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Overview

ID MAG04594
Name YHH3_bin.66
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Verrucomicrobiota
Class Verrucomicrobiia
Order Opitutales
Family Oceanipulchritudinaceae
Genus Oceanipulchritudo
Species
Assembly information
Completeness (%) 84.26
Contamination (%) 2.44
GC content (%) 59.0
N50 (bp) 4,436
Genome size (bp) 2,317,826

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2138

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_10013818_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 491.0
YHH3_k127_10013818_1 Two component, sigma54 specific, transcriptional regulator, Fis family K03974 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 408.0
YHH3_k127_10013818_2 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 376.0
YHH3_k127_10013818_3 Phage shock protein A K03969 GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006950,GO:0008150,GO:0008289,GO:0009266,GO:0009271,GO:0009408,GO:0009605,GO:0009607,GO:0009615,GO:0009628,GO:0009889,GO:0009898,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0019897,GO:0019898,GO:0031234,GO:0031323,GO:0031326,GO:0042802,GO:0043167,GO:0043168,GO:0043207,GO:0043433,GO:0044092,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0048519,GO:0050789,GO:0050794,GO:0050896,GO:0051090,GO:0051171,GO:0051252,GO:0051704,GO:0051707,GO:0060187,GO:0060255,GO:0065007,GO:0065009,GO:0071944,GO:0080090,GO:0098552,GO:0098562,GO:0098586,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000008424 243.0
YHH3_k127_10013818_4 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000009471 168.0
YHH3_k127_10013818_5 PspC domain protein K03973 - - 0.00000000000000000000000000000008846 128.0
YHH3_k127_1001687_0 Disulphide bond corrector protein DsbC K04084 - 1.8.1.8 4.55e-198 637.0
YHH3_k127_1001687_1 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000001905 154.0
YHH3_k127_1001687_2 PFAM Cyclic nucleotide-binding - - - 0.0000000002284 66.0
YHH3_k127_10095574_0 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 535.0
YHH3_k127_10095574_1 PFAM secretion protein HlyD family protein K01993 - - 0.0000000000000000000000000000000000000000000000004884 180.0
YHH3_k127_10161045_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1022.0
YHH3_k127_10161045_1 translation initiation factor activity - - - 0.00000000000002789 79.0
YHH3_k127_1016286_0 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000054 166.0
YHH3_k127_1016286_1 Belongs to the PdxA family K00097 - 1.1.1.262 0.000000000000000000000000000000001251 132.0
YHH3_k127_10164509_0 AraC-like ligand binding domain - - - 0.00000000000000000000000000000000000000000000000000008931 196.0
YHH3_k127_10164509_1 Protein of unknown function (DUF456) K09793 - - 0.000000000000000000000000000000000247 138.0
YHH3_k127_10164509_2 - - - - 0.000000000000000000007946 104.0
YHH3_k127_10164509_3 Converts the aldose L-fucose into the corresponding ketose L-fuculose K01818 - 5.3.1.25,5.3.1.3 0.000000004873 57.0
YHH3_k127_10178583_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 436.0
YHH3_k127_10178583_1 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000183 211.0
YHH3_k127_10199194_0 Ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 614.0
YHH3_k127_10199194_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 291.0
YHH3_k127_10199194_2 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000000000000000007088 196.0
YHH3_k127_10199194_3 DNA polymerase III K02340 - 2.7.7.7 0.000000000000000000000000000000000006962 143.0
YHH3_k127_10199194_4 Domain of unknown function (DUF4136) - - - 0.00000000000000000000007857 108.0
YHH3_k127_10199194_5 Domain of unknown function (DUF4136) - - - 0.0000000000000004524 85.0
YHH3_k127_10199194_6 - - - - 0.00000000001082 68.0
YHH3_k127_10199194_7 - - - - 0.00002173 48.0
YHH3_k127_10199194_8 Neurotransmitter-gated ion-channel ligand binding domain - - - 0.00005941 48.0
YHH3_k127_10207135_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1528.0
YHH3_k127_10207135_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 346.0
YHH3_k127_10216667_0 AcrB/AcrD/AcrF family K03296,K18138 - - 2.998e-252 788.0
YHH3_k127_10242589_0 serine protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 300.0
YHH3_k127_10248504_0 HlyD family secretion protein K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004126 411.0
YHH3_k127_10248504_1 PFAM outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 314.0
YHH3_k127_10248504_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000179 224.0
YHH3_k127_10271422_0 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000003126 268.0
YHH3_k127_10271422_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000008152 211.0
YHH3_k127_10271422_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.1.33 0.00000000000000000000000000000000000000000000004387 174.0
YHH3_k127_10291550_0 Fic/DOC family - - - 0.0000000000000000000000003515 106.0
YHH3_k127_10291550_2 Helix-turn-helix XRE-family like proteins K21498 - - 0.000000000001239 70.0
YHH3_k127_10291550_3 Protein of unknown function (DUF1593) - - - 0.000001522 51.0
YHH3_k127_10291550_4 Integrase core domain - - - 0.00001324 51.0
YHH3_k127_10298758_0 Ferrochelatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 404.0
YHH3_k127_10298758_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 310.0
YHH3_k127_10298758_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 310.0
YHH3_k127_10298758_3 Flavin containing amine oxidoreductase K06955 - - 0.000000000000000000000000000000000000000000000000000000000000000001953 239.0
YHH3_k127_10298758_4 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000004732 213.0
YHH3_k127_10298758_5 cytochrome C - - - 0.0000000000000000000000000000000000000000000000008748 184.0
YHH3_k127_10298758_6 LysE type translocator - - - 0.00000000000000000000000007831 114.0
YHH3_k127_10304091_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 4.101e-206 647.0
YHH3_k127_10304091_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004857 333.0
YHH3_k127_10304091_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000036 276.0
YHH3_k127_10304091_3 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002543 269.0
YHH3_k127_10304091_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000001918 214.0
YHH3_k127_10304091_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000001074 187.0
YHH3_k127_10304091_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000007447 177.0
YHH3_k127_10304091_7 Belongs to the SecE SEC61-gamma family K03073 - - 0.0000000000000000001547 91.0
YHH3_k127_10304091_8 recombinase activity - - - 0.00002656 46.0
YHH3_k127_10314932_0 Phage late control gene D protein (GPD) K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000007927 226.0
YHH3_k127_10316521_0 Pseudouridine synthase K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000001912 195.0
YHH3_k127_10316521_1 PFAM sigma 54 modulation protein ribosomal protein S30EA K05808 - - 0.00000000000000000000000000000003428 130.0
YHH3_k127_10316521_2 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000009286 87.0
YHH3_k127_1035207_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704 544.0
YHH3_k127_1035207_1 aldo keto reductase family K07079 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007213 471.0
YHH3_k127_1035207_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K15580 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006810,GO:0006811,GO:0006820,GO:0006857,GO:0006869,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010876,GO:0015711,GO:0015718,GO:0015721,GO:0015833,GO:0015849,GO:0015850,GO:0030288,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0042277,GO:0042597,GO:0042886,GO:0042939,GO:0044464,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0061077,GO:0071702,GO:0071705,GO:1900750 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 470.0
YHH3_k127_1035207_3 hemolysin-type calcium-binding region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006283 351.0
YHH3_k127_1035207_4 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.00000000000000000000000000000000000000000000001446 184.0
YHH3_k127_1035207_5 serine-type peptidase activity - - - 0.0000000000000000000000000000003261 143.0
YHH3_k127_1035207_6 Esterase PHB depolymerase - - - 0.0000000000000000000000000000009889 141.0
YHH3_k127_1036752_0 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 413.0
YHH3_k127_1036752_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 423.0
YHH3_k127_1036752_2 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001673 261.0
YHH3_k127_1036752_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000004932 238.0
YHH3_k127_1036752_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000000000000009648 157.0
YHH3_k127_1036752_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000001782 131.0
YHH3_k127_10375089_0 alpha-galactosidase K07407 - 3.2.1.22 1.305e-245 773.0
YHH3_k127_10375089_1 COG3119 Arylsulfatase A - - - 5.384e-231 722.0
YHH3_k127_10375089_2 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 503.0
YHH3_k127_10375089_3 PFAM TonB-dependent receptor plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000619 277.0
YHH3_k127_10375089_4 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000001276 207.0
YHH3_k127_10389468_0 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 316.0
YHH3_k127_10389468_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006581 270.0
YHH3_k127_10389468_2 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.0000000000000000000000001097 109.0
YHH3_k127_10395903_0 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 353.0
YHH3_k127_10395903_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000004843 186.0
YHH3_k127_10434179_0 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006015 422.0
YHH3_k127_10434179_1 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000001543 233.0
YHH3_k127_10434179_2 siderophore transport - - - 0.0000000000000463 80.0
YHH3_k127_10434179_3 COG2211 Na melibiose symporter and related K03292 - - 0.00000002771 59.0
YHH3_k127_10440058_0 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006578 561.0
YHH3_k127_10440058_1 Periplasmic binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 469.0
YHH3_k127_10444068_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.285e-267 836.0
YHH3_k127_10444068_1 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008258 569.0
YHH3_k127_10444068_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 372.0
YHH3_k127_10444068_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000003618 166.0
YHH3_k127_10444993_0 PFAM ATPase associated with various cellular activities AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005874 451.0
YHH3_k127_10444993_1 Protein of unknown function DUF58 - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 298.0
YHH3_k127_10459793_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009112 425.0
YHH3_k127_10459793_1 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001628 270.0
YHH3_k127_10459793_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000004102 243.0
YHH3_k127_10459793_3 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000000000001329 162.0
YHH3_k127_10459793_4 ORF6N domain - - - 0.0000000000000000000000000000000000000000002358 164.0
YHH3_k127_10478389_0 growth of symbiont in host cell K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 389.0
YHH3_k127_10478389_1 exporters of the RND superfamily K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001133 269.0
YHH3_k127_10488622_0 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 486.0
YHH3_k127_10488622_1 Biotin-requiring enzyme - - - 0.00000000000002274 81.0
YHH3_k127_10488622_4 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00001315 51.0
YHH3_k127_10494889_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K12257 - - 1.733e-258 823.0
YHH3_k127_10494889_1 exonuclease RecJ K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 436.0
YHH3_k127_10494889_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 415.0
YHH3_k127_10494889_3 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000007036 165.0
YHH3_k127_10494889_4 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.00000000000000000000006194 101.0
YHH3_k127_10522161_0 Subtilase family - - - 6.771e-226 722.0
YHH3_k127_10522815_0 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004666 447.0
YHH3_k127_10522815_1 Glycoside hydrolase, family 2 - - - 0.0000000000000000000000000009582 115.0
YHH3_k127_10568971_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002427 275.0
YHH3_k127_10568971_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000006952 172.0
YHH3_k127_10568971_2 Dihydrofolate reductase K00287 - 1.5.1.3 0.000000000000000000000000000000000000000004859 161.0
YHH3_k127_10591068_0 purine nucleotide biosynthetic process K02529,K03435,K05499 - - 0.000000000000000000000000000000000000000000000000000000004281 213.0
YHH3_k127_10591068_1 Sodium:solute symporter family - - - 0.000000000007597 67.0
YHH3_k127_10612905_0 - - - - 2.15e-288 898.0
YHH3_k127_10612905_1 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002381 261.0
YHH3_k127_10612905_2 myo-inosose-2 dehydratase activity K15652 - 4.2.1.118 0.00000000000000000000000000000000000000000000000000000000000000000879 233.0
YHH3_k127_10616896_0 hydroxylamine reductase activity K00528,K02287,K02641,K15511 GO:0005575,GO:0005622,GO:0005623,GO:0009579,GO:0016020,GO:0034357,GO:0042651,GO:0044424,GO:0044436,GO:0044464 1.14.13.208,1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008664 408.0
YHH3_k127_10616896_1 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000005455 163.0
YHH3_k127_10618459_0 WYL domain K13572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002037 289.0
YHH3_k127_10618459_1 - - - - 0.00000000000000000000000769 104.0
YHH3_k127_10618459_2 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000001222 59.0
YHH3_k127_10618459_3 FG-GAP repeat - - - 0.00000008725 61.0
YHH3_k127_10624951_0 L-aspartate oxidase K00278 - 1.4.3.16 3.765e-233 732.0
YHH3_k127_10624951_1 Aminotransferase class I and II - - - 5.665e-200 634.0
YHH3_k127_10624951_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000648 282.0
YHH3_k127_10624951_3 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009009 296.0
YHH3_k127_10629404_0 PFAM carbon starvation protein CstA K06200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 572.0
YHH3_k127_10629404_1 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 555.0
YHH3_k127_10629404_2 Deoxyguanosinetriphosphate triphosphohydrolase K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 469.0
YHH3_k127_10629404_3 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000001383 200.0
YHH3_k127_10629404_4 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000004078 172.0
YHH3_k127_10637037_0 Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008493 280.0
YHH3_k127_10637037_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000001498 279.0
YHH3_k127_10637037_2 Glycosyl transferase 4-like domain - - - 0.000000000000000000000001032 105.0
YHH3_k127_10637037_3 Belongs to the bacterial ribosomal protein bS18 family K02963 - - 0.0000000000003052 73.0
YHH3_k127_10637106_0 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 468.0
YHH3_k127_10665515_0 - - - - 5.761e-201 644.0
YHH3_k127_10672727_0 Mandelate racemase muconate lactonizing enzyme, N-terminal domain K01683,K01684 - 4.2.1.5,4.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000006659 250.0
YHH3_k127_10672727_1 transcriptional regulator AraC family - - - 0.000000000000000002893 96.0
YHH3_k127_1069615_0 Thermophilic metalloprotease (M29) K19689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008051 542.0
YHH3_k127_1069615_1 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007347 324.0
YHH3_k127_1069615_2 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000125 291.0
YHH3_k127_1069615_3 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001236 254.0
YHH3_k127_1069615_4 Inositol monophosphatase - - - 0.000000000000000003764 85.0
YHH3_k127_10718094_0 protein transport across the cell outer membrane K02453,K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 431.0
YHH3_k127_10718094_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008893 261.0
YHH3_k127_10718094_2 signal-transduction protein containing cAMP-binding and CBS K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000001215 258.0
YHH3_k127_10718094_3 RNA pseudouridylate synthase - - - 0.00000000000000000000000000000000000000003132 162.0
YHH3_k127_10718094_4 PFAM Exonuclease, RNase T and DNA polymerase III K02342 - 2.7.7.7 0.0000000000000000000000000000002026 131.0
YHH3_k127_10718094_5 PFAM Fimbrial assembly family protein - - - 0.0000000000001579 79.0
YHH3_k127_10718094_6 - - - - 0.00000001284 63.0
YHH3_k127_10718094_7 Binds directly to 16S ribosomal RNA K02968 - - 0.0002586 47.0
YHH3_k127_10741342_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01874 - 6.1.1.10 1.283e-221 697.0
YHH3_k127_10741342_1 Proteolipid membrane potential modulator - - - 0.00000000000001992 75.0
YHH3_k127_10741342_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000001807 57.0
YHH3_k127_10748049_0 TonB-dependent Receptor Plug Domain - - - 0.0 1154.0
YHH3_k127_10748049_1 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000564 165.0
YHH3_k127_10748049_2 - - - - 0.000000000000000000000000000000001918 130.0
YHH3_k127_10806377_0 COG3119 Arylsulfatase A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 430.0
YHH3_k127_10806377_1 alcohol dehydrogenase K11337 - 1.1.1.396 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 386.0
YHH3_k127_10806377_2 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 291.0
YHH3_k127_10813430_0 electron transport chain K00347,K03614 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 447.0
YHH3_k127_10813430_1 electron transport chain K02560,K03613,K10773 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0044464,GO:0055114,GO:0071944 2.3.1.243,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 339.0
YHH3_k127_10813430_2 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 319.0
YHH3_k127_10813430_3 FMN binding K03612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001344 258.0
YHH3_k127_10819724_0 pyruvate flavodoxin ferredoxin oxidoreductase K00169,K03737 - 1.2.7.1 0.00000000000000000000000121 117.0
YHH3_k127_10819724_1 Parallel beta-helix repeats - - - 0.000004792 57.0
YHH3_k127_10826062_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007934 483.0
YHH3_k127_10826062_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009369 476.0
YHH3_k127_10826062_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000002203 173.0
YHH3_k127_10826062_3 PIN domain K18828 - - 0.0000000000000000001913 94.0
YHH3_k127_10839237_0 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 2.239e-214 685.0
YHH3_k127_10839237_1 DNA polymerase III K02342 - 2.7.7.7 0.0000000000000000000000000000000000001576 147.0
YHH3_k127_10839237_2 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000001031 120.0
YHH3_k127_10908209_0 Belongs to the DegT DnrJ EryC1 family K12452 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 571.0
YHH3_k127_10908209_1 Polysaccharide biosynthesis protein K01709 - 4.2.1.45 0.0000000000000000000000385 102.0
YHH3_k127_10916796_0 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000007115 274.0
YHH3_k127_10916796_1 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000002871 70.0
YHH3_k127_1092355_0 Molecular chaperone. Has ATPase activity K04079 - - 3.28e-232 731.0
YHH3_k127_1092355_1 Competence protein ComEC K02238 - - 0.0003874 48.0
YHH3_k127_10926458_0 GHMP kinase, N-terminal domain protein - - - 3.097e-280 892.0
YHH3_k127_10926458_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 419.0
YHH3_k127_10926458_2 Domain of unknown function DUF21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 329.0
YHH3_k127_10926458_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000006515 175.0
YHH3_k127_10926458_4 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000002035 171.0
YHH3_k127_10926458_5 metal-dependent phosphohydrolase HD sub domain - - - 0.00000000000000000000000000001101 136.0
YHH3_k127_10926458_6 Response regulator receiver - - - 0.0000000000000000000001516 103.0
YHH3_k127_10926458_7 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000002466 59.0
YHH3_k127_10934343_0 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 - 1.6.5.3 7.215e-221 694.0
YHH3_k127_10934343_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 1.829e-206 647.0
YHH3_k127_10934343_2 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 2.533e-206 651.0
YHH3_k127_10934343_3 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000002822 224.0
YHH3_k127_10951534_0 Bacterial extracellular solute-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 526.0
YHH3_k127_10951534_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000006487 156.0
YHH3_k127_10951534_2 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000005605 93.0
YHH3_k127_1098207_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 9.667e-270 839.0
YHH3_k127_1098207_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006519 480.0
YHH3_k127_1098207_2 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.000000000000000000000000000000000000000000000000000000426 196.0
YHH3_k127_11039510_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003897 390.0
YHH3_k127_11052959_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 1.017e-237 744.0
YHH3_k127_11052959_1 Glyoxalase-like domain K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000000000000000000004262 210.0
YHH3_k127_11052959_2 Methylmalonyl-CoA mutase K01847,K03763,K14447 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016999,GO:0017144,GO:0019541,GO:0019678,GO:0019752,GO:0030312,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046459,GO:0071704,GO:0071944 2.7.7.7,5.4.99.2,5.4.99.63 0.0000000000000000000000000000000000000000000000000000000039 210.0
YHH3_k127_11071213_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.518e-281 878.0
YHH3_k127_11071213_1 phosphoribosylformylglycinamidine synthase K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 439.0
YHH3_k127_11110639_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 1.026e-294 914.0
YHH3_k127_11110639_1 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0008264 43.0
YHH3_k127_11113249_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 578.0
YHH3_k127_11113249_1 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000845 459.0
YHH3_k127_11113249_3 - - - - 0.000000000000009105 83.0
YHH3_k127_11130639_0 Sodium:neurotransmitter symporter family - - - 2.09e-224 710.0
YHH3_k127_11130639_1 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 407.0
YHH3_k127_11130639_3 PHP domain K04486 - 3.1.3.15 0.000000004335 58.0
YHH3_k127_11130639_4 Endonuclease/Exonuclease/phosphatase family - - - 0.00000001903 66.0
YHH3_k127_11132595_0 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 492.0
YHH3_k127_11132595_1 Belongs to the bacterial histone-like protein family K04764 - - 0.0000000000000000000000000000000000002261 143.0
YHH3_k127_11132595_2 Histidine kinase - - - 0.0000000000000000000000000000000004839 150.0
YHH3_k127_11132595_3 Beta-lactamase - - - 0.0007747 43.0
YHH3_k127_11134622_0 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 413.0
YHH3_k127_11134622_1 Phosphate-selective porin O and P K07221 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 358.0
YHH3_k127_11134622_2 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000000008337 120.0
YHH3_k127_11134628_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 445.0
YHH3_k127_11134628_1 PFAM ATP corrinoid adenosyltransferase BtuR CobO CobP K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000001549 186.0
YHH3_k127_11134628_2 Belongs to the GcvT family K06980 - - 0.000000000000002167 85.0
YHH3_k127_11139037_0 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000003254 91.0
YHH3_k127_11139037_1 Transposase - - - 0.000000004353 59.0
YHH3_k127_11139037_2 Necessary for formate dehydrogenase activity K02380 - - 0.00000004247 56.0
YHH3_k127_11154832_0 arylsulfatase A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007814 308.0
YHH3_k127_11154832_1 Glycosyl Hydrolase Family 88 - - - 0.000000000000000000000000000000000000000000000000000000000000000000007136 258.0
YHH3_k127_11154832_2 Transcriptional regulator K07726 - - 0.000000001982 64.0
YHH3_k127_11176325_0 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000001077 189.0
YHH3_k127_11176325_1 esterase - - - 0.00000000000000000000000000000000000000000101 166.0
YHH3_k127_11176325_2 NAD(P)-binding Rossmann-like domain K14257 - 1.14.19.49 0.0001815 45.0
YHH3_k127_11178840_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 305.0
YHH3_k127_11178840_1 Asparaginase, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000008887 208.0
YHH3_k127_11178840_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000003617 195.0
YHH3_k127_11178840_3 Type II secretion system K02653 - - 0.0000000001558 72.0
YHH3_k127_11228562_0 TonB-dependent receptor plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004103 494.0
YHH3_k127_11228562_1 Sodium:solute symporter family K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000635 273.0
YHH3_k127_11228562_2 HAD-hyrolase-like - - - 0.000000000000000000000000000000000000003472 154.0
YHH3_k127_11228562_3 thiamine pyrophosphokinase K00949 - 2.7.6.2 0.00000000000000000000001605 109.0
YHH3_k127_11252354_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 487.0
YHH3_k127_11252354_1 7TM receptor with intracellular HD hydrolase K07037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 491.0
YHH3_k127_11252354_10 - - - - 0.0000000000000000000000000000000001554 137.0
YHH3_k127_11252354_11 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm - - - 0.00000000000000000000001569 105.0
YHH3_k127_11252354_12 lipopolysaccharide binding K09774 - - 0.00000000000002784 81.0
YHH3_k127_11252354_2 Glycosyltransferase 36 associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 447.0
YHH3_k127_11252354_3 Aldo/keto reductase family - GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004033,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008076,GO:0008150,GO:0008152,GO:0009117,GO:0009898,GO:0009987,GO:0010959,GO:0012505,GO:0012506,GO:0015459,GO:0016020,GO:0016021,GO:0016192,GO:0016247,GO:0016491,GO:0016614,GO:0016616,GO:0019362,GO:0019637,GO:0019897,GO:0019898,GO:0030141,GO:0030424,GO:0030659,GO:0030667,GO:0031090,GO:0031224,GO:0031226,GO:0031234,GO:0031410,GO:0031982,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033267,GO:0034641,GO:0034702,GO:0034703,GO:0034705,GO:0034762,GO:0034765,GO:0035579,GO:0036230,GO:0042119,GO:0042581,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043266,GO:0043269,GO:0043299,GO:0043312,GO:0044224,GO:0044237,GO:0044238,GO:0044281,GO:0044304,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045055,GO:0045321,GO:0046483,GO:0046496,GO:0046903,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051179,GO:0051186,GO:0051234,GO:0055086,GO:0055114,GO:0060341,GO:0065007,GO:0065009,GO:0070820,GO:0070821,GO:0070995,GO:0071704,GO:0071944,GO:0072524,GO:0097458,GO:0097708,GO:0098552,GO:0098562,GO:0098588,GO:0098772,GO:0098796,GO:0098797,GO:0098805,GO:0099106,GO:0099503,GO:0120025,GO:0120038,GO:1901360,GO:1901379,GO:1901564,GO:1902495,GO:1903827,GO:1904062,GO:1990031,GO:1990351,GO:2000008 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 429.0
YHH3_k127_11252354_4 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 389.0
YHH3_k127_11252354_5 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000798 373.0
YHH3_k127_11252354_6 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 331.0
YHH3_k127_11252354_7 Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009893,GO:0009987,GO:0019216,GO:0019222,GO:0019747,GO:0031323,GO:0031325,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045828,GO:0045834,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0065007,GO:0071704,GO:0080090,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003079 264.0
YHH3_k127_11252354_8 HIT domain K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000000000000001161 204.0
YHH3_k127_11252354_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000009876 186.0
YHH3_k127_11257732_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 380.0
YHH3_k127_11257732_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 317.0
YHH3_k127_11257732_2 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000001632 233.0
YHH3_k127_11257732_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000004367 57.0
YHH3_k127_11268223_0 Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP) K00209 - 1.3.1.44,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008174 513.0
YHH3_k127_11268223_1 HAD-hyrolase-like K01838 - 5.4.2.6 0.00000000000000000000000000000000000000000000000000000000000003373 221.0
YHH3_k127_11268223_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.000000000000000000000000000000000000000000000000000000001661 207.0
YHH3_k127_11322922_0 arylsulfatase activity K01137,K01138 - 3.1.6.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 414.0
YHH3_k127_11322922_1 Pectate lyase superfamily protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 372.0
YHH3_k127_11322922_2 purine nucleotide biosynthetic process K02529,K03435,K05499 - - 0.000000000000000000000000000000000000000000000000000002339 202.0
YHH3_k127_11326454_0 TIGRFAM The (Largely Gram-negative Bacterial) Hydrophobe Amphiphile Efflux-1 (HAE1) Family K03296,K18138 - - 1.4e-273 847.0
YHH3_k127_1136769_0 Na H antiporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 401.0
YHH3_k127_1136769_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 328.0
YHH3_k127_1136769_2 deaminase - - - 0.00000000000000000000000000000000000000000000000000000001163 203.0
YHH3_k127_1136769_3 biopolymer transport protein - - - 0.0000000000000000000004974 100.0
YHH3_k127_11405574_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 1.088e-279 871.0
YHH3_k127_11405574_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 432.0
YHH3_k127_11405574_2 N-acetylmuramoyl-L-alanine amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001938 269.0
YHH3_k127_11405574_3 Rhomboid family - - - 0.0000000000000000000000000000000002045 141.0
YHH3_k127_11405574_4 Domain of unknown function (DUF4212) - - - 0.000000000000000000000000001638 115.0
YHH3_k127_11427301_0 regulation of translation K03530,K04764 - - 0.000000000000000000000000000000003092 132.0
YHH3_k127_11427301_1 HlyD family secretion protein K01993 - - 0.00000000000000000000000000000002018 137.0
YHH3_k127_11427301_2 Molybdopterin converting factor, small subunit K03636 - - 0.000000000000000000000000321 111.0
YHH3_k127_11444782_0 reductase 4Fe-4S - - - 2.863e-211 666.0
YHH3_k127_11444782_1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00262 - 1.4.1.4 0.0000000000000000000000000000000000000788 144.0
YHH3_k127_11444782_2 Gamma-glutamyl cyclotransferase, AIG2-like K19761 GO:0003674,GO:0003824,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0016829,GO:0016840,GO:0016842,GO:0042219,GO:0061929,GO:0071704,GO:1901564,GO:1901565,GO:1901575 - 0.000000000004991 72.0
YHH3_k127_11464260_0 symporter activity K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 604.0
YHH3_k127_11486229_0 helix_turn _helix lactose operon repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 512.0
YHH3_k127_11486229_1 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 467.0
YHH3_k127_11486229_2 PIN domain - - - 0.000000000000000000000000000000000000662 143.0
YHH3_k127_11517914_0 PFAM glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 365.0
YHH3_k127_11517914_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 340.0
YHH3_k127_11517914_2 - - - - 0.00000000000000000000000000000000000000000000000000002661 211.0
YHH3_k127_11569161_0 DNA photolyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 526.0
YHH3_k127_11569161_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 431.0
YHH3_k127_11569161_10 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000000000003109 150.0
YHH3_k127_11569161_11 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000003157 148.0
YHH3_k127_11569161_12 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000002859 141.0
YHH3_k127_11569161_13 Biopolymer transporter TonB K03832 - - 0.00000000000000000000000000003808 124.0
YHH3_k127_11569161_14 Sulfotransferase family - - - 0.000000000000000001497 95.0
YHH3_k127_11569161_15 Protein of unknown function (DUF3450) - - - 0.00000000000001399 79.0
YHH3_k127_11569161_2 TIGRFAM signal peptide peptidase SppA, 67K type K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 387.0
YHH3_k127_11569161_3 MotA/TolQ/ExbB proton channel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 312.0
YHH3_k127_11569161_4 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 294.0
YHH3_k127_11569161_5 NMT1/THI5 like K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 293.0
YHH3_k127_11569161_6 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001569 269.0
YHH3_k127_11569161_7 Pfam:DUF59 - - - 0.000000000000000000000000000000000000000000000000000001108 198.0
YHH3_k127_11569161_8 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000009987 182.0
YHH3_k127_11569161_9 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000003349 176.0
YHH3_k127_1161861_0 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000001537 250.0
YHH3_k127_1161861_1 spore germination - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000001072 160.0
YHH3_k127_11621488_0 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006497 451.0
YHH3_k127_11621488_1 Uroporphyrinogen decarboxylase (URO-D) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009911 386.0
YHH3_k127_11621488_2 COG2207 AraC-type DNA-binding domain-containing K02855 - - 0.00000000000000000000000000000000000001125 154.0
YHH3_k127_11651664_0 Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 505.0
YHH3_k127_11651664_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000891 252.0
YHH3_k127_11651664_2 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000333 156.0
YHH3_k127_11744017_0 Polynucleotide adenylyltransferase K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 431.0
YHH3_k127_11744017_1 cellulase activity K01727,K01729,K14274,K20276,K20951,K20952 - 4.2.2.1,4.2.2.3 0.00000005813 64.0
YHH3_k127_11752132_0 Serine threonine protein kinase K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001144 310.0
YHH3_k127_11752132_1 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000001662 192.0
YHH3_k127_11752132_2 carboxylic acid catabolic process - - - 0.000000000000000000000000000000000000000000000000002742 189.0
YHH3_k127_11752132_3 Dehydrogenase K02030,K03810 - - 0.00000000000000000000000000000000000000000001744 175.0
YHH3_k127_11752132_4 Leucine-rich repeat (LRR) protein K13730,K13731 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030260,GO:0030312,GO:0035635,GO:0044403,GO:0044409,GO:0044419,GO:0044464,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0071944 - 0.00000000000001358 86.0
YHH3_k127_11752132_5 - - - - 0.00000007638 64.0
YHH3_k127_11799245_0 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 574.0
YHH3_k127_11799245_1 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 487.0
YHH3_k127_11799245_2 Carbohydrate esterase, sialic acid-specific acetylesterase - - - 0.00000000000000000000000000735 115.0
YHH3_k127_11810121_0 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 317.0
YHH3_k127_11810121_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus - - - 0.000000000000000000000007712 106.0
YHH3_k127_11810121_2 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000000000148 91.0
YHH3_k127_11810121_3 PFAM YcfA family protein - - - 0.0000000000006844 68.0
YHH3_k127_11823078_0 Protein of unknown function (DUF2891) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002428 257.0
YHH3_k127_11823078_1 COG2755 Lysophospholipase L1 and related K10804 - 3.1.1.5 0.000000000000000000000000000000000006379 139.0
YHH3_k127_11823078_2 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000007684 73.0
YHH3_k127_11823078_3 polysaccharide catabolic process K01179 - 3.2.1.4 0.00000284 54.0
YHH3_k127_11825929_0 Phosphotriesterase family K07048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000643 285.0
YHH3_k127_11825929_1 PIN domain - - - 0.000000000000000000000000000002127 127.0
YHH3_k127_11825929_2 FecR protein - - - 0.00000000000000001694 93.0
YHH3_k127_11825929_3 Bacterial antitoxin of type II TA system, VapB - - - 0.000000000000001587 78.0
YHH3_k127_11825929_4 Heparinase II/III-like protein - - - 0.00000000002901 77.0
YHH3_k127_11916771_0 PAS fold - - - 0.0000000000000000000000000000000000000000000002327 181.0
YHH3_k127_11916771_1 response regulator receiver K13041 - - 0.000000000000000000000000000000000000000000009189 170.0
YHH3_k127_11916771_2 - - - - 0.0000000000002914 76.0
YHH3_k127_11917259_0 Penicillin binding protein transpeptidase domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 543.0
YHH3_k127_11917259_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 475.0
YHH3_k127_11917259_10 Belongs to the MraZ family K03925 - - 0.0000000000000000000002104 102.0
YHH3_k127_11917259_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 452.0
YHH3_k127_11917259_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 335.0
YHH3_k127_11917259_4 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 330.0
YHH3_k127_11917259_5 S4 RNA-binding domain K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006847 282.0
YHH3_k127_11917259_6 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000006265 235.0
YHH3_k127_11917259_7 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000003695 164.0
YHH3_k127_11917259_8 Domain of unknown function (DUF374) K09778 - - 0.0000000000000000000000000004646 122.0
YHH3_k127_11940601_0 Glycoside hydrolase family 3 K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000005846 266.0
YHH3_k127_11940601_1 Haloacid dehalogenase-like hydrolase - - - 0.000000000000001678 83.0
YHH3_k127_11973341_0 Integrase core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 394.0
YHH3_k127_11973341_1 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000002238 180.0
YHH3_k127_11973341_2 Transposase K07497 - - 0.000000000000000000000000000006658 121.0
YHH3_k127_11973341_3 COG1943 Transposase and inactivated derivatives - - - 0.0000000000000001057 83.0
YHH3_k127_12049997_0 phosphoenolpyruvate-dependent sugar phosphotransferase system K02768,K02769,K02770 - 2.7.1.202 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 557.0
YHH3_k127_12049997_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 364.0
YHH3_k127_12049997_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 357.0
YHH3_k127_12049997_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000002008 199.0
YHH3_k127_12049997_4 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000209 185.0
YHH3_k127_1205290_0 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 347.0
YHH3_k127_1205290_1 PFAM peptidase U32 K08303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006765 270.0
YHH3_k127_12062421_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000004925 229.0
YHH3_k127_12074588_0 D-isomer specific 2-hydroxyacid dehydrogenase K03778 GO:0000166,GO:0003674,GO:0003824,GO:0004457,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006067,GO:0006082,GO:0006083,GO:0006089,GO:0006090,GO:0006091,GO:0006103,GO:0006105,GO:0006113,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008720,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0015942,GO:0015980,GO:0016491,GO:0016614,GO:0016616,GO:0016999,GO:0017144,GO:0019318,GO:0019362,GO:0019637,GO:0019660,GO:0019664,GO:0019666,GO:0019693,GO:0019752,GO:0032787,GO:0034308,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0050896,GO:0051186,GO:0051287,GO:0055086,GO:0055114,GO:0070404,GO:0071704,GO:0072521,GO:0072524,GO:0097159,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901615 1.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 430.0
YHH3_k127_12074588_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000001959 180.0
YHH3_k127_12074588_2 Protein of unknown function (DUF2492) - - - 0.0000000000000001637 82.0
YHH3_k127_12074588_3 - - - - 0.00000002339 65.0
YHH3_k127_12077764_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K15580 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006810,GO:0006811,GO:0006820,GO:0006857,GO:0006869,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010876,GO:0015711,GO:0015718,GO:0015721,GO:0015833,GO:0015849,GO:0015850,GO:0030288,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0042277,GO:0042597,GO:0042886,GO:0042939,GO:0044464,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0061077,GO:0071702,GO:0071705,GO:1900750 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 578.0
YHH3_k127_12077764_1 Binding-protein-dependent transport system inner membrane component K15581 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 382.0
YHH3_k127_12077764_2 PHP domain K04486 - 3.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003476 272.0
YHH3_k127_12077764_3 Binding-protein-dependent transport system inner membrane component K15582 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002388 259.0
YHH3_k127_12083073_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.031e-240 751.0
YHH3_k127_12083073_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 393.0
YHH3_k127_12083073_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 350.0
YHH3_k127_12083073_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 299.0
YHH3_k127_12083073_4 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000001367 156.0
YHH3_k127_12083073_5 PFAM H transporting two-sector ATPase C subunit K02110 - - 0.000000000000000000000007735 104.0
YHH3_k127_12083073_6 ATP synthase delta (OSCP) subunit K02113 - - 0.00000001733 61.0
YHH3_k127_12108897_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1201.0
YHH3_k127_12108897_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009637 609.0
YHH3_k127_12108897_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 510.0
YHH3_k127_12108897_3 Domain of unknown function (DUF1732) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004179 253.0
YHH3_k127_12108897_4 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000003132 203.0
YHH3_k127_12108897_5 PFAM Sulfate transporter antisigma-factor antagonist STAS - - - 0.000000000000000000000000000000000000000000000009136 177.0
YHH3_k127_12108897_6 Eukaryotic integral membrane protein (DUF1751) K09650 - 3.4.21.105 0.000000000000000000000000000000000000003688 151.0
YHH3_k127_12120685_0 Beta-galactosidase - - - 0.000000000000000000000000000000000000000000000000000163 202.0
YHH3_k127_12120685_1 FecR protein - - - 0.0000000000000001576 95.0
YHH3_k127_12120685_2 - - - - 0.00000000002954 78.0
YHH3_k127_12120954_1 Peptidoglycan-binding domain 1 protein K01447,K07126,K13582 - 3.5.1.28 0.0000000000000000000000002445 114.0
YHH3_k127_12120954_2 - - - - 0.000001808 58.0
YHH3_k127_12137841_0 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007578 382.0
YHH3_k127_12137841_1 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009602 333.0
YHH3_k127_12175117_0 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009452 319.0
YHH3_k127_12175117_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 306.0
YHH3_k127_12175117_2 PFAM Integrase catalytic region K07497 - - 0.000000000000000000000000000000000000000000000000000000000001896 220.0
YHH3_k127_12175117_3 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.0000000000000000000000000000000000000000000000000001131 198.0
YHH3_k127_12175117_4 COG0457 FOG TPR repeat - - - 0.000000000000000000000009878 112.0
YHH3_k127_12175117_5 PFAM transposase IS3 IS911 family protein K07483 - - 0.00000000006788 66.0
YHH3_k127_12175117_6 Methionine synthase B12-binding module cap domain protein - - - 0.0000000007448 61.0
YHH3_k127_12181684_0 NADH dehydrogenase K00335,K18331 - 1.12.1.3,1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 421.0
YHH3_k127_12181684_1 2 iron, 2 sulfur cluster binding K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000007804 200.0
YHH3_k127_12181684_2 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000114 196.0
YHH3_k127_12204032_0 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 552.0
YHH3_k127_12204032_1 domain, Protein K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000437 551.0
YHH3_k127_12204032_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000003684 115.0
YHH3_k127_12204032_3 Membrane - - - 0.0003606 51.0
YHH3_k127_12206074_0 Periplasmic binding protein-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008679 390.0
YHH3_k127_12206074_1 Galactokinase galactose-binding signature K00849 - 2.7.1.6 0.0000000000000000000000000000000000000000000001834 173.0
YHH3_k127_12206074_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000004275 121.0
YHH3_k127_12217096_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 320.0
YHH3_k127_12217096_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000004658 233.0
YHH3_k127_12217096_2 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.0000000000000000000000000002467 116.0
YHH3_k127_12217096_3 Transposase IS200 like K07491 - - 0.0000000000000000000000007918 104.0
YHH3_k127_12276716_0 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 315.0
YHH3_k127_12276716_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005636 259.0
YHH3_k127_12276716_2 ResB-like family - - - 0.00000000000000000000000000000000000000000002558 171.0
YHH3_k127_12276716_3 Response regulator receiver - - - 0.000000000000000000000000000000003687 135.0
YHH3_k127_12276716_4 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000003258 108.0
YHH3_k127_12276716_5 - - - - 0.000000000000000001305 94.0
YHH3_k127_12302849_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007461 526.0
YHH3_k127_12302849_1 Glycine cleavage system regulatory protein - - - 0.0000000000002695 73.0
YHH3_k127_12302849_2 Ubiquitin homologues K22254 - - 0.000001382 56.0
YHH3_k127_12304989_0 transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 472.0
YHH3_k127_12304989_1 transposition K07497 - - 0.000001464 51.0
YHH3_k127_12323837_0 PFAM oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008963 246.0
YHH3_k127_12332713_0 Beta galactosidase small chain K01190 - 3.2.1.23 7.734e-229 741.0
YHH3_k127_12332713_1 PFAM Glycosyl hydrolases family 2, sugar binding domain K15923 - 3.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 417.0
YHH3_k127_12387081_0 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 298.0
YHH3_k127_12387081_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000004042 133.0
YHH3_k127_12387081_2 - - - - 0.00000000000000000000000002006 122.0
YHH3_k127_12404791_0 sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 549.0
YHH3_k127_12411033_0 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 410.0
YHH3_k127_12411033_1 ROK family K00886 - 2.7.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000003397 246.0
YHH3_k127_12411033_2 COG1473 Metal-dependent amidase aminoacylase carboxypeptidase K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000001919 237.0
YHH3_k127_12411033_3 cytidine deaminase activity - - - 0.00000000000000000000000000000000000000000000000000000000000002039 218.0
YHH3_k127_12411033_4 LysE type translocator - - - 0.00000006154 56.0
YHH3_k127_12442029_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 441.0
YHH3_k127_12442029_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 424.0
YHH3_k127_12442029_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000003697 227.0
YHH3_k127_12442029_3 Alanine racemase, N-terminal domain K06997 - - 0.00000000000000000000000000000000000000000000000000000000000001209 222.0
YHH3_k127_12442029_4 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000000000000000000000002359 201.0
YHH3_k127_12465933_0 Type VI secretion protein, EvpB/VC_A0108, tail sheath K11900 - - 2.771e-237 741.0
YHH3_k127_12465933_1 Type VI secretion system, TssF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003376 510.0
YHH3_k127_12465933_2 ImpE protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006609 254.0
YHH3_k127_12465933_3 This family consists of several bacterial proteins of K11903 - - 0.000000000000000000000000000000000000000000000000009342 184.0
YHH3_k127_12465933_4 Gene 25-like lysozyme - - - 0.0000000000000000000000000000000000000000001991 164.0
YHH3_k127_12465933_5 TIGRFAM type VI secretion protein, VC_A0107 family K11901 - - 0.0000000000000000000000000000000000000000008671 158.0
YHH3_k127_12469413_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.852e-276 877.0
YHH3_k127_12469413_1 tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.00000000000000000000000000000000000000001451 153.0
YHH3_k127_12469413_2 Glutathione S-transferase, N-terminal domain - - - 0.0000000000000000000000002977 107.0
YHH3_k127_1248374_0 Na+-transporting oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009293 500.0
YHH3_k127_1248374_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 481.0
YHH3_k127_1248374_2 CoA carboxylase activity K01965,K02160 - 6.4.1.3 0.0000000000000000001237 91.0
YHH3_k127_12494139_0 PFAM Pectinesterase K01051,K10297 GO:0005575,GO:0005576 3.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 468.0
YHH3_k127_12494139_1 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.00000000002146 64.0
YHH3_k127_12506117_0 Mur ligase K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 523.0
YHH3_k127_12506117_1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 398.0
YHH3_k127_12506117_2 PFAM FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007513 385.0
YHH3_k127_12506117_3 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 300.0
YHH3_k127_12506117_4 UreE urease accessory protein, C-terminal domain K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 295.0
YHH3_k127_12568637_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.772e-283 877.0
YHH3_k127_12568637_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 309.0
YHH3_k127_12568637_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000002952 224.0
YHH3_k127_12568637_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000008632 132.0
YHH3_k127_12596700_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.625e-262 822.0
YHH3_k127_12596700_1 Peptidase M48 K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 501.0
YHH3_k127_12596700_2 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000008518 162.0
YHH3_k127_12596700_3 - - - - 0.0000000000000000000000000000000000001509 158.0
YHH3_k127_12596700_4 Src homology 3 domains - - - 0.00000000000000000007288 95.0
YHH3_k127_12596700_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000148 83.0
YHH3_k127_12596700_6 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000006349 57.0
YHH3_k127_1261013_0 AcrB/AcrD/AcrF family - - - 0.0 1726.0
YHH3_k127_1261013_1 Protein of unknown function (DUF3347) - - - 0.0000000000000000000000000000000000000000000000000001537 190.0
YHH3_k127_12620341_0 Vault protein inter-alpha-trypsin domain - - - 1.511e-201 649.0
YHH3_k127_12620341_1 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 355.0
YHH3_k127_12620341_2 proteolysis - - - 0.0000000000002571 79.0
YHH3_k127_12634762_0 Pfam Adenylate and Guanylate cyclase catalytic domain K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 333.0
YHH3_k127_12634762_1 HMGL-like K01571 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003746 305.0
YHH3_k127_12634762_2 - K07341 - - 0.0000000000000000000000000003546 116.0
YHH3_k127_12693088_0 unsaturated fatty acid biosynthetic process - - - 1.364e-214 674.0
YHH3_k127_12693088_1 Protein of unknown function (DUF2959) - - - 0.00000000000000000000000000000000000000000000000000000000000727 213.0
YHH3_k127_12697186_0 AcrB/AcrD/AcrF family K18989 - - 4.4e-323 1013.0
YHH3_k127_12697186_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007042 265.0
YHH3_k127_12697186_2 cellulase activity - - - 0.000000006016 66.0
YHH3_k127_12713838_0 acetyl-CoA hydrolase K18288 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 542.0
YHH3_k127_12713838_1 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 521.0
YHH3_k127_12713838_2 PFAM Methionine biosynthesis MetW protein - - - 0.000000000000000000000000000000000000000000000000000000001515 207.0
YHH3_k127_12713838_3 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000007168 149.0
YHH3_k127_12754727_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.292e-246 769.0
YHH3_k127_12754727_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00895,K21071 - 2.7.1.11,2.7.1.90 3.893e-205 644.0
YHH3_k127_12754727_2 K -dependent Na Ca exchanger - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 359.0
YHH3_k127_12754727_3 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001826 261.0
YHH3_k127_12754727_4 lipolytic protein G-D-S-L family K01119,K20276 - 3.1.3.6,3.1.4.16 0.0000000000000000000002722 103.0
YHH3_k127_12779656_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1570.0
YHH3_k127_12779656_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 5.489e-218 681.0
YHH3_k127_12779656_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 368.0
YHH3_k127_12779656_3 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000506 274.0
YHH3_k127_12779656_4 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001546 270.0
YHH3_k127_12785146_0 Sulfatase K01135 - 3.1.6.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000881 371.0
YHH3_k127_1280606_0 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006608 280.0
YHH3_k127_12827615_0 Carboxyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 352.0
YHH3_k127_12827615_1 competence protein - - - 0.0000000000000000000000000000000000000000000000001327 185.0
YHH3_k127_12827615_2 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000002846 158.0
YHH3_k127_12833790_0 Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 601.0
YHH3_k127_12833790_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 516.0
YHH3_k127_12833790_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 0.00000003408 57.0
YHH3_k127_12852779_0 Belongs to the DegT DnrJ EryC1 family K12452 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 546.0
YHH3_k127_12852779_1 Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 316.0
YHH3_k127_12852779_2 Glycosyltransferase like family 2 K00721,K20534 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000027 234.0
YHH3_k127_12852779_3 NAD dependent epimerase dehydratase family protein - - - 0.0001777 46.0
YHH3_k127_1322201_0 DNA-templated transcription, initiation K03088 - - 3.388e-236 741.0
YHH3_k127_1322201_1 myo-inosose-2 dehydratase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 354.0
YHH3_k127_1441707_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 608.0
YHH3_k127_1441707_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 385.0
YHH3_k127_1441707_10 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.000000000000000000000000000003836 128.0
YHH3_k127_1441707_11 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000009978 108.0
YHH3_k127_1441707_2 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 347.0
YHH3_k127_1441707_3 ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002638 283.0
YHH3_k127_1441707_4 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000007849 268.0
YHH3_k127_1441707_5 PPIC-type PPIASE domain K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000001266 275.0
YHH3_k127_1441707_6 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.000000000000000000000000000000000000000000000000000418 203.0
YHH3_k127_1441707_7 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000003207 150.0
YHH3_k127_1441707_8 low molecular weight K01104 - 3.1.3.48 0.00000000000000000000000000000000000005721 148.0
YHH3_k127_1441707_9 Protein of unknown function (DUF721) - - - 0.000000000000000000000000000000000001553 149.0
YHH3_k127_1459602_0 Belongs to the heme-copper respiratory oxidase family K15862 - 1.9.3.1 0.0 1123.0
YHH3_k127_1459602_1 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000003014 229.0
YHH3_k127_1459602_2 N-terminal domain of cytochrome oxidase-cbb3, FixP - - - 0.00000000000000000000000000000000000000000000000004319 184.0
YHH3_k127_1459602_4 - - - - 0.00001554 50.0
YHH3_k127_1462565_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 5.074e-321 998.0
YHH3_k127_1462565_1 Organic solvent tolerance protein K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007831 337.0
YHH3_k127_1462565_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001072 276.0
YHH3_k127_1462565_3 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000001979 166.0
YHH3_k127_1462565_4 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000001371 132.0
YHH3_k127_1462565_6 Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.0000000001979 62.0
YHH3_k127_1469381_0 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000823 319.0
YHH3_k127_1469381_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002601 277.0
YHH3_k127_1469381_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000003671 239.0
YHH3_k127_1469381_3 Abortive infection protein - - - 0.000000000000000000000000000000000000000000000000003399 188.0
YHH3_k127_1469381_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000001493 190.0
YHH3_k127_1485111_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 581.0
YHH3_k127_1485111_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 368.0
YHH3_k127_1489941_0 TIGRFAM type VI secretion ATPase, ClpV1 family K11907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 556.0
YHH3_k127_1489941_1 Phage late control gene D protein (GPD) K11904 - - 0.00000000000000000000000000000000000000000000000000000002576 201.0
YHH3_k127_1492084_0 Outer membrane protein beta-barrel family - - - 0.000000000273 67.0
YHH3_k127_1507121_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004811 392.0
YHH3_k127_1507121_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 330.0
YHH3_k127_1507121_2 6-phosphogluconolactonase K07404 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000001208 259.0
YHH3_k127_1510255_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 615.0
YHH3_k127_1510255_1 Catalyzes the conversion of L-arabinose to L-ribulose K01804 - 5.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 423.0
YHH3_k127_1510255_2 PIN domain - - - 0.0000000000005036 74.0
YHH3_k127_1525902_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 472.0
YHH3_k127_1525902_1 tagaturonate epimerase K21619 - 5.1.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 391.0
YHH3_k127_1525902_2 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 314.0
YHH3_k127_1525902_3 Periplasmic binding proteins and sugar binding domain of LacI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009389 270.0
YHH3_k127_1525902_4 PIN domain - - - 0.00000000000000000000001566 105.0
YHH3_k127_1525902_5 PIN domain - - - 0.000000000003851 67.0
YHH3_k127_1525902_6 positive regulation of growth - - - 0.0000002078 56.0
YHH3_k127_1543068_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000005733 265.0
YHH3_k127_1543068_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000001386 180.0
YHH3_k127_1546523_0 Belongs to the glycosyl hydrolase 18 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 496.0
YHH3_k127_1549010_0 COG1132 ABC-type multidrug transport system, ATPase and permease components K06147 - - 0.0000000000000000000000000000000000000000003425 161.0
YHH3_k127_1549010_1 lipoprotein Blc K03098 - - 0.000000000000000000000000001202 112.0
YHH3_k127_1549010_2 DeoR C terminal sensor domain - - - 0.00000000000000000008606 99.0
YHH3_k127_1549010_3 ADP-ribosylglycohydrolase - - - 0.0002689 46.0
YHH3_k127_156202_0 Fe-S metabolism K02426 - - 0.00000000000000000000000000000000000000000000007397 173.0
YHH3_k127_156202_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.00000000000000000000000004885 109.0
YHH3_k127_156202_2 PFAM TatD-related deoxyribonuclease K03424 - - 0.00000000000000192 82.0
YHH3_k127_156202_3 Variant SH3 domain - - - 0.00000348 53.0
YHH3_k127_15953_0 COGs COG0767 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 313.0
YHH3_k127_15953_1 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007774 282.0
YHH3_k127_15953_2 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.000000000000000000000000000000000000000000000000000000000000000000008731 256.0
YHH3_k127_1601600_0 Urea ABC transporter permease K11961 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 471.0
YHH3_k127_1601600_1 Branched-chain amino acid ATP-binding cassette transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 407.0
YHH3_k127_1601600_2 urea ABC transporter, ATP-binding protein K11963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 316.0
YHH3_k127_1601600_3 Urease, gamma subunit - - - 0.0000000000000000000000000000000000000000000000002943 176.0
YHH3_k127_1601600_4 Belongs to the urease beta subunit family K01429 - 3.5.1.5 0.0000000000000000000000000000000000003087 148.0
YHH3_k127_1601600_5 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 0.0000000000000000000000000007894 114.0
YHH3_k127_1617124_0 - - - - 0.0 1683.0
YHH3_k127_1627413_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000001741 168.0
YHH3_k127_1627413_1 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K01802,K03772 - 5.2.1.8 0.00000000000000000000000000000000162 139.0
YHH3_k127_1627413_2 Sigma-70, region 4 - - - 0.0000000000000000000000154 111.0
YHH3_k127_1627413_3 Rhodanese-like domain - - - 0.00000000000000000003759 95.0
YHH3_k127_1627413_4 Methylamine utilisation protein MauE - - - 0.000000000000004429 81.0
YHH3_k127_1689774_0 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 410.0
YHH3_k127_1689774_1 Involved in DNA repair and RecF pathway recombination - - - 0.0000000000000000000001335 103.0
YHH3_k127_1689774_2 Golgi phosphoprotein 3 (GPP34) - - - 0.0000000000000000014 96.0
YHH3_k127_1689774_4 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.00002533 48.0
YHH3_k127_1699396_0 COG3119 Arylsulfatase A and related enzymes K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 548.0
YHH3_k127_1699396_1 Uncharacterized protein conserved in bacteria (DUF2264) - - - 0.0000000000000002251 83.0
YHH3_k127_1699396_2 energy transducer activity K03832 - - 0.00000003015 64.0
YHH3_k127_1725398_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.676e-218 690.0
YHH3_k127_1730489_0 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 307.0
YHH3_k127_1730489_1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 287.0
YHH3_k127_1730489_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 0.00000000000000077 77.0
YHH3_k127_1750771_0 FGGY family of carbohydrate kinases, C-terminal domain K00879 - 2.7.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007895 379.0
YHH3_k127_1750771_1 Domain of unknown function (DUF4432) - - - 0.000000000000000000000000000000000000006325 151.0
YHH3_k127_1812740_0 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 623.0
YHH3_k127_1812740_1 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 556.0
YHH3_k127_1812740_2 Transaldolase/Fructose-6-phosphate aldolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 390.0
YHH3_k127_1812740_3 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000001272 206.0
YHH3_k127_1812740_5 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000001099 148.0
YHH3_k127_1812740_6 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 0.00000000000000000000000000000001873 130.0
YHH3_k127_1812740_7 PFAM Stress responsive alpha-beta barrel - - - 0.000000000000000005993 87.0
YHH3_k127_1812740_8 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000003625 52.0
YHH3_k127_1812740_9 Peptidase M16 K07263 - - 0.0003761 47.0
YHH3_k127_1859392_0 Glycoside hydrolase family 30 K01201 - 3.2.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 320.0
YHH3_k127_1859392_1 PFAM glycoside hydrolase, family 16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005732 253.0
YHH3_k127_18876_0 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000000000002562 209.0
YHH3_k127_18876_1 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000002426 128.0
YHH3_k127_18876_2 7TM receptor with intracellular HD hydrolase K07037 - - 0.0000000000000000000000000000009036 125.0
YHH3_k127_1902084_0 AAA ATPase domain - - - 1.138e-298 934.0
YHH3_k127_1911272_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07644 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 325.0
YHH3_k127_1911272_1 Two component transcriptional regulator, winged helix family K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 314.0
YHH3_k127_1911272_2 Cytochrome C oxidase, mono-heme subunit/FixO K00405 - - 0.0000000000000000000000000000000000000000000000000000004228 207.0
YHH3_k127_1911272_3 Cytochrome C oxidase, mono-heme subunit/FixO K00405 - - 0.000000000237 66.0
YHH3_k127_1911272_4 Belongs to the pirin family K06911 - - 0.00000001919 59.0
YHH3_k127_1918318_0 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 341.0
YHH3_k127_1918318_1 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 332.0
YHH3_k127_1918318_2 Belongs to the UPF0502 family K09915 - - 0.00000000000000000000000000000000000000000002918 169.0
YHH3_k127_1918318_3 phosphoribosyl-ATP diphosphatase activity K01523,K01814,K11755 GO:0000105,GO:0000287,GO:0003674,GO:0003824,GO:0004635,GO:0004636,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043167,GO:0043169,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052803,GO:0071704,GO:0071944,GO:0075136,GO:0075139,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31,5.3.1.16 0.00000000000000000000000000000003373 128.0
YHH3_k127_1918318_4 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00005458 49.0
YHH3_k127_193294_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 492.0
YHH3_k127_193294_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 351.0
YHH3_k127_193294_2 Bile acid sodium symporter K03453 - - 0.00000000000667 66.0
YHH3_k127_193294_3 homoserine transmembrane transporter activity K06895 GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015174,GO:0015181,GO:0015318,GO:0015711,GO:0015802,GO:0015807,GO:0015809,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0034220,GO:0042221,GO:0042493,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902023,GO:1903825,GO:1903826,GO:1905039,GO:1990822 - 0.0000000924 61.0
YHH3_k127_1947131_0 Iron-containing alcohol dehydrogenase K11173 - 1.1.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 423.0
YHH3_k127_1947131_1 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.00000000000000000000000000006801 116.0
YHH3_k127_1960631_0 2-oxoglutarate dehydrogenase C-terminal K00164 - 1.2.4.2 0.0 1064.0
YHH3_k127_1960631_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.209e-247 787.0
YHH3_k127_1960631_10 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000593 259.0
YHH3_k127_1960631_11 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000001583 262.0
YHH3_k127_1960631_12 UvrB/uvrC motif K19411 - - 0.0000000000000000000000000000000000000000000000000000000000003468 215.0
YHH3_k127_1960631_13 Protein of unknown function (DUF2851) - - - 0.0000000000000000000000000000000000000000000000000000000001402 219.0
YHH3_k127_1960631_14 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 0.000000000000000000000000005344 113.0
YHH3_k127_1960631_15 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0033554,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000004094 57.0
YHH3_k127_1960631_16 RNA-binding protein containing a PIN domain K06962 - - 0.0002561 51.0
YHH3_k127_1960631_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 8.179e-237 757.0
YHH3_k127_1960631_3 DHHA2 K15986 - 3.6.1.1 3.338e-196 627.0
YHH3_k127_1960631_4 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 574.0
YHH3_k127_1960631_5 C-terminal, D2-small domain, of ClpB protein K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 562.0
YHH3_k127_1960631_6 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 421.0
YHH3_k127_1960631_7 Protein-arginine kinase K19405 - 2.7.14.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003986 390.0
YHH3_k127_1960631_8 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 368.0
YHH3_k127_1960631_9 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 308.0
YHH3_k127_1986138_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1143.0
YHH3_k127_1986138_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 302.0
YHH3_k127_2015312_0 Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate K06447 GO:0003674,GO:0003824,GO:0004029,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.2.1.71 0.00000000000000000000000000000000000000000000000000000000000000000000000003384 257.0
YHH3_k127_2015312_1 COG3138 Arginine ornithine N-succinyltransferase beta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000001079 235.0
YHH3_k127_2029230_0 Domain of unknown function (DUF4143) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009313 511.0
YHH3_k127_2029230_1 CotH kinase protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 440.0
YHH3_k127_2029230_2 Cation transport protein - - - 0.0000000000000000000000000001736 124.0
YHH3_k127_2029230_3 - - - - 0.0003365 45.0
YHH3_k127_2051766_0 Peptidase, M20 K01295 - 3.4.17.11 0.0000000000000000000000000000000000000000000000000000000000001319 223.0
YHH3_k127_2051766_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000002883 139.0
YHH3_k127_2094238_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000004966 232.0
YHH3_k127_2094238_1 Glycosyl hydrolases family 16 - - - 0.000000000000000000001133 101.0
YHH3_k127_2094238_2 iron ion homeostasis K04758 GO:0000041,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0015684,GO:0030001,GO:0033554,GO:0034220,GO:0034755,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070627,GO:0070838,GO:0072511,GO:0097286,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098707,GO:0098711,GO:0098739,GO:0099587,GO:1903874 - 0.0000000000000001204 82.0
YHH3_k127_2131810_0 MotA/TolQ/ExbB proton channel family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005425 368.0
YHH3_k127_2131810_1 biopolymer transport protein K03559 - - 0.000000000000000000000000000000000000000000000005951 175.0
YHH3_k127_2131810_2 Protein of unknown function (DUF3450) - - - 0.000000000000000000000000000000000000000002097 166.0
YHH3_k127_2131810_3 MotA/TolQ/ExbB proton channel family - - - 0.00000000000000000000000000000000000174 145.0
YHH3_k127_2131810_4 energy transducer activity K03832 - - 0.000000000000005922 79.0
YHH3_k127_21547_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 329.0
YHH3_k127_21547_1 PFAM Fructosamine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 304.0
YHH3_k127_21547_2 Glycosyl transferases group 1 K12989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 298.0
YHH3_k127_21547_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000001318 201.0
YHH3_k127_21547_4 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000002808 188.0
YHH3_k127_21547_5 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000004353 179.0
YHH3_k127_21547_6 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000002423 177.0
YHH3_k127_21547_7 COG0500 SAM-dependent methyltransferases - - - 0.000000000000000000000000000000002163 138.0
YHH3_k127_2176826_0 glycosyl hydrolase of K09955 - - 4.214e-212 677.0
YHH3_k127_2176826_1 transketolase activity K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 441.0
YHH3_k127_2176826_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 438.0
YHH3_k127_2176826_3 transketolase activity K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000005487 198.0
YHH3_k127_2253083_0 PFAM peptidase M3A and M3B thimet oligopeptidase F K08602 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 453.0
YHH3_k127_2253083_1 Flavodoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 413.0
YHH3_k127_2253083_2 PD-(D/E)XK nuclease superfamily K03582,K16898 - 3.1.11.5,3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 423.0
YHH3_k127_2253083_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 334.0
YHH3_k127_2253083_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000008365 228.0
YHH3_k127_2253083_5 Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) K08680 - 4.2.99.20 0.000000000000000000000000000000000007155 147.0
YHH3_k127_2263278_0 Aldo/keto reductase family K07079 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009407 378.0
YHH3_k127_2263278_1 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008995 330.0
YHH3_k127_2270572_0 Recombinase - - - 6.364e-297 927.0
YHH3_k127_2270572_1 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.000000000006733 74.0
YHH3_k127_2272042_0 L-fucose isomerase, C-terminal domain K01804 - 5.3.1.4 3.936e-226 707.0
YHH3_k127_2272042_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003033 280.0
YHH3_k127_2272042_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004879 271.0
YHH3_k127_2272042_4 Involved in the anomeric conversion of L-rhamnose K03534 - 5.1.3.32 0.0000000000000000000000000000000963 128.0
YHH3_k127_2272042_5 Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system) K02856 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0015291,GO:0015293,GO:0015749,GO:0015762,GO:0016020,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 - 0.00002735 50.0
YHH3_k127_2277772_0 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0 1105.0
YHH3_k127_2277772_1 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004895 443.0
YHH3_k127_2277772_2 Methylmalonyl-CoA mutase K01847,K03763,K14447 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016999,GO:0017144,GO:0019541,GO:0019678,GO:0019752,GO:0030312,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046459,GO:0071704,GO:0071944 2.7.7.7,5.4.99.2,5.4.99.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008812 367.0
YHH3_k127_2295063_0 PFAM aminotransferase class I and II K14155 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 409.0
YHH3_k127_2295063_1 Predicted permease YjgP/YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008121 289.0
YHH3_k127_2295063_2 HAD-hyrolase-like - - - 0.0000000000005727 72.0
YHH3_k127_2308197_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 602.0
YHH3_k127_2308197_1 Beta-lactamase K17836 - 3.5.2.6 0.00009202 45.0
YHH3_k127_2310097_0 HMGL-like - - - 1.399e-230 725.0
YHH3_k127_2310097_1 Nucleotidyl transferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 443.0
YHH3_k127_2310097_10 thiosulfate sulfurtransferase activity - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0009719,GO:0009725,GO:0009735,GO:0010033,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0050896 - 0.00000000000000000000009514 101.0
YHH3_k127_2310097_11 RDD family - - - 0.0000002402 60.0
YHH3_k127_2310097_12 mechanosensitive ion channel K03442 - - 0.00004346 49.0
YHH3_k127_2310097_2 Phospholipase D. Active site motifs. K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 397.0
YHH3_k127_2310097_3 PFAM ABC 3 transport family K09816,K09819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000137 288.0
YHH3_k127_2310097_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007924 273.0
YHH3_k127_2310097_5 Flavoprotein K01598 - 4.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000002242 225.0
YHH3_k127_2310097_6 ABC transporter K09817 - - 0.00000000000000000000000000000000000000000000000000000000000001077 224.0
YHH3_k127_2310097_7 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000000000000000000478 186.0
YHH3_k127_2310097_8 PFAM periplasmic solute binding protein K09815 - - 0.0000000000000000000000000000000000000000000000008211 186.0
YHH3_k127_2310097_9 - - - - 0.00000000000000000000000003889 118.0
YHH3_k127_2320853_0 FtsK/SpoIIIE family K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 355.0
YHH3_k127_2320853_1 Guanylate kinase homologues. K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000365 182.0
YHH3_k127_2320853_2 Response regulator receiver - - - 0.0000000000001725 72.0
YHH3_k127_2326676_0 4Fe-4S dicluster domain K00184 - - 0.0 1189.0
YHH3_k127_2326676_1 Polysulphide reductase, NrfD K00185 - - 7.185e-256 796.0
YHH3_k127_2326676_10 DoxX K15977 - - 0.0000000000001436 76.0
YHH3_k127_2326676_11 - - - - 0.000000000008341 68.0
YHH3_k127_2326676_12 cytochrome c oxidase K00405 - - 0.000004044 51.0
YHH3_k127_2326676_14 - - - - 0.0002922 49.0
YHH3_k127_2326676_2 Cytochrome C and Quinol oxidase polypeptide I K00404 - 1.9.3.1 6.079e-218 685.0
YHH3_k127_2326676_3 E1-E2 ATPase K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007431 444.0
YHH3_k127_2326676_4 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 429.0
YHH3_k127_2326676_5 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 328.0
YHH3_k127_2326676_6 Belongs to the OMP decarboxylase family. Type 2 subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859 296.0
YHH3_k127_2326676_7 Protein of unknown function (DUF3341) - - - 0.0000000000000000000000000000000000000000000000000000000000000002812 224.0
YHH3_k127_2326676_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000001965 182.0
YHH3_k127_2326676_9 PFAM FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000001179 167.0
YHH3_k127_2349091_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 460.0
YHH3_k127_2349091_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008929 358.0
YHH3_k127_2349091_2 inositol monophosphate 1-phosphatase activity K01082,K01092 - 3.1.3.25,3.1.3.7 0.000000000000000000000000000000000000000132 153.0
YHH3_k127_2349743_0 A predicted alpha-helical domain with a conserved ER motif. - - - 2.86e-222 717.0
YHH3_k127_2349743_1 Putative amidoligase enzyme (DUF2126) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 372.0
YHH3_k127_2376052_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 557.0
YHH3_k127_2376052_1 outer membrane efflux protein - - - 0.00000000000009227 81.0
YHH3_k127_2388087_0 PFAM glycoside hydrolase family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 577.0
YHH3_k127_2388087_1 carboxylic ester hydrolase activity K01563,K22318,K22319 - 3.8.1.5,6.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 299.0
YHH3_k127_2388087_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000006188 223.0
YHH3_k127_2388087_3 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000004888 153.0
YHH3_k127_2388087_4 Outer Membrane Lipoprotein K03098 - - 0.000000000000000000000000000000002149 135.0
YHH3_k127_2401148_0 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 1.024e-203 642.0
YHH3_k127_2401148_1 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 516.0
YHH3_k127_2401148_2 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005786 488.0
YHH3_k127_2401148_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008297 477.0
YHH3_k127_2401148_4 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001018 264.0
YHH3_k127_2401148_5 Oligopeptide/dipeptide transporter, C-terminal region K02031,K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000001617 241.0
YHH3_k127_2401148_6 Phosphopantetheine attachment site - - - 0.0000000000000000000000000000000000004496 141.0
YHH3_k127_2430417_0 DNA-templated transcription, initiation K03088 - - 2.553e-201 640.0
YHH3_k127_2431286_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1132.0
YHH3_k127_2431286_1 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000004101 186.0
YHH3_k127_2431286_2 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000007696 155.0
YHH3_k127_2443013_0 Domain of unknown function (DUF4214) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 331.0
YHH3_k127_2443013_1 phosphoenolpyruvate carboxykinase (diphosphate) activity K20370 - 4.1.1.38 0.0000000000000000000000000000000000000000000000007828 180.0
YHH3_k127_2449287_0 purine nucleotide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007574 342.0
YHH3_k127_2449287_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006854 306.0
YHH3_k127_2449287_2 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000001804 116.0
YHH3_k127_2451234_0 transposition K07497 - - 0.0000000000000000000000000000000000000000000000000000000006078 213.0
YHH3_k127_2451234_1 Aldo/keto reductase family K07079 - - 0.0000000000000000000000000000000000000000000002798 174.0
YHH3_k127_2477789_0 Domain of unknown function (DUF4976) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005491 549.0
YHH3_k127_2523696_0 Protein of unknown function (DUF1566) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008062 377.0
YHH3_k127_2523696_1 transposase IS116 IS110 IS902 family protein K07486 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 291.0
YHH3_k127_253047_0 phosphoenolpyruvate carboxykinase (diphosphate) activity K20370 - 4.1.1.38 2.797e-271 848.0
YHH3_k127_254787_0 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 506.0
YHH3_k127_254787_1 COG2356 Endonuclease I - - - 0.0000000000000000000000004376 109.0
YHH3_k127_254787_2 Beta propeller domain - - - 0.00000008582 64.0
YHH3_k127_2556891_0 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009656 501.0
YHH3_k127_2556891_1 - - - - 0.0000000000000000000000000000000000000000001275 168.0
YHH3_k127_2556891_3 PIN domain - - - 0.000000000000000001235 91.0
YHH3_k127_2556891_4 YceI-like domain - - - 0.0000000000000105 82.0
YHH3_k127_2556891_5 toxin-antitoxin pair type II binding K19156 GO:0001558,GO:0003674,GO:0003700,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0019899,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0040008,GO:0042802,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097351,GO:0140110,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000272 54.0
YHH3_k127_2623267_0 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008767 362.0
YHH3_k127_2623267_1 PFAM permease YjgP YjgQ family protein K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 321.0
YHH3_k127_2623267_2 - - - - 0.0000000000000000000000000000000000000000000000001863 188.0
YHH3_k127_2623267_3 SNF2 family N-terminal domain - - - 0.0000002889 53.0
YHH3_k127_2630792_0 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 344.0
YHH3_k127_2630792_1 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000003761 201.0
YHH3_k127_2639855_0 Tat pathway signal sequence domain protein K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005155 404.0
YHH3_k127_2673728_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009829 311.0
YHH3_k127_2673728_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 321.0
YHH3_k127_2740334_0 Transketolase, thiamine diphosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 435.0
YHH3_k127_2740334_1 NUDIX hydrolase K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000001903 200.0
YHH3_k127_2745953_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 586.0
YHH3_k127_2745953_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000008016 246.0
YHH3_k127_2747682_0 Protein conserved in bacteria - - - 4.089e-260 813.0
YHH3_k127_2747682_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 389.0
YHH3_k127_2747682_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 362.0
YHH3_k127_2747682_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000001299 65.0
YHH3_k127_2747682_4 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000008304 54.0
YHH3_k127_2756516_0 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 585.0
YHH3_k127_2756516_1 TRAP dicarboxylate transporter, DctP subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 452.0
YHH3_k127_2756516_2 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000007231 168.0
YHH3_k127_2756516_3 - - - - 0.0000004302 60.0
YHH3_k127_2756516_4 Beta galactosidase small chain K01190 - 3.2.1.23 0.0005772 48.0
YHH3_k127_2758234_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000105 275.0
YHH3_k127_2758234_1 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008364 256.0
YHH3_k127_2758234_2 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000001525 204.0
YHH3_k127_2758234_3 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000002327 128.0
YHH3_k127_2758234_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.00000000000000000000001664 103.0
YHH3_k127_2770788_0 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 345.0
YHH3_k127_2811305_0 COG3119 Arylsulfatase A and related enzymes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 436.0
YHH3_k127_2811305_1 COG COG3119 Arylsulfatase A and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 298.0
YHH3_k127_2829837_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 477.0
YHH3_k127_2829837_1 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 384.0
YHH3_k127_2829837_2 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.00000000000000000000000000000000000000000000000000006489 192.0
YHH3_k127_2829837_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000009027 150.0
YHH3_k127_2829837_4 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000192 135.0
YHH3_k127_2840364_0 Binding-protein-dependent transport system inner membrane component K02037,K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 521.0
YHH3_k127_2840364_1 phosphate transport system permease protein K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 342.0
YHH3_k127_2843663_0 Glycogen debranching enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 512.0
YHH3_k127_2843663_1 Belongs to the glycosyl hydrolase 2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003723 266.0
YHH3_k127_2843663_2 Belongs to the PdxA family K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00000000000000000000000000000000000000000000000000000000000000005296 227.0
YHH3_k127_2850782_0 - - - - 0.0000000000000000000000000000000002908 144.0
YHH3_k127_2850782_1 response regulator - - - 0.000007552 55.0
YHH3_k127_2851250_0 UPF0365 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 437.0
YHH3_k127_2851250_1 - K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 398.0
YHH3_k127_2851250_2 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 387.0
YHH3_k127_2851250_3 Glycosyl hydrolase family 88 - - - 0.00000000000000000000000000000000000000000000000000000000006145 224.0
YHH3_k127_2851250_4 serine protease K07403 - - 0.000003133 55.0
YHH3_k127_2854599_0 - - - - 0.000000000000000000000000000000000000000000000000000000000006802 225.0
YHH3_k127_2854599_1 Protein of unknown function (DUF1638) - - - 0.00000000000000000000000000000000000000000000000000001309 198.0
YHH3_k127_2854599_2 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000004414 115.0
YHH3_k127_2855389_0 Receptor - - - 0.00000000000000000000000000003229 134.0
YHH3_k127_2856260_0 tail specific protease K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 506.0
YHH3_k127_2856260_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 485.0
YHH3_k127_2856260_2 HELICc2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 464.0
YHH3_k127_2856260_3 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 418.0
YHH3_k127_2856260_4 COG2818 3-methyladenine DNA glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002813 271.0
YHH3_k127_2856260_5 Nickel-containing superoxide dismutase K00518 - 1.15.1.1 0.000000000000000000000000000000001425 140.0
YHH3_k127_2865669_0 ABC transporter K15738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 572.0
YHH3_k127_2865669_1 PFAM LemA family protein K03744 - - 0.0000000000000000000000000000000000000000000000000006602 187.0
YHH3_k127_2865669_2 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000004053 77.0
YHH3_k127_2865669_3 PFAM PIN domain - - - 0.0000000001098 68.0
YHH3_k127_2868017_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03471 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 369.0
YHH3_k127_2868017_1 iron-sulfur cluster K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008861 241.0
YHH3_k127_2868017_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000006459 198.0
YHH3_k127_2868017_3 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00004835 51.0
YHH3_k127_286820_0 Sodium:solute symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 413.0
YHH3_k127_286820_1 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001587 274.0
YHH3_k127_286820_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.000000000000000000000000000000000415 135.0
YHH3_k127_286820_3 - - - - 0.000000009505 67.0
YHH3_k127_2956356_0 Beta-lactamase class C and other penicillin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 512.0
YHH3_k127_2956356_1 Methane oxygenase PmoA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001261 252.0
YHH3_k127_2956356_2 - - - - 0.00000000000443 79.0
YHH3_k127_2956356_3 - - - - 0.00000002691 66.0
YHH3_k127_2956356_4 - - - - 0.00002179 57.0
YHH3_k127_2956356_5 Bacterial regulatory proteins, lacI family K02529 - - 0.0006171 45.0
YHH3_k127_2975170_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 425.0
YHH3_k127_2975170_1 ATPases associated with a variety of cellular activities K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006456 280.0
YHH3_k127_2975170_2 Cytochrome C and Quinol oxidase polypeptide I K00404 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000197 241.0
YHH3_k127_2975170_3 Polyprenyl synthetase K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000003414 207.0
YHH3_k127_2975170_5 YceI-like domain - - - 0.000741 49.0
YHH3_k127_2982468_0 MazG-like family - - - 0.000000000000000000000000000000000000000008776 156.0
YHH3_k127_2982468_1 - - - - 0.0000000000001306 84.0
YHH3_k127_3006616_0 Belongs to the pseudouridine synthase RluA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 305.0
YHH3_k127_300917_0 AcrB/AcrD/AcrF family - - - 0.0 1146.0
YHH3_k127_300917_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 333.0
YHH3_k127_300917_2 Citrate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009534 264.0
YHH3_k127_300917_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K21137 - - 0.0000000000000000000000000001893 121.0
YHH3_k127_300917_4 phosphohydrolase - - - 0.0000000000000000000000009824 113.0
YHH3_k127_3009497_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 460.0
YHH3_k127_3048228_0 beta-galactosidase K01190 - 3.2.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 319.0
YHH3_k127_3048228_1 pectinesterase activity K01224 - 3.2.1.89 0.0006157 52.0
YHH3_k127_3089299_0 Catalyzes the sodium-dependent transport of glutamate K03312 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 541.0
YHH3_k127_3089299_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0006879 45.0
YHH3_k127_3132544_0 O-acyltransferase activity - - - 0.00000000000000000000000000000000000000000000000005625 186.0
YHH3_k127_3132544_1 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000005734 181.0
YHH3_k127_3132544_2 - - - - 0.0000000000000000000000000000000000000000000008533 174.0
YHH3_k127_3141658_0 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 439.0
YHH3_k127_3141658_1 symporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 415.0
YHH3_k127_3141658_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006539 358.0
YHH3_k127_3141658_3 Mandelate racemase muconate lactonizing enzyme, N-terminal domain K01683,K01684 - 4.2.1.5,4.2.1.6 0.00000000000000000000000000000000000000000000009133 175.0
YHH3_k127_3141658_4 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 0.0000000000007559 69.0
YHH3_k127_3182012_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 509.0
YHH3_k127_3182012_1 Dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001014 260.0
YHH3_k127_3182012_2 PFAM membrane protein of K08972 - - 0.000000000000005664 80.0
YHH3_k127_3197473_0 Zgc 162297 K06971 - - 0.00000000000000000000000000000000000000000000000000000000004231 215.0
YHH3_k127_3197473_1 Histidine kinase K07716,K20974 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000001939 200.0
YHH3_k127_3212758_0 4 iron, 4 sulfur cluster binding K03737 - 1.2.7.1 3.128e-300 928.0
YHH3_k127_3212758_1 RnfC Barrel sandwich hybrid domain - - - 7.967e-234 730.0
YHH3_k127_3264977_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009179 378.0
YHH3_k127_3264977_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000004394 239.0
YHH3_k127_3273908_0 PFAM sulfatase K01130 - 3.1.6.1 1.423e-321 996.0
YHH3_k127_3295318_0 Predicted Permease Membrane Region K07085 - - 1.048e-195 617.0
YHH3_k127_3295318_1 Cardiolipin synthase - - - 0.00000000000000000000000000000000000001854 152.0
YHH3_k127_3303891_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005212 309.0
YHH3_k127_3312270_0 Aminotransferase K00813 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000934 458.0
YHH3_k127_3312270_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 305.0
YHH3_k127_3312270_2 Protein of unknown function, DUF481 - - - 0.00000005498 61.0
YHH3_k127_3338465_0 Acetyltransferase (GNAT) domain K03817 - - 0.0000000000000000000000000000000000000000000000001212 183.0
YHH3_k127_3338465_1 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000001613 160.0
YHH3_k127_3338465_2 Disulphide bond corrector protein DsbC K04084 - 1.8.1.8 0.000000000000000000000000000000000005378 142.0
YHH3_k127_3338465_3 Protein of unknown function (DUF3016) - - - 0.0000000000000000002229 96.0
YHH3_k127_3339578_0 Iron-storage protein K02217 - 1.16.3.2 0.000000000000000000000000000000000000000000000004914 179.0
YHH3_k127_3339578_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K05337 - - 0.00000000000000000000001592 101.0
YHH3_k127_3339578_2 - - - - 0.00000000000000004855 86.0
YHH3_k127_3347914_0 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004795 244.0
YHH3_k127_3347914_1 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000001114 224.0
YHH3_k127_3347914_2 cheY-homologous receiver domain - - - 0.000005458 52.0
YHH3_k127_3365222_0 Bacterial Ig-like domain K06894 - - 0.00007514 57.0
YHH3_k127_3406192_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 8.705e-197 623.0
YHH3_k127_3406192_3 Domain of unknown function (DUF4139) - - - 0.000004605 53.0
YHH3_k127_3430557_0 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000000000000121 201.0
YHH3_k127_3430557_1 cellulase activity K14274,K20276 - - 0.0000000000000000000000000000000000001446 158.0
YHH3_k127_3431354_0 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0 1024.0
YHH3_k127_3438147_0 Transposase DDE domain - - - 7.449e-226 713.0
YHH3_k127_3438147_1 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 0.0000000000007607 68.0
YHH3_k127_3438147_2 Glycogen debranching enzyme - - - 0.000000001503 59.0
YHH3_k127_3438147_3 Histidine kinase K02668 - 2.7.13.3 0.000002578 49.0
YHH3_k127_348947_0 RbsD / FucU transport protein family K02431 - 5.1.3.29 0.000000000000000000000000000000000000000000000000000000000000000000438 230.0
YHH3_k127_348947_1 Protein of unknown function (DUF3592) - - - 0.00000000000000000000000000000000000000000000000000000000000000001767 231.0
YHH3_k127_348947_2 S1 domain K00243 - - 0.0000000000000000000000000000000000000000000000000000000003235 207.0
YHH3_k127_348947_3 - - - - 0.0000000000000000000000000000000000000000000116 169.0
YHH3_k127_348947_4 - - - - 0.0000000000000000000000000000000000000000244 158.0
YHH3_k127_3602494_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 326.0
YHH3_k127_3606670_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5,6.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 464.0
YHH3_k127_3606670_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006763 400.0
YHH3_k127_3606670_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009273 328.0
YHH3_k127_3606670_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000004118 250.0
YHH3_k127_3606670_4 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000002496 145.0
YHH3_k127_3606670_5 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000009614 98.0
YHH3_k127_362223_0 Receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008363 481.0
YHH3_k127_362223_1 4-phosphoerythronate dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 304.0
YHH3_k127_362223_2 purine nucleotide biosynthetic process K02529,K03435,K05499 - - 0.00000000000000000000000000000000000000000000000000000000002492 221.0
YHH3_k127_362223_3 Xylose isomerase-like TIM barrel - - - 0.000000000000976 71.0
YHH3_k127_362223_4 Carbohydrate family 9 binding domain-like - - - 0.0000562 57.0
YHH3_k127_3668959_0 ABC transporter K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007601 544.0
YHH3_k127_3668959_1 Chalcone isomerase-like - - - 0.000000000000000000000000000000000001213 147.0
YHH3_k127_3668959_2 Cytidylate kinase-like family - - - 0.00000000000000000000000000000000002389 143.0
YHH3_k127_3697781_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 312.0
YHH3_k127_3697781_1 PAAR repeat-containing protein - - - 0.000000000000000000000000000000000000000000005605 167.0
YHH3_k127_3698715_0 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005918 441.0
YHH3_k127_3698715_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000000000000000000000000000000000000000000001292 227.0
YHH3_k127_3698715_2 AMP-dependent synthetase K05939 - 2.3.1.40,6.2.1.20 0.0000000000000000000000000000000000000000000000000000001651 198.0
YHH3_k127_3698715_3 Lipoate-protein ligase K03800 - 6.3.1.20 0.00000000000000000002953 96.0
YHH3_k127_3704390_0 Helix-hairpin-helix domain K02347 - - 3.284e-209 668.0
YHH3_k127_3704390_1 GTP cyclohydrolase K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 424.0
YHH3_k127_3704390_2 Trehalose utilisation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 350.0
YHH3_k127_3704390_3 SelR domain - - - 0.000000000000000000000000000000000000000000000000000000000000006252 221.0
YHH3_k127_3704390_4 SNARE associated Golgi protein - - - 0.000000000000000000000000000009164 121.0
YHH3_k127_3704390_5 Metallo-beta-lactamase superfamily - - - 0.0000001012 56.0
YHH3_k127_3708071_0 Pyruvate carboxyltransferase K01571,K01960 - 4.1.1.3,6.4.1.1 5.427e-226 710.0
YHH3_k127_3708071_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000004303 135.0
YHH3_k127_3708071_2 Pfam Adenylate and Guanylate cyclase catalytic domain K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000007448 61.0
YHH3_k127_3711620_0 - - - - 0.0000000000000000000000000004431 133.0
YHH3_k127_3711620_1 ImcF-related N-terminal domain - - - 0.00000000000000000000001756 116.0
YHH3_k127_3716420_0 PFAM alpha-L-rhamnosidase K05989 - 3.2.1.40 1.186e-257 824.0
YHH3_k127_3716420_1 Belongs to the RuBisCO large chain family K01601 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 546.0
YHH3_k127_3716420_10 - - - - 0.00000001669 64.0
YHH3_k127_3716420_2 Belongs to the purine-cytosine permease (2.A.39) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006405 509.0
YHH3_k127_3716420_3 Bile acid sodium symporter K03453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 502.0
YHH3_k127_3716420_4 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 453.0
YHH3_k127_3716420_5 Belongs to the glycosyl hydrolase 28 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 417.0
YHH3_k127_3716420_6 Putative nucleotide-binding of sugar-metabolising enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 409.0
YHH3_k127_3716420_7 Asp Glu hydantoin racemase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007554 250.0
YHH3_k127_3716420_8 Transposase K07491 - - 0.0000000000000000000000000000000000006533 145.0
YHH3_k127_3716420_9 Beta-L-arabinofuranosidase, GH127 K09955 - - 0.0000000000000000000000000000001431 130.0
YHH3_k127_3717286_0 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 341.0
YHH3_k127_3801059_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007097 519.0
YHH3_k127_3801059_1 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 488.0
YHH3_k127_3801059_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 308.0
YHH3_k127_3801059_3 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000001695 122.0
YHH3_k127_3810689_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007539 470.0
YHH3_k127_3810689_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000009448 205.0
YHH3_k127_381357_0 cellulose binding - - - 0.0000008615 63.0
YHH3_k127_3820031_0 aldo keto reductase - - - 1.958e-200 642.0
YHH3_k127_3820031_1 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 379.0
YHH3_k127_3829509_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 4.969e-214 684.0
YHH3_k127_3829509_1 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005446 453.0
YHH3_k127_3829509_10 Pilus assembly protein - - - 0.0000000001991 72.0
YHH3_k127_3829509_11 - - - - 0.000001277 56.0
YHH3_k127_3829509_12 Low molecular weight phosphatase family - - - 0.00004611 49.0
YHH3_k127_3829509_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K03429 - 2.4.1.315 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009259 381.0
YHH3_k127_3829509_3 FabA-like domain K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 297.0
YHH3_k127_3829509_4 Type II secretion system (T2SS), protein K - - - 0.00000000000000000000000000000000000006208 156.0
YHH3_k127_3829509_5 Type II secretion system (T2SS), protein G K02456 - - 0.0000000000000000000000000000000000009432 144.0
YHH3_k127_3829509_6 Phosphoadenosine phosphosulfate reductase family - - - 0.000000000000000000000004257 101.0
YHH3_k127_3829509_7 Prokaryotic N-terminal methylation motif K02458 - - 0.00000000000000000000004311 108.0
YHH3_k127_3829509_8 General secretion pathway protein - - - 0.00000000000000000000006685 107.0
YHH3_k127_3829509_9 protein transport across the cell outer membrane K02457,K02672,K08084,K08085 - - 0.0000000000008185 77.0
YHH3_k127_3862886_0 Ribonuclease E/G family K08301 - - 1.524e-216 687.0
YHH3_k127_3862886_1 TonB-dependent receptor - - - 3.961e-198 627.0
YHH3_k127_3862886_2 Belongs to the SEDS family K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 422.0
YHH3_k127_3862886_3 Alkaline phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 415.0
YHH3_k127_3862886_4 uracil-dna glycosylase K10800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002452 274.0
YHH3_k127_3862886_5 methyltransferase - - - 0.0000000000000000000000000000000000001637 152.0
YHH3_k127_3862886_6 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.00000000000000001207 86.0
YHH3_k127_387757_0 General secretory system II protein E domain protein K02652 - - 2.226e-240 756.0
YHH3_k127_387757_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 372.0
YHH3_k127_387757_2 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000801 266.0
YHH3_k127_387757_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928,K15792 - 6.3.2.10,6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000001917 276.0
YHH3_k127_387757_4 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000001426 169.0
YHH3_k127_387757_5 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000001085 160.0
YHH3_k127_387757_6 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000005102 149.0
YHH3_k127_387757_7 COG2143 Thioredoxin-related protein K04084 - 1.8.1.8 0.000000000000000000000000000002321 125.0
YHH3_k127_387757_9 Uncharacterized ACR, COG1678 K07735 - - 0.00000000000004698 74.0
YHH3_k127_3919462_0 Belongs to the glycosyl hydrolase 13 family K01200 - 3.2.1.41 7.521e-220 707.0
YHH3_k127_3919462_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 375.0
YHH3_k127_3919462_2 Domain present in PSD-95, Dlg, and ZO-1/2. K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002759 285.0
YHH3_k127_3919462_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000000000000000000000000000000000000001189 154.0
YHH3_k127_3919462_4 Transcription termination factor nusG - - - 0.00000000000000000000000000000002243 133.0
YHH3_k127_3919462_5 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000001568 115.0
YHH3_k127_3919462_6 Histidine kinase - - - 0.0000000000000000007484 100.0
YHH3_k127_392087_0 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006178 322.0
YHH3_k127_392087_1 Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000006346 219.0
YHH3_k127_392087_2 FlgJ-related protein K03796 - - 0.000000000000000000000000000000000000000000000000000006179 199.0
YHH3_k127_392087_3 PFAM chorismate binding enzyme K02552 - 5.4.4.2 0.00000000000000009947 81.0
YHH3_k127_3933176_0 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000001977 237.0
YHH3_k127_3933176_1 - - - - 0.000218 54.0
YHH3_k127_39621_0 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003556 276.0
YHH3_k127_39621_1 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000006096 271.0
YHH3_k127_39621_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000001744 264.0
YHH3_k127_39621_3 Protein of unknown function (DUF3347) - - - 0.000000000000000000000000005082 113.0
YHH3_k127_4010373_0 Phosphoenolpyruvate carboxykinase K01610 - 4.1.1.49 1.072e-199 632.0
YHH3_k127_4010373_1 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 302.0
YHH3_k127_402901_0 COG3209 Rhs family protein - - - 5.695e-270 884.0
YHH3_k127_402901_1 Domain of unknown function (DUF5069) - - - 0.00000000000000000000000000000000000000004755 156.0
YHH3_k127_4032259_0 ABC transporter K06147 - - 5.343e-237 745.0
YHH3_k127_4032259_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 620.0
YHH3_k127_4032259_2 SMART Phospholipid glycerol acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 538.0
YHH3_k127_4032259_3 Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) K01484 - 3.5.3.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 482.0
YHH3_k127_4032259_4 Transcriptional regulator, GntR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 398.0
YHH3_k127_4032259_5 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 346.0
YHH3_k127_4032259_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000235 267.0
YHH3_k127_4032259_7 Outer membrane protein protective antigen OMA87 - - - 0.00000000000000000000000000000000000000000000000000005676 205.0
YHH3_k127_4032259_8 Domain of unknown function (DUF5069) - - - 0.00000000000000000000000000000000000000000000000000251 186.0
YHH3_k127_4108197_0 Belongs to the glycosyl hydrolase family 6 K01179,K03932 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000481 245.0
YHH3_k127_4108197_1 Xylose operon regulatory protein K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000005268 248.0
YHH3_k127_4108197_2 Transglutaminase/protease-like homologues - - - 0.00000001937 55.0
YHH3_k127_4141798_0 ATPase, AAA superfamily K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006307 503.0
YHH3_k127_4141798_1 Domain of unknown function (DUF4143) K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 477.0
YHH3_k127_4141798_2 AAA domain K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 409.0
YHH3_k127_4141798_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 319.0
YHH3_k127_4183469_0 PFAM FAD linked oxidase domain protein K06911 - - 0.0 1316.0
YHH3_k127_4183469_1 B12 binding domain K00548 - 2.1.1.13 4.085e-300 938.0
YHH3_k127_4183469_2 Conserved TM helix K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001564 279.0
YHH3_k127_4214911_0 ABC-type sulfate transport system, periplasmic component K02048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001422 252.0
YHH3_k127_4214911_2 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000005045 77.0
YHH3_k127_4214911_3 esterase K12686 - - 0.00000000004876 73.0
YHH3_k127_4235607_0 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 536.0
YHH3_k127_4256158_0 Metal binding domain of Ada K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 327.0
YHH3_k127_4256158_1 Glycosyl hydrolases family 16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004791 317.0
YHH3_k127_4269819_0 Belongs to the ClpX chaperone family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933 578.0
YHH3_k127_4269819_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 293.0
YHH3_k127_433135_0 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 368.0
YHH3_k127_433135_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006124 342.0
YHH3_k127_433135_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 341.0
YHH3_k127_433135_3 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005353 283.0
YHH3_k127_433135_4 D-ala D-ala ligase N-terminus K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000171 235.0
YHH3_k127_433135_5 Lysin motif - - - 0.00000000000000000000000000005149 130.0
YHH3_k127_433135_6 Cell division protein FtsQ K03589 - - 0.000000000000000000000004758 114.0
YHH3_k127_433135_7 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000004184 108.0
YHH3_k127_4334135_0 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 435.0
YHH3_k127_4334135_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000831 220.0
YHH3_k127_4344296_0 Serine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 321.0
YHH3_k127_4344296_1 pathogenesis - - - 0.0000000000005111 80.0
YHH3_k127_4355025_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 2195.0
YHH3_k127_4355025_1 DNA topoisomerase type IA central domain protein K03169 - 5.99.1.2 4.555e-279 881.0
YHH3_k127_4355025_10 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000000000006318 90.0
YHH3_k127_4355025_2 Flavin containing amine oxidoreductase - - - 2.177e-227 715.0
YHH3_k127_4355025_3 phosphoenolpyruvate carboxykinase (diphosphate) activity K20370 - 4.1.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 528.0
YHH3_k127_4355025_4 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 491.0
YHH3_k127_4355025_5 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III domain protein K22317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 392.0
YHH3_k127_4355025_6 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431 - 3.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 375.0
YHH3_k127_4355025_7 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 336.0
YHH3_k127_4355025_8 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 338.0
YHH3_k127_4355025_9 FabA-like domain K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000352 191.0
YHH3_k127_4389085_0 leucine binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003819 293.0
YHH3_k127_4389085_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000001835 205.0
YHH3_k127_4389085_2 cell redox homeostasis K01829 - 5.3.4.1 0.000000000004664 72.0
YHH3_k127_4390015_0 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000778 541.0
YHH3_k127_4398213_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 2.456e-208 659.0
YHH3_k127_4398213_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 490.0
YHH3_k127_4398213_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000000000000000000000000002612 162.0
YHH3_k127_4455525_0 ATP-dependent transcriptional regulator K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 361.0
YHH3_k127_4455525_1 Putative transposase - - - 0.000000000000008188 78.0
YHH3_k127_4457759_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000007491 219.0
YHH3_k127_4457759_1 SNF2 family N-terminal domain - - - 0.0000000000000000000000000000000000000000009746 170.0
YHH3_k127_4500023_0 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 580.0
YHH3_k127_4500023_1 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 354.0
YHH3_k127_4500023_2 Domain of unknown function (DUF3488) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005089 364.0
YHH3_k127_4500023_3 shape-determining protein MreC K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001067 260.0
YHH3_k127_4500023_4 Protein of unknown function DUF58 - - - 0.0000000001545 68.0
YHH3_k127_4513266_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 540.0
YHH3_k127_4513266_1 shikimate 3-dehydrogenase (NADP+) activity K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.000000000000000000000000000000659 125.0
YHH3_k127_4519236_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 562.0
YHH3_k127_4519236_1 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 424.0
YHH3_k127_4519236_2 ribonuclease III activity - - - 0.000000000000000000000004903 106.0
YHH3_k127_4580085_0 MFS/sugar transport protein - - - 4.498e-205 649.0
YHH3_k127_4580085_1 membrane transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 397.0
YHH3_k127_4580085_2 4Fe-4S single cluster domain - - - 0.000000000005037 70.0
YHH3_k127_4623865_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 535.0
YHH3_k127_4623865_1 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000001086 223.0
YHH3_k127_4623865_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000007021 129.0
YHH3_k127_4712045_0 TIGRFAM filamentous haemagglutinin family outer membrane protein - - - 0.00000000008016 66.0
YHH3_k127_4712045_1 Polypeptide-transport-associated domain protein ShlB-type - - - 0.00000001096 68.0
YHH3_k127_4762110_0 MFS/sugar transport protein - - - 8.873e-204 644.0
YHH3_k127_4762110_1 Ion transport protein K08714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005658 256.0
YHH3_k127_477131_0 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 503.0
YHH3_k127_477131_1 Filamentation induced by cAMP protein fic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 384.0
YHH3_k127_4804494_0 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 366.0
YHH3_k127_4804494_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005615 259.0
YHH3_k127_4810694_0 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 602.0
YHH3_k127_4810694_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 587.0
YHH3_k127_4810694_10 Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.00000000000000000000000000000000005152 140.0
YHH3_k127_4810694_11 Tfp pilus assembly protein FimT K02456 - - 0.00000000000000000000000000000001255 132.0
YHH3_k127_4810694_12 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000002423 125.0
YHH3_k127_4810694_14 - - - - 0.00000000000000004963 89.0
YHH3_k127_4810694_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 555.0
YHH3_k127_4810694_3 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 550.0
YHH3_k127_4810694_4 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 472.0
YHH3_k127_4810694_5 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 394.0
YHH3_k127_4810694_6 glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 370.0
YHH3_k127_4810694_7 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 314.0
YHH3_k127_4810694_8 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000001024 178.0
YHH3_k127_4810694_9 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000001428 173.0
YHH3_k127_4830967_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 6.376e-240 750.0
YHH3_k127_4830967_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 511.0
YHH3_k127_4830967_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 463.0
YHH3_k127_4830967_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 295.0
YHH3_k127_4830967_4 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000000004359 218.0
YHH3_k127_4830967_5 Ribosomal protein L17 K02879 - - 0.0000000000000000000000000000000000000000000005243 172.0
YHH3_k127_4830967_6 Aminotransferase class I and II K00817 - 2.6.1.9 0.00000000000000000000000002396 112.0
YHH3_k127_4830967_7 - - - - 0.00000000004552 66.0
YHH3_k127_4840666_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 9.065e-238 742.0
YHH3_k127_4840666_1 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000007509 220.0
YHH3_k127_488753_0 IMP dehydrogenase GMP reductase K00088 - 1.1.1.205 1.079e-211 671.0
YHH3_k127_488753_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 411.0
YHH3_k127_488753_2 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01911 - 6.2.1.26 0.000000000000000000001276 97.0
YHH3_k127_4952189_0 glutamate synthase K00284 - 1.4.7.1 0.0 1926.0
YHH3_k127_4952189_1 PFAM Arginine-tRNA-protein transferase, C terminus K21420 - 2.3.2.29 0.00000000000000000000000001875 119.0
YHH3_k127_4952189_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.000000000000000000001312 96.0
YHH3_k127_4952189_3 Flavin containing amine oxidoreductase K00266 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.4.1.13,1.4.1.14 0.0000000000000000009363 87.0
YHH3_k127_5025332_0 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 503.0
YHH3_k127_5025332_1 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 345.0
YHH3_k127_5025332_2 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 307.0
YHH3_k127_5025332_3 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000006695 265.0
YHH3_k127_5025332_4 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000008417 232.0
YHH3_k127_5025332_5 TIGRFAM anaerobic ribonucleoside-triphosphate reductase activating protein K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000002199 179.0
YHH3_k127_5025332_6 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000001854 152.0
YHH3_k127_5030136_0 PFAM FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 368.0
YHH3_k127_5030136_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 314.0
YHH3_k127_5052153_0 Sulfatase-modifying factor enzyme 1 K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003662 333.0
YHH3_k127_5052153_1 Mechanosensitive ion channel K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009454 277.0
YHH3_k127_5056382_0 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 358.0
YHH3_k127_5056382_1 FGGY family of carbohydrate kinases, C-terminal domain K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008989 309.0
YHH3_k127_5056382_2 - K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 296.0
YHH3_k127_5058750_0 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000009258 222.0
YHH3_k127_5058750_1 COG4166 ABC-type oligopeptide transport system, periplasmic component K15580 - - 0.0000000000000000000002297 99.0
YHH3_k127_5058750_2 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.0000000904 54.0
YHH3_k127_5058750_3 - - - - 0.0000006764 55.0
YHH3_k127_5058750_4 Haem-NO-binding - - - 0.0008835 45.0
YHH3_k127_5081142_0 cell wall glycoprotein biosynthetic process K01809 - 5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007787 421.0
YHH3_k127_5081142_1 symporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 361.0
YHH3_k127_509121_0 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000000001627 205.0
YHH3_k127_509121_1 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000001859 183.0
YHH3_k127_509121_2 UPF0056 membrane protein K05595 - - 0.00000000000000000000000000000000000000000001289 168.0
YHH3_k127_5095479_0 Tetratricopeptide repeat - - - 7.354e-240 752.0
YHH3_k127_5095479_1 Fibronectin type 3 domain - - - 0.0000000000000000000000000000006084 124.0
YHH3_k127_5122620_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 583.0
YHH3_k127_5122620_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 577.0
YHH3_k127_5122620_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000001735 205.0
YHH3_k127_5122620_3 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000002646 176.0
YHH3_k127_5122620_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000003408 76.0
YHH3_k127_5122620_5 Cys/Met metabolism PLP-dependent enzyme - - - 0.0000004035 52.0
YHH3_k127_5128752_0 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile K01241 - 3.2.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 424.0
YHH3_k127_5128752_1 CotH kinase protein K06330 - - 0.0000000000000000000000000000000000000004806 163.0
YHH3_k127_5129521_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.425e-271 847.0
YHH3_k127_5129521_1 ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 374.0
YHH3_k127_5176529_0 Polyphosphate kinase 2 (PPK2) - - - 6.439e-195 619.0
YHH3_k127_5176529_1 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000003671 256.0
YHH3_k127_5176529_2 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000002806 221.0
YHH3_k127_5176529_3 Glyoxalase-like domain - - - 0.000000000000000000000000000000002703 132.0
YHH3_k127_5176529_4 Belongs to the UPF0251 family - - - 0.00000000000000000002025 93.0
YHH3_k127_5176529_5 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis protein - - - 0.0000000000002336 75.0
YHH3_k127_520427_0 NAD(P)-binding Rossmann-like domain K14257 - 1.14.19.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 350.0
YHH3_k127_520427_1 DEAD DEAH box helicase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002481 282.0
YHH3_k127_520427_2 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000000000002086 105.0
YHH3_k127_520427_3 Protein conserved in bacteria - - - 0.0000000000000000000002405 99.0
YHH3_k127_520427_4 Tetratricopeptide repeat - - - 0.00000617 59.0
YHH3_k127_5214500_0 PFAM Glycosyl hydrolase family - - - 0.000000000000000000000000000000000000000000000000000008328 209.0
YHH3_k127_5233029_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 484.0
YHH3_k127_5233029_1 Tetratricopeptide repeat - - - 0.0000000000000005874 85.0
YHH3_k127_5257715_0 Cys/Met metabolism PLP-dependent enzyme K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 524.0
YHH3_k127_5257715_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009074 482.0
YHH3_k127_5257715_10 PFAM Preprotein translocase SecG subunit K03075 - - 0.00000000000000001649 88.0
YHH3_k127_5257715_2 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 304.0
YHH3_k127_5257715_3 Belongs to the precorrin methyltransferase family K13542 - 2.1.1.107,4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006108 271.0
YHH3_k127_5257715_4 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000766 254.0
YHH3_k127_5257715_5 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000001027 256.0
YHH3_k127_5257715_6 Phosphoadenosine phosphosulfate reductase K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000007517 181.0
YHH3_k127_5257715_7 Lrp/AsnC ligand binding domain - - - 0.000000000000000000000000000000000000000000000001528 178.0
YHH3_k127_5257715_8 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000008336 111.0
YHH3_k127_5257715_9 Lysin motif - - - 0.0000000000000000000000004023 113.0
YHH3_k127_5310561_0 Histidine kinase - - - 1.5e-228 722.0
YHH3_k127_5310561_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001222 270.0
YHH3_k127_5313688_0 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000002306 175.0
YHH3_k127_5313688_2 CAAX protease self-immunity - - - 0.0001471 52.0
YHH3_k127_531610_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007238 492.0
YHH3_k127_531610_1 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 331.0
YHH3_k127_531610_2 Domain in cystathionine beta-synthase and other proteins. K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 317.0
YHH3_k127_531610_3 Protein of unknown function, DUF481 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007633 263.0
YHH3_k127_531610_4 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000008692 183.0
YHH3_k127_5316420_0 beta-mannosidase K01192 - 3.2.1.25 0.00000000000000000000000000000000000000000000000000000000000004378 244.0
YHH3_k127_5316420_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000001261 58.0
YHH3_k127_5316420_2 polygalacturonase activity - - - 0.000008779 54.0
YHH3_k127_54105_0 MFS/sugar transport protein K03292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004682 334.0
YHH3_k127_54105_1 Beta-galactosidase - - - 0.000000000000000000000000000000000000000000000000000000000000000003502 240.0
YHH3_k127_54105_2 beta-galactosidase - - - 0.0000000000006743 69.0
YHH3_k127_5436074_0 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 356.0
YHH3_k127_5436074_1 PFAM Glycosyl transferase family 2 - - - 0.0000009923 55.0
YHH3_k127_5499614_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 2.049e-214 673.0
YHH3_k127_5499614_1 Glycosyl Hydrolase Family 88 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001961 291.0
YHH3_k127_5535273_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000108 214.0
YHH3_k127_5535273_1 - - - - 0.000000000000000000000000000000000000000000000000002933 196.0
YHH3_k127_5535273_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000006925 134.0
YHH3_k127_5539981_0 FGGY family of carbohydrate kinases, C-terminal domain K00853 - 2.7.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 539.0
YHH3_k127_5539981_1 Glycosyl hydrolase 36 superfamily, catalytic domain K00702 - 2.4.1.20 0.000000000000000000000000000000000000000000000000000000000000000000004149 238.0
YHH3_k127_5539981_2 Transcriptional regulator K02529 - - 0.000000000000000000000000000000000000000000005629 174.0
YHH3_k127_5539981_3 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.0000000000000000002306 89.0
YHH3_k127_5539981_4 Glycosyl hydrolase 36 superfamily, catalytic domain K00702 - 2.4.1.20 0.00000000000000001968 84.0
YHH3_k127_5573220_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1858.0
YHH3_k127_5573220_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1007.0
YHH3_k127_5573220_10 Forms part of the polypeptide exit tunnel K02926 - - 0.000000000000000000000000000000000000000000000000000000000000707 218.0
YHH3_k127_5573220_11 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000007285 211.0
YHH3_k127_5573220_12 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000001188 194.0
YHH3_k127_5573220_13 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000008788 184.0
YHH3_k127_5573220_14 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000009825 181.0
YHH3_k127_5573220_15 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000000000000007039 157.0
YHH3_k127_5573220_16 Binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000008465 153.0
YHH3_k127_5573220_17 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000001578 147.0
YHH3_k127_5573220_18 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000001885 144.0
YHH3_k127_5573220_19 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000002239 141.0
YHH3_k127_5573220_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.696e-203 644.0
YHH3_k127_5573220_20 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000002601 139.0
YHH3_k127_5573220_21 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000000002146 121.0
YHH3_k127_5573220_22 Ribosomal proteins 50S L24/mitochondrial 39S L24 K02895 - - 0.000000000000000002685 87.0
YHH3_k127_5573220_23 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000001093 83.0
YHH3_k127_5573220_24 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000002067 66.0
YHH3_k127_5573220_3 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 355.0
YHH3_k127_5573220_4 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009467 311.0
YHH3_k127_5573220_5 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002615 281.0
YHH3_k127_5573220_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000564 239.0
YHH3_k127_5573220_7 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000003493 224.0
YHH3_k127_5573220_8 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000004521 223.0
YHH3_k127_5573220_9 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000005983 214.0
YHH3_k127_5573689_0 Alginate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006323 449.0
YHH3_k127_5573689_1 Alpha-L-fucosidase C-terminal domain K01206 - 3.2.1.51 0.000000002205 62.0
YHH3_k127_5584745_0 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 419.0
YHH3_k127_5584745_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004412 392.0
YHH3_k127_5584745_2 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002948 288.0
YHH3_k127_5584745_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.00000000000000000000000000000000000000000000000009611 186.0
YHH3_k127_5584745_4 Hsp20/alpha crystallin family K13993 - - 0.0000000000008483 74.0
YHH3_k127_5584745_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000001689 62.0
YHH3_k127_5590957_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 4.782e-214 672.0
YHH3_k127_5590957_1 Glycosyl hydrolases family 2 K01190 - 3.2.1.23 1.128e-209 676.0
YHH3_k127_5590957_2 Belongs to the glycosyl hydrolase 67 family - - - 0.0000000000000007969 80.0
YHH3_k127_5590957_3 BNR repeat-like domain - - - 0.000000002665 61.0
YHH3_k127_5603780_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 370.0
YHH3_k127_5603780_1 Recombinase - - - 0.0008483 42.0
YHH3_k127_5606056_0 Xylose isomerase domain protein TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003458 252.0
YHH3_k127_5606056_1 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000001362 194.0
YHH3_k127_5620910_0 Major facilitator Superfamily K03292,K16248 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 511.0
YHH3_k127_5620910_1 PFAM glycosyl hydrolase family 88 K15532 - 3.2.1.172 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 509.0
YHH3_k127_5620910_2 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000001062 204.0
YHH3_k127_5620910_3 - - - - 0.00000000000000000000000000000000000000000000000003161 184.0
YHH3_k127_5620910_4 TM2 domain - - - 0.0000000000000000000000000000157 118.0
YHH3_k127_5620910_5 - - - - 0.000000000000000000000000000202 118.0
YHH3_k127_5630532_0 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 3.343e-226 722.0
YHH3_k127_5630532_1 Collagen triple helix repeat (20 copies) - - - 0.000000004827 65.0
YHH3_k127_5632474_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 610.0
YHH3_k127_5632474_1 Diadenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 495.0
YHH3_k127_5632474_2 Belongs to the CinA family K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006924 387.0
YHH3_k127_5632474_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000004886 200.0
YHH3_k127_5632474_4 - - - - 0.00000000000000000001653 106.0
YHH3_k127_5632474_5 - - - - 0.00001102 49.0
YHH3_k127_5632474_6 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA - - - 0.00002287 46.0
YHH3_k127_5632474_7 PFAM PQQ enzyme repeat - - - 0.0002462 50.0
YHH3_k127_5691689_0 protein involved in propionate catabolism K01720 - 4.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 402.0
YHH3_k127_5691689_1 TRAP transporter, 4TM 12TM fusion protein - - - 0.0000000000000000000000000000000000000000000000000000000002987 207.0
YHH3_k127_5695342_0 Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 5.12e-276 886.0
YHH3_k127_5695342_1 Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 355.0
YHH3_k127_5695342_2 Glycoside hydrolase, family 2 - - - 0.00000000000000000000000000000009819 126.0
YHH3_k127_5710198_0 Alpha-tubulin suppressor and related RCC1 domain-containing - - - 0.000000000000000001127 102.0
YHH3_k127_5710198_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000005431 96.0
YHH3_k127_5713044_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 5.366e-262 823.0
YHH3_k127_5713044_1 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 439.0
YHH3_k127_5713044_2 Binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000000001243 190.0
YHH3_k127_5713044_3 Single-stranded DNA-binding protein K03111 - - 0.0000000000000000000000000000000000000000000000009383 178.0
YHH3_k127_5713044_4 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.000000000000000000000000000000000000000000000005991 179.0
YHH3_k127_5713044_5 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000002263 168.0
YHH3_k127_5713044_6 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000001101 140.0
YHH3_k127_5713044_7 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000006526 102.0
YHH3_k127_5713044_8 Ribosomal protein S6 K02990 - - 0.0000000000002844 74.0
YHH3_k127_5717418_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 370.0
YHH3_k127_5717418_1 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007396 342.0
YHH3_k127_5717418_2 - - - - 0.00000000000000000000000000000000000000000000106 173.0
YHH3_k127_5717418_3 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.000000000005811 68.0
YHH3_k127_5723330_0 Belongs to the DegT DnrJ EryC1 family K19430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006809 323.0
YHH3_k127_5723330_1 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000009488 188.0
YHH3_k127_5723330_2 Transfers the fatty acyl group on membrane lipoproteins - - - 0.000000000000000000000000000000000000000000006704 170.0
YHH3_k127_5729405_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 1.123e-254 800.0
YHH3_k127_5729405_1 Saccharopine dehydrogenase C-terminal domain K00290,K13746 - 1.5.1.43,1.5.1.7 4.979e-219 683.0
YHH3_k127_5729405_2 Belongs to the Orn Lys Arg decarboxylase class-II family. NspC subfamily K13747 - 4.1.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005751 511.0
YHH3_k127_5729405_3 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000003114 229.0
YHH3_k127_5749073_0 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007581 494.0
YHH3_k127_5749073_1 AcrB/AcrD/AcrF family K15726 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 483.0
YHH3_k127_5794280_1 Belongs to the heme-copper respiratory oxidase family K15862 - 1.9.3.1 0.00000000000000005332 86.0
YHH3_k127_5794280_3 Protein of unknown function (DUF1559) - - - 0.00000008053 63.0
YHH3_k127_581363_0 Predicted Permease Membrane Region K07085 - - 0.00000000000000000000000000000000000000000000000000000000000000001354 229.0
YHH3_k127_581363_1 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000002972 156.0
YHH3_k127_581363_2 Biopolymer transporter TonB K03832 - - 0.0000000000000000007234 94.0
YHH3_k127_5831592_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000002033 230.0
YHH3_k127_5831592_1 PFAM RhaT l-rhamnose-proton symport 2 K02856 - - 0.0001193 46.0
YHH3_k127_5836337_0 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 2.034e-210 671.0
YHH3_k127_5836337_1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000000000000003531 138.0
YHH3_k127_5836337_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000004853 121.0
YHH3_k127_5836337_3 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.000000000000003668 80.0
YHH3_k127_5957119_0 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009935 459.0
YHH3_k127_5957119_1 Lysine-2,3-aminomutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 354.0
YHH3_k127_5957119_2 polysaccharide catabolic process K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000001053 241.0
YHH3_k127_5957119_3 DNA-binding transcription factor activity K03892 - - 0.000000000000000001437 89.0
YHH3_k127_5961271_0 PFAM Integrase catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 508.0
YHH3_k127_5961271_1 PFAM IstB domain protein ATP-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 295.0
YHH3_k127_5961271_2 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002192 235.0
YHH3_k127_5973390_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1231.0
YHH3_k127_5973390_1 PFAM glutamine amidotransferase class-I K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001683 277.0
YHH3_k127_5973390_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000001232 194.0
YHH3_k127_6001777_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 593.0
YHH3_k127_6001777_1 Histidine kinase - - - 0.0000000000122 66.0
YHH3_k127_6005961_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 399.0
YHH3_k127_6005961_1 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000006059 216.0
YHH3_k127_601099_0 MotA/TolQ/ExbB proton channel family K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000002798 239.0
YHH3_k127_601099_1 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000006347 203.0
YHH3_k127_601099_2 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000000003554 149.0
YHH3_k127_601099_3 TonB C terminal K03646,K03832 - - 0.00000000000000000002236 102.0
YHH3_k127_601099_4 - - - - 0.000000000001754 76.0
YHH3_k127_601099_5 - - - - 0.0001124 47.0
YHH3_k127_6013552_0 Binding-protein-dependent transport system inner membrane component K02011 - - 2.579e-228 720.0
YHH3_k127_6086808_0 electron transfer activity K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 460.0
YHH3_k127_6086808_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 389.0
YHH3_k127_6086808_2 4 iron, 4 sulfur cluster binding K03737 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000001256 193.0
YHH3_k127_6102022_0 Domain of unknown function (DUF3390) K18929 - - 5.128e-210 665.0
YHH3_k127_6102022_1 Cysteine-rich domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009366 331.0
YHH3_k127_6102022_2 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007903 285.0
YHH3_k127_6102022_3 Alginate lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001063 267.0
YHH3_k127_6102022_4 FGGY family of carbohydrate kinases, N-terminal domain K00848,K00879 - 2.7.1.5,2.7.1.51 0.00000000000000000000000000000000000000000000000000000000002669 212.0
YHH3_k127_6102022_5 Uncharacterized protein domain (DUF2202) - - - 0.000000000000000000000000000000000000000000006331 171.0
YHH3_k127_6102022_6 LUD domain K00782 - - 0.0000000000000000000000000000000000000000116 160.0
YHH3_k127_6102022_7 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000001464 111.0
YHH3_k127_611227_0 PFAM tRNA synthetase class II (G H P and S) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 511.0
YHH3_k127_611227_1 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002868 288.0
YHH3_k127_6116899_0 Carbohydrate esterase, sialic acid-specific acetylesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001324 259.0
YHH3_k127_6116899_1 Uncharacterised protein conserved in bacteria (DUF2326) - - - 0.00000000001157 72.0
YHH3_k127_6116899_2 Domain of unknown function (DUF5127) - - - 0.0001177 54.0
YHH3_k127_6160355_0 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 346.0
YHH3_k127_6160355_1 Serine acetyltransferase, N-terminal K00640 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009058,GO:0009069,GO:0009070,GO:0009314,GO:0009333,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016053,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 293.0
YHH3_k127_6160355_2 transmembrane transport K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006993 279.0
YHH3_k127_6160355_3 rRNA Methylase - - - 0.0000000000000000000000000000000000000004819 156.0
YHH3_k127_6160355_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000006057 49.0
YHH3_k127_6209136_0 cobalamin-transporting ATPase activity K02014 - - 0.00000000000000000000000000000000000000000000000000007986 198.0
YHH3_k127_6234517_0 Anticodon binding domain K01880 - 6.1.1.14 4.975e-242 760.0
YHH3_k127_6234517_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004928 592.0
YHH3_k127_6234517_2 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000004838 200.0
YHH3_k127_6234517_3 succinylglutamate desuccinylase aspartoacylase - - - 0.0000000000000000000000000000000000000000003771 167.0
YHH3_k127_6234517_4 Histidine kinase - - - 0.00000000000000000000000009597 111.0
YHH3_k127_6250514_0 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000000000000000000004574 157.0
YHH3_k127_6250514_1 Putative peptidoglycan binding domain - - - 0.0000000000000000000000002851 108.0
YHH3_k127_6250514_4 - - - - 0.00000000000000002012 89.0
YHH3_k127_6252985_0 helicase activity K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 453.0
YHH3_k127_6252985_1 sialic acid-specific 9-O-acetylesterase K05970 - 3.1.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 408.0
YHH3_k127_6285196_0 protein targeting K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 4.126e-197 629.0
YHH3_k127_6295642_0 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000008366 211.0
YHH3_k127_6295642_1 PD-(D/E)XK nuclease superfamily K03582,K16898 - 3.1.11.5,3.6.4.12 0.0000000000000000000000000000000235 132.0
YHH3_k127_6300915_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 6.148e-238 745.0
YHH3_k127_6300915_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 540.0
YHH3_k127_6300915_2 Beta-Casp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 447.0
YHH3_k127_6300915_3 Sigma-70 region 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 402.0
YHH3_k127_6300915_4 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000006571 239.0
YHH3_k127_6300915_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000001387 161.0
YHH3_k127_6300915_6 ApaG domain K06195 - - 0.0000000000000000000000000000000003593 136.0
YHH3_k127_6321314_0 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 323.0
YHH3_k127_6321314_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000001093 86.0
YHH3_k127_632601_0 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000002137 244.0
YHH3_k127_632601_1 PFAM carbon starvation protein CstA K06200 - - 0.000000000000000000000000000000000000000000000000000000000000001948 224.0
YHH3_k127_632601_2 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00381 - 1.8.1.2 0.0000000000000000000000000000000000002472 144.0
YHH3_k127_6330945_0 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007805 268.0
YHH3_k127_6330945_1 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000006526 243.0
YHH3_k127_6330945_2 RNA recognition motif - - - 0.0000000000000000000000007995 106.0
YHH3_k127_6330945_3 helix_turn_helix, Arsenical Resistance Operon Repressor K22042 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000003579 105.0
YHH3_k127_6330945_4 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K00406 - - 0.000000000000000000003162 95.0
YHH3_k127_6332057_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003792 504.0
YHH3_k127_6332057_1 Biotin-lipoyl like K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007063 365.0
YHH3_k127_6368798_0 PFAM Formylglycine-generating sulfatase enzyme K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 407.0
YHH3_k127_6368798_1 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 326.0
YHH3_k127_6368798_2 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 291.0
YHH3_k127_6368798_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000001433 213.0
YHH3_k127_6385583_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008276 595.0
YHH3_k127_6385583_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 460.0
YHH3_k127_6475801_0 4 iron, 4 sulfur cluster binding K03737 - 1.2.7.1 0.0 1199.0
YHH3_k127_6475801_1 4 iron, 4 sulfur cluster binding K03737 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 458.0
YHH3_k127_6475801_2 electron transfer activity K03616 - - 0.0000000000000000000000000000000000000000000000000000000000000000831 223.0
YHH3_k127_6483627_0 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 463.0
YHH3_k127_6483627_1 Binding-protein-dependent transport system inner membrane component K11071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 324.0
YHH3_k127_6483627_2 Binding-protein-dependent transport system inner membrane component K11070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 294.0
YHH3_k127_6483627_3 Protein of unknown function (DUF3450) - - - 0.000000000000000000000000001332 122.0
YHH3_k127_6483627_4 Bacterial extracellular solute-binding protein K11069 - - 0.00000000000000000001393 93.0
YHH3_k127_6549301_0 AAA domain K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 496.0
YHH3_k127_6549301_1 Sodium:sulfate symporter transmembrane region K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 373.0
YHH3_k127_6549301_2 Belongs to the glycosyl hydrolase 43 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006337 332.0
YHH3_k127_6572033_0 Glycoside hydrolase, family 2 - - - 8.483e-303 946.0
YHH3_k127_6577974_0 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001504 242.0
YHH3_k127_6577974_1 amp-dependent synthetase and ligase - - - 0.000003566 55.0
YHH3_k127_6581414_0 AAA domain K06873 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 466.0
YHH3_k127_6581414_1 Phosphate acetyl/butaryl transferase K00625 - 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 359.0
YHH3_k127_6581414_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 306.0
YHH3_k127_6581414_3 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000001805 187.0
YHH3_k127_6581414_4 Belongs to the anti-sigma-factor antagonist family K06378 - - 0.000001214 55.0
YHH3_k127_6628790_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 446.0
YHH3_k127_6628790_1 Udp N-acetylglucosamine O-acyltransferase; Domain 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005661 257.0
YHH3_k127_6628790_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000654 248.0
YHH3_k127_6628790_3 Belongs to the PdxA family K00097 - 1.1.1.262 0.0000000000000000000000000000000007897 134.0
YHH3_k127_6628790_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000001137 83.0
YHH3_k127_6633519_0 Aminotransferase class I and II K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006729 539.0
YHH3_k127_6633519_1 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000004447 230.0
YHH3_k127_6633519_2 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000006177 153.0
YHH3_k127_666502_0 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 543.0
YHH3_k127_666502_1 Hypothetical methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 397.0
YHH3_k127_666502_2 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004976 321.0
YHH3_k127_668585_0 sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 539.0
YHH3_k127_668585_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 508.0
YHH3_k127_668585_2 ThiF family K22132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002815 273.0
YHH3_k127_668585_3 Porphobilinogen deaminase, dipyromethane cofactor binding domain K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000001025 269.0
YHH3_k127_668585_4 Represses a number of genes involved in the response to DNA damage (SOS response) K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000004018 266.0
YHH3_k127_668585_5 Uroporphyrinogen-III synthase HemD K13542 - 2.1.1.107,4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000101 219.0
YHH3_k127_668585_6 acetolactate synthase K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000005445 204.0
YHH3_k127_668585_7 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000001249 201.0
YHH3_k127_6693046_0 E1-E2 ATPase K01533 - 3.6.3.4 5.112e-199 646.0
YHH3_k127_6693046_1 cytochrome c oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003771 573.0
YHH3_k127_6693046_2 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000003799 233.0
YHH3_k127_6693046_3 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000000000000000000000000000000007123 206.0
YHH3_k127_6693046_4 O-Antigen ligase - - - 0.000000000000000000000000000000005416 145.0
YHH3_k127_6696990_0 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 548.0
YHH3_k127_6696990_1 dUTPase - - - 0.00000000000000000000000000000000000000000000000000000000006406 209.0
YHH3_k127_6696990_2 membrane protein (homolog of Drosophila rhomboid) - - - 0.00000000000000000000000000000000000000000000007008 171.0
YHH3_k127_6714674_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 313.0
YHH3_k127_6714674_1 AcrB/AcrD/AcrF family K03296,K18138 - - 0.0000000000000000000000000000000000000000000000000000000000000000006159 231.0
YHH3_k127_6714674_2 marr family - - - 0.0000009366 52.0
YHH3_k127_6730550_0 Putative neutral zinc metallopeptidase K06973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001844 262.0
YHH3_k127_6730550_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000003661 244.0
YHH3_k127_6730550_2 cobalamin (vitamin B12) biosynthesis CbiX - - - 0.00000000000000000000000000000000000000000000000000000000000000000004394 239.0
YHH3_k127_6730550_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000312 179.0
YHH3_k127_6739818_0 EamA-like transporter family K03298 - - 0.00000000000000000000000000000004046 136.0
YHH3_k127_6739818_1 TonB dependent receptor K02014 - - 0.0000004519 63.0
YHH3_k127_6754198_0 Thiamine pyrophosphate enzyme, central domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 542.0
YHH3_k127_6773288_0 DNA polymerase III - - - 0.00000000000000000000000000000000000002728 149.0
YHH3_k127_6773288_1 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 GO:0001558,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019222,GO:0019439,GO:0022607,GO:0030308,GO:0032991,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0040008,GO:0042802,GO:0042803,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044877,GO:0045926,GO:0046483,GO:0046700,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051259,GO:0051291,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000002518 127.0
YHH3_k127_6773288_2 PIN domain - - - 0.000000000000000000000000007697 114.0
YHH3_k127_6828705_0 peptidase M42 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 333.0
YHH3_k127_6828705_1 Histidine biosynthesis protein K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000009013 244.0
YHH3_k127_6828705_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000002251 203.0
YHH3_k127_6857379_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1072.0
YHH3_k127_6857379_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 522.0
YHH3_k127_6857379_2 TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 486.0
YHH3_k127_6857379_3 Cation transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000756 471.0
YHH3_k127_6857379_4 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 334.0
YHH3_k127_6857379_5 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000001642 215.0
YHH3_k127_6857379_6 ABC-type uncharacterized transport system - - - 0.000000000000000003572 91.0
YHH3_k127_6862198_0 Domain of unknown function (DUF4956) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001882 236.0
YHH3_k127_6862198_1 PFAM secretion protein HlyD family protein K01993 - - 0.00000000000000000000000000000000000003981 156.0
YHH3_k127_6862198_2 VTC domain - - - 0.00000000000000000003724 91.0
YHH3_k127_6878498_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 376.0
YHH3_k127_6878498_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 292.0
YHH3_k127_6878498_2 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001472 252.0
YHH3_k127_6878498_3 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000001311 152.0
YHH3_k127_6878498_4 Serine acetyltransferase, N-terminal K00640 - 2.3.1.30 0.0000000000000000000004599 96.0
YHH3_k127_6906942_0 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008332 390.0
YHH3_k127_6906942_1 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000091 303.0
YHH3_k127_6906942_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002297 271.0
YHH3_k127_6906942_3 ATPases associated with a variety of cellular activities K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000007179 228.0
YHH3_k127_6906942_4 Ferritin-like domain - - - 0.00000000000000000000000000000000000000000000000000006163 192.0
YHH3_k127_6906942_5 Lysin motif - - - 0.000000000000000000000000000000000000000000000000003035 191.0
YHH3_k127_6906942_6 membrane transporter protein K07090 - - 0.00000111 51.0
YHH3_k127_6925469_0 COG1473 Metal-dependent amidase aminoacylase carboxypeptidase K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 299.0
YHH3_k127_6925469_1 Domain of unknown function (DUF4214) - - - 0.00000000000000000000427 104.0
YHH3_k127_6946981_0 Insulinase (Peptidase family M16) K07263 - - 1.454e-216 704.0
YHH3_k127_6946981_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 337.0
YHH3_k127_6946981_2 MobA-like NTP transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003662 267.0
YHH3_k127_6946981_3 Belongs to the bacterial ribosomal protein bL31 family K02909 - - 0.00000000000000000000000000000002936 126.0
YHH3_k127_6946981_4 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000004083 96.0
YHH3_k127_6946981_5 Protein of unknown function (DUF983) - - - 0.0000000000000000001616 94.0
YHH3_k127_6946981_6 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000000006736 80.0
YHH3_k127_6950247_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 1.121e-300 952.0
YHH3_k127_6950247_1 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007331 304.0
YHH3_k127_6950247_10 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000000000005438 91.0
YHH3_k127_6950247_11 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000002336 74.0
YHH3_k127_6950247_12 Protein of unknown function (DUF4013) - - - 0.000000000007236 74.0
YHH3_k127_6950247_13 - - - - 0.000000001042 68.0
YHH3_k127_6950247_14 chitin catabolic process K01233 - 3.2.1.132 0.00000001973 63.0
YHH3_k127_6950247_15 Helix-turn-helix domain - - - 0.000003105 54.0
YHH3_k127_6950247_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 314.0
YHH3_k127_6950247_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001192 293.0
YHH3_k127_6950247_4 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002495 282.0
YHH3_k127_6950247_5 cell wall hydrolase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000009097 268.0
YHH3_k127_6950247_6 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000003718 261.0
YHH3_k127_6950247_7 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000005538 198.0
YHH3_k127_6950247_8 macromolecule localization K01992,K09690,K09691,K09692 - - 0.000000000000000000000000000000000000000000000000000001462 201.0
YHH3_k127_6950247_9 Putative regulatory protein - - - 0.000000000000000000009368 94.0
YHH3_k127_695300_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 5.814e-304 944.0
YHH3_k127_6964967_0 Tetrapyrrole (Corrin/Porphyrin) Methylases K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000003884 244.0
YHH3_k127_6964967_1 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000009463 198.0
YHH3_k127_6964967_2 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000005583 158.0
YHH3_k127_6970462_0 Type I phosphodiesterase / nucleotide pyrophosphatase K01133 - 3.1.6.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 396.0
YHH3_k127_6970462_1 HipA domain protein K07154 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000001208 210.0
YHH3_k127_6970462_2 Bacterial regulatory proteins, lacI family - - - 0.000000000000000000000000000000000000000000000000004691 197.0
YHH3_k127_6970462_3 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000002581 146.0
YHH3_k127_6970462_4 TonB-dependent Receptor Plug Domain - - - 0.00000000005372 66.0
YHH3_k127_6974945_0 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004798 259.0
YHH3_k127_6974945_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005637 255.0
YHH3_k127_6974945_2 UreD urease accessory protein - - - 0.00000000000000000000000001583 119.0
YHH3_k127_6974945_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA - - - 0.0000000000000000000000001061 113.0
YHH3_k127_6974945_4 Belongs to the CinA family K03742 - 3.5.1.42 0.000000000000000000000002352 104.0
YHH3_k127_6974945_5 Urease accessory protein K03189 GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019627,GO:0034641,GO:0043603,GO:0044237,GO:0044281,GO:0071704,GO:0071941,GO:1901564 - 0.0007745 42.0
YHH3_k127_6984050_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 292.0
YHH3_k127_6984050_1 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.00000000000000000000000000000000000000000007135 173.0
YHH3_k127_6984050_2 AMP-binding enzyme C-terminal domain K01911 - 6.2.1.26 0.0000000000000000000000000000000000000006915 161.0
YHH3_k127_702440_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 369.0
YHH3_k127_702440_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 349.0
YHH3_k127_702440_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 319.0
YHH3_k127_702440_3 PFAM ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 305.0
YHH3_k127_702440_4 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009363 285.0
YHH3_k127_702440_5 Trehalose utilisation - - - 0.000000000000000000000000000000000000000000000000000000000000000001491 235.0
YHH3_k127_702440_6 Bacterial extracellular solute-binding proteins, family 3 - - - 0.00000000000000000000000000000000000000000000002288 174.0
YHH3_k127_702440_7 Glycosyl hydrolases family 43 - - - 0.000003214 49.0
YHH3_k127_7025987_0 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 291.0
YHH3_k127_7025987_1 Cytidylyltransferase K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000001436 237.0
YHH3_k127_7025987_2 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001043 232.0
YHH3_k127_7025987_3 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000000001235 182.0
YHH3_k127_7025987_4 Ribosomal protein S16 K02959 - - 0.000000000000000000000000006074 112.0
YHH3_k127_7025987_5 SUF system FeS assembly protein, NifU family K04488 - - 0.000000000000000000000005645 106.0
YHH3_k127_7025987_6 Amidohydrolase K07045 - - 0.0000000000002022 72.0
YHH3_k127_7032151_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 1.871e-227 723.0
YHH3_k127_7032151_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 335.0
YHH3_k127_7032151_2 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004376 248.0
YHH3_k127_7032151_3 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000001623 206.0
YHH3_k127_7032151_4 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000002756 177.0
YHH3_k127_7032151_5 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000009115 147.0
YHH3_k127_7044243_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 490.0
YHH3_k127_7044243_1 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 339.0
YHH3_k127_7070177_0 AcrB/AcrD/AcrF family - - - 0.0 1322.0
YHH3_k127_7070177_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000004814 114.0
YHH3_k127_7077050_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02004,K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 397.0
YHH3_k127_7077050_1 Peptidase M50 K16922 - - 0.00000000001245 66.0
YHH3_k127_7081436_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005045 550.0
YHH3_k127_7081436_1 glycolate biosynthetic process K01091 - 3.1.3.18 0.00000000000000000000000000792 115.0
YHH3_k127_7083352_0 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006716 469.0
YHH3_k127_7083352_1 PFAM glycoside hydrolase, family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 391.0
YHH3_k127_7083352_2 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000000000000000000000008349 136.0
YHH3_k127_7083956_0 Voltage gated chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005776 610.0
YHH3_k127_7083956_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001127 288.0
YHH3_k127_7083956_2 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000007307 241.0
YHH3_k127_7083956_3 Belongs to the methyltransferase superfamily K07444 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000001286 103.0
YHH3_k127_7085637_0 alcohol dehydrogenase K18120,K19954 - 1.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000966 363.0
YHH3_k127_7085637_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714,K22397 - 4.1.2.28,4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000003194 251.0
YHH3_k127_7085637_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000002976 81.0
YHH3_k127_7133791_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004809 526.0
YHH3_k127_7133791_1 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 404.0
YHH3_k127_7137667_0 General secretory system II protein E domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004972 535.0
YHH3_k127_7137667_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 404.0
YHH3_k127_7143829_0 TIGRFAM RNA polymerase sigma-54 factor, RpoN K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 514.0
YHH3_k127_7143829_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005343 372.0
YHH3_k127_7143829_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000002246 115.0
YHH3_k127_7143829_3 PFAM Peptidase M22, glycoprotease K14742 - - 0.0000000002504 69.0
YHH3_k127_7150913_0 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 4.789e-213 668.0
YHH3_k127_7150913_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000001625 251.0
YHH3_k127_7150913_2 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 0.0000000000001176 73.0
YHH3_k127_7159948_0 TIGRFAM glutamate synthases, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 8.134e-237 740.0
YHH3_k127_7159948_1 DEAD DEAH box helicase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 443.0
YHH3_k127_7159948_2 Peptidyl-prolyl cis-trans K03773 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0042597,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:0140096,GO:1901363,GO:1901564 5.2.1.8 0.0000000000000000000000000000000000000000000000000171 191.0
YHH3_k127_7159948_3 Glutamate synthase K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.00000006228 54.0
YHH3_k127_7187092_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 1.399e-197 623.0
YHH3_k127_7187092_1 dipeptide transport K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 541.0
YHH3_k127_7187092_2 Binding-protein-dependent transport system inner membrane component K12369 - - 0.0000000000000000000000000000000000000000000000000000000000168 220.0
YHH3_k127_7187092_3 With GsiABD is involved in the transport of glutathione into the cell K13891 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000001696 52.0
YHH3_k127_7187092_4 hmm tigr00688 K05786 - - 0.000134 44.0
YHH3_k127_7195583_0 Methionine synthase B12-binding module cap domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001102 259.0
YHH3_k127_7195583_1 PFAM Methanol-cobalamin methyltransferase B subunit K04480 - 2.1.1.90 0.00000000000000000000000000000000000000000000000000000000001059 213.0
YHH3_k127_7292933_0 Cation transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002881 287.0
YHH3_k127_7292933_1 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000001561 164.0
YHH3_k127_7331994_0 Glutaminase - - - 8.825e-285 885.0
YHH3_k127_7331994_1 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000001999 165.0
YHH3_k127_7331994_2 membrane K13277,K15125,K15539 - - 0.00000000000000000003285 96.0
YHH3_k127_7331994_3 Protein of unknown function (DUF3307) - - - 0.000001923 54.0
YHH3_k127_7337999_0 Domain of unknown function K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 411.0
YHH3_k127_7337999_1 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000002206 136.0
YHH3_k127_7337999_2 Formamidopyrimidine-DNA glycosylase H2TH domain - - - 0.0000000000000000000000003006 105.0
YHH3_k127_7341308_0 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 338.0
YHH3_k127_7341308_1 UTP--glucose-1-phosphate uridylyltransferase K00972,K12447 - 2.7.7.23,2.7.7.64,2.7.7.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000198 263.0
YHH3_k127_7341308_2 Septum formation initiator - - - 0.0000000000001398 74.0
YHH3_k127_740613_0 Heat shock 70 kDa protein K04043 - - 3.024e-278 868.0
YHH3_k127_740613_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K18707 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035598,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603 483.0
YHH3_k127_740613_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000242 252.0
YHH3_k127_740613_3 PFAM peptidase S16 lon domain protein K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000003184 169.0
YHH3_k127_740613_4 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000223 131.0
YHH3_k127_740613_6 Endonuclease Exonuclease Phosphatase K07004 - - 0.00000000000000000001003 102.0
YHH3_k127_740613_7 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000533 83.0
YHH3_k127_740613_8 Prokaryotic N-terminal methylation motif - - - 0.000000001735 65.0
YHH3_k127_740613_9 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000006579 54.0
YHH3_k127_7420970_0 Aldehyde dehydrogenase family K04021 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 568.0
YHH3_k127_7420970_1 Acetokinase family K00925,K19697 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.1,2.7.2.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 474.0
YHH3_k127_7420970_10 PFAM Ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.0000000000000000004013 89.0
YHH3_k127_7420970_11 Sulfatase-modifying factor enzyme 1 K18912 - 1.14.99.50 0.000002602 49.0
YHH3_k127_7420970_2 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 412.0
YHH3_k127_7420970_3 Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 340.0
YHH3_k127_7420970_4 Belongs to the LDH MDH superfamily K00016 - 1.1.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 314.0
YHH3_k127_7420970_5 Ethanolamine utilisation protein EutN/carboxysome K04028 - - 0.00000000000000000000000000000000000000002643 154.0
YHH3_k127_7420970_6 BMC - - - 0.0000000000000000000000000000000001022 134.0
YHH3_k127_7420970_7 BMC K04027 - - 0.000000000000000000000000000000002829 130.0
YHH3_k127_7420970_8 BMC - - - 0.000000000000000000000000000004248 122.0
YHH3_k127_7420970_9 Ethanolamine utilisation protein EutN/carboxysome - - - 0.0000000000000000000001421 101.0
YHH3_k127_7425060_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 377.0
YHH3_k127_7425060_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005104 249.0
YHH3_k127_7427201_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 8.741e-201 632.0
YHH3_k127_7427201_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000004626 239.0
YHH3_k127_7445097_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007808 284.0
YHH3_k127_7445097_1 alpha-L-arabinofuranosidase - - - 0.00000000000000000000000000000000009446 145.0
YHH3_k127_7468900_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 349.0
YHH3_k127_7468900_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 373.0
YHH3_k127_7468900_2 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000002288 221.0
YHH3_k127_7468900_4 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.0005208 49.0
YHH3_k127_74902_0 Involved in the tonB-independent uptake of proteins - - - 4.181e-315 1008.0
YHH3_k127_74902_1 GAF domain K08968 - 1.8.4.14 0.000000000000000000000000000000000000000000000000000000001062 204.0
YHH3_k127_74902_2 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000001314 195.0
YHH3_k127_74902_3 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K00406,K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000625 116.0
YHH3_k127_74902_4 domain, Protein K19231 - - 0.0003972 53.0
YHH3_k127_7495253_0 PFAM glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003299 473.0
YHH3_k127_7495253_1 ATP-binding protein K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 402.0
YHH3_k127_7495253_2 Glycosyl transferase, group K20444 - - 0.0000000000000000000000000000001039 139.0
YHH3_k127_7495350_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000002374 230.0
YHH3_k127_7495350_1 ACT domain protein - - - 0.0000000000000000000000000000000000000000014 161.0
YHH3_k127_7495350_2 4Fe-4S single cluster domain of Ferredoxin I K05337 - - 0.0000000000000000000000000000000000000002535 151.0
YHH3_k127_7495350_3 Rhomboid family - - - 0.000000000000000000000000000000000374 143.0
YHH3_k127_7507041_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 411.0
YHH3_k127_7507041_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 355.0
YHH3_k127_7507041_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000841 321.0
YHH3_k127_7507041_3 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006582 292.0
YHH3_k127_7507041_4 Outer membrane lipoprotein K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000002994 248.0
YHH3_k127_7507041_5 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000002938 94.0
YHH3_k127_7507041_6 - - - - 0.0000000000000000006766 96.0
YHH3_k127_7507041_7 YmdB-like protein K09769 - - 0.0000000000000004003 79.0
YHH3_k127_7517380_0 xylanase chitin deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000000000000006261 164.0
YHH3_k127_7517640_0 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000975 438.0
YHH3_k127_7517640_1 acid phosphatase activity K01179,K21449 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000005729 219.0
YHH3_k127_7517640_2 Ethanolamine utilisation protein EutQ K06995 - - 0.00000000000000000000000007054 107.0
YHH3_k127_7523961_0 Converts the aldose L-fucose into the corresponding ketose L-fuculose - - - 6.968e-234 730.0
YHH3_k127_7523961_1 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 295.0
YHH3_k127_7530706_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1301.0
YHH3_k127_7530706_1 FeS assembly SUF system protein SufT - - - 0.0000000000000000000000000000000000000000000000000000000000001755 216.0
YHH3_k127_7530706_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000007629 179.0
YHH3_k127_7530706_3 Uncharacterized protein family (UPF0051) K09015 - - 0.000000000000001956 77.0
YHH3_k127_7545772_0 ABC1 family K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 494.0
YHH3_k127_7545772_1 Oxygen tolerance - - - 0.00000000000000000000000000000000000002853 162.0
YHH3_k127_7545772_2 granule-associated protein - - - 0.00000000000000001726 86.0
YHH3_k127_7545772_3 Required for the activity of the bacterial periplasmic transport system of putrescine K11069 - - 0.00000000001651 66.0
YHH3_k127_7545772_4 BatE protein - - - 0.000000000151 70.0
YHH3_k127_7553289_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 428.0
YHH3_k127_7553289_1 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 300.0
YHH3_k127_7553289_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 291.0
YHH3_k127_7553289_3 - - - - 0.0002699 44.0
YHH3_k127_7575801_0 CotH kinase protein - - - 0.000003338 58.0
YHH3_k127_7601352_0 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01615 - 4.1.1.70 4.759e-306 945.0
YHH3_k127_7601352_1 acyl-CoA dehydrogenase K16173 - 1.3.99.32 0.0000000000000000000000000000000000000000000000000000000000131 208.0
YHH3_k127_7603196_0 Heparinase II/III-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 418.0
YHH3_k127_7603196_1 4-phosphoerythronate dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007741 310.0
YHH3_k127_7651685_0 Acetyltransferase (GNAT) domain K14682 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 395.0
YHH3_k127_7651685_1 tyrosine recombinase K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 340.0
YHH3_k127_7651685_2 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 302.0
YHH3_k127_7651685_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000001508 241.0
YHH3_k127_7651685_4 C4-type zinc ribbon domain K07164 - - 0.00000000000000000000000001681 115.0
YHH3_k127_7656425_0 SMART Nucleotide binding protein PINc - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008604 353.0
YHH3_k127_7656425_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000002488 247.0
YHH3_k127_7656425_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000005274 189.0
YHH3_k127_7656425_3 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000001438 168.0
YHH3_k127_7656425_4 peptidase - - - 0.000000000000000000000000000000000000000001966 172.0
YHH3_k127_7670135_0 ABC transporter K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 331.0
YHH3_k127_7670135_1 Kdo2-lipid A biosynthetic process K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 301.0
YHH3_k127_7670135_2 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000001386 84.0
YHH3_k127_7692061_0 Tryptophan halogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006344 437.0
YHH3_k127_7692061_1 acyl carrier protein K02078 - - 0.00000000000000000001843 93.0
YHH3_k127_7692061_2 Beta-ketoacyl synthase, C-terminal domain K00647,K09458 - 2.3.1.179,2.3.1.41 0.0000000000000004802 90.0
YHH3_k127_7692061_3 Pfam SNARE associated Golgi protein - - - 0.0000001033 63.0
YHH3_k127_7703967_0 RnfC Barrel sandwich hybrid domain K03615 - - 0.000000000000000000000000000000008282 129.0
YHH3_k127_7704442_0 TIGRFAM The (Largely Gram-negative Bacterial) Hydrophobe Amphiphile Efflux-1 (HAE1) Family K03296,K18138 - - 1.743e-263 818.0
YHH3_k127_7704442_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 530.0
YHH3_k127_7704442_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000001056 133.0
YHH3_k127_7740199_0 AAA ATPase K03581 - 3.1.11.5 2.055e-204 653.0
YHH3_k127_7740199_1 PFAM Haloacid dehalogenase domain protein hydrolase K01091 - 3.1.3.18 0.00000000000000000001169 94.0
YHH3_k127_780464_0 Amino acid kinase family K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 332.0
YHH3_k127_780464_1 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000759 300.0
YHH3_k127_780464_2 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000004049 143.0
YHH3_k127_782337_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000008199 191.0
YHH3_k127_7853651_0 zinc ion binding - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000001087 246.0
YHH3_k127_7853651_1 lipolytic protein G-D-S-L family K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.000000000000000000000000000000000000000000000000000007973 192.0
YHH3_k127_7857397_0 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001181 284.0
YHH3_k127_7857397_1 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004513 263.0
YHH3_k127_7857397_2 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000001309 198.0
YHH3_k127_7857397_3 - - - - 0.0000006313 59.0
YHH3_k127_7879631_0 Bacterial alpha-L-rhamnosidase C-terminal domain - - - 2.37e-256 844.0
YHH3_k127_7879631_1 Glycogen debranching enzyme K05989 - 3.2.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 555.0
YHH3_k127_7879631_2 Acetyl xylan esterase (AXE1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 421.0
YHH3_k127_7880115_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 509.0
YHH3_k127_7880115_1 Prokaryotic dksA/traR C4-type zinc finger - - - 0.00000000000000000000000000000000000000000000000002846 191.0
YHH3_k127_7880115_2 Signal peptidase (SPase) II K03101 - 3.4.23.36 0.000000000000000000000000000000003224 138.0
YHH3_k127_7954320_0 Biotin carboxylase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 436.0
YHH3_k127_7954320_1 ABC-type uncharacterized transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 308.0
YHH3_k127_7954320_2 Domain of unknown function (DUF4340) - - - 0.00000000000000000000000000000000000000000000000000000000007534 227.0
YHH3_k127_7954320_3 Biotin-requiring enzyme - - - 0.000000000000000000000000000000000000000002525 161.0
YHH3_k127_7954320_4 AsmA-like C-terminal region - - - 0.0000000000000000000001038 115.0
YHH3_k127_7997544_0 HELICc2 K03722 - 3.6.4.12 3.663e-196 633.0
YHH3_k127_7997544_1 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000002265 147.0
YHH3_k127_7997544_2 SNF2 family N-terminal domain - - - 0.000000000002031 69.0
YHH3_k127_7997544_3 C4-type zinc ribbon domain K07164 - - 0.0000004006 56.0
YHH3_k127_8008524_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 377.0
YHH3_k127_8010501_0 COG1914 Mn2 and Fe2 transporters of the NRAMP family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 307.0
YHH3_k127_8010501_1 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000007162 179.0
YHH3_k127_8010501_2 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000691 112.0
YHH3_k127_8018798_0 TRCF - - - 0.0 1054.0
YHH3_k127_8018798_1 AAA domain K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 360.0
YHH3_k127_8018798_2 peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 306.0
YHH3_k127_8018798_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000003926 201.0
YHH3_k127_8018798_4 Transfers the fatty acyl group on membrane lipoproteins - - - 0.00000000000000000000000000001045 130.0
YHH3_k127_8018798_5 CotH kinase protein - - - 0.0001659 51.0
YHH3_k127_8022399_0 - - - - 0.000000000000000000000000000000000000006926 151.0
YHH3_k127_810231_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000004839 178.0
YHH3_k127_8115041_0 Belongs to the glycosyl hydrolase family 6 K01179,K03932 - 3.2.1.4 0.0000000000000000000000000000000000000000002131 180.0
YHH3_k127_8125792_0 ATPase, AAA superfamily K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007536 445.0
YHH3_k127_8125792_1 cAMP biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000895 442.0
YHH3_k127_8125792_2 PIN domain - - - 0.000000000001309 72.0
YHH3_k127_813551_0 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006108 314.0
YHH3_k127_813551_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000005724 207.0
YHH3_k127_8142290_0 ABC transporter K06147 - - 4.43e-201 644.0
YHH3_k127_8142290_1 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 559.0
YHH3_k127_8142290_2 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000001819 218.0
YHH3_k127_8142547_0 PFAM sigma-54 factor interaction domain-containing protein K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 505.0
YHH3_k127_8183733_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009627 396.0
YHH3_k127_8183733_1 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007844 331.0
YHH3_k127_8183733_2 MFP subunit - - - 0.000000000000000000002179 95.0
YHH3_k127_8228784_0 fatty acid beta-oxidation using acyl-CoA dehydrogenase K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 367.0
YHH3_k127_8228784_1 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 303.0
YHH3_k127_8228784_2 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.00000000000000000000000000000000000000001506 155.0
YHH3_k127_8235196_0 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000001453 216.0
YHH3_k127_8235196_1 exporter - - - 0.0000003332 62.0
YHH3_k127_8237684_0 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 497.0
YHH3_k127_8237684_1 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000005297 175.0
YHH3_k127_8237684_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000004164 147.0
YHH3_k127_8237684_3 - - - - 0.0000000000000000003826 90.0
YHH3_k127_8237684_4 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000001543 76.0
YHH3_k127_8237684_5 PFAM TonB-dependent Receptor Plug - - - 0.0000001733 59.0
YHH3_k127_8239862_0 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03466,K03657,K03684,K03724 - 3.1.13.5,3.6.4.12 0.000000000000000000000000000000000000000000000000002655 188.0
YHH3_k127_8239862_1 SNF2 family N-terminal domain - - - 0.00000000000000000000000002919 120.0
YHH3_k127_8239862_2 Thioesterase superfamily K07107 - - 0.000000000000000000000041 105.0
YHH3_k127_8239862_3 spore germination - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000002776 91.0
YHH3_k127_8252584_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 596.0
YHH3_k127_8252584_1 BNR repeat-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 448.0
YHH3_k127_8252584_2 Belongs to the glycosyl hydrolase 28 family K01184 - 3.2.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008012 299.0
YHH3_k127_8252584_3 Glycogen debranching enzyme K05989 - 3.2.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 300.0
YHH3_k127_8263952_0 AcrB/AcrD/AcrF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 485.0
YHH3_k127_8263952_1 HlyD family secretion protein - - - 0.0000000000000000000000003571 111.0
YHH3_k127_8266283_0 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 578.0
YHH3_k127_8266283_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 341.0
YHH3_k127_8266283_10 - - - - 0.00003086 51.0
YHH3_k127_8266283_2 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 319.0
YHH3_k127_8266283_3 3-beta hydroxysteroid dehydrogenase K22320 - 1.1.1.412 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 316.0
YHH3_k127_8266283_4 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003486 248.0
YHH3_k127_8266283_5 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000528 197.0
YHH3_k127_8266283_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005623,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.00000000000000000000000000000000000000000000000001915 184.0
YHH3_k127_8266283_7 Sigma-70, region 4 - - - 0.0000000000000000000002352 102.0
YHH3_k127_8266283_8 Thioesterase K07107,K18014 - 4.3.1.14 0.0000000000000000000003721 102.0
YHH3_k127_8281055_0 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004793 459.0
YHH3_k127_8281055_1 ImcF-related N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 355.0
YHH3_k127_8281055_2 Type VI secretion system protein DotU - - - 0.00000000000000000000000000000000000000006767 160.0
YHH3_k127_8281055_3 - - - - 0.00000000000001036 78.0
YHH3_k127_8339199_0 ubiE/COQ5 methyltransferase family K00574,K07755 - 2.1.1.137,2.1.1.79 0.00000000000000000000000000000000000000000000000000000000003144 209.0
YHH3_k127_8339199_1 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000001845 167.0
YHH3_k127_8348056_0 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009381 391.0
YHH3_k127_8348056_1 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 321.0
YHH3_k127_8348056_2 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000006944 106.0
YHH3_k127_8357067_0 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007455 538.0
YHH3_k127_8357067_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 467.0
YHH3_k127_8357067_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009361 459.0
YHH3_k127_8357067_3 TIGRFAM type IV-A pilus assembly ATPase PilB K02454,K02504,K02652 - - 0.0000000000000000000000000000000000000000000000000000001799 213.0
YHH3_k127_8357067_4 Glucuronate isomerase - - - 0.0000000000000000000000000000000000000000000000000000165 190.0
YHH3_k127_8357067_5 type II secretion system protein E K02652 - - 0.0000000000000000000000000000000000000000000000000007249 201.0
YHH3_k127_8357067_6 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000003214 49.0
YHH3_k127_837335_0 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003028 284.0
YHH3_k127_837335_1 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000569 222.0
YHH3_k127_837335_2 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0000005456 59.0
YHH3_k127_8384377_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 592.0
YHH3_k127_8384377_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000008663 192.0
YHH3_k127_8384377_2 Periplasmic binding protein domain K01999 - - 0.00008172 47.0
YHH3_k127_8406236_0 Bacterial regulatory proteins, lacI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 410.0
YHH3_k127_8406236_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 376.0
YHH3_k127_8406236_2 - - - - 0.00000000000000000000000000000000000000000000006374 179.0
YHH3_k127_8409276_0 Protein of unknown function (DUF3494) - - - 0.00000000000000000000529 111.0
YHH3_k127_8409276_1 guanyl-nucleotide exchange factor activity K14475,K20276 - - 0.0000000006489 74.0
YHH3_k127_8409276_2 Carboxypeptidase regulatory-like domain - - - 0.0000001572 66.0
YHH3_k127_8414222_0 transglutaminase-like - - - 1.543e-306 959.0
YHH3_k127_8414222_1 Domain of unknown function (DUF3516) - - - 0.0000000001064 64.0
YHH3_k127_8415123_0 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 7.449e-265 846.0
YHH3_k127_8416520_0 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 449.0
YHH3_k127_8416520_1 Nucleoside diphosphate kinase K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000004394 187.0
YHH3_k127_8416520_2 Response regulator receiver - - - 0.000000000000000000000000000000000005886 145.0
YHH3_k127_8436054_0 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 322.0
YHH3_k127_8436054_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000156 115.0
YHH3_k127_8436054_2 DinB family - - - 0.000000000000000000000000001447 118.0
YHH3_k127_8436054_3 Transport and Golgi organisation 2 - - - 0.0000000000000000000000004149 113.0
YHH3_k127_8452952_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 510.0
YHH3_k127_8452952_1 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 297.0
YHH3_k127_8452952_2 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000001802 127.0
YHH3_k127_8452952_3 Putative MetA-pathway of phenol degradation - - - 0.0000000408 59.0
YHH3_k127_8457374_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 556.0
YHH3_k127_8457374_1 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006116 291.0
YHH3_k127_8457374_2 general secretion pathway protein - - - 0.00000000000000000001278 98.0
YHH3_k127_8460434_0 Secretin and TonB N terminus short domain K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006542 509.0
YHH3_k127_8466029_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1057.0
YHH3_k127_8466029_1 amidase activity K03796 - - 0.00000000000000000000000000000000000000007011 154.0
YHH3_k127_8478335_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000417 391.0
YHH3_k127_8478335_1 Prephenate dehydrogenase K00220 - 1.3.1.12,1.3.1.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 301.0
YHH3_k127_8478335_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000004644 203.0
YHH3_k127_8478335_3 rRNA processing K09140 - - 0.00000000000000000000000008798 109.0
YHH3_k127_8495897_0 Carbohydrate esterase, sialic acid-specific acetylesterase K05970 - 3.1.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 312.0
YHH3_k127_8495897_1 COG3119 Arylsulfatase A and related enzymes - - - 0.000000000000000000000000000000000000000000000000000001423 198.0
YHH3_k127_8502858_0 Phosphoglycerate kinase K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 433.0
YHH3_k127_8502858_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 341.0
YHH3_k127_8502858_2 PFAM Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 304.0
YHH3_k127_8507289_0 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 310.0
YHH3_k127_8507289_1 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02004,K05685 - - 0.00000000000000000000000000000000000000000000000000000000000000001476 235.0
YHH3_k127_8531283_0 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005574 290.0
YHH3_k127_8531283_1 MOSC domain - - - 0.000000000000000000004952 94.0
YHH3_k127_8531283_2 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000639 48.0
YHH3_k127_8622977_0 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 507.0
YHH3_k127_8622977_1 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009235 250.0
YHH3_k127_8622977_2 - - - - 0.00000005622 57.0
YHH3_k127_8622977_3 Tetratricopeptide repeat protein K12600 GO:0000184,GO:0000288,GO:0000291,GO:0000785,GO:0000956,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0016441,GO:0016458,GO:0019222,GO:0019439,GO:0032991,GO:0034427,GO:0034641,GO:0034655,GO:0035327,GO:0040029,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043928,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0055087,GO:0060255,GO:0065007,GO:0070478,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.0000001415 59.0
YHH3_k127_8622977_4 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00002568 49.0
YHH3_k127_8685604_0 PFAM Glucuronate isomerase K01812 - 5.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 433.0
YHH3_k127_8685604_1 PFAM short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006869 370.0
YHH3_k127_8685604_2 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 332.0
YHH3_k127_8689894_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 6.275e-194 614.0
YHH3_k127_8689894_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 335.0
YHH3_k127_8689894_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 296.0
YHH3_k127_8689894_3 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 299.0
YHH3_k127_8689894_4 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001043 267.0
YHH3_k127_8689894_5 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000002282 233.0
YHH3_k127_8689894_6 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000000000000000001811 169.0
YHH3_k127_8689894_7 PFAM Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000000000000000001644 161.0
YHH3_k127_8689894_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000003317 92.0
YHH3_k127_869601_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004486 316.0
YHH3_k127_869601_1 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004843 256.0
YHH3_k127_869601_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000001846 226.0
YHH3_k127_869601_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000000000000000000000001721 151.0
YHH3_k127_869601_4 Ribosomal L27 protein K02899 - - 0.0000000000000000000000000000004274 123.0
YHH3_k127_869601_5 Regulatory protein, FmdB family - - - 0.000000000000000000002934 98.0
YHH3_k127_869601_6 Protein of unknown function (DUF1318) K09978 - - 0.000000000000000003832 90.0
YHH3_k127_869601_7 - - - - 0.0001568 48.0
YHH3_k127_875769_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 512.0
YHH3_k127_875769_1 Cys/Met metabolism PLP-dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 321.0
YHH3_k127_875769_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000468 201.0
YHH3_k127_8864919_0 Phosphate acetyl/butaryl transferase K00625,K13788 - 2.3.1.8 0.0 1055.0
YHH3_k127_8864919_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 587.0
YHH3_k127_8864919_2 Aminoacyl tRNA synthetase class II, N-terminal domain K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 476.0
YHH3_k127_8864919_3 Phenylalanyl-tRNA synthetase beta K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 467.0
YHH3_k127_8864919_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000000002837 152.0
YHH3_k127_8864919_5 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000002549 72.0
YHH3_k127_8873350_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 530.0
YHH3_k127_8873350_1 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000006892 216.0
YHH3_k127_8899841_0 Ammonium Transporter Family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 563.0
YHH3_k127_8899841_1 myo-inosose-2 dehydratase activity - - - 0.000000000000000000000000000000000000000000000000000000000000001935 222.0
YHH3_k127_8899841_2 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000000000000000000000000000003291 208.0
YHH3_k127_8899841_3 SET domain K07117 - - 0.00000000000000000000000000000002361 129.0
YHH3_k127_8904435_0 exporter - - - 0.00000000006206 75.0
YHH3_k127_8904435_1 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000001122 57.0
YHH3_k127_8946470_0 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000001092 191.0
YHH3_k127_8946470_1 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000007544 97.0
YHH3_k127_8946470_2 Biopolymer transport protein ExbD/TolR - - - 0.00000000000003105 79.0
YHH3_k127_8959374_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 490.0
YHH3_k127_8959374_1 metallopeptidase activity K01993,K13408,K16922 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 334.0
YHH3_k127_9017583_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 8.738e-203 642.0
YHH3_k127_9017583_1 MacB-like periplasmic core domain K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005098 270.0
YHH3_k127_9017583_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000000000000000000322 137.0
YHH3_k127_9017583_3 repeat protein - - - 0.0000006749 59.0
YHH3_k127_9030120_0 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000007836 188.0
YHH3_k127_9030120_1 Sigma-70 region 2 K03088 - - 0.00000005617 56.0
YHH3_k127_9095215_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007849 475.0
YHH3_k127_9095215_1 Endoribonuclease that initiates mRNA decay K18682 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 482.0
YHH3_k127_9095215_2 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 359.0
YHH3_k127_9116277_0 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 591.0
YHH3_k127_9116277_1 Phosphoenolpyruvate carboxylase K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 568.0
YHH3_k127_9116277_2 PFAM ATPase associated with various cellular activities AAA_3 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 396.0
YHH3_k127_9116277_3 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 392.0
YHH3_k127_9116277_4 Na+-dependent bicarbonate transporter superfamily K07086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 331.0
YHH3_k127_9116277_5 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000001766 216.0
YHH3_k127_9116277_6 TIGRFAM flavoprotein, HI0933 family K07007 - - 0.00000000000000000000000000000000000000009152 166.0
YHH3_k127_9116277_7 - - - - 0.0000000000000000000271 91.0
YHH3_k127_9116277_8 Belongs to the P(II) protein family - - - 0.0000000000000008637 82.0
YHH3_k127_913178_0 Parallel beta-helix repeats - - - 4.988e-217 690.0
YHH3_k127_913178_1 Belongs to the glycosyl hydrolase 2 family - - - 0.00000000000000000000000000000000000000000005771 178.0
YHH3_k127_913178_2 PFAM L-fucose isomerase, C-terminal domain - - - 0.0002646 46.0
YHH3_k127_9132385_0 Alpha-L-arabinofuranosidase C-terminus K01209 - 3.2.1.55 9.822e-310 962.0
YHH3_k127_9132385_1 Alkaline and neutral invertase - - - 3.933e-279 876.0
YHH3_k127_9132385_2 Sucrose synthase K13058 GO:0003674,GO:0003824,GO:0005975,GO:0005984,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0034637,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0046351,GO:0071704,GO:1901576 2.4.1.246 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 549.0
YHH3_k127_9132385_3 PfkB family K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000002 224.0
YHH3_k127_9132385_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000001606 187.0
YHH3_k127_9132385_5 Phosphoribosyl transferase domain K07101 - - 0.0000000000000000000002658 102.0
YHH3_k127_9132385_6 - - - - 0.00000000000000000003918 106.0
YHH3_k127_9132385_7 Methanol-cobalamin methyltransferase B subunit K04480 - 2.1.1.90 0.00000001672 60.0
YHH3_k127_9132385_8 alginic acid biosynthetic process K07004,K15125,K20276 - - 0.0000001223 65.0
YHH3_k127_9147826_0 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 388.0
YHH3_k127_9147826_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000003351 199.0
YHH3_k127_9147826_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000001019 79.0
YHH3_k127_9148449_0 Lacto-N-biose phosphorylase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000614 534.0
YHH3_k127_9148449_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003374 334.0
YHH3_k127_9148449_2 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000000000000193 198.0
YHH3_k127_922423_0 all-trans-retinol 13,14-reductase activity K09516,K09835 - 1.3.99.23,5.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000004203 252.0
YHH3_k127_922423_1 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000009544 141.0
YHH3_k127_922423_2 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.000198 53.0
YHH3_k127_9235776_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 563.0
YHH3_k127_9250545_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 580.0
YHH3_k127_9250545_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000761 139.0
YHH3_k127_9250758_0 Sulfate transporter antisigma-factor antagonist STAS K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 606.0
YHH3_k127_9250758_1 PFAM type II secretion system K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 500.0
YHH3_k127_9250758_10 queuosine salvage K09125 - - 0.000000000000000000000000000003315 127.0
YHH3_k127_9250758_11 tRNA synthetases class I (C) catalytic domain K01883 - 6.1.1.16 0.000000000000000000000000001979 114.0
YHH3_k127_9250758_12 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000008382 102.0
YHH3_k127_9250758_13 - - - - 0.0000000000000000000007656 96.0
YHH3_k127_9250758_14 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000001521 85.0
YHH3_k127_9250758_15 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000002488 66.0
YHH3_k127_9250758_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009033 410.0
YHH3_k127_9250758_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005908 395.0
YHH3_k127_9250758_4 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 334.0
YHH3_k127_9250758_5 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 323.0
YHH3_k127_9250758_6 of the alpha beta superfamily K06889 - - 0.000000000000000000000000000000000000000000000000000000001802 211.0
YHH3_k127_9250758_7 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000001494 183.0
YHH3_k127_9250758_8 guanine deglycation, methylglyoxal removal K03152 - 3.5.1.124 0.000000000000000000000000000000000000000000005278 169.0
YHH3_k127_9250758_9 PTS HPr component phosphorylation site K11189 - - 0.000000000000000000000000000001591 122.0
YHH3_k127_9270785_0 beta-glucuronidase activity K01195 - 3.2.1.31 8.328e-243 762.0
YHH3_k127_9270785_1 Uncharacterized protein conserved in bacteria (DUF2264) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008783 439.0
YHH3_k127_9270785_2 Pectate lyase superfamily protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005401 415.0
YHH3_k127_9270785_3 symporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 380.0
YHH3_k127_9277707_0 unsaturated chondroitin disaccharide hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007665 473.0
YHH3_k127_9277707_1 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate K01815 - 5.3.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008785 323.0
YHH3_k127_9277707_2 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000063 276.0
YHH3_k127_9279330_0 Belongs to the D-alanine--D-alanine ligase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 498.0
YHH3_k127_9279330_1 - - - - 0.0000000000000000000002499 102.0
YHH3_k127_9279330_2 acetyltransferase K03789 - 2.3.1.128 0.000000000000000000007437 98.0
YHH3_k127_9279330_3 Trehalose utilisation - - - 0.000000000005849 67.0
YHH3_k127_9279891_0 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 441.0
YHH3_k127_9279891_1 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006821 410.0
YHH3_k127_9279891_2 Protein of unknown function (DUF1365) K09701 - - 0.0000000000000000000000000000000000000000000000000000000000000009072 227.0
YHH3_k127_9279891_3 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000001812 158.0
YHH3_k127_9304058_0 PFAM GDSL-like Lipase Acylhydrolase - - - 0.000000000000000000000000000000000000000000002231 178.0
YHH3_k127_9304058_1 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000004082 151.0
YHH3_k127_9305172_0 3-beta hydroxysteroid dehydrogenase/isomerase family K08678 - 4.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000004088 259.0
YHH3_k127_9305172_1 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000398 239.0
YHH3_k127_9305172_2 acetolactate synthase large subunit K01652 - 2.2.1.6 0.0000000000000000000006199 99.0
YHH3_k127_9316772_0 arylsulfatase activity K01137,K01138 - 3.1.6.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 479.0
YHH3_k127_9316772_1 Glycosyl hydrolases family 16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 419.0
YHH3_k127_9316772_2 COGs COG5573 nucleic-acid-binding protein contains PIN domain - - - 0.0000000000000000000000000000000000008977 143.0
YHH3_k127_9316772_3 PIN domain - - - 0.00003851 51.0
YHH3_k127_9331004_0 Secretion system protein E K02454 - - 4.195e-209 668.0
YHH3_k127_9331004_1 Type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 437.0
YHH3_k127_9331004_2 secretion system K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 321.0
YHH3_k127_9331004_3 - - - - 0.00000000000000000005728 96.0
YHH3_k127_9331004_5 Pilus assembly protein - - - 0.000003116 54.0
YHH3_k127_9331004_6 Aldose 1-epimerase K01785 - 5.1.3.3 0.000006058 51.0
YHH3_k127_9336804_0 hydrogen-translocating pyrophosphatase activity K15987 - 3.6.1.1 5.721e-227 716.0
YHH3_k127_9358888_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 511.0
YHH3_k127_9358888_1 Predicted membrane protein (DUF2238) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 295.0
YHH3_k127_9361064_0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 461.0
YHH3_k127_9361064_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 431.0
YHH3_k127_9361064_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009966 293.0
YHH3_k127_9388041_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 9.692e-224 704.0
YHH3_k127_9388041_1 alginic acid biosynthetic process - - - 0.000000000000004719 79.0
YHH3_k127_9390165_0 translation initiation factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 326.0
YHH3_k127_9390165_1 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003869 286.0
YHH3_k127_9390165_2 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005747 271.0
YHH3_k127_9390165_3 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000002764 183.0
YHH3_k127_939384_0 COG2211 Na melibiose symporter and related transporters K03292 - - 4.271e-214 674.0
YHH3_k127_939384_1 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 413.0
YHH3_k127_939384_2 Methylpurine-DNA glycosylase (MPG) - - - 0.0000000000000000000000000000000000000000000000000005054 189.0
YHH3_k127_9405465_0 Glycosyl hydrolases family 2, TIM barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 365.0
YHH3_k127_9405465_1 TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 308.0
YHH3_k127_9405465_2 Periplasmic binding proteins and sugar binding domain of LacI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001344 240.0
YHH3_k127_9438684_0 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 331.0
YHH3_k127_9438684_1 PFAM oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 286.0
YHH3_k127_9444617_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1235.0
YHH3_k127_9444617_1 ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007183 406.0
YHH3_k127_9444617_2 Major facilitator Superfamily K16210 - - 0.0000000000000000000000000000000000000000000000000000000000000000000045 250.0
YHH3_k127_9444617_3 Nitrogen regulatory protein P-II - - - 0.00000000000000000000000000000000000000000000000000002448 189.0
YHH3_k127_9451883_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000144 266.0
YHH3_k127_9473615_0 Sodium:sulfate symporter transmembrane region - - - 1.197e-209 669.0
YHH3_k127_9473615_1 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0008693,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016860,GO:0016863,GO:0019171,GO:0019752,GO:0032787,GO:0034017,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0047451,GO:0071704,GO:0072330,GO:1901576 4.2.1.59,5.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000001843 263.0
YHH3_k127_9474413_0 Bacterial type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 516.0
YHH3_k127_9474413_1 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000000000003858 86.0
YHH3_k127_9481284_0 Isocitrate/isopropylmalate dehydrogenase K00030,K00031,K00052 - 1.1.1.41,1.1.1.42,1.1.1.85 3.739e-210 664.0
YHH3_k127_9481284_1 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 6.141e-208 658.0
YHH3_k127_9481284_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004901 366.0
YHH3_k127_9481284_3 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 346.0
YHH3_k127_9481284_4 PFAM extracellular solute-binding protein family 5 K15580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002542 263.0
YHH3_k127_9481284_5 inositol monophosphate 1-phosphatase activity K01092,K05602,K18649 - 3.1.3.15,3.1.3.25,3.1.3.93 0.00000000000000000000000000000000000000000000000000000000000000000000000007081 254.0
YHH3_k127_9485871_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 475.0
YHH3_k127_9485871_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000001094 163.0
YHH3_k127_9498742_0 SAICAR synthetase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 378.0
YHH3_k127_9498742_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 370.0
YHH3_k127_9498742_2 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000001408 162.0
YHH3_k127_9510307_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1013.0
YHH3_k127_9510307_1 Circularly permuted ATP-grasp type 2 - - - 1.41e-232 727.0
YHH3_k127_9510307_2 pyrimidine-nucleoside phosphorylase K00756 - 2.4.2.2 6.198e-231 720.0
YHH3_k127_9510307_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005186 512.0
YHH3_k127_9510307_4 Circularly permuted ATP-grasp type 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000358 504.0
YHH3_k127_9510307_5 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 383.0
YHH3_k127_9510307_6 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 317.0
YHH3_k127_9510307_7 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 306.0
YHH3_k127_9510307_8 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000005227 242.0
YHH3_k127_9510307_9 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000004521 204.0
YHH3_k127_9546317_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1047.0
YHH3_k127_9546317_1 Insulinase (Peptidase family M16) K07263 - - 2.639e-202 658.0
YHH3_k127_9546317_2 - - - - 0.00000000000000000000000000000000000000004076 155.0
YHH3_k127_9574961_0 Bacterial extracellular solute-binding proteins, family 5 Middle K13893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 578.0
YHH3_k127_9574961_1 transport system, permease component K13894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 511.0
YHH3_k127_9574961_2 Binding-protein-dependent transport system inner membrane component K13895 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008753 475.0
YHH3_k127_9574961_3 - - - - 0.000000000000000000000000000000000002568 146.0
YHH3_k127_9574961_4 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.000000000000000000000004146 106.0
YHH3_k127_9574961_5 - - - - 0.000000000000004398 85.0
YHH3_k127_9574961_6 Translation initiation factor SUI1 K03113 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0002190,GO:0002192,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0110017,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000003407 57.0
YHH3_k127_9595529_0 Glutamine synthetase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 554.0
YHH3_k127_9595529_1 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 389.0
YHH3_k127_9595529_10 FabA-like domain K02372 - 4.2.1.59 0.000000008114 61.0
YHH3_k127_9595529_2 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 326.0
YHH3_k127_9595529_3 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 321.0
YHH3_k127_9595529_4 PFAM Stage II sporulation E family protein K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 317.0
YHH3_k127_9595529_5 lipopolysaccharide core region biosynthetic process - - - 0.00000000000000000000000000000000000000000000003089 177.0
YHH3_k127_9595529_6 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000004462 169.0
YHH3_k127_9595529_7 oxidation-reduction process - - - 0.00000000000000000000000000000000000000000004667 173.0
YHH3_k127_9595529_8 AMP-binding enzyme - - - 0.0000000000000000000000001864 113.0
YHH3_k127_9595529_9 SNAP receptor activity - - - 0.0000000000003803 82.0
YHH3_k127_9624210_0 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000002382 143.0
YHH3_k127_9624210_1 - - - - 0.000000000000000000000000000002076 126.0
YHH3_k127_9624210_2 - - - - 0.0001132 55.0
YHH3_k127_9624210_3 DoxX-like family - - - 0.0001178 46.0
YHH3_k127_965486_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 531.0
YHH3_k127_965486_1 - - - - 0.0000000000000000000000000000000000000000000000000000002357 198.0
YHH3_k127_9683344_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 321.0
YHH3_k127_9701760_0 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 517.0
YHH3_k127_9701760_1 Glycoside hydrolase family 16 K01216 - 3.2.1.73 0.0000000000000000000004285 102.0
YHH3_k127_971439_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000001598 237.0
YHH3_k127_971439_1 Metallophosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000000000000002698 223.0
YHH3_k127_971439_2 DeoR C terminal sensor domain - - - 0.000000000000000000000000000000000000000000000000000000002992 203.0
YHH3_k127_971439_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000000008488 182.0
YHH3_k127_971439_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000102 128.0
YHH3_k127_9733363_0 Hydantoinase/oxoprolinase K01469,K01473 - 3.5.2.14,3.5.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000861 606.0
YHH3_k127_9737155_0 Disulphide bond corrector protein DsbC K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008749 383.0
YHH3_k127_9737155_1 TonB-dependent receptor plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002617 285.0
YHH3_k127_9737155_2 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000734 259.0
YHH3_k127_9737155_3 Redoxin - - - 0.0000000000000000000000001615 123.0
YHH3_k127_9737155_4 FecR protein K07165 - - 0.00000000000000005141 86.0
YHH3_k127_9748215_0 Predicted permease - - - 1.1e-205 647.0
YHH3_k127_9748215_1 arsenical-resistance protein K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 477.0
YHH3_k127_9748215_2 Low molecular weight phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000017 226.0
YHH3_k127_9748215_3 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000000000000000000000000005798 194.0
YHH3_k127_9748215_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000006608 144.0
YHH3_k127_9748215_5 Cytochrome C biogenesis protein - - - 0.0000000000000000000000000000000000001846 149.0
YHH3_k127_9748215_6 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000000163 128.0
YHH3_k127_9748215_7 Thioredoxin domain - - - 0.0000000000000000000000000003569 115.0
YHH3_k127_9748215_8 - - - - 0.00000000000000000000000003405 113.0
YHH3_k127_9748215_9 - - GO:0008150,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0065007 - 0.000000000000001327 79.0
YHH3_k127_9776300_0 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004486 429.0
YHH3_k127_9776300_1 Vault protein inter-alpha-trypsin domain K07114 - - 0.000000000000000000000000000001346 127.0
YHH3_k127_9776300_2 procollagen C-endopeptidase enhancer - GO:0003674,GO:0005488,GO:0005518,GO:0005539,GO:0008047,GO:0008150,GO:0008201,GO:0009893,GO:0009987,GO:0010033,GO:0010604,GO:0010952,GO:0016504,GO:0019222,GO:0030162,GO:0030234,GO:0031323,GO:0031325,GO:0032268,GO:0032270,GO:0034097,GO:0042221,GO:0043085,GO:0043167,GO:0043168,GO:0044093,GO:0044877,GO:0045862,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051716,GO:0052547,GO:0060255,GO:0061134,GO:0065007,GO:0065009,GO:0070887,GO:0071310,GO:0071345,GO:0080090,GO:0097367,GO:0098772,GO:1901681,GO:1990823,GO:1990830 - 0.00000000001454 72.0
YHH3_k127_9786467_0 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000001366 221.0
YHH3_k127_9801691_0 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 9.112e-248 770.0
YHH3_k127_9802822_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 526.0
YHH3_k127_9802822_1 Cytochrome c oxidase subunit K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 306.0
YHH3_k127_9802822_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000003826 239.0
YHH3_k127_9807328_0 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006559 438.0
YHH3_k127_9807328_1 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 305.0
YHH3_k127_9841302_0 PFAM CBS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005908 297.0
YHH3_k127_9841302_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000002378 193.0
YHH3_k127_9841302_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000006837 76.0
YHH3_k127_9861016_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1598.0
YHH3_k127_9861016_1 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000001469 156.0
YHH3_k127_9866754_0 Glycogen debranching enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 563.0
YHH3_k127_9866754_1 Pectate lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 426.0
YHH3_k127_9866754_2 Bacterial regulatory proteins, lacI family K02529 - - 0.00000000000000000000000000000000000000000000000000005784 201.0
YHH3_k127_9866754_3 Sodium:solute symporter family K03307 - - 0.0000000000000000000000000000000000000000000001894 178.0
YHH3_k127_9866754_4 cell wall binding repeat - - - 0.00000000000000000000000000000000000000001156 161.0
YHH3_k127_987397_0 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 377.0
YHH3_k127_987397_1 CAAX protease self-immunity - - - 0.0000000000000000000000003297 117.0
YHH3_k127_9886487_0 PFAM Xylose isomerase domain protein TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 312.0
YHH3_k127_9886487_1 Maf-like protein K06287 - - 0.000000000000000000000000000000000000007104 154.0
YHH3_k127_9886487_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.00000000000000000000000003826 109.0
YHH3_k127_9886487_3 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000002595 95.0
YHH3_k127_9903094_0 Pkd domain containing protein - - - 0.00001496 59.0
YHH3_k127_9906487_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 2.048e-249 773.0
YHH3_k127_9906487_1 Histidine ammonia-lyase K01745 - 4.3.1.3 2.717e-205 644.0
YHH3_k127_9906487_2 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 610.0
YHH3_k127_9921086_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 2.2e-322 997.0
YHH3_k127_9921086_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000876 272.0
YHH3_k127_9921086_2 Belongs to the carbohydrate kinase PfkB family K00882 - 2.7.1.56 0.000000000000000000000000000000000000000000002056 175.0
YHH3_k127_9922303_0 acetyl-CoA hydrolase - - - 2.102e-219 689.0
YHH3_k127_9922303_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 397.0
YHH3_k127_9922303_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000004898 111.0
YHH3_k127_9922765_0 Receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 430.0
YHH3_k127_9922765_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000009445 113.0
YHH3_k127_9958971_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007167 500.0
YHH3_k127_9958971_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 419.0
YHH3_k127_9958971_10 RNA polymerase activity K03060 - 2.7.7.6 0.0000000000000000000000003544 106.0
YHH3_k127_9958971_11 - - - - 0.00000001551 63.0
YHH3_k127_9958971_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 304.0
YHH3_k127_9958971_3 Peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001538 269.0
YHH3_k127_9958971_4 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000000006579 217.0
YHH3_k127_9958971_5 - - - - 0.00000000000000000000000000000000000000000000000000000000001237 217.0
YHH3_k127_9958971_6 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000006336 194.0
YHH3_k127_9958971_7 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000008302 183.0
YHH3_k127_9958971_8 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000009636 169.0
YHH3_k127_9958971_9 Tetratricopeptide repeat - - - 0.00000000000000000000000000005428 127.0
YHH3_k127_9959555_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 505.0
YHH3_k127_9959555_1 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003812 295.0
YHH3_k127_9959555_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000002308 263.0
YHH3_k127_9959555_3 L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000002418 193.0
YHH3_k127_9959555_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000007051 153.0
YHH3_k127_9959555_5 ACT domain K09707 - - 0.000000000000000000000000000000267 126.0
YHH3_k127_9959555_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000009679 115.0