000000007291 110.0
MMD1_k127_5243227_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 9.665e-207 654.0
MMD1_k127_5253868_0 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 306.0
MMD1_k127_5253868_1 Thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000001858 128.0
MMD1_k127_5253868_2 - - - - 0.00000000000000000000000000256 115.0
MMD1_k127_5253868_3 cellulose binding - - - 0.0000000004957 72.0
MMD1_k127_5269558_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 - 5.4.2.2 3.052e-213 669.0
MMD1_k127_5269558_1 Transcriptional regulator sugar kinase K00886 - 2.7.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000271 280.0
MMD1_k127_5269558_2 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 0.0000000000000000000000000000000000000000000000002654 177.0
MMD1_k127_5277123_0 PFAM Phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 527.0
MMD1_k127_5277123_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 321.0
MMD1_k127_5277123_2 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.000000000000000000000000000000000000000000000000000001467 208.0
MMD1_k127_5277123_3 Glycine-zipper domain - - - 0.000000000000000000000000000000000000000000000000000004117 195.0
MMD1_k127_5277123_4 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000005227 171.0
MMD1_k127_5277123_5 TIGRFAM death-on-curing family protein K07341 - - 0.00000000000000000000000002473 115.0
MMD1_k127_5277123_7 - - - - 0.000000000000000000006699 97.0
MMD1_k127_5315130_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03694,K03695 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.0 1153.0
MMD1_k127_5315130_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002427 273.0
MMD1_k127_5315130_2 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000003967 179.0
MMD1_k127_5315130_3 Transcriptional regulator, MerR family K13640 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000008141 134.0
MMD1_k127_5315130_4 - - - - 0.0000000006438 64.0
MMD1_k127_5315130_5 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 GO:0000003,GO:0001655,GO:0001822,GO:0001889,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004457,GO:0004611,GO:0004613,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006109,GO:0006111,GO:0006113,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007610,GO:0008150,GO:0008152,GO:0008906,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009410,GO:0009605,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010646,GO:0010647,GO:0010675,GO:0010906,GO:0014070,GO:0014074,GO:0015036,GO:0015980,GO:0016042,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016651,GO:0016667,GO:0016668,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018991,GO:0019098,GO:0019222,GO:0019249,GO:0019318,GO:0019319,GO:0019320,GO:0019362,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019516,GO:0019538,GO:0019541,GO:0019543,GO:0019563,GO:0019626,GO:0019637,GO:0019659,GO:0019660,GO:0019661,GO:0019666,GO:0019674,GO:0019693,GO:0019751,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0030145,GO:0030154,GO:0030703,GO:0030855,GO:0031323,GO:0031667,GO:0031960,GO:0031974,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0033993,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035690,GO:0036211,GO:0042221,GO:0042493,GO:0042594,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043434,GO:0043436,GO:0043687,GO:0043900,GO:0043903,GO:0043949,GO:0043950,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045471,GO:0046031,GO:0046034,GO:0046164,GO:0046174,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0046434,GO:0046459,GO:0046483,GO:0046496,GO:0046677,GO:0046683,GO:0046700,GO:0046872,GO:0046914,GO:0047134,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051186,GO:0051384,GO:0051591,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060429,GO:0061005,GO:0061008,GO:0062012,GO:0065007,GO:0070013,GO:0070365,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071548,GO:0071549,GO:0071704,GO:0071840,GO:0072001,GO:0072071,GO:0072329,GO:0072330,GO:0072521,GO:0072524,GO:0080090,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533 4.1.1.32 0.000000007407 57.0
MMD1_k127_5315560_0 COG0058 Glucan phosphorylase - - - 5.998e-252 788.0
MMD1_k127_5315560_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.784e-196 621.0
MMD1_k127_5315560_10 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000000000001366 192.0
MMD1_k127_5315560_11 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000000002482 168.0
MMD1_k127_5315560_12 Predicted membrane protein (DUF2127) - - - 0.00000000000000000000000000000000000000004003 156.0
MMD1_k127_5315560_13 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000000001737 156.0
MMD1_k127_5315560_14 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000001351 141.0
MMD1_k127_5315560_15 Zincin-like metallopeptidase - - - 0.0000000000000000000000000009103 117.0
MMD1_k127_5315560_16 Domain of unknown function (DU1801) - - - 0.000000000000000000000309 100.0
MMD1_k127_5315560_17 S23 ribosomal protein - - - 0.000000000000000007832 84.0
MMD1_k127_5315560_18 Putative zinc- or iron-chelating domain - - - 0.0000000000000005319 87.0
MMD1_k127_5315560_19 S23 ribosomal protein - - - 0.000000000003026 70.0
MMD1_k127_5315560_2 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835,K01840 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 549.0
MMD1_k127_5315560_20 Protein of unknown function (DUF507) - - - 0.000000000006155 70.0
MMD1_k127_5315560_21 Protein of unknown function (DUF507) - - - 0.00000000002061 69.0
MMD1_k127_5315560_22 Predicted membrane protein (DUF2232) - - - 0.0000000001683 68.0
MMD1_k127_5315560_23 - - - - 0.000002613 56.0
MMD1_k127_5315560_24 Anti-sigma-K factor rskA - - - 0.0003313 51.0
MMD1_k127_5315560_3 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005693 508.0
MMD1_k127_5315560_4 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 463.0
MMD1_k127_5315560_5 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 432.0
MMD1_k127_5315560_6 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 381.0
MMD1_k127_5315560_7 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001021 285.0
MMD1_k127_5315560_8 lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000003183 262.0
MMD1_k127_5315560_9 GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000009512 214.0
MMD1_k127_5318617_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.0 1294.0
MMD1_k127_5318617_1 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000763 367.0
MMD1_k127_5318617_2 Biotin-lipoyl like K07799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 344.0
MMD1_k127_5318617_3 transcriptional regulator - GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000001676 175.0
MMD1_k127_5331643_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 359.0
MMD1_k127_5331643_1 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 314.0
MMD1_k127_5331643_2 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008237 258.0
MMD1_k127_5331643_3 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000000000000000000000000000002293 208.0
MMD1_k127_5331643_4 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000163 191.0
MMD1_k127_5331643_5 Domain present in phytochromes and cGMP-specific phosphodiesterases. K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000003259 193.0
MMD1_k127_5338110_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 304.0
MMD1_k127_5338110_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000082 262.0
MMD1_k127_5338110_2 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000001281 121.0
MMD1_k127_5338110_3 PD-(D/E)XK nuclease superfamily - - - 0.0000000004272 63.0
MMD1_k127_5338110_4 - - - - 0.00001694 53.0
MMD1_k127_5377407_0 Glycogen debranching enzyme - - - 0.0 1080.0
MMD1_k127_5377407_1 Alpha amylase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006041 247.0
MMD1_k127_5377407_2 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000002683 190.0
MMD1_k127_5377407_3 Cysteine rich repeat - - - 0.000000000000000000000000000000000000000000001953 171.0
MMD1_k127_5435237_0 BadF BadG BcrA BcrD - - - 5.512e-252 802.0
MMD1_k127_5435237_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008552 364.0
MMD1_k127_5435237_2 ABC transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 297.0
MMD1_k127_5435237_3 Cyclophilin-like K09143 - - 0.0000000000000000000000000000000000000000004918 160.0
MMD1_k127_5435237_4 His Kinase A (phosphoacceptor) domain - - - 0.000000057 64.0
MMD1_k127_5494915_0 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.0 1031.0
MMD1_k127_5494915_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 3.479e-319 990.0
MMD1_k127_5494915_10 Response regulator receiver domain K03413 - - 0.00000000000000000000004579 105.0
MMD1_k127_5494915_11 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000006057 80.0
MMD1_k127_5494915_12 - - - - 0.000000000002869 72.0
MMD1_k127_5494915_2 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030312,GO:0030955,GO:0031004,GO:0031224,GO:0031226,GO:0031420,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 1.852e-258 810.0
MMD1_k127_5494915_3 Amino acid permease - - - 7.463e-251 790.0
MMD1_k127_5494915_4 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 398.0
MMD1_k127_5494915_5 Adenylate kinase, active site lid K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 322.0
MMD1_k127_5494915_6 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 325.0
MMD1_k127_5494915_7 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 - 3.6.3.12 0.00000000000000000000000000000000000000000000000000000000000000000002713 237.0
MMD1_k127_5494915_8 PFAM ATP-binding region ATPase domain protein K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000008782 208.0
MMD1_k127_5494915_9 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.000000000000000000000000000000000000000000000000817 184.0
MMD1_k127_5496121_0 Iron-sulfur cluster-binding domain K06871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007457 418.0
MMD1_k127_5496121_1 PFAM OmpA MotB domain protein K02557 - - 0.0000000000000000000000000000000000002057 149.0
MMD1_k127_5496121_2 Paraquat-inducible protein A K03808 - - 0.0000000000005755 71.0
MMD1_k127_5496121_3 Cysteine rich repeat - - - 0.0000001827 59.0
MMD1_k127_5510590_0 acetyl-CoA catabolic process K00197 - 2.1.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 477.0
MMD1_k127_5510590_1 one-carbon metabolic process K00194,K00198 - 1.2.7.4,2.1.1.245 0.0000000000000000000000000000000000000000000000000001704 188.0
MMD1_k127_5529230_0 ATP synthase subunit D K02120 - - 0.0000000000000000000000000000000000000000000000000000000000000000001175 236.0
MMD1_k127_5529230_1 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000003027 167.0
MMD1_k127_5529230_2 PFAM EamA-like transporter family - - - 0.00000000000000000000005169 101.0
MMD1_k127_5529230_3 NosL K19342 - - 0.00000000001822 70.0
MMD1_k127_5541783_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008528 347.0
MMD1_k127_5541783_1 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000005188 165.0
MMD1_k127_5541783_2 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000009835 140.0
MMD1_k127_5584707_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 417.0
MMD1_k127_5607230_0 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000002291 274.0
MMD1_k127_5607230_1 auxin-activated signaling pathway K07088 - - 0.000000000000000000000000000000000000000000000000000000000000007459 228.0
MMD1_k127_5607230_2 glycolate biosynthetic process K01091 - 3.1.3.18 0.000000000000000000004852 97.0
MMD1_k127_5630828_0 PFAM Phage derived protein Gp49-like (DUF891) - - - 0.00000000000008366 75.0
MMD1_k127_5630828_1 - - - - 0.000000000002318 72.0
MMD1_k127_5663504_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1114.0
MMD1_k127_5663504_1 Uncharacterized protein conserved in bacteria (DUF2344) - - - 6.737e-223 717.0
MMD1_k127_5663504_10 rod shape-determining protein MreD K03571 - - 0.0000029 56.0
MMD1_k127_5663504_2 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 499.0
MMD1_k127_5663504_3 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004611 404.0
MMD1_k127_5663504_4 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 314.0
MMD1_k127_5663504_5 Acetoacetate decarboxylase (ADC) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002003 244.0
MMD1_k127_5663504_6 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000008933 231.0
MMD1_k127_5663504_7 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000000000000000000000000000000000000000000001698 220.0
MMD1_k127_5663504_8 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000007305 158.0
MMD1_k127_5663504_9 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.000000000000000000000000000000001366 138.0
MMD1_k127_5685509_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 1.748e-207 655.0
MMD1_k127_5685509_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 3.525e-196 621.0
MMD1_k127_5685509_2 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006523 537.0
MMD1_k127_5685509_3 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 325.0
MMD1_k127_5685509_4 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000005362 220.0
MMD1_k127_5685509_5 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000000003571 166.0
MMD1_k127_5685509_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000001591 122.0
MMD1_k127_5685509_7 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0008150,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0061077,GO:0071575,GO:0071944,GO:0098552 5.2.1.8 0.00000000000000008068 89.0
MMD1_k127_5821919_0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 331.0
MMD1_k127_5821919_1 Permease family K06901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002994 283.0
MMD1_k127_5821919_2 GYD domain - - - 0.00000000000000000000000000000000000000002046 154.0
MMD1_k127_5821919_3 Protein of unknown function (DUF559) - - - 0.0000000000000000000000000000000000003225 144.0
MMD1_k127_5821919_4 Protein of unknown function (DUF3187) - - - 0.0000000000000002012 87.0
MMD1_k127_593014_0 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 346.0
MMD1_k127_593014_1 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000001813 184.0
MMD1_k127_593014_2 Tetratricopeptide repeat - - - 0.00003399 52.0
MMD1_k127_597934_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.404e-212 667.0
MMD1_k127_597934_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 546.0
MMD1_k127_597934_10 Imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001553 270.0
MMD1_k127_597934_11 Pfam:DUF2029 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001491 253.0
MMD1_k127_597934_12 imidazoleglycerol-phosphate synthase activity K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.0000000000000000000000000000000000000000000000000000000000000007568 223.0
MMD1_k127_597934_13 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000002569 218.0
MMD1_k127_597934_14 50S ribosomal protein L31 K02909 - - 0.0000000000000000000000007017 106.0
MMD1_k127_597934_15 SMART Tetratricopeptide - - - 0.000000000000000000000003971 111.0
MMD1_k127_597934_16 PFAM VanZ - - - 0.00000000000000000000235 106.0
MMD1_k127_597934_2 GtrA-like protein K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 506.0
MMD1_k127_597934_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008914 502.0
MMD1_k127_597934_4 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003402 469.0
MMD1_k127_597934_5 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 410.0
MMD1_k127_597934_6 Protein of unknown function (DUF1385) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004728 346.0
MMD1_k127_597934_7 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 329.0
MMD1_k127_597934_8 Aminotransferase class I and II K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 306.0
MMD1_k127_597934_9 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006635 295.0
MMD1_k127_598982_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 369.0
MMD1_k127_598982_1 - - - - 0.00000000001227 70.0
MMD1_k127_598982_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.0000000001592 63.0
MMD1_k127_599537_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005667 286.0
MMD1_k127_599537_1 ribonucleoside-diphosphate reductase activity K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000001663 184.0
MMD1_k127_599537_2 Beta-lactamase K17836 - 3.5.2.6 0.00000000000000000000000000000000000003039 157.0
MMD1_k127_599537_3 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02504,K02652 - - 0.0000000000000000000000005071 114.0
MMD1_k127_599537_4 COG NOG19146 non supervised orthologous group - - - 0.0000000005847 61.0
MMD1_k127_599537_5 Protein of unknown function (DUF1573) - - - 0.00006424 50.0
MMD1_k127_61277_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 1.759e-282 927.0
MMD1_k127_61277_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 2.902e-230 722.0
MMD1_k127_61277_10 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 327.0
MMD1_k127_61277_11 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006301 297.0
MMD1_k127_61277_12 PFAM PP-loop domain protein K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 297.0
MMD1_k127_61277_13 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 299.0
MMD1_k127_61277_14 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009274 297.0
MMD1_k127_61277_15 regulatory protein IclR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006778 274.0
MMD1_k127_61277_16 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003333 269.0
MMD1_k127_61277_17 HNH nucleases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001709 261.0
MMD1_k127_61277_18 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000002816 250.0
MMD1_k127_61277_19 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000007452 227.0
MMD1_k127_61277_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 3.239e-201 634.0
MMD1_k127_61277_20 phosphatidylethanolamine metabolic process K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000008589 228.0
MMD1_k127_61277_21 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000003137 228.0
MMD1_k127_61277_22 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000004559 201.0
MMD1_k127_61277_23 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000001949 198.0
MMD1_k127_61277_24 Protein of unknown function DUF89 K09116 - - 0.0000000000000000000000000000000000000000000000001618 196.0
MMD1_k127_61277_25 Telomere recombination K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000002823 180.0
MMD1_k127_61277_26 NapC/NirT cytochrome c family, N-terminal region - - - 0.00000000000000000000000000000000000002779 154.0
MMD1_k127_61277_27 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000005866 122.0
MMD1_k127_61277_28 - - - - 0.000000000000000000000000000009809 130.0
MMD1_k127_61277_29 heat shock protein binding - - - 0.00000000000000005763 87.0
MMD1_k127_61277_3 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 571.0
MMD1_k127_61277_30 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000004557 69.0
MMD1_k127_61277_31 Domain of unknown function (DUF3786) - - - 0.00000000004068 72.0
MMD1_k127_61277_32 Prokaryotic N-terminal methylation motif - - - 0.00002003 53.0
MMD1_k127_61277_33 Fic/DOC family - - - 0.00004733 48.0
MMD1_k127_61277_4 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009098 573.0
MMD1_k127_61277_5 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 576.0
MMD1_k127_61277_6 3-isopropylmalate dehydrogenase activity K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0040007,GO:0044424,GO:0044464,GO:0055114 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 561.0
MMD1_k127_61277_7 SMART Nucleotide binding protein, PINc K07175 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 553.0
MMD1_k127_61277_8 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 482.0
MMD1_k127_61277_9 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 349.0
MMD1_k127_6764_0 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007992 382.0
MMD1_k127_6764_1 CO dehydrogenase K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 293.0
MMD1_k127_6764_2 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000001001 252.0
MMD1_k127_6764_3 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000009357 233.0
MMD1_k127_6764_4 PFAM 5-formyltetrahydrofolate cyclo-ligase K01934 - 6.3.3.2 0.0000000000000000000000000000000000000008578 154.0
MMD1_k127_6764_5 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000001296 108.0
MMD1_k127_6764_6 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000002091 85.0
MMD1_k127_725481_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1251.0
MMD1_k127_725481_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 5.351e-298 935.0
MMD1_k127_725481_10 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000000000001987 92.0
MMD1_k127_725481_2 Peptidase family M48 K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 377.0
MMD1_k127_725481_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 329.0
MMD1_k127_725481_4 N-terminal domain of galactosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005099 305.0
MMD1_k127_725481_5 Atpase (Aaa K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001127 261.0
MMD1_k127_725481_6 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005113 248.0
MMD1_k127_725481_7 Response regulator receiver domain - - - 0.0000000000000000000000000000000000001547 155.0
MMD1_k127_725481_8 - - - - 0.000000000000000000000000000000002842 137.0
MMD1_k127_725481_9 PFAM TfoX N-terminal domain K07343 - - 0.000000000000000000000000275 118.0
MMD1_k127_735146_0 NeuB family K03856,K04516 - 2.5.1.54,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 427.0
MMD1_k127_735146_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 426.0
MMD1_k127_735146_10 SpoVT / AbrB like domain - - - 0.0000000000003951 71.0
MMD1_k127_735146_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 385.0
MMD1_k127_735146_3 Tim44 K02117,K08678,K11646,K15539,K17835,K21636 - 1.1.98.6,1.4.1.24,3.6.3.14,3.6.3.15,4.1.1.35,4.1.99.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000388 338.0
MMD1_k127_735146_4 UPF0126 domain - - - 0.000000000000000000000000000000000000000000000000000000000008064 214.0
MMD1_k127_735146_5 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000146 177.0
MMD1_k127_735146_6 PIN domain - - - 0.000000000000000000000000000000363 129.0
MMD1_k127_735146_7 TIGRFAM 4-oxalocrotonate tautomerase family enzyme K01821 - 5.3.2.6 0.00000000000000000000000000000522 121.0
MMD1_k127_742971_0 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 303.0
MMD1_k127_742971_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003028 256.0
MMD1_k127_756173_0 PFAM ABC transporter related K06020 - 3.6.3.25 1.238e-302 936.0
MMD1_k127_756173_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 1.25e-277 885.0
MMD1_k127_756173_10 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 430.0
MMD1_k127_756173_11 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006673 423.0
MMD1_k127_756173_12 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000414 412.0
MMD1_k127_756173_13 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006268 404.0
MMD1_k127_756173_14 response regulator K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 404.0
MMD1_k127_756173_15 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 368.0
MMD1_k127_756173_16 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 370.0
MMD1_k127_756173_17 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 361.0
MMD1_k127_756173_18 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 327.0
MMD1_k127_756173_19 Protoporphyrinogen oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 336.0
MMD1_k127_756173_2 Doubled CXXCH motif (Paired_CXXCH_1) - - - 3.746e-276 863.0
MMD1_k127_756173_21 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 302.0
MMD1_k127_756173_22 PPIC-type PPIASE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 307.0
MMD1_k127_756173_23 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000648 282.0
MMD1_k127_756173_24 Cytochrome b/b6/petB K03887 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002521 267.0
MMD1_k127_756173_25 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000001764 237.0
MMD1_k127_756173_26 Redoxin K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000002651 231.0
MMD1_k127_756173_27 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000001089 222.0
MMD1_k127_756173_29 Acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000002084 210.0
MMD1_k127_756173_3 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL-like protein K07303 - 1.3.99.16 1.07e-236 755.0
MMD1_k127_756173_30 - K07112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000004441 205.0
MMD1_k127_756173_31 - - - - 0.00000000000000000000000000000000000000000000000000007088 196.0
MMD1_k127_756173_32 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000002014 191.0
MMD1_k127_756173_33 Bacterial membrane protein YfhO - - - 0.0000000000000000000000000000000000000000000000000002717 210.0
MMD1_k127_756173_34 Protein of unknown function (DUF1255) K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000000000000000003028 183.0
MMD1_k127_756173_35 Methyltransferase K15256 - - 0.000000000000000000000000000000000000000000000000004141 202.0
MMD1_k127_756173_36 Beta-lactamase K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000001935 172.0
MMD1_k127_756173_37 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.000000000000000000000000000000000000000000744 164.0
MMD1_k127_756173_38 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000003106 170.0
MMD1_k127_756173_39 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000005087 168.0
MMD1_k127_756173_4 SMART Elongator protein 3 MiaB NifB - - - 8.881e-207 653.0
MMD1_k127_756173_40 histidine kinase, HAMP - - - 0.0000000000000000000000000000000000002599 160.0
MMD1_k127_756173_41 Thought to be an acetyltransferase that modifies the fucose of the nod factor - - - 0.0000000000000000000000000000000000007518 153.0
MMD1_k127_756173_42 Methyltransferase domain - - - 0.00000000000000000000000000000000000265 148.0
MMD1_k127_756173_43 transferase activity, transferring acyl groups K03824 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000001239 141.0
MMD1_k127_756173_44 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.000000000000000000000000002976 116.0
MMD1_k127_756173_45 transcriptional K03710 - - 0.000000000000000000000000006701 119.0
MMD1_k127_756173_46 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000001038 108.0
MMD1_k127_756173_48 - - - - 0.00000000000000000177 89.0
MMD1_k127_756173_49 amine dehydrogenase activity - - - 0.000000000000004851 86.0
MMD1_k127_756173_5 Glycosyltransferase like family 2 - - - 1.072e-194 615.0
MMD1_k127_756173_50 COG0589 Universal stress protein UspA and related nucleotide-binding - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000004021 70.0
MMD1_k127_756173_51 Belongs to the sulfur carrier protein TusA family K04085 - - 0.00000000005845 66.0
MMD1_k127_756173_52 Universal stress protein family - - - 0.0000000001325 70.0
MMD1_k127_756173_53 Histidine kinase - - - 0.0000000005894 70.0
MMD1_k127_756173_54 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000118 69.0
MMD1_k127_756173_55 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000171 64.0
MMD1_k127_756173_56 PFAM DsrE DsrF-like family - - - 0.0000000184 60.0
MMD1_k127_756173_57 PFAM Universal stress protein family - - - 0.00000265 58.0
MMD1_k127_756173_58 Universal stress protein family - - - 0.000005226 55.0
MMD1_k127_756173_59 response regulator K11638 - - 0.00008006 54.0
MMD1_k127_756173_6 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008098 590.0
MMD1_k127_756173_60 peptidylprolyl isomerase K03770 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0008150,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0061077,GO:0071575,GO:0071944,GO:0098552 5.2.1.8 0.0001049 53.0
MMD1_k127_756173_61 - - - - 0.0001385 46.0
MMD1_k127_756173_7 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 555.0
MMD1_k127_756173_8 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 454.0
MMD1_k127_756173_9 Sulphur transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 432.0
MMD1_k127_759324_0 PFAM transposase IS116 IS110 IS902 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 482.0
MMD1_k127_759324_1 Uncharacterized protein family (UPF0051) K07033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 355.0
MMD1_k127_759324_2 PFAM ABC transporter related K09013 - - 0.000000000000000000000000000000000000000000000000000000000000002449 225.0
MMD1_k127_759324_3 OmpA family K02557 - - 0.00000000000000000000000000000000000000000000000000000000002212 217.0
MMD1_k127_759324_4 Catalyzes the reduction of arsenate As(V) to arsenite As(III) K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000009035 162.0
MMD1_k127_759324_5 - - - - 0.000000000000000000000000004863 113.0
MMD1_k127_759324_6 Protein of unknown function (DUF1566) - - - 0.000000000000000000000003853 111.0
MMD1_k127_759324_7 Belongs to the HesB IscA family K13628 - - 0.0000001812 54.0
MMD1_k127_759324_8 transcriptional activator domain - - - 0.000008741 49.0
MMD1_k127_779383_0 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 297.0
MMD1_k127_779383_1 PFAM methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000001012 211.0
MMD1_k127_779383_2 domain protein - - - 0.000000000000000000000000000000000000000000000000000007763 205.0
MMD1_k127_779383_3 GIY-YIG catalytic domain - - - 0.000000000000000000000000000000000003223 139.0
MMD1_k127_779383_4 YCII-related domain - - - 0.00000005364 63.0
MMD1_k127_791910_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1319.0
MMD1_k127_791910_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 6.338e-237 742.0
MMD1_k127_791910_10 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008784 357.0
MMD1_k127_791910_11 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005172 283.0
MMD1_k127_791910_12 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.000000000000000000000000000000000000000000000000000000000000004046 222.0
MMD1_k127_791910_13 Response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000006749 232.0
MMD1_k127_791910_14 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000005516 200.0
MMD1_k127_791910_15 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000004969 188.0
MMD1_k127_791910_16 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000000000000000000000000001081 187.0
MMD1_k127_791910_17 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000116 195.0
MMD1_k127_791910_19 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000006438 161.0
MMD1_k127_791910_2 Orn/Lys/Arg decarboxylase, C-terminal domain K01582,K01585 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008923,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564 4.1.1.18,4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007189 587.0
MMD1_k127_791910_20 3-beta hydroxysteroid dehydrogenase K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000001169 159.0
MMD1_k127_791910_21 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000000000000000000000009963 156.0
MMD1_k127_791910_22 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000001467 124.0
MMD1_k127_791910_23 NLP P60 protein - - - 0.0000000000000000000000000001649 121.0
MMD1_k127_791910_24 part of a sulfur-relay system K11179 - - 0.0000000000000000000000001814 108.0
MMD1_k127_791910_25 membrane transporter protein K07090 - - 0.00000000000000003053 91.0
MMD1_k127_791910_3 Domain of unknown function (DUF4445) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 587.0
MMD1_k127_791910_4 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 513.0
MMD1_k127_791910_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 437.0
MMD1_k127_791910_6 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005395 426.0
MMD1_k127_791910_7 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 GO:0003674,GO:0003824,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0010487,GO:0016740,GO:0016765,GO:0034641,GO:0042401,GO:0043919,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 420.0
MMD1_k127_791910_8 PFAM NMT1 THI5 like K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 422.0
MMD1_k127_791910_9 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 392.0
MMD1_k127_819729_0 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008677,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005629 362.0
MMD1_k127_819729_1 - - - - 0.00000000000000000000000000000000000000000000000000000005002 203.0
MMD1_k127_819729_2 Protein of unknown function (DUF402) - - - 0.0000000000000001197 87.0
MMD1_k127_832274_0 Aconitase C-terminal domain K01681 - 4.2.1.3 0.0 1015.0
MMD1_k127_832274_1 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 362.0
MMD1_k127_832274_2 leucyltransferase activity K00684 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0044424,GO:0044464,GO:0140096 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007367 275.0
MMD1_k127_832274_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000000000000007775 169.0
MMD1_k127_832274_4 - - - - 0.000000000000000000000000000000000000000004781 173.0
MMD1_k127_83801_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 451.0
MMD1_k127_83801_1 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000781 275.0
MMD1_k127_83801_2 PFAM FAD dependent oxidoreductase K07137 - - 0.000000000000000000000000000000000000000000000000000000000000006072 223.0
MMD1_k127_843048_0 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 295.0
MMD1_k127_843048_1 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000001761 101.0
MMD1_k127_843048_2 - - - - 0.000000000000000002144 94.0
MMD1_k127_843048_3 - - - - 0.0000000007658 61.0
MMD1_k127_843048_5 - - - - 0.0000006803 55.0
MMD1_k127_843048_6 - - - - 0.0000008795 59.0
MMD1_k127_843048_7 glycerophosphoryl diester phosphodiesterase - - - 0.000001026 50.0
MMD1_k127_843048_8 response to heat K03668 - - 0.000001848 59.0
MMD1_k127_851226_0 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 373.0
MMD1_k127_851226_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000205 267.0
MMD1_k127_851226_2 UbiA prenyltransferase family K03179 - 2.5.1.39 0.000000000000000000000000007313 112.0
MMD1_k127_861303_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 367.0
MMD1_k127_861303_1 Peptidase MA superfamily - - - 0.000000000000000000000000000000000000000000000000000000003809 213.0
MMD1_k127_861303_2 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000006601 143.0
MMD1_k127_861303_3 Sporulation related domain - - - 0.00000001352 66.0
MMD1_k127_872830_0 Mo-co oxidoreductase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000541 426.0
MMD1_k127_872830_1 Cytochrome c - - - 0.0000000000000002072 83.0
MMD1_k127_872830_2 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000002346 54.0
MMD1_k127_879555_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 1.365e-258 830.0
MMD1_k127_879555_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K12954,K12956,K17686,K21887 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0009405,GO:0010035,GO:0010038,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0042221,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0046688,GO:0050896,GO:0051704,GO:0071944 3.6.3.4,3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 532.0
MMD1_k127_879555_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007734 452.0
MMD1_k127_879555_3 NAD(P)H-binding K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 387.0
MMD1_k127_879555_4 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000004727 249.0
MMD1_k127_879555_5 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000000000000000005301 211.0
MMD1_k127_879555_6 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000001256 150.0
MMD1_k127_879555_7 Transcriptional regulator - - - 0.0000000000000000001598 97.0
MMD1_k127_879555_8 membrane K12340 - - 0.0000000000000000265 95.0
MMD1_k127_879555_9 Cytochrome oxidase maturation protein - - - 0.00000000007233 63.0
MMD1_k127_900603_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 376.0
MMD1_k127_900603_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006586 370.0
MMD1_k127_900603_10 IMG reference gene - - - 0.00000000000000000000000000000000001631 155.0
MMD1_k127_900603_11 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000008031 142.0
MMD1_k127_900603_12 SMART Tetratricopeptide - - - 0.00000000000000000000000001519 127.0
MMD1_k127_900603_13 - - - - 0.0000000000000000000616 104.0
MMD1_k127_900603_14 Tetratricopeptide TPR_2 repeat protein - - - 0.000000001638 65.0
MMD1_k127_900603_15 TPR repeat - - - 0.000002392 58.0
MMD1_k127_900603_16 COG0457 FOG TPR repeat - - - 0.000004406 57.0
MMD1_k127_900603_2 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002645 290.0
MMD1_k127_900603_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001596 288.0
MMD1_k127_900603_4 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000105 259.0
MMD1_k127_900603_5 PFAM Stage II sporulation K06381 - - 0.000000000000000000000000000000000000000000000000000000000000000004264 240.0
MMD1_k127_900603_6 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000001207 225.0
MMD1_k127_900603_7 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000002547 196.0
MMD1_k127_900603_8 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000009323 174.0
MMD1_k127_900603_9 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000001426 157.0
MMD1_k127_909702_0 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 432.0
MMD1_k127_909702_1 Actin K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 418.0
MMD1_k127_909702_2 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000006522 164.0
MMD1_k127_909702_3 rod shape-determining protein MreD K03571 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.00000001423 65.0
MMD1_k127_913406_0 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004018 279.0
MMD1_k127_913406_1 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000009652 214.0
MMD1_k127_913406_2 - - - - 0.000000000000000006873 93.0
MMD1_k127_919847_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 363.0
MMD1_k127_919847_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 357.0
MMD1_k127_919847_2 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 337.0
MMD1_k127_919847_3 SNARE associated Golgi protein - - - 0.0000000342 56.0
MMD1_k127_955944_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000001155 255.0
MMD1_k127_955944_1 ACT domain K01653 - 2.2.1.6 0.00000000000000000000000000001064 119.0
MMD1_k127_98551_0 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002618 280.0
MMD1_k127_98551_1 phosphatase activity K20881 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008477,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016798,GO:0016799,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050483,GO:0050484 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000005782 267.0
MMD1_k127_98551_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000008107 212.0
MMD1_k127_9938_0 4Fe-4S binding domain - - - 1.367e-223 703.0
MMD1_k127_9938_1 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 556.0
MMD1_k127_9938_2 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 481.0
MMD1_k127_9938_3 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 404.0
MMD1_k127_9938_4 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003568 256.0
MMD1_k127_9938_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001753 246.0
MMD1_k127_9938_6 Domain of unknown function (DUF4337) - - - 0.00000000000000000000000000000000000000000000000000000000000001235 220.0
MMD1_k127_9938_7 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000002729 213.0
MMD1_k127_9938_8 LysM domain - - - 0.00000000000000000000000004606 122.0
MMD1_k127_9938_9 - K07275 - - 0.000000000000000000000001697 111.0