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Overview

ID MAG04480
Name YHH1_bin.50
Sample SMP0121
Taxonomy
Kingdom Bacteria
Phylum Patescibacteriota
Class Minisyncoccia
Order UBA9973
Family UBA12088
Genus UBA12088
Species
Assembly information
Completeness (%) 95.47
Contamination (%) 7.06
GC content (%) 54.0
N50 (bp) 3,140
Genome size (bp) 1,278,175

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes986

Gene name Description KEGG GOs EC E-value Score Sequence
YHH1_k127_10044857_0 PFAM glycoside hydrolase, family 3 domain protein K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 387.0
YHH1_k127_10075478_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 316.0
YHH1_k127_10119622_0 Exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003529 278.0
YHH1_k127_10119622_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000001897 162.0
YHH1_k127_1012258_0 calcium- and calmodulin-responsive adenylate cyclase activity K12287 - - 0.000008543 58.0
YHH1_k127_10133461_0 PIN domain - - - 0.0000000000000000009509 93.0
YHH1_k127_10133461_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000003406 62.0
YHH1_k127_10169029_0 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000006573 159.0
YHH1_k127_10169029_1 Forms part of the polypeptide exit tunnel K02926 - - 0.00000000000000000000000000000000000002781 153.0
YHH1_k127_10169029_2 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000003768 68.0
YHH1_k127_10169029_3 exodeoxyribonuclease VII activity K03601 - 3.1.11.6 0.000127 51.0
YHH1_k127_10195497_0 SOS response associated peptidase (SRAP) - - - 0.000000000000000000000000000000000000000000000000000000000000000005513 232.0
YHH1_k127_10213762_0 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000003271 113.0
YHH1_k127_10213762_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000001319 81.0
YHH1_k127_10224597_0 Hydroxypyruvate reductase K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000001543 261.0
YHH1_k127_10224597_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000001893 251.0
YHH1_k127_10224597_2 COGs COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase K06182 - 5.4.99.21 0.00000000000000000000000000000000000000000000000000001665 199.0
YHH1_k127_10224597_3 SET domain K07117 - - 0.00000000000000000000000000000000000001071 149.0
YHH1_k127_10266287_0 phosphotransferase activity, for other substituted phosphate groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007057 297.0
YHH1_k127_10266287_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000002394 230.0
YHH1_k127_10303964_0 Glycosyl hydrolases family 15 K07190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005138 290.0
YHH1_k127_10303964_1 Immunoglobulin-like domain of bacterial spore germination - - - 0.000000000000000000000000000003139 133.0
YHH1_k127_10303964_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000001624 93.0
YHH1_k127_10332102_0 Glycosyltransferase 36 associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 432.0
YHH1_k127_10332102_1 Transposase and inactivated derivatives IS30 family - - - 0.000001185 57.0
YHH1_k127_10369098_0 PFAM DNA photolyase FAD-binding K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000007801 238.0
YHH1_k127_10395689_0 PFAM Bacterial regulatory protein, Fis family K07497 - - 0.0000000000000000000000000000000000000000000000000101 197.0
YHH1_k127_10414132_0 Belongs to the class-II aminoacyl-tRNA synthetase family K01880 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 359.0
YHH1_k127_10426133_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101 6.1.1.14 0.0000000000000000000000000000000000000000000000002421 180.0
YHH1_k127_10448381_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 571.0
YHH1_k127_10458222_0 type II secretion system protein E K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 395.0
YHH1_k127_10458222_1 twitching motility protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 317.0
YHH1_k127_10458222_2 PFAM Bacterial type II secretion system protein F domain K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000003329 250.0
YHH1_k127_10458222_3 response regulator - - - 0.000000000001644 73.0
YHH1_k127_10458222_4 general secretion pathway protein K02456,K02650 - - 0.00001748 50.0
YHH1_k127_10468113_0 WD40 repeats - - - 0.0000000000000000000000000000000000596 143.0
YHH1_k127_10499456_0 helicase activity - - - 0.000000000000000000000000008291 124.0
YHH1_k127_10499721_0 Transcriptional regulator, TrmB - - - 0.00000002491 64.0
YHH1_k127_10548809_0 MgtC family K07507 - - 0.00000000000000000000000000002351 122.0
YHH1_k127_10548809_1 PFAM ATP cone domain - - - 0.0000000000000000000000000000911 120.0
YHH1_k127_1055331_0 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000024 149.0
YHH1_k127_10587089_0 PFAM glutaredoxin - - - 0.0000000000000000000000000000000000000004674 164.0
YHH1_k127_10587089_1 VIT family - - - 0.0000000000000000000000000000000001739 139.0
YHH1_k127_10599652_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000002342 237.0
YHH1_k127_10599652_1 Penicillin-binding protein dimerisation domain K03587,K08384 - 3.4.16.4 0.0000000000000000000000000000000000000000001054 175.0
YHH1_k127_10599652_2 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000000001648 155.0
YHH1_k127_10599652_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000255 90.0
YHH1_k127_10670198_0 cysteine-tRNA ligase activity K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 444.0
YHH1_k127_10670198_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000005978 236.0
YHH1_k127_10670198_2 Mediates influx of magnesium ions K03284 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000001582 91.0
YHH1_k127_10691441_0 Belongs to the peptidase S8 family K01342,K14645 - 3.4.21.62 0.0008889 52.0
YHH1_k127_10693636_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000001918 231.0
YHH1_k127_10693636_1 Protein of unknown function (DUF2914) - - - 0.0000000000000000000000000000001249 131.0
YHH1_k127_10736167_0 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001878 272.0
YHH1_k127_10736167_1 TM2 domain - - - 0.0000000000000000001077 93.0
YHH1_k127_10750624_0 Dihydroorotate dehydrogenase K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 337.0
YHH1_k127_10750624_1 NYN domain - - - 0.0000143 51.0
YHH1_k127_10751218_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 316.0
YHH1_k127_10835027_0 PIN domain - - - 0.0000000000001 74.0
YHH1_k127_10842310_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000668 132.0
YHH1_k127_10873005_0 IS30 family K07482 - - 0.000000000000000000000000000000001137 142.0
YHH1_k127_10916714_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 3.442e-196 621.0
YHH1_k127_10916714_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.0000000000000000000000000000000000000000003651 166.0
YHH1_k127_10916714_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 0.000000000000000000259 92.0
YHH1_k127_10916714_3 DNA recombination-mediator protein A K04096 - - 0.000000000000000004379 88.0
YHH1_k127_10959684_0 DNA polymerase K02337 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008862 516.0
YHH1_k127_10962086_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000003045 215.0
YHH1_k127_10962086_1 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.0000000000000000000000000000000000003482 146.0
YHH1_k127_10962086_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000009165 103.0
YHH1_k127_10994068_0 Involved in initiation control of chromosome replication - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 344.0
YHH1_k127_1101709_0 mitochondrial electron transport, ubiquinol to cytochrome c K01412,K07263,K17732 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005750,GO:0005759,GO:0006091,GO:0006119,GO:0006122,GO:0006139,GO:0006163,GO:0006508,GO:0006605,GO:0006626,GO:0006627,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0016485,GO:0016787,GO:0017087,GO:0017144,GO:0019538,GO:0019637,GO:0019693,GO:0019866,GO:0022900,GO:0022904,GO:0023052,GO:0031090,GO:0031930,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031982,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0034982,GO:0042773,GO:0042775,GO:0042886,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045184,GO:0045275,GO:0045333,GO:0046034,GO:0046483,GO:0046872,GO:0046907,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0055086,GO:0055114,GO:0065007,GO:0070011,GO:0070013,GO:0070069,GO:0070469,GO:0070585,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072521,GO:0072594,GO:0072655,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:0140096,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 3.4.24.64 0.000000000000000000000000000000000000000000000000000001901 196.0
YHH1_k127_1101709_1 SurA N-terminal domain K03769 - 5.2.1.8 0.00008049 53.0
YHH1_k127_1118260_0 Sugar-specific transcriptional regulator TrmB - - - 0.00006789 49.0
YHH1_k127_116426_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000001028 152.0
YHH1_k127_116426_1 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000002841 123.0
YHH1_k127_116426_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000004797 105.0
YHH1_k127_116426_3 NUDIX domain K18445 - 3.6.1.61 0.0000000009967 69.0
YHH1_k127_116426_4 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0009201 45.0
YHH1_k127_1174636_0 -O-antigen - - - 0.00000000000000000000000000001219 136.0
YHH1_k127_1180985_0 TraM recognition site of TraD and TraG - - - 0.00000000000000000000000000000000000000000000001321 184.0
YHH1_k127_1184845_0 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.000000001434 72.0
YHH1_k127_118659_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 2.026e-248 782.0
YHH1_k127_118659_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 495.0
YHH1_k127_120225_0 PFAM Excinuclease ABC, C subunit domain protein K07461 - - 0.0001167 48.0
YHH1_k127_1211807_0 Integrase core domain K07482 - - 0.000000000000000000000000000000000000000904 160.0
YHH1_k127_1229049_0 UMP kinase activity K00947,K09903 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0030151,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 2.7.4.22 0.0000000000000000000000000000000000000000000000000000006428 200.0
YHH1_k127_1229049_1 addiction module antidote protein, CC2985 family K07746 - - 0.0002801 46.0
YHH1_k127_1229320_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate K03701 - - 1.497e-284 898.0
YHH1_k127_1229320_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 477.0
YHH1_k127_1250888_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000005659 65.0
YHH1_k127_1250888_1 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.000000009692 64.0
YHH1_k127_1250888_2 Prokaryotic N-terminal methylation motif - - - 0.0006424 50.0
YHH1_k127_1293213_0 Peptidase family M23 - - - 0.00000000000103 80.0
YHH1_k127_1293213_1 PFAM Peptidase M23 - - - 0.0003006 46.0
YHH1_k127_1296267_0 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 318.0
YHH1_k127_1296267_1 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000001651 179.0
YHH1_k127_1296267_2 SWIM zinc finger - - - 0.000005564 56.0
YHH1_k127_1315496_0 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000000147 141.0
YHH1_k127_1327039_0 PFAM malic K00027 - 1.1.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002978 286.0
YHH1_k127_1327039_1 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.000000000000000000000000000000000007215 144.0
YHH1_k127_1342043_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000007382 167.0
YHH1_k127_1342043_1 Tetratricopeptide repeat - - - 0.000002058 59.0
YHH1_k127_1359793_0 LAGLIDADG endonuclease - - - 0.000000000000001322 85.0
YHH1_k127_1361174_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005178 333.0
YHH1_k127_1419259_0 PFAM HhH-GPD family protein K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000002505 242.0
YHH1_k127_1419259_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000001703 234.0
YHH1_k127_1419259_2 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.0000000001107 67.0
YHH1_k127_1420906_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 369.0
YHH1_k127_1420906_1 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000001044 148.0
YHH1_k127_1420906_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000008137 125.0
YHH1_k127_1431135_0 - - - - 0.000000000000000000000000000000000000000000000001702 182.0
YHH1_k127_1431135_1 addiction module antidote protein, CC2985 family K07746 - - 0.0000005461 53.0
YHH1_k127_1440700_0 PFAM DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000002677 241.0
YHH1_k127_1450648_0 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000004959 61.0
YHH1_k127_145850_0 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.000000000000000000000000000003768 133.0
YHH1_k127_1470692_0 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003786 285.0
YHH1_k127_1470692_1 Protein of unknown function (DUF559) - - - 0.0003688 44.0
YHH1_k127_1496345_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000002918 57.0
YHH1_k127_1496345_1 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.0000005313 61.0
YHH1_k127_1503803_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000312 271.0
YHH1_k127_1518648_0 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000001069 190.0
YHH1_k127_1518648_1 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000001475 154.0
YHH1_k127_1518648_2 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000002014 91.0
YHH1_k127_1518648_3 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000002762 89.0
YHH1_k127_1567202_0 LAGLIDADG endonuclease - - - 0.0000000000000000000000000000000000000000000331 167.0
YHH1_k127_1567202_1 non supervised orthologous group - - - 0.000000000000000000000246 102.0
YHH1_k127_1567202_2 COG NOG15344 non supervised orthologous group - - - 0.00000002025 55.0
YHH1_k127_1586655_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 347.0
YHH1_k127_1590895_0 Domain of unknown function (DUF4215) - - - 0.000000001327 70.0
YHH1_k127_1632265_0 BRO family, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008979 387.0
YHH1_k127_1641390_0 3-beta hydroxysteroid dehydrogenase/isomerase family K08678 - 4.1.1.35 0.0000000002805 62.0
YHH1_k127_1641390_1 PFAM PKD domain containing protein K07004 - - 0.0002709 52.0
YHH1_k127_1651020_0 Magnesium chelatase, subunit ChlI K07391 - - 0.000000000000000000000000000000000000000000000000000000000001054 216.0
YHH1_k127_1651020_1 Transcriptional regulator, TrmB - - - 0.0000002046 61.0
YHH1_k127_1782817_0 von Willebrand factor (vWF) type A domain - - - 0.0000000000001881 83.0
YHH1_k127_1806815_0 Type IV secretory pathway, VirB4 - - - 0.00000000000000000000000000001286 128.0
YHH1_k127_1806815_1 - - - - 0.000000000000007534 83.0
YHH1_k127_1831270_0 aromatic amino acid beta-eliminating lyase threonine aldolase K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004943 287.0
YHH1_k127_1831270_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006326 282.0
YHH1_k127_1854334_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 - - 0.000000000000000000000319 108.0
YHH1_k127_1880899_0 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000006567 236.0
YHH1_k127_1880899_1 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000000000000000004573 159.0
YHH1_k127_1880899_2 Phosphoribosyl transferase domain - - - 0.00000000000000000616 94.0
YHH1_k127_1896408_0 PFAM transposase IS4 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 354.0
YHH1_k127_1906931_0 beta-lactamase domain protein K02238 - - 0.00000000000000000000000000000000000000000000000009831 187.0
YHH1_k127_1906931_1 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000004233 136.0
YHH1_k127_1908093_0 Transcriptional regulator, TrmB - - - 0.000000007829 64.0
YHH1_k127_1931687_0 Amino-transferase class IV K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 357.0
YHH1_k127_1931687_1 Belongs to the UPF0312 family - - - 0.0005356 50.0
YHH1_k127_1970768_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008195 542.0
YHH1_k127_1970768_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000001311 184.0
YHH1_k127_1970768_2 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000000000000000000008827 102.0
YHH1_k127_1970768_3 Ribosomal protein S1 K02945 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0003248 47.0
YHH1_k127_2017899_0 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000003588 213.0
YHH1_k127_2017899_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000007573 130.0
YHH1_k127_2085295_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000006238 160.0
YHH1_k127_2085295_1 Preprotein translocase SecG subunit K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.000000004025 60.0
YHH1_k127_2109573_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K01876,K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.12,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 379.0
YHH1_k127_2109573_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 372.0
YHH1_k127_2109573_2 ATP synthase delta (OSCP) subunit K02111 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000003492 271.0
YHH1_k127_2109573_3 GTP1/OBG - - - 0.0000000000000000000000000000000000000000005169 164.0
YHH1_k127_2109573_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00003865 49.0
YHH1_k127_2109573_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00008539 53.0
YHH1_k127_2203428_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 417.0
YHH1_k127_2203428_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006473 327.0
YHH1_k127_2203428_10 Transcription factor zinc-finger K09981 - - 0.0000000000003486 77.0
YHH1_k127_2203428_11 Smr domain - - - 0.000000000001744 71.0
YHH1_k127_2203428_2 Belongs to the helicase family. UvrD subfamily K10742 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 289.0
YHH1_k127_2203428_3 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000005169 164.0
YHH1_k127_2203428_4 Magnesium transport protein CorA K03284 - - 0.000000000000000000000000000000000000000008411 166.0
YHH1_k127_2203428_5 GtrA-like protein - - - 0.0000000000000000000000000000000000000003728 152.0
YHH1_k127_2203428_7 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000009234 126.0
YHH1_k127_2203428_8 PFAM peptidase M14, carboxypeptidase A - - - 0.00000000000000000000000001848 123.0
YHH1_k127_2203428_9 response to heat K03668,K03929 - - 0.00000000000000002238 87.0
YHH1_k127_2278503_0 oxidoreductase activity K00337,K03333,K04771,K07114 - 1.1.3.6,1.6.5.3,3.4.21.107 0.0000000001232 73.0
YHH1_k127_2296197_0 Alkyl hydroperoxide reductase K03387 - - 0.000000000000000000000000000000000000000000000000000000000000000001995 237.0
YHH1_k127_2296197_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0000287,GO:0000910,GO:0000921,GO:0000935,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022402,GO:0022607,GO:0030428,GO:0031106,GO:0032153,GO:0032155,GO:0032185,GO:0032506,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0045787,GO:0046872,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051258,GO:0051301,GO:0051726,GO:0065003,GO:0065007,GO:0070925,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000001874 136.0
YHH1_k127_2304947_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000003371 59.0
YHH1_k127_2304947_1 Immunoglobulin-like domain of bacterial spore germination - - - 0.00000005729 62.0
YHH1_k127_2329058_0 GDP-mannose 4,6 dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000008868 134.0
YHH1_k127_2329058_1 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000667 106.0
YHH1_k127_2342812_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000412 220.0
YHH1_k127_2342812_1 - - - - 0.00000000000000000000000000000000007132 143.0
YHH1_k127_2342812_2 - - - - 0.000019 51.0
YHH1_k127_235718_0 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000003624 62.0
YHH1_k127_2370437_0 Domain of unknown function (DUF4143) K07133 - - 0.000000000000000000000000000000000000000008752 160.0
YHH1_k127_2370437_1 Membrane K08984 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000002521 135.0
YHH1_k127_2374490_0 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 314.0
YHH1_k127_2374490_1 transposase activity K07483,K07497 - - 0.000000000000000472 89.0
YHH1_k127_2374490_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000004723 74.0
YHH1_k127_2403754_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000001612 135.0
YHH1_k127_2414907_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 496.0
YHH1_k127_2414907_1 Hydrolase, P-loop family K06925 - - 0.0000000000000000000003708 103.0
YHH1_k127_24211_0 metalloendopeptidase activity K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001043 268.0
YHH1_k127_24211_1 phosphoribosyl-ATP pyrophosphohydrolase - - - 0.000000000002403 72.0
YHH1_k127_243046_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000002714 134.0
YHH1_k127_243046_1 ParE toxin of type II toxin-antitoxin system, parDE K19092 - - 0.00000000000003564 78.0
YHH1_k127_243046_2 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000001654 68.0
YHH1_k127_243046_3 positive regulation of growth K07746 - - 0.000000001255 62.0
YHH1_k127_243046_4 rRNA binding K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000004553 55.0
YHH1_k127_243046_5 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0007936 44.0
YHH1_k127_2433224_0 Sodium/hydrogen exchanger family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000408 233.0
YHH1_k127_2487342_0 ATPase (AAA superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002368 276.0
YHH1_k127_2487342_1 DEAD-like helicases superfamily K07012 - - 0.0000000000000000000008776 103.0
YHH1_k127_2488595_0 PFAM glycoside hydrolase, family 1 K05350 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000002385 205.0
YHH1_k127_2488595_2 Transposase IS200 like - - - 0.00000000000000000001086 100.0
YHH1_k127_2503733_0 Raf kinase inhibitor-like protein, YbhB YbcL family K06910 - - 0.0000000000000000000000000000000000000000000000000000008951 199.0
YHH1_k127_2503733_1 Cytochrome b5-like Heme/Steroid binding domain - - - 0.00000000000002002 82.0
YHH1_k127_2503733_2 glutathione transferase activity - - - 0.000000000001419 70.0
YHH1_k127_2503733_3 DUF167 K09131 - - 0.0000008271 54.0
YHH1_k127_2503733_4 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.00009713 50.0
YHH1_k127_2544403_0 endonuclease exonuclease phosphatase - - - 0.0000000000000000000001231 107.0
YHH1_k127_2544403_1 protein conserved in bacteria - - - 0.000002368 59.0
YHH1_k127_2544403_2 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.000003771 58.0
YHH1_k127_2574210_0 6-phosphogluconolactonase K01057 - 3.1.1.31 0.00003207 54.0
YHH1_k127_2574477_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000001193 159.0
YHH1_k127_2574477_1 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000001963 106.0
YHH1_k127_2574477_2 PIN domain - - - 0.0000000000000000000004936 101.0
YHH1_k127_2574477_3 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000009939 84.0
YHH1_k127_2574477_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000001102 68.0
YHH1_k127_2574477_5 LAGLIDADG-like domain - - - 0.0000000004067 69.0
YHH1_k127_257503_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 423.0
YHH1_k127_2586475_0 Membrane protein insertase, YidC Oxa1 family K03217 - - 0.00000000000000000000002171 109.0
YHH1_k127_2586475_1 R3H domain protein K06346 - - 0.000000000000007149 81.0
YHH1_k127_2590871_0 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.0000000000000000000000000000000000000000000139 166.0
YHH1_k127_2590871_1 PFAM ComEC Rec2-related protein K02238 - - 0.00000000001112 69.0
YHH1_k127_2599782_0 PFAM type II secretion system K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004664 256.0
YHH1_k127_2599782_1 General secretion pathway protein K02454 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000002149 105.0
YHH1_k127_2636776_0 SNARE associated Golgi protein - - - 0.00000000000000000000000000000003894 132.0
YHH1_k127_2642583_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.0000000000000000000000000000000003203 144.0
YHH1_k127_2642583_1 'dna polymerase iii K02341 - 2.7.7.7 0.000000005758 66.0
YHH1_k127_2669300_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 446.0
YHH1_k127_2669534_0 COGs COG1432 conserved - - - 0.00000000000009228 78.0
YHH1_k127_2669534_1 PFAM Integrase catalytic region - - - 0.0003282 49.0
YHH1_k127_2710762_0 COG0477 Permeases of the major facilitator superfamily K08167 - - 0.0001648 53.0
YHH1_k127_2711401_0 Transketolase, pyrimidine binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 333.0
YHH1_k127_2711401_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003947 259.0
YHH1_k127_2711401_2 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001079 249.0
YHH1_k127_2711401_3 COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) K05770 - - 0.00000000000000000000000000000000000000002171 159.0
YHH1_k127_2711401_4 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000000002505 122.0
YHH1_k127_2711401_5 Protein of unknown function (DUF2721) - - - 0.0000000000000000000009711 100.0
YHH1_k127_2711401_6 Recombinase zinc beta ribbon domain - - - 0.0008041 47.0
YHH1_k127_275791_0 Pyridine nucleotide-disulphide oxidoreductase K00529 - 1.18.1.3 0.000000000000000000000000000000000002285 151.0
YHH1_k127_2767577_0 TIGRFAM DNA polymerase III, alpha subunit K02337,K14162 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 480.0
YHH1_k127_2793035_0 Belongs to the peptidase S8 family K01406 - 3.4.24.40 0.0000000005059 75.0
YHH1_k127_2793035_1 Conserved repeat domain - - - 0.0006007 55.0
YHH1_k127_2804789_0 Belongs to the glycosyl hydrolase family 6 K01081,K01179,K01183,K20276 - 3.1.3.5,3.2.1.14,3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000003852 250.0
YHH1_k127_2822259_0 Proton-conducting membrane transporter K12137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 437.0
YHH1_k127_2822259_1 PFAM NADH ubiquinone oxidoreductase, 20 - - - 0.00000000000000000000000000000000000000000000000003742 184.0
YHH1_k127_2826581_0 COG3385 FOG Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 427.0
YHH1_k127_2843677_0 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006814 436.0
YHH1_k127_2873357_0 PFAM Citrate transporter - - - 1.286e-195 618.0
YHH1_k127_2873357_1 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.000000000000000000815 91.0
YHH1_k127_2873357_2 cobalamin binding K03496,K22491 - - 0.000000000000001188 87.0
YHH1_k127_2873357_3 Psort location CytoplasmicMembrane, score - - - 0.00007255 53.0
YHH1_k127_2944513_0 Type I restriction enzyme R Protein K01153 - 3.1.21.3 0.000000000000000000000000000000000000000000000000000000000000000001459 246.0
YHH1_k127_2994439_0 Hypothetical methyltransferase K07755 - 2.1.1.137 0.0000007104 57.0
YHH1_k127_2994439_1 Bacterial extracellular solute-binding protein - - - 0.000004287 59.0
YHH1_k127_2994439_2 - - - - 0.0000161 53.0
YHH1_k127_3017175_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005836 301.0
YHH1_k127_3017175_1 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000006116 115.0
YHH1_k127_3073792_0 Beta propeller domain - - - 0.000000000000000000000000000000000000001915 163.0
YHH1_k127_3088230_0 SMART DEAD-like helicase K08282 - 2.7.11.1 0.000000000000000000000006013 117.0
YHH1_k127_3099012_0 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000002355 252.0
YHH1_k127_3099012_1 Rhodanese Homology Domain - - - 0.000000000000000000001571 102.0
YHH1_k127_3099012_2 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000003067 74.0
YHH1_k127_3099012_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000003183 56.0
YHH1_k127_3103315_0 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07665 - - 0.0000000000000000000000000000000000000000000000000000001102 202.0
YHH1_k127_3103315_1 protein histidine kinase activity K07636 - 2.7.13.3 0.00000000000000000000000000002147 131.0
YHH1_k127_3103315_2 protein kinase activity - - - 0.000000000001048 80.0
YHH1_k127_3103315_3 - - - - 0.000000000009932 76.0
YHH1_k127_3103315_4 - - - - 0.0001682 46.0
YHH1_k127_3108191_0 ATP cob(I)alamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000003139 84.0
YHH1_k127_3108191_1 ErfK YbiS YcfS YnhG family protein - - - 0.0000004377 61.0
YHH1_k127_3114674_0 PFAM Yqey-like protein K09117 - - 0.000000000000000000002689 99.0
YHH1_k127_3114674_1 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.0000000000000002009 84.0
YHH1_k127_3124399_0 Peptidase, M23 - - - 0.000000000000000000000000000000000000004871 160.0
YHH1_k127_3124399_1 Viral (Superfamily 1) RNA helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000002167 145.0
YHH1_k127_3168552_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 2.725e-195 634.0
YHH1_k127_3168552_1 Protease prsW family - - - 0.00001302 55.0
YHH1_k127_3169681_0 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000001417 104.0
YHH1_k127_3169681_1 2'-deoxycytidine 5'-triphosphate deaminase (DCD) K01494 - 3.5.4.13 0.00000000000000005732 86.0
YHH1_k127_3240600_0 alpha amylase catalytic K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 440.0
YHH1_k127_3240600_1 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 335.0
YHH1_k127_3240600_2 pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000359 289.0
YHH1_k127_3240600_3 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002992 275.0
YHH1_k127_3240600_4 Transposase DDE domain - - - 0.0000000000000000000000000000000000000000000000000000000000002658 214.0
YHH1_k127_3240600_5 Putative transposase of IS4/5 family (DUF4096) - - - 0.0000000000000000000000000001148 119.0
YHH1_k127_3245985_0 DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 448.0
YHH1_k127_3245985_1 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000002378 161.0
YHH1_k127_3245985_2 - - - - 0.00000001352 68.0
YHH1_k127_3305979_0 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000001696 104.0
YHH1_k127_3305979_1 methionine sulfoxide reductase K07305 - 1.8.4.12 0.000000000000001019 89.0
YHH1_k127_3354971_0 RmlD substrate binding domain K01784,K02473,K03274,K08678 - 4.1.1.35,5.1.3.2,5.1.3.20,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000366 252.0
YHH1_k127_3354971_1 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000000000000009556 183.0
YHH1_k127_3354971_2 methenyltetrahydrofolate cyclohydrolase activity - - - 0.00000000000000000001478 100.0
YHH1_k127_3375419_0 BRO family, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008241 330.0
YHH1_k127_3375419_1 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000001193 180.0
YHH1_k127_3375419_10 - - - - 0.0001081 48.0
YHH1_k127_3375419_11 - K07723 - - 0.0002844 47.0
YHH1_k127_3375419_2 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.000000000000000000000000000000000001648 141.0
YHH1_k127_3375419_3 GrpB protein - - - 0.000000000000000000000000000000006961 134.0
YHH1_k127_3375419_4 GDP-mannose mannosyl hydrolase activity K03574,K12944 - 3.6.1.55 0.00000000000000000000000000000007974 129.0
YHH1_k127_3375419_5 Protein of unknown function DUF86 K07075 - - 0.0000000000000000000001147 101.0
YHH1_k127_3375419_6 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K10778 - 2.1.1.63 0.000000000000000005537 86.0
YHH1_k127_3375419_7 Nucleotidyltransferase domain K07075 - - 0.000000000000001815 80.0
YHH1_k127_3375419_9 BRO family, N-terminal domain - - - 0.0000001626 53.0
YHH1_k127_3394733_0 Elongation factor G C-terminus K06207 GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840 - 6.017e-249 783.0
YHH1_k127_3394733_1 PFAM Type II secretion system protein E K02454 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 349.0
YHH1_k127_3394733_2 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000001324 201.0
YHH1_k127_3394733_3 Protein of unknown function (DUF421) - - - 0.000000000000001503 83.0
YHH1_k127_3394733_4 Psort location Cytoplasmic, score 9.97 - - - 0.00000000000002408 79.0
YHH1_k127_3394733_5 PFAM response regulator receiver K07659 - - 0.00000000000003236 77.0
YHH1_k127_3394733_6 Histidine kinase - - - 0.00001948 55.0
YHH1_k127_3394733_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00002265 56.0
YHH1_k127_3412414_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 498.0
YHH1_k127_3412414_1 Metal-sensitive transcriptional repressor - - - 0.000000000573 63.0
YHH1_k127_3412414_2 - - - - 0.0000007266 57.0
YHH1_k127_3412414_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000761 59.0
YHH1_k127_3458558_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000001411 198.0
YHH1_k127_3458558_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000008378 197.0
YHH1_k127_3458558_2 Belongs to the glycosyl hydrolase 1 family K05350 - 3.2.1.21 0.00000000000000000002618 94.0
YHH1_k127_3469198_0 cyclopropane-fatty-acyl-phospholipid synthase K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000001078 237.0
YHH1_k127_3469198_1 AAA domain K07133 - - 0.00000000000000000000000009204 116.0
YHH1_k127_3493479_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001548 284.0
YHH1_k127_3493479_1 Dihydroorotate dehydrogenase K00226 - 1.3.98.1 0.000000000000000000000000000000000008638 138.0
YHH1_k127_3493479_2 ABC transporter substrate binding protein - - - 0.0000004949 53.0
YHH1_k127_3498385_0 Cell shape determining protein, MreB Mrl family K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009618 357.0
YHH1_k127_3498385_1 helicase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003039 293.0
YHH1_k127_3499105_0 S23 ribosomal protein - - - 0.0000000000000000000003893 100.0
YHH1_k127_3499105_1 Phosphoglycerate mutase family K02226,K15634,K22305 - 3.1.3.3,3.1.3.73,5.4.2.12 0.0000000002467 64.0
YHH1_k127_3521019_0 Amino acid amide ABC transporter ATP-binding protein 1, HAAT family K01995 - - 0.000000000000000000000000000000000000000000000004208 180.0
YHH1_k127_3526951_0 PFAM RNA-directed DNA polymerase (Reverse transcriptase) K00986,K15342 - 2.7.7.49 0.000000000000000000000000000000000000000000000000000000000008742 227.0
YHH1_k127_3543479_0 Glycosyl hydrolases family 15 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 354.0
YHH1_k127_3563857_0 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001164 255.0
YHH1_k127_3577007_0 Dolichol kinase K18678 GO:0003674,GO:0003824,GO:0006066,GO:0006629,GO:0006720,GO:0006721,GO:0006766,GO:0006775,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009987,GO:0010189,GO:0010276,GO:0016101,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017144,GO:0018130,GO:0033306,GO:0034308,GO:0042360,GO:0042362,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1903173 2.7.1.182 0.00000000003807 70.0
YHH1_k127_3600563_0 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000006663 134.0
YHH1_k127_3600563_1 NERD domain protein - - - 0.00001174 55.0
YHH1_k127_3603320_0 Evidence 4 Homologs of previously reported genes of - - - 0.0000000007258 65.0
YHH1_k127_3603320_1 Belongs to the mannose-6-phosphate isomerase type 2 family K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000008111 53.0
YHH1_k127_3616424_0 Catalyzes the formation of phosphoenolpyruvate from pyruvate K00873 GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 406.0
YHH1_k127_3616424_1 Nucleotidyltransferase DNA polymerase involved in DNA repair K03502 - - 0.0000000000000000000000000000000000000000005879 164.0
YHH1_k127_3616424_2 Peptidase S24-like K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000008937 163.0
YHH1_k127_3616424_3 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.0000000000000000000000000002229 122.0
YHH1_k127_3616424_4 Peptidase family S49 K04773 - - 0.0000000000000000000000000006163 124.0
YHH1_k127_3616424_5 23S rRNA-intervening sequence protein - - - 0.00000000000000000000001569 105.0
YHH1_k127_3616424_6 Belongs to the peptidase S24 family K03503 - - 0.00000000003396 70.0
YHH1_k127_3616424_7 - - - - 0.00000005235 63.0
YHH1_k127_3622276_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 607.0
YHH1_k127_3682515_0 Belongs to the class I fructose-bisphosphate aldolase family K01623 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003728 312.0
YHH1_k127_3682515_1 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000008115 134.0
YHH1_k127_369308_0 Vitamin k epoxide reductase - - - 0.000000000000000000000000008583 115.0
YHH1_k127_369308_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000009413 91.0
YHH1_k127_369308_2 Required for disulfide bond formation in some proteins K03611 - - 0.00000000000000000604 91.0
YHH1_k127_3696567_0 PFAM Histidine triad (HIT) protein K02503 - - 0.00000000000000000000000000006484 121.0
YHH1_k127_3696567_1 Belongs to the peptidase S11 family K07262 GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000002792 82.0
YHH1_k127_3697957_0 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000004626 150.0
YHH1_k127_3697957_1 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000001069 117.0
YHH1_k127_3697957_2 murein transglycosylase K08305 - - 0.0007271 52.0
YHH1_k127_369891_0 SMART Fibronectin type III domain protein - - - 0.0000000000003748 81.0
YHH1_k127_3722413_0 Prokaryotic N-terminal methylation motif - - - 0.000000006495 68.0
YHH1_k127_3726314_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000001169 126.0
YHH1_k127_3726314_1 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.0000000243 59.0
YHH1_k127_3726314_2 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00003002 48.0
YHH1_k127_3755539_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 407.0
YHH1_k127_3755539_1 Glycosyl transferase family 2 K00721,K10012 - 2.4.1.83,2.4.2.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 338.0
YHH1_k127_3755539_2 GtrA-like protein - - - 0.000000009908 63.0
YHH1_k127_375787_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000584 102.0
YHH1_k127_375787_1 general secretion pathway protein G K02456 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.000001428 55.0
YHH1_k127_3762613_0 PFAM Integrase core domain - - - 0.00000000000000000002813 102.0
YHH1_k127_376718_0 COG3385 FOG Transposase and inactivated derivatives - - - 0.00000000000000000000004543 100.0
YHH1_k127_376718_1 NUDIX domain - - - 0.000000000000000000003298 99.0
YHH1_k127_376718_2 TIGRFAM adenylyl cyclase CyaB K05873 GO:0003674,GO:0003824,GO:0004016,GO:0009975,GO:0016829,GO:0016849 4.6.1.1 0.0000000002703 70.0
YHH1_k127_3767782_0 Belongs to the helicase family. UvrD subfamily K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 339.0
YHH1_k127_3786692_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 GO:0003674,GO:0003824,GO:0008113,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016667,GO:0016671,GO:0044419,GO:0051704,GO:0055114 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005889 300.0
YHH1_k127_3803894_0 Transport of potassium into the cell K03549 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 489.0
YHH1_k127_3803894_1 Region found in RelA / SpoT proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000003437 243.0
YHH1_k127_3803894_2 ATP-dependent Clp protease adaptor protein ClpS - - - 0.00000000000002711 78.0
YHH1_k127_3803894_3 Belongs to the peptidase S41A family K03797 GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016787,GO:0019538,GO:0023052,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.102 0.000000000009117 75.0
YHH1_k127_3803894_4 Orotate phosphoribosyltransferase K00762 GO:0003674,GO:0003824,GO:0004588,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019856,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046131,GO:0046132,GO:0046134,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.10 0.00004114 54.0
YHH1_k127_3803894_5 - - - - 0.00004207 51.0
YHH1_k127_3814397_0 pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 297.0
YHH1_k127_3814397_1 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.000000004794 64.0
YHH1_k127_3914800_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000001791 228.0
YHH1_k127_3914800_1 periplasmic or secreted lipoprotein - - - 0.00008505 48.0
YHH1_k127_3953384_0 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000003209 68.0
YHH1_k127_3953384_1 - - - - 0.0002817 44.0
YHH1_k127_3977959_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 GO:0003674,GO:0003824,GO:0008113,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016667,GO:0016671,GO:0044419,GO:0051704,GO:0055114 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 357.0
YHH1_k127_3977959_1 Peptidase S9, prolyl oligopeptidase - - - 0.000000000000000000000000000000000000000000002347 166.0
YHH1_k127_3977959_2 TfoX N-terminal domain - - - 0.000000000000000001174 92.0
YHH1_k127_4013979_0 ZIP Zinc transporter K16267 - - 0.000000000000000000000000002056 122.0
YHH1_k127_4013979_1 Belongs to the Fur family K09825 - - 0.000000000001978 76.0
YHH1_k127_4020355_0 Phenylacetic acid degradation operon negative regulatory protein PaaX K02616 - - 0.000000000008705 73.0
YHH1_k127_4020355_1 helicase K03655 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:1901360 3.6.4.12 0.00002545 50.0
YHH1_k127_4037265_0 Virulence-associated protein E - - - 0.00000000000000000000000000000000000000000000000000001372 207.0
YHH1_k127_4040488_0 Belongs to the UPF0312 family - - - 0.00000000000000000000003043 106.0
YHH1_k127_4040488_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 0.00000002666 55.0
YHH1_k127_4048476_0 Receptor family ligand binding region K01999 - - 0.00000000000000002972 92.0
YHH1_k127_4196995_0 Glycosyl transferase family group 2 K11936 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 383.0
YHH1_k127_4196995_1 Glycosyl transferase family group 2 K11936 - - 0.000000000000000000000000000000000000000000000000000001079 208.0
YHH1_k127_4196995_2 Glycoside-hydrolase family GH114 - - - 0.00000000000000000000000000000000000000000000000002034 190.0
YHH1_k127_4196995_3 Polysaccharide deacetylase - - - 0.00000000000000000000000001205 126.0
YHH1_k127_4196995_4 polysaccharide deacetylase K15531 - 3.2.1.156 0.0000000000002275 83.0
YHH1_k127_4209300_0 PFAM glycoside hydrolase 15-related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 545.0
YHH1_k127_4240261_0 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000002536 221.0
YHH1_k127_4240261_1 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.00000007454 61.0
YHH1_k127_4254576_0 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000001907 142.0
YHH1_k127_4258056_0 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000007061 201.0
YHH1_k127_4258056_1 endonuclease containing a URI domain K07461 - - 0.0000000000000000000000000000000000001576 144.0
YHH1_k127_4269260_0 Transposase IS200 like - - - 0.0000000000000000000000006691 110.0
YHH1_k127_4281306_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000001272 131.0
YHH1_k127_4281306_3 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000000000009535 85.0
YHH1_k127_4281306_4 Methyltransferase domain - - - 0.00000000000000009335 90.0
YHH1_k127_4281306_5 Prephenate dehydratase K04518 - 4.2.1.51 0.0000000000001128 81.0
YHH1_k127_4281306_6 PFAM Uncharacterised protein family UPF0102 K07460 - - 0.000000000002581 72.0
YHH1_k127_4281306_7 ATPase (AAA superfamily) K07133 - - 0.000001522 55.0
YHH1_k127_4305280_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 321.0
YHH1_k127_4305280_1 D-alanyl-D-alanine carboxypeptidase K07260 - 3.4.17.14 0.000000000000000000000002025 115.0
YHH1_k127_4311495_0 SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004856 404.0
YHH1_k127_4311495_1 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002348 252.0
YHH1_k127_4311495_2 Prephenate dehydratase K04518 - 4.2.1.51 0.00000000000000000000000000000000007235 142.0
YHH1_k127_4311495_3 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000007063 100.0
YHH1_k127_4311495_4 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000008418 55.0
YHH1_k127_4320925_0 Probable zinc-ribbon domain - - - 0.000000008918 61.0
YHH1_k127_4320925_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0004873 46.0
YHH1_k127_437506_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 565.0
YHH1_k127_437506_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 475.0
YHH1_k127_437506_2 Glu-tRNAGln amidotransferase C subunit K02435 - 6.3.5.6,6.3.5.7 0.00000695 52.0
YHH1_k127_437506_3 PHB depolymerase family esterase - - - 0.00001266 56.0
YHH1_k127_4382196_0 YceI-like domain - - - 0.00004462 58.0
YHH1_k127_4404718_0 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000000000000000000000000000000000003119 173.0
YHH1_k127_4404718_1 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000001284 72.0
YHH1_k127_4419807_0 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000002275 230.0
YHH1_k127_4419807_1 Domain present in PSD-95, Dlg, and ZO-1/2. K11749 - - 0.000000000000000000000000000000000000000000000000000007499 203.0
YHH1_k127_4419807_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000001339 184.0
YHH1_k127_4419807_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000942 168.0
YHH1_k127_4419807_4 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000001529 133.0
YHH1_k127_4419807_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000002984 111.0
YHH1_k127_4424891_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000002448 161.0
YHH1_k127_4424891_1 Methyltransferase domain - - - 0.000000000000000000117 93.0
YHH1_k127_4435205_0 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K00556,K03218,K03437 - 2.1.1.185,2.1.1.34 0.00000000000000000000000000000000001786 141.0
YHH1_k127_4469690_0 type II secretion system protein E K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 346.0
YHH1_k127_4469690_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000004586 127.0
YHH1_k127_4472422_0 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin K13274,K14645 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 362.0
YHH1_k127_4472422_1 membrane-bound metal-dependent - - - 0.0000000000000001041 89.0
YHH1_k127_4472422_2 Belongs to the peptidase S8 family - - - 0.000000002207 71.0
YHH1_k127_4482069_0 Domain of unknown function (DUF4143) K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000001509 238.0
YHH1_k127_4482069_1 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000002129 217.0
YHH1_k127_4482069_2 PFAM Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000009762 168.0
YHH1_k127_4482069_3 Sugar-specific transcriptional regulator TrmB - - - 0.000002486 59.0
YHH1_k127_4534504_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009397 441.0
YHH1_k127_4558209_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000007699 56.0
YHH1_k127_4558209_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000001831 56.0
YHH1_k127_4595148_0 amino acid abc transporter K01999 - - 0.000009178 50.0
YHH1_k127_4595148_1 Receptor family ligand binding region K01999 - - 0.0000106 57.0
YHH1_k127_4598749_0 DNA (cytosine-5-)-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006616 243.0
YHH1_k127_4598749_1 PFAM HNH endonuclease K07451 - - 0.00000004569 57.0
YHH1_k127_4598749_2 PLD-like domain - - - 0.0008797 51.0
YHH1_k127_4599637_0 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000456 93.0
YHH1_k127_4599637_1 Binds to the 23S rRNA K02939 - - 0.000000000000000001146 91.0
YHH1_k127_4599637_2 endonuclease I K01150 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005576,GO:0005623,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0016888,GO:0016893,GO:0019439,GO:0034641,GO:0034655,GO:0042597,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 3.1.21.1 0.0006313 48.0
YHH1_k127_4614350_0 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000001471 132.0
YHH1_k127_4614350_1 Two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.000006179 55.0
YHH1_k127_4633507_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000986 560.0
YHH1_k127_4686169_0 Receptor family ligand binding region K01999 - - 0.0000132 56.0
YHH1_k127_4686169_1 ATPases associated with a variety of cellular activities K01995 - - 0.0008264 43.0
YHH1_k127_4686415_0 NUDIX domain - - - 0.000000000000000000000000000000000002986 143.0
YHH1_k127_4686415_1 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000006095 144.0
YHH1_k127_4686415_2 Belongs to the UPF0109 family K06960 - - 0.00000000000001438 79.0
YHH1_k127_4686415_3 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000001088 72.0
YHH1_k127_4686415_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0005303 44.0
YHH1_k127_4689728_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 323.0
YHH1_k127_4689728_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000001745 130.0
YHH1_k127_4707083_0 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004941 263.0
YHH1_k127_4707083_1 plastoquinone (Complex I) K12137 - - 0.0000000000000000000000000000000000000000000001648 180.0
YHH1_k127_4707083_2 PFAM NADH Ubiquinone plastoquinone K12141 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0033554,GO:0044425,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - 0.00000000000000000000000000009488 122.0
YHH1_k127_4707083_3 hydrogenase 4 membrane K12140 - - 0.00000000000002935 81.0
YHH1_k127_4721840_0 Belongs to the helicase family. UvrD subfamily K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000003175 209.0
YHH1_k127_4749185_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 379.0
YHH1_k127_4749185_1 Eukaryotic phosphomannomutase - - - 0.0000000000000000000000000004885 122.0
YHH1_k127_4756644_0 - - - - 0.000002114 51.0
YHH1_k127_4778315_0 pfam abc K06158,K19350 - - 0.000000000000000000000000000000000000000000000000000003054 209.0
YHH1_k127_4778315_1 COG1278 Cold shock - - - 0.0000000000000001098 82.0
YHH1_k127_4778315_2 DNA gyrase topoisomerase IV, subunit A K02469 GO:0005575,GO:0005622,GO:0005623,GO:0009330,GO:0032991,GO:0044424,GO:0044464 5.99.1.3 0.00009942 49.0
YHH1_k127_483895_0 Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000112 263.0
YHH1_k127_483895_1 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000844 204.0
YHH1_k127_483895_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000004449 94.0
YHH1_k127_483895_3 - - - - 0.00001089 55.0
YHH1_k127_4848860_0 DNA N-6-adenine-methyltransferase (Dam) - - - 0.000000000000000000000000001881 116.0
YHH1_k127_4848860_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0003366 51.0
YHH1_k127_4878620_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008924 583.0
YHH1_k127_4878620_1 nucleic acid-binding protein contains PIN domain - - - 0.0000001174 59.0
YHH1_k127_4878620_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0004317 43.0
YHH1_k127_4900663_0 ATPase (AAA K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 369.0
YHH1_k127_4900663_1 PIN domain - - - 0.00000006609 57.0
YHH1_k127_490261_0 Alpha-2-Macroglobulin K06894 - - 0.0000000000000000000000000000000000000000000000000000001586 215.0
YHH1_k127_4905057_0 AAA domain - - - 0.000000000003754 77.0
YHH1_k127_4986333_0 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000002244 231.0
YHH1_k127_4998141_0 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000002259 207.0
YHH1_k127_4998141_1 PD-(D/E)XK nuclease superfamily - - - 0.0000000000001573 74.0
YHH1_k127_4998141_2 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000001493 54.0
YHH1_k127_5002155_0 - - - - 0.00000000000000000000000000000000000000000001289 168.0
YHH1_k127_5002155_1 DNA-binding transcription factor activity - - - 0.000000000000000000006871 98.0
YHH1_k127_5008247_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000005336 280.0
YHH1_k127_5020800_0 - - - - 0.00000000004626 77.0
YHH1_k127_5059089_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.0001577 53.0
YHH1_k127_5059089_2 radical SAM domain protein - - - 0.0003267 46.0
YHH1_k127_5059089_3 Glyco_18 - - - 0.0005623 44.0
YHH1_k127_5067267_0 COG0084 Mg-dependent DNase K03424 - - 0.00000000000000000000000000000004527 136.0
YHH1_k127_507111_0 PFAM aminotransferase, class I and II K00814 - 2.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008274 426.0
YHH1_k127_5086877_0 COG0513 Superfamily II DNA and RNA helicases K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 328.0
YHH1_k127_5086877_1 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000002146 233.0
YHH1_k127_5086877_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000002155 132.0
YHH1_k127_5086877_3 Protein of unknown function DUF45 K07043 - - 0.000000000000000000000000001715 121.0
YHH1_k127_5086877_4 PFAM Excinuclease ABC, C subunit domain protein K07461 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.0000000000000000000396 92.0
YHH1_k127_5101656_0 Penicillin-binding protein, transpeptidase domain protein K03587,K08384 - 3.4.16.4 0.000000000000000000000000000002283 128.0
YHH1_k127_512975_0 cell wall surface anchor family protein - - - 0.0000932 56.0
YHH1_k127_5148735_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000006194 203.0
YHH1_k127_5148735_1 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000004572 102.0
YHH1_k127_5148735_2 response regulator - - - 0.00000001544 65.0
YHH1_k127_520258_0 Reverse transcriptase-like K02226,K22316 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 0.0000000000000000000000000000000283 131.0
YHH1_k127_520258_1 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000007515 121.0
YHH1_k127_522521_0 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.00000000000007417 74.0
YHH1_k127_522521_1 Psort location Cytoplasmic, score - - - 0.0000000000001911 74.0
YHH1_k127_522521_2 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.000000000001633 70.0
YHH1_k127_5225665_0 R3H domain protein K06346 - - 0.0000000000005001 74.0
YHH1_k127_5225665_1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000001315 69.0
YHH1_k127_5226451_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 310.0
YHH1_k127_5247202_0 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 315.0
YHH1_k127_5247202_1 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000001988 108.0
YHH1_k127_5303672_0 Belongs to the Fur family K03711 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0008270,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010035,GO:0010038,GO:0010043,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0042221,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046872,GO:0046914,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.000000000004938 72.0
YHH1_k127_5310279_0 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000001189 157.0
YHH1_k127_5331505_0 LamG domain protein jellyroll fold domain protein K12567 - 2.7.11.1 0.0000001163 65.0
YHH1_k127_5361188_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000001317 144.0
YHH1_k127_5361188_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000331 114.0
YHH1_k127_5410542_0 Ferric reductase like transmembrane component - - - 0.00000000000000000000000000000000000000000000000000000000000002376 231.0
YHH1_k127_5410542_1 Belongs to the cytochrome b5 family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009527,GO:0009536,GO:0009707,GO:0009941,GO:0010319,GO:0016020,GO:0019867,GO:0031090,GO:0031967,GO:0031968,GO:0031969,GO:0031975,GO:0042170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0098588,GO:0098805 - 0.00000000000004648 83.0
YHH1_k127_5410542_2 Cytochrome b5-like Heme/Steroid binding domain - - - 0.000000000001601 78.0
YHH1_k127_5429973_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 370.0
YHH1_k127_5429973_1 Pfam:UPF0118 - - - 0.0003276 44.0
YHH1_k127_5441973_0 self proteolysis K09800,K11021,K13735 - - 0.000007854 58.0
YHH1_k127_5511929_0 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000001225 138.0
YHH1_k127_551382_0 TIGRFAM RHS repeat-associated core - - - 0.0000000000000000000000000000000000002156 154.0
YHH1_k127_5535295_0 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004918 275.0
YHH1_k127_5535295_1 PFAM Receptor family ligand binding region K01999 - - 0.0000000000000000000000000002005 129.0
YHH1_k127_5535295_2 ORF6N domain - - - 0.00000000000000000000000003317 109.0
YHH1_k127_555040_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.0000000000000000000000000000000000000000000000000000000000001597 219.0
YHH1_k127_555040_1 - - - - 0.000000000000000000000000000001829 127.0
YHH1_k127_556581_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000001065 236.0
YHH1_k127_5568480_0 Psort location Cytoplasmic, score 8.96 K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 385.0
YHH1_k127_5614455_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0000000000000000000000000000000000000000000000000000000001293 211.0
YHH1_k127_5625097_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 294.0
YHH1_k127_5625097_1 peptidase - - - 0.000000000000000000001424 104.0
YHH1_k127_5625097_2 Protein of unknown function (DUF3467) - - - 0.00001542 50.0
YHH1_k127_5693492_0 Sugar-specific transcriptional regulator TrmB - - - 0.000006107 54.0
YHH1_k127_5693492_1 Alpha amylase catalytic - - - 0.0001502 55.0
YHH1_k127_5743775_0 Beta propeller domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 392.0
YHH1_k127_5743775_1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 336.0
YHH1_k127_5743775_2 Heat shock 70 kDa protein K04043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 319.0
YHH1_k127_5743775_3 Nucleotidyltransferase DNA polymerase involved in DNA repair K03502 - - 0.000000000000000000000000000000000000000000003595 181.0
YHH1_k127_5743775_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000004074 86.0
YHH1_k127_5755670_0 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000696 353.0
YHH1_k127_5755670_1 rod shape-determining protein MreC K03570 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0043621,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944,GO:0071963 - 0.00000001979 65.0
YHH1_k127_5770658_0 Glycosyl hydrolases family 15 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003865 346.0
YHH1_k127_5770658_1 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000124 237.0
YHH1_k127_5770658_10 Bacterial toxin of type II toxin-antitoxin system, YafQ - - - 0.0000001373 56.0
YHH1_k127_5770658_11 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0003809 48.0
YHH1_k127_5770658_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000008501 160.0
YHH1_k127_5770658_3 Signal transduction histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000001237 159.0
YHH1_k127_5770658_4 Dienelactone hydrolase family - - - 0.000000000000000001821 100.0
YHH1_k127_5770658_5 Transcriptional regulator K07669 - - 0.000000000000000003638 89.0
YHH1_k127_5770658_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000001032 78.0
YHH1_k127_5770658_7 Peptidase_C39 like family - - - 0.000000004009 65.0
YHH1_k127_5770658_9 - - - - 0.0000001214 55.0
YHH1_k127_5778448_0 - - - - 0.00000000000000000000000000000000000000000000008581 178.0
YHH1_k127_5830958_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 420.0
YHH1_k127_5830958_1 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000001032 267.0
YHH1_k127_5830958_2 COG2518 Protein-L-isoaspartate carboxylmethyltransferase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000009153 213.0
YHH1_k127_5830958_3 Cysteine-rich secretory protein family - - - 0.0000000000000000000007926 105.0
YHH1_k127_5840345_0 phosphoesterase, dhha1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005177 247.0
YHH1_k127_5840345_1 Sodium/hydrogen exchanger family K03455 - - 0.00000000000000000000000000000000000000000000000000000000004916 220.0
YHH1_k127_5840345_2 PFAM Patatin K07001 - - 0.00000000000000000000000000000000000000000000000000007164 196.0
YHH1_k127_5840345_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000001731 175.0
YHH1_k127_5840345_4 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.0000000000000000000000003689 116.0
YHH1_k127_5840345_5 beta-lactamase activity K07126 - - 0.0000003984 57.0
YHH1_k127_5847038_0 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0006355,GO:0006508,GO:0006515,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008477 282.0
YHH1_k127_5847038_1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007414 268.0
YHH1_k127_5847038_2 Predicted membrane protein (DUF2177) - - - 0.0000000000000000000000000000000005625 136.0
YHH1_k127_5847038_3 Transposase - - - 0.0000000000000000007441 96.0
YHH1_k127_5847038_4 - - - - 0.0003245 43.0
YHH1_k127_5867481_0 nucleotide-excision repair K03702,K08999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008073 375.0
YHH1_k127_5881629_0 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 492.0
YHH1_k127_5881629_1 Glycosyltransferase, group 1 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006749 349.0
YHH1_k127_5881629_2 SecA preprotein cross-linking domain K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0001496 44.0
YHH1_k127_5886814_0 Cytochrome C biogenesis protein transmembrane region - - - 0.0000000000000000000000000000000005027 139.0
YHH1_k127_5886814_1 Biogenesis protein K02275,K09792,K17686 - 1.9.3.1,3.6.3.54 0.000000000006823 71.0
YHH1_k127_5901075_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009008 396.0
YHH1_k127_5913012_0 PFAM Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.000000000000000000000000000000000000000000000000000000001522 204.0
YHH1_k127_5930668_0 Belongs to the D-alanine--D-alanine ligase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 328.0
YHH1_k127_5930668_1 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000004958 121.0
YHH1_k127_5958899_0 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000002034 131.0
YHH1_k127_5958899_1 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000007041 98.0
YHH1_k127_5990071_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000006629 243.0
YHH1_k127_6050569_0 PFAM Magnesium chelatase, subunit ChlI K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 302.0
YHH1_k127_6050569_1 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000001749 55.0
YHH1_k127_6062618_0 Predicted membrane protein (DUF2339) - - - 0.000000000000000000001997 108.0
YHH1_k127_6062618_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.00001278 53.0
YHH1_k127_6066678_0 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000000000002047 103.0
YHH1_k127_6066678_1 Involved in the tonB-independent uptake of proteins K01406,K03641,K21449 - 3.4.24.40 0.00000001916 67.0
YHH1_k127_6066678_2 PFAM SpoVT AbrB like domain K07172 - - 0.0000001998 56.0
YHH1_k127_6082222_0 SNARE associated Golgi protein - - - 0.000000000000003016 79.0
YHH1_k127_6082222_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0001539 53.0
YHH1_k127_6083666_0 Protein of unknown function DUF86 - - - 0.00000000000000005085 85.0
YHH1_k127_6083666_1 Nucleotidyltransferase domain K07075 - - 0.00000000000009115 76.0
YHH1_k127_6130895_0 site-specific DNA-methyltransferase (adenine-specific) activity - - - 3.091e-262 842.0
YHH1_k127_6130895_1 Sugar-specific transcriptional regulator TrmB - - - 0.00003726 47.0
YHH1_k127_6134218_0 Protein of unknown function DUF86 - - - 0.00000000000000000000000008619 110.0
YHH1_k127_6134218_1 Nucleotidyltransferase domain - - - 0.0000005179 59.0
YHH1_k127_6150928_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 1.292e-204 664.0
YHH1_k127_6151409_0 Nickel-dependent hydrogenase K00436 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000002517 260.0
YHH1_k127_616444_0 ATPase (AAA K07478 - - 0.0000000000000000000000000000000000000000000002634 170.0
YHH1_k127_616444_1 nuclease activity - - - 0.00000000000001017 76.0
YHH1_k127_616444_2 SpoVT / AbrB like domain - - - 0.00000004599 63.0
YHH1_k127_617906_0 Integrase core domain protein - - - 0.0000000000000000000000000000000000000000000000000000000002434 212.0
YHH1_k127_617906_1 PFAM Plasmid maintenance system killer protein - - - 0.000000000000001213 79.0
YHH1_k127_617906_2 helix_turn_helix ASNC type K03719 - - 0.0000000006382 71.0
YHH1_k127_617995_0 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000009666 171.0
YHH1_k127_617995_1 Glycosyl transferases group 1 K13668 GO:0000009,GO:0000030,GO:0003674,GO:0003824,GO:0004376,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0033164,GO:0040007,GO:0043750,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0070085,GO:0071704,GO:0071944,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.346 0.0001814 51.0
YHH1_k127_6228283_0 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000000002288 78.0
YHH1_k127_6228283_1 Nucleotidyltransferase domain - - - 0.0000001925 57.0
YHH1_k127_6228283_2 Ribbon-helix-helix protein, copG family - - - 0.0000205 50.0
YHH1_k127_6228283_3 Protein of unknown function DUF86 K07076 - - 0.00004545 51.0
YHH1_k127_6249758_0 Pfam Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 331.0
YHH1_k127_6260317_0 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis - - - 0.0000000002229 68.0
YHH1_k127_6262344_0 SMART DEAD-like helicase K08282 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 441.0
YHH1_k127_6262344_1 Belongs to the CarB family K01955 GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 0.00000000000000002917 83.0
YHH1_k127_6302174_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000009834 254.0
YHH1_k127_6314292_0 Single Cache-like K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000001256 171.0
YHH1_k127_6314292_1 cheY-homologous receiver domain - - - 0.0000000000000001657 84.0
YHH1_k127_6351185_0 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 314.0
YHH1_k127_6351185_1 DEAD DEAH box helicase domain protein K06877 - - 0.0000000000000000000000000000000000001126 149.0
YHH1_k127_637124_0 Alpha-2-Macroglobulin K06894 - - 0.000000000000000000000000000002204 132.0
YHH1_k127_6429190_0 carboxypeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 316.0
YHH1_k127_6429190_1 - - - - 0.000000000000000000000000000000000000000000000000000000001112 214.0
YHH1_k127_6429190_2 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.000000000000000000000000000000000000000000001335 168.0
YHH1_k127_6429190_3 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000006989 121.0
YHH1_k127_6429190_4 - - - - 0.00000000000000000002445 95.0
YHH1_k127_6429190_5 STAS-like domain of unknown function (DUF4325) - - - 0.0000000000000000008793 91.0
YHH1_k127_6493445_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 362.0
YHH1_k127_6493445_1 TIGRFAM SUF system FeS assembly protein, NifU family K04488 - - 0.0000000000000000000000008727 108.0
YHH1_k127_6505157_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 387.0
YHH1_k127_6505157_1 Endonuclease I - - - 0.0000000000007352 81.0
YHH1_k127_6506619_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006029 495.0
YHH1_k127_6511664_0 Histidine kinase - - - 0.00001619 56.0
YHH1_k127_6511664_1 endonuclease activity - - - 0.0000197 50.0
YHH1_k127_6531585_0 STAS domain K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 307.0
YHH1_k127_6531585_1 PFAM CBS domain - - - 0.0000000000000001317 85.0
YHH1_k127_6574135_0 Trehalose utilisation - - - 0.0001856 53.0
YHH1_k127_6581456_0 TIGRFAM alpha-L-glutamate ligase-like protein - - - 0.0000000000000000000000000000000000000000000000002375 187.0
YHH1_k127_6581456_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642,K21688 - - 0.00000000000000000002946 97.0
YHH1_k127_6605880_0 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18589 - 1.5.1.3 0.000000001756 60.0
YHH1_k127_6612885_0 Domain of unknown function (DUF4143) K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 417.0
YHH1_k127_6612885_1 PFAM glycosyl transferase, family 51 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 421.0
YHH1_k127_6612885_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000003069 160.0
YHH1_k127_6617420_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000001873 177.0
YHH1_k127_6617420_1 Domain of unknown function K20276 - - 0.00001606 54.0
YHH1_k127_6630457_0 Putative glycosyl hydrolase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000008807 251.0
YHH1_k127_6630457_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000003239 207.0
YHH1_k127_6634003_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 513.0
YHH1_k127_6634003_1 116 kDa subunit K02123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003823 279.0
YHH1_k127_6634003_2 ATP synthase subunit C K02124 - - 0.000000000000000000000000000003734 125.0
YHH1_k127_6634003_3 ATP synthase (C/AC39) subunit K02119 - - 0.0000000000000000000000008537 116.0
YHH1_k127_6634003_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02122 - - 0.000000000008429 70.0
YHH1_k127_666212_0 Sugar transferase - - - 0.0000000000000000000000000000000000000000000168 179.0
YHH1_k127_666212_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000001156 144.0
YHH1_k127_6705187_0 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006165,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:1901360 2.7.4.6 0.0000000000000000000000000000000000000000000002316 176.0
YHH1_k127_678176_0 peptidase inhibitor activity K21449 - - 0.000005992 53.0
YHH1_k127_6806151_0 protocatechuate 3,4-dioxygenase - - - 0.0000007123 63.0
YHH1_k127_6806151_1 Sortase family K07284 - 3.4.22.70 0.00001662 55.0
YHH1_k127_6833785_0 helicase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 436.0
YHH1_k127_6889087_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000184 96.0
YHH1_k127_6889735_0 WD40 repeat, subgroup - - - 0.0000000000003468 83.0
YHH1_k127_6889735_1 IMG reference gene - - - 0.000000004898 63.0
YHH1_k127_6904034_0 Sugar-specific transcriptional regulator TrmB - - - 0.0000008829 59.0
YHH1_k127_6921062_0 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 362.0
YHH1_k127_6955294_0 Ribosomal protein L31 K02909 - - 0.00000000000000000000001899 102.0
YHH1_k127_6963585_0 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000002952 74.0
YHH1_k127_6981941_0 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000004396 188.0
YHH1_k127_6983667_0 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000003081 95.0
YHH1_k127_6983667_1 Glycosyl transferases group 1 - - - 0.00000000000001499 85.0
YHH1_k127_6983667_2 Glycosyl transferases group 1 - - - 0.000000000007304 77.0
YHH1_k127_6983667_3 Methyltransferase type 11 K20444 - - 0.00001581 48.0
YHH1_k127_7010910_0 Belongs to the glycosyl hydrolase family 6 K19668 - 3.2.1.91 0.000000000000001806 91.0
YHH1_k127_7025940_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 394.0
YHH1_k127_7025940_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000002022 66.0
YHH1_k127_7042984_0 Belongs to the PEP-utilizing enzyme family K01006,K01007 - 2.7.9.1,2.7.9.2 0.0000000000000003614 93.0
YHH1_k127_7077953_0 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001114 276.0
YHH1_k127_71004_0 PFAM RNA-directed DNA polymerase (Reverse transcriptase) K00986 - 2.7.7.49 0.000000000000000000000000000000000000000000000000000000000000000006333 237.0
YHH1_k127_71004_1 Protein of unknown function (DUF1653) - - - 0.000000009491 58.0
YHH1_k127_7144312_0 alpha amylase catalytic K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.0000000000000000000000000000000000000000000000000000000000005558 216.0
YHH1_k127_7194525_0 TIGRFAM YD repeat protein - - - 0.000000000000000000000000000000000002058 154.0
YHH1_k127_7197622_0 cell adhesion involved in biofilm formation - - - 0.0000007249 63.0
YHH1_k127_7197622_1 Belongs to the CDS family K00981 - 2.7.7.41 0.00006729 48.0
YHH1_k127_7312197_0 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000007191 111.0
YHH1_k127_7312197_1 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000007438 102.0
YHH1_k127_7312197_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00007977 49.0
YHH1_k127_732829_0 Filamentation induced by cAMP protein fic - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001062 271.0
YHH1_k127_732829_1 Protein of unknown function (DUF4065) - - - 0.00000000000000000000000000000000000009275 149.0
YHH1_k127_732829_2 Nuclease-related domain - - - 0.000000000000000000000004718 112.0
YHH1_k127_732829_3 COG0681 Signal peptidase I K13280 - 3.4.21.89 0.00000000000000003924 87.0
YHH1_k127_7352088_0 glutaredoxin-like protein, YruB-family - - - 0.00000000000000000005627 91.0
YHH1_k127_7352088_1 TIGRFAM MazG family protein K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.0005459 48.0
YHH1_k127_7368071_0 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.000000000000000000000000000000000000007664 148.0
YHH1_k127_7368071_1 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K10778 - 2.1.1.63 0.0000000000000006394 84.0
YHH1_k127_7368071_2 - K07723 - - 0.0000007937 54.0
YHH1_k127_7383000_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 5.386e-235 740.0
YHH1_k127_7385625_0 Belongs to the SEDS family K03588 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000001307 243.0
YHH1_k127_7385625_1 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000003975 221.0
YHH1_k127_7385625_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000001204 182.0
YHH1_k127_7419037_0 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000009769 173.0
YHH1_k127_7419037_1 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000006391 145.0
YHH1_k127_7419037_2 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000003661 120.0
YHH1_k127_7419037_3 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000005184 88.0
YHH1_k127_7448730_0 Transposase IS66 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000744 284.0
YHH1_k127_7448730_1 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000001111 199.0
YHH1_k127_7448730_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 0.0000000000000000000000000000000000000000000000945 184.0
YHH1_k127_7448730_3 Histidine triad (HIT) - - - 0.000000000000000000000000000000000000000000001165 168.0
YHH1_k127_7448730_4 transporter antisigma-factor antagonist STAS K03321 - - 0.000000000000000000000000000002939 122.0
YHH1_k127_7462316_0 - - - - 0.000006992 58.0
YHH1_k127_7513197_0 - - - - 0.00000000000000000000000729 117.0
YHH1_k127_7553662_0 - - - - 0.0000000000000000000000000001873 121.0
YHH1_k127_7623658_0 Asparagine synthase K01953 GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000001371 262.0
YHH1_k127_7623658_1 Polysaccharide biosynthesis protein - - - 0.00001148 53.0
YHH1_k127_7629198_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000006883 58.0
YHH1_k127_7753986_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 497.0
YHH1_k127_7763921_0 helix_turn_helix isocitrate lyase regulation - - - 0.0004807 51.0
YHH1_k127_7767962_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009193 344.0
YHH1_k127_7767962_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00006187 52.0
YHH1_k127_7781226_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 312.0
YHH1_k127_7781226_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000008861 222.0
YHH1_k127_7781226_2 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000003373 128.0
YHH1_k127_7781226_3 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000001817 108.0
YHH1_k127_7794058_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000002197 248.0
YHH1_k127_7809511_0 Phosphoribosyl transferase domain - - - 0.000000000000000000000000006569 121.0
YHH1_k127_7809511_1 Belongs to the peptidase S11 family K07262 - - 0.0000001685 62.0
YHH1_k127_7809511_2 Type IV pilus assembly protein PilM; K02662 - - 0.00005834 50.0
YHH1_k127_7926109_0 Cytochrome c biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000002171 168.0
YHH1_k127_7926109_1 Protein of unknown function (DUF541) K09807 - - 0.000000000009326 75.0
YHH1_k127_7937992_0 Peptidase S9, prolyl oligopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 520.0
YHH1_k127_7937992_1 membrane protein (homolog of Drosophila rhomboid) - - - 0.00000000000000000000000000000000000000000000000000000000006705 211.0
YHH1_k127_7937992_2 - - - - 0.0000000000000000000000000000000155 137.0
YHH1_k127_7937992_3 Short repeat of unknown function (DUF308) - - - 0.00000000000000000001599 100.0
YHH1_k127_7937992_4 tetR family K09017 - - 0.0000000003456 68.0
YHH1_k127_7937992_5 TfoX N-terminal domain - - - 0.0000000004698 64.0
YHH1_k127_7948695_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001183 289.0
YHH1_k127_7948695_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000307 269.0
YHH1_k127_7948695_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000001032 243.0
YHH1_k127_7948695_3 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000008761 221.0
YHH1_k127_7948695_4 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000002546 188.0
YHH1_k127_7948695_5 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000609 166.0
YHH1_k127_7957434_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000004423 270.0
YHH1_k127_7957434_1 Sulfate ABC transporter periplasmic sulfate-binding protein - - - 0.000000001132 70.0
YHH1_k127_7957434_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00002173 48.0
YHH1_k127_7970050_0 Beta-lactamase superfamily domain - - - 0.000000007143 62.0
YHH1_k127_7973884_0 CRISPR-associated protein, Csm1 family K07016 - - 0.00000000000000000000000000000000000000000000000000006304 211.0
YHH1_k127_7983153_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.00000000000000000000025 108.0
YHH1_k127_7984428_0 Aminotransferase class I and II K00814 - 2.6.1.2 0.00000000000000000000000000000000000000000000000000000666 193.0
YHH1_k127_7999585_0 PFAM DNA photolyase FAD-binding K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 404.0
YHH1_k127_7999585_1 ABC transporter, transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 317.0
YHH1_k127_7999585_2 helix_turn_helix, Lux Regulon K18286 - 3.5.4.40 0.000000000000001552 86.0
YHH1_k127_7999585_3 ABC transporter transmembrane region K06147,K11085 - - 0.000000000005037 67.0
YHH1_k127_8026975_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001691 289.0
YHH1_k127_8026975_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000003508 164.0
YHH1_k127_8026975_2 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.000000000000000000000000000000000001179 140.0
YHH1_k127_8026975_3 IS30 family K07482 - - 0.00000000000000000000000000000000001106 148.0
YHH1_k127_8026975_4 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.000000000000000000000000000001422 123.0
YHH1_k127_8026975_5 sulfotransferase activity K01014,K01016,K01025 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006805,GO:0006950,GO:0006952,GO:0008146,GO:0008150,GO:0008152,GO:0009410,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0016740,GO:0016782,GO:0042221,GO:0042742,GO:0043207,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0051923,GO:0070887,GO:0071466,GO:0098542 2.8.2.1,2.8.2.4 0.000000000000000000000001243 111.0
YHH1_k127_8026975_6 Protein of unknown function (DUF2283) - - - 0.00000005856 57.0
YHH1_k127_8026975_7 - K07485 - - 0.000004425 49.0
YHH1_k127_8031425_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 2.452e-269 853.0
YHH1_k127_8031425_1 RNA polymerase beta subunit external 1 domain K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.000000000000000000000000000000000000000000000000001226 185.0
YHH1_k127_8039329_0 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000001613 131.0
YHH1_k127_8039329_1 - - - - 0.00000000000000002059 92.0
YHH1_k127_8045097_0 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000001072 174.0
YHH1_k127_8045097_1 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000001131 56.0
YHH1_k127_8045097_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00007884 45.0
YHH1_k127_8046595_0 COG3209 Rhs family protein - - - 0.000000001893 70.0
YHH1_k127_8090914_0 Domain of unknown function (DUF389) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 304.0
YHH1_k127_8090914_1 HD domain K07023 - - 0.0000000000000000004091 94.0
YHH1_k127_8090914_2 - - - - 0.00000072 56.0
YHH1_k127_8098090_0 Domain of unknown function (DUF4143) K07133 - - 0.000000002 63.0
YHH1_k127_8128245_0 alpha-ribazole phosphatase activity K00768,K15634 - 2.4.2.21,5.4.2.12 0.00000000000000000001746 98.0
YHH1_k127_8136437_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 2.739e-206 662.0
YHH1_k127_8143947_0 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000005715 105.0
YHH1_k127_8149388_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000006891 57.0
YHH1_k127_8153808_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000001426 207.0
YHH1_k127_8153808_1 Domain of unknown function (DUF4143) K07133 - - 0.0000272 48.0
YHH1_k127_8160738_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 447.0
YHH1_k127_8160738_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000006846 100.0
YHH1_k127_8218314_0 TIGRFAM SUF system FeS cluster assembly, SufB K07033,K09014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 416.0
YHH1_k127_8235039_0 Addiction module K19157 - - 0.0000000000000000000000001802 108.0
YHH1_k127_8235039_1 RelB antitoxin - - - 0.00000000279 61.0
YHH1_k127_8236074_0 Bacterial protein of unknown function (DUF916) - - - 0.0006703 51.0
YHH1_k127_8242796_0 PFAM Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009218 274.0
YHH1_k127_8242796_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000493 261.0
YHH1_k127_8242796_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007401 246.0
YHH1_k127_8242796_3 ribosomal protein - - - 0.0000000000000000000000001462 110.0
YHH1_k127_8242796_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000001072 77.0
YHH1_k127_8242796_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K13888 - - 0.000000000002494 72.0
YHH1_k127_8253666_0 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000001766 184.0
YHH1_k127_8253666_1 Plasmid maintenance system killer K07334 - - 0.00006198 49.0
YHH1_k127_8253669_0 plastoquinone (Complex I) K12141 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004936 349.0
YHH1_k127_8253669_1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002097 269.0
YHH1_k127_8254818_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K09759 - 6.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005505 369.0
YHH1_k127_8254818_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 325.0
YHH1_k127_8254818_2 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000001138 161.0
YHH1_k127_8254818_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000006256 87.0
YHH1_k127_8345887_0 Fic family - - - 0.000000000000000000000000000000000000000000000000000000000000001285 228.0
YHH1_k127_8345887_1 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000006829 175.0
YHH1_k127_8345887_2 HflC and HflK could regulate a protease K04087 - - 0.000000005344 57.0
YHH1_k127_8345887_3 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.0000000639 57.0
YHH1_k127_8345887_4 - - - - 0.000000312 59.0
YHH1_k127_8355155_0 tRNA nucleotidyltransferase domain 2 putative K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000732 196.0
YHH1_k127_8385816_0 BRO family, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005366 364.0
YHH1_k127_8403683_0 BRO family, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007904 391.0
YHH1_k127_8403683_1 Inner membrane protein CreD K06143 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004707 297.0
YHH1_k127_8403683_2 Large family of predicted nucleotide-binding domains - - - 0.00000000000000000001713 95.0
YHH1_k127_8403683_3 nuclease activity - - - 0.00000000001576 66.0
YHH1_k127_8403683_4 PFAM SpoVT AbrB K07172,K18842 - - 0.000007034 51.0
YHH1_k127_8403683_5 response to nickel cation K07723 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0001727 48.0
YHH1_k127_8412607_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 436.0
YHH1_k127_8412607_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000008683 141.0
YHH1_k127_8412607_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000001483 116.0
YHH1_k127_8412607_4 Hydrolase, TatD family K03424 - - 0.000000000000000000003869 96.0
YHH1_k127_8412607_5 Belongs to the FtsK SpoIIIE SftA family K03466 - - 0.00000000000001334 76.0
YHH1_k127_8412607_6 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000001587 63.0
YHH1_k127_8412607_7 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.00002055 55.0
YHH1_k127_8421000_0 NUDIX domain - - - 0.0000005519 57.0
YHH1_k127_8425544_0 Belongs to the glycosyl hydrolase 43 family K15921 - 3.2.1.55 0.0002841 48.0
YHH1_k127_8425544_1 alginic acid biosynthetic process - - - 0.0004911 52.0
YHH1_k127_8437849_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000001873 208.0
YHH1_k127_8437849_1 HD domain K07023 - - 0.000000000000000000000000000000000000000000000000000000008345 205.0
YHH1_k127_8437849_2 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000000000003965 76.0
YHH1_k127_8482828_0 PFAM response regulator receiver K02483,K07667 - - 0.000000000002162 73.0
YHH1_k127_849410_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006928 365.0
YHH1_k127_8530892_0 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.00000000000000000000000000000000164 138.0
YHH1_k127_8530892_1 Thioredoxin-like K02199 - - 0.00000000000000009347 87.0
YHH1_k127_8538824_0 Histidine kinase - - - 0.00000000000000000000000000000118 130.0
YHH1_k127_8538824_1 histidine kinase HAMP region domain protein - - - 0.0000000000000000005553 100.0
YHH1_k127_8538824_2 PFAM Response regulator receiver domain - - - 0.000000000000000001138 93.0
YHH1_k127_8547908_0 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.0000002532 59.0
YHH1_k127_8558254_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 340.0
YHH1_k127_8574235_0 Leucine-rich repeats, typical (most populated) subfamily K19613 - - 0.00000000000000008031 88.0
YHH1_k127_8574235_1 Fibronectin type III domain protein K21571 - - 0.0000000002385 72.0
YHH1_k127_8631358_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 310.0
YHH1_k127_8631358_1 Fic/DOC family - - - 0.0000000000000000000000000000000000000000000000000000000000004656 224.0
YHH1_k127_8631358_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.0000000000000000000000000000000000000000000000000000003194 202.0
YHH1_k127_8631358_3 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.0000000000000000000003856 102.0
YHH1_k127_8631358_4 Ribosomal L28 family K02902 - - 0.000000004119 58.0
YHH1_k127_865941_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 GO:0002097,GO:0002098,GO:0002143,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 312.0
YHH1_k127_865941_1 Restriction endonuclease - - - 0.0000000000000000000000000000001615 129.0
YHH1_k127_865941_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000006021 89.0
YHH1_k127_8659739_0 Virulence protein RhuM family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 387.0
YHH1_k127_8659739_1 Ribosomal protein S9/S16 K02996 - - 0.0000000000000000000000000000003459 126.0
YHH1_k127_8659739_2 Ribosomal protein L17 K02879 - - 0.000000000000000000000004041 105.0
YHH1_k127_8659739_3 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000004719 79.0
YHH1_k127_8659739_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00009733 46.0
YHH1_k127_8725633_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 422.0
YHH1_k127_8725633_1 DNA recombination-mediator protein A K04096 - - 0.0000000000000000000000000000000000000000000000000000000001677 213.0
YHH1_k127_8752539_0 coenzyme F420-1:gamma-L-glutamate ligase activity K12234,K22099 - 6.3.2.12,6.3.2.17,6.3.2.31,6.3.2.34 0.00000000000000000000000000000000000000000000001286 180.0
YHH1_k127_8763743_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 307.0
YHH1_k127_8763743_1 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000007237 190.0
YHH1_k127_8763743_2 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000001835 141.0
YHH1_k127_8763743_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000003409 115.0
YHH1_k127_8763743_4 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000008257 110.0
YHH1_k127_8763743_5 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000005824 94.0
YHH1_k127_8763743_6 Binds to the 23S rRNA K02876 - - 0.0000000000001285 77.0
YHH1_k127_8843357_0 CRISPR-associated RAMP protein, Csm4 family K19139 - - 0.00000000000000000000000002489 121.0
YHH1_k127_8843357_1 Domain of unknown function (DUF1874) - - - 0.00000000000000000008506 92.0
YHH1_k127_8843357_2 RAMP protein, Csm5 K19140 - - 0.00001116 57.0
YHH1_k127_8911177_0 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000001852 204.0
YHH1_k127_8916340_0 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000003421 263.0
YHH1_k127_8926673_0 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016020,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0071944,GO:1990904 - 0.000000000000000000000003009 107.0
YHH1_k127_8926673_1 - - - - 0.00000008592 59.0
YHH1_k127_893026_0 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000152 252.0
YHH1_k127_893026_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0000000000000000000471 95.0
YHH1_k127_893026_2 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000001051 77.0
YHH1_k127_8935736_0 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000001335 277.0
YHH1_k127_8935736_1 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000000000000000000000001691 196.0
YHH1_k127_8935736_2 Alpha-2-Macroglobulin K06894 - - 0.000000000000000000000000001083 129.0
YHH1_k127_8948127_0 Domain of unknown function (DUF4143) K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002674 258.0
YHH1_k127_8988688_0 Membrane protein tms1 - GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005886,GO:0006575,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006658,GO:0006665,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0008150,GO:0008152,GO:0008324,GO:0008509,GO:0008514,GO:0008610,GO:0009058,GO:0009987,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015194,GO:0015318,GO:0015711,GO:0015804,GO:0015807,GO:0015825,GO:0015849,GO:0016020,GO:0016021,GO:0019637,GO:0022857,GO:0022889,GO:0030148,GO:0031090,GO:0031224,GO:0032329,GO:0034220,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046467,GO:0046486,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0098588,GO:0098655,GO:0098656,GO:0098805,GO:0098852,GO:1901564,GO:1901566,GO:1901576,GO:1902475,GO:1903825,GO:1905039 - 0.00000000001343 72.0
YHH1_k127_9060927_0 Transposase K07485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 389.0
YHH1_k127_9060927_1 Protein of unknown function (DUF3644) - - - 0.000008327 50.0
YHH1_k127_9083847_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000001492 251.0
YHH1_k127_909046_0 ribonucleoside-diphosphate reductase activity K00525,K21636 - 1.1.98.6,1.17.4.1 0.0000000000000000002561 95.0
YHH1_k127_909046_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02113,K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000002269 63.0
YHH1_k127_9097573_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 548.0
YHH1_k127_91847_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007976 344.0
YHH1_k127_91847_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000004763 219.0
YHH1_k127_9195519_0 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 331.0
YHH1_k127_9195519_1 nucleoside triphosphate catabolic process K01776,K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66,5.1.1.3 0.000000000000000000000000000000000000000000002006 170.0
YHH1_k127_9195519_2 Sugar-specific transcriptional regulator TrmB - - - 0.00000000000000000001355 102.0
YHH1_k127_9195519_3 phosphohydrolase - - - 0.0000000000001646 78.0
YHH1_k127_9195519_4 Sugar-specific transcriptional regulator TrmB - - - 0.000000000007485 75.0
YHH1_k127_9201026_0 Putative glucoamylase K13688 - - 1.447e-220 738.0
YHH1_k127_9204899_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.00000000000000000000000000000000001172 146.0
YHH1_k127_9211580_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 334.0
YHH1_k127_9211580_1 RmuC family K09760 - - 0.00000000000000000000000000000000000000000002661 174.0
YHH1_k127_9212406_0 Ribonucleotide reductase, barrel domain K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 527.0
YHH1_k127_9218034_0 Efflux ABC transporter permease protein - - - 0.000000000000000000000000000009193 133.0
YHH1_k127_9317093_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.6.5,3.1.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 433.0
YHH1_k127_9317093_1 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000005611 207.0
YHH1_k127_9329821_0 PFAM transposase, mutator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 446.0
YHH1_k127_9329821_1 Psort location Cytoplasmic, score - - - 0.00000000002603 63.0
YHH1_k127_933991_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 6.703e-196 637.0
YHH1_k127_933991_1 Metal-sensitive transcriptional repressor K21600 - - 0.00000000000000000002905 93.0
YHH1_k127_933991_2 PDZ domain (Also known as DHR or GLGF) K08372 GO:0000785,GO:0001101,GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005783,GO:0005789,GO:0005829,GO:0005856,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006979,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008219,GO:0008233,GO:0008236,GO:0008630,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009893,GO:0009894,GO:0009898,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010467,GO:0010506,GO:0010604,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010821,GO:0010822,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016485,GO:0016540,GO:0016787,GO:0017171,GO:0019222,GO:0019538,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030162,GO:0030163,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031329,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031984,GO:0032268,GO:0032270,GO:0032526,GO:0032991,GO:0033043,GO:0033554,GO:0033993,GO:0034097,GO:0034599,GO:0034605,GO:0035456,GO:0035458,GO:0035556,GO:0035631,GO:0042175,GO:0042221,GO:0042802,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043235,GO:0043280,GO:0043281,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045786,GO:0045862,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051082,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051336,GO:0051345,GO:0051604,GO:0051716,GO:0051726,GO:0052547,GO:0052548,GO:0060255,GO:0060548,GO:0065003,GO:0065007,GO:0065009,GO:0070011,GO:0070013,GO:0070206,GO:0070207,GO:0070848,GO:0070887,GO:0071229,GO:0071300,GO:0071310,GO:0071345,GO:0071363,GO:0071396,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0097190,GO:0097193,GO:0097194,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098802,GO:0098827,GO:0140096,GO:1900407,GO:1900408,GO:1901214,GO:1901215,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1901701,GO:1902175,GO:1902176,GO:1902494,GO:1902531,GO:1902532,GO:1902882,GO:1902883,GO:1903146,GO:1903201,GO:1903202,GO:1905286,GO:1905368,GO:1905369,GO:1905370,GO:2000116,GO:2001056,GO:2001233,GO:2001234,GO:2001235,GO:2001236,GO:2001238,GO:2001239,GO:2001241,GO:2001242,GO:2001243,GO:2001267,GO:2001269 - 0.00000003607 66.0
YHH1_k127_9348008_0 CHAP domain - - - 0.00000000000000000000000000000000000002757 148.0
YHH1_k127_936237_0 Virulence protein RhuM family - - - 0.00000000000000000000000000000000000000000000000000004423 190.0
YHH1_k127_936237_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.00000000000000000000000000003925 132.0
YHH1_k127_9368447_0 manually curated - - - 0.00000000000000000000000000000000000000000000000000000000002934 216.0
YHH1_k127_9368447_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000001722 70.0
YHH1_k127_9377220_0 PFAM transcriptional regulator TrmB - - - 0.0005072 51.0
YHH1_k127_9389367_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002351 273.0
YHH1_k127_9395132_0 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.000000000000000000000009563 104.0
YHH1_k127_9395132_3 Psort location Cytoplasmic, score K01493 - 3.5.4.12 0.0000002583 58.0
YHH1_k127_9395132_4 FtsZ-dependent cytokinesis - - - 0.000001236 61.0
YHH1_k127_941590_0 Type IV secretory pathway, VirB4 - - - 0.000000000000000000000000000000000000000000000000000000000000001119 231.0
YHH1_k127_9451112_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000001081 125.0
YHH1_k127_9451112_1 hydrolase activity, acting on ester bonds K01259 - 3.4.11.5 0.0000402 53.0
YHH1_k127_9460138_0 Protein of unknown function (DUF502) - - - 0.0002481 49.0
YHH1_k127_9466145_0 AAA domain K07133 - - 0.0000000000000000000000000000000000000000000574 165.0
YHH1_k127_9466145_1 TIGRFAM addiction module toxin, RelE StbE family - - - 0.00000000522 61.0
YHH1_k127_9466145_2 nuclease activity - - - 0.00002199 52.0
YHH1_k127_947836_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255,K01259 GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0097718,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1,3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004577 328.0
YHH1_k127_9500275_0 nUDIX hydrolase K08312 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019144,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872 - 0.000000000000000000000000000001874 127.0
YHH1_k127_9500275_1 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system - - - 0.00000000000000000000000003529 109.0
YHH1_k127_9500275_2 - - - - 0.000000000000000888 81.0
YHH1_k127_9500275_3 nUDIX hydrolase K08312 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019144,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872 - 0.00000000006606 64.0
YHH1_k127_9500275_5 MacB-like periplasmic core domain K02004 - - 0.000004785 48.0
YHH1_k127_9501933_0 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000008963 186.0
YHH1_k127_9501933_1 phosphoribosyl-ATP pyrophosphohydrolase - - - 0.000000000003732 73.0
YHH1_k127_9503827_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000016 151.0
YHH1_k127_9559076_0 Psort location Cytoplasmic, score - - - 0.000000000000000000002265 100.0
YHH1_k127_9576478_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000000000000000000000000000000000000000000000008093 191.0
YHH1_k127_9597660_0 CYTH domain K05873 - 4.6.1.1 0.0000000000000000000000001864 113.0
YHH1_k127_9597660_1 - - - - 0.000000000008718 71.0
YHH1_k127_9620503_0 PFAM NADH ubiquinone oxidoreductase, 20 - - - 0.000000000000000000000000000000000000002939 150.0
YHH1_k127_9620503_1 Carboxysome Shell Carbonic Anhydrase - - - 0.00000000000000000001755 104.0
YHH1_k127_9620503_2 - - - - 0.0000647 52.0
YHH1_k127_9641582_0 Domain of unknown function (DUF2341) - - - 0.000004462 61.0
YHH1_k127_9716169_0 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000284 207.0
YHH1_k127_9716169_1 TIGRFAM tyrosine recombinase XerD K03733,K04763 - - 0.0000000000000000000000008682 113.0
YHH1_k127_9716169_2 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000001865 96.0
YHH1_k127_9720447_0 SMART Nucleotide binding protein, PINc K07175 - - 4.079e-239 745.0
YHH1_k127_9720447_1 Bacterial capsule synthesis protein PGA_cap K04101,K05713,K06990,K07282 - 1.13.11.16,1.13.11.8 0.0000000000000000000000000001059 127.0
YHH1_k127_9770776_0 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000001559 218.0
YHH1_k127_9770776_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000002312 119.0
YHH1_k127_9770776_2 Chondroitinase B K01729 - 4.2.2.3 0.00007694 53.0
YHH1_k127_9832678_0 MafB19-like deaminase - - - 0.00000000000000000000000000000000000000000000000001942 190.0
YHH1_k127_9832678_1 HIT domain - - - 0.000000309 55.0
YHH1_k127_983831_0 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000004319 184.0
YHH1_k127_983831_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000006238 179.0
YHH1_k127_983831_2 Protein of unknown function (DUF1360) - - - 0.00000000000000229 83.0
YHH1_k127_9849036_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000001239 232.0
YHH1_k127_9849036_1 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000954 192.0
YHH1_k127_9849036_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000005396 173.0
YHH1_k127_9853023_0 Histidine kinase K07711 - 2.7.13.3 0.000000000000000000000000000000000000000002032 168.0
YHH1_k127_9880451_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000004 216.0
YHH1_k127_9891485_0 Bacterial PH domain - - - 0.00000000657 64.0
YHH1_k127_9891485_1 Glucose / Sorbosone dehydrogenase - - - 0.000000128 64.0
YHH1_k127_9917671_0 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000003183 196.0
YHH1_k127_9917671_1 Protein of unknown function (DUF3800) - - - 0.00000000000000000000000000000000000000329 153.0
YHH1_k127_9938366_0 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000003094 182.0
YHH1_k127_9954056_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 332.0
YHH1_k127_9954056_1 PFAM peptidase M50 - - - 0.00000000000000000000000000000000000000000003224 168.0
YHH1_k127_9954056_2 Radical SAM - - - 0.00000000000000000000001493 117.0
YHH1_k127_9969744_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000494 261.0
YHH1_k127_9969744_1 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000003941 132.0
YHH1_k127_9969744_2 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000001365 130.0
YHH1_k127_9969744_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000232 122.0
YHH1_k127_9969744_4 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000001549 73.0
YHH1_k127_9969744_5 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000006691 65.0
YHH1_k127_998674_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 317.0
YHH1_k127_998674_1 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000001058 87.0