YHH3_k127_10035089_0
Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
K02111
-
3.6.3.14
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576
308.0
View
YHH3_k127_10035089_1
Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
K02112
GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045261,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902600
3.6.3.14
0.00000000000000000000000000000000000000000000000000000000000000000000000008573
258.0
View
YHH3_k127_10035089_2
Hep Hag repeat protein
-
-
-
0.000001551
57.0
View
YHH3_k127_10035089_3
Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
K02115
-
-
0.00007672
54.0
View
YHH3_k127_10056926_0
Belongs to the 'phage' integrase family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000001939
235.0
View
YHH3_k127_10056926_1
Protein of unknown function (DUF3426)
-
-
-
0.000000000000000000001443
96.0
View
YHH3_k127_10606679_0
Beta propeller domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006057
334.0
View
YHH3_k127_10606679_1
histidyl-tRNA synthetase
K01892
-
6.1.1.21
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616
308.0
View
YHH3_k127_10606679_2
PFAM RNP-1 like RNA-binding protein
-
-
-
0.000000000000000000000005144
104.0
View
YHH3_k127_10702171_0
ATPase, P-type (transporting), HAD superfamily, subfamily IC
K17686
GO:0000041,GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0008150,GO:0015677,GO:0016020,GO:0030001,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0051179,GO:0051234,GO:0071944
3.6.3.54
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257
580.0
View
YHH3_k127_10702171_1
Biogenesis protein
K02275,K09792,K17686
-
1.9.3.1,3.6.3.54
0.000000000000000000000000000000000000000000000000000000000000000778
237.0
View
YHH3_k127_10702171_2
Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
K03734
-
2.7.1.180
0.00000000000000000000000007108
119.0
View
YHH3_k127_10702171_3
Metal-sensitive transcriptional repressor
K21600
-
-
0.0000000003247
64.0
View
YHH3_k127_10702171_4
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
-
-
-
0.000000004928
67.0
View
YHH3_k127_10702171_5
Vitamin K epoxide reductase
-
-
-
0.000008922
53.0
View
YHH3_k127_10702171_6
Ferric reductase like transmembrane component
-
-
-
0.00002923
55.0
View
YHH3_k127_10934619_0
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000001182
241.0
View
YHH3_k127_10934619_1
PFAM glycosidase PH1107-related
K20885
-
2.4.1.339,2.4.1.340
0.0000000000000000000000000000000000000000000000000000000000000000008707
251.0
View
YHH3_k127_10934619_2
PFAM glycosidase, PH1107-related
K20885
-
2.4.1.339,2.4.1.340
0.00000000000000000000000000000000000000000000000000000000000003933
228.0
View
YHH3_k127_10934619_3
beta-1,4-mannooligosaccharide phosphorylase
-
-
-
0.000000000000000000000000000000000000659
159.0
View
YHH3_k127_10934619_4
Bacterial phospho-glucose isomerase C-terminal SIS domain
K15916
-
5.3.1.8,5.3.1.9
0.00000000000000000000000000000000001977
148.0
View
YHH3_k127_10934619_5
VTC domain
-
-
-
0.000000000000000000000000667
112.0
View
YHH3_k127_10934619_6
-
K09712,K14475
-
-
0.0000000000006444
76.0
View
YHH3_k127_10934619_7
Cof-like hydrolase
-
-
-
0.0000005412
60.0
View
YHH3_k127_11183783_0
Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
K00820
-
2.6.1.16
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384
407.0
View
YHH3_k127_11183783_1
Methyltransferase FkbM domain
-
-
-
0.00000000000000000000000000000008241
136.0
View
YHH3_k127_11320005_0
Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
K01874
GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.10
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217
346.0
View
YHH3_k127_11320005_1
hydrolase, TatD family
K03424
-
-
0.000000000000000000000000000000000000000000000000000001473
200.0
View
YHH3_k127_11320005_2
transferase activity, transferring glycosyl groups
-
-
-
0.0000000000000000000000000000000000000000008557
175.0
View
YHH3_k127_11320005_3
Glycosyl transferase family 4
K02851
-
2.7.8.33,2.7.8.35
0.00000000009898
74.0
View
YHH3_k127_11443878_0
PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
K01802,K03768
-
5.2.1.8
0.00000000000000000000000000000000000000000000000002853
188.0
View
YHH3_k127_11443878_1
Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
K02528
GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360
2.1.1.182
0.00000000000000000000000000000000000004309
154.0
View
YHH3_k127_11443878_2
G5 domain protein
-
-
-
0.00000000000000000000001214
106.0
View
YHH3_k127_11443878_3
FemAB family
-
-
-
0.0000000000000000000116
103.0
View
YHH3_k127_11443878_4
RecB family exonuclease
K07465
-
-
0.0000000000009558
73.0
View
YHH3_k127_11443878_5
Acetyltransferase (GNAT) domain
-
-
-
0.0002144
53.0
View
YHH3_k127_11657456_0
Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
K02433
-
6.3.5.6,6.3.5.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192
440.0
View
YHH3_k127_11657456_1
Belongs to the peptidase M48B family
K03799
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009931
288.0
View
YHH3_k127_11657456_2
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
K02435
-
6.3.5.6,6.3.5.7
0.000000008757
61.0
View
YHH3_k127_11844692_0
Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
K03086
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527
399.0
View
YHH3_k127_11844692_1
beta-glucosidase activity
K05350
-
3.2.1.21
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579
333.0
View
YHH3_k127_11844692_10
heme binding
-
-
-
0.00000000000000000000000000005574
121.0
View
YHH3_k127_11844692_11
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
K04771
-
3.4.21.107
0.0000000000000000000008101
109.0
View
YHH3_k127_11844692_12
PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.000000000000000000002043
95.0
View
YHH3_k127_11844692_13
Belongs to the peptidase S41A family
K03797
-
3.4.21.102
0.000000000000003056
89.0
View
YHH3_k127_11844692_14
Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
K03282
GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066
-
0.0000000000001806
74.0
View
YHH3_k127_11844692_15
oligosaccharyl transferase activity
-
-
-
0.0000000000005844
81.0
View
YHH3_k127_11844692_16
Dolichyl-phosphate-mannose-protein mannosyltransferase
-
-
-
0.0000000005357
72.0
View
YHH3_k127_11844692_2
RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
K02316
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007599
330.0
View
YHH3_k127_11844692_3
PFAM phosphoglucose isomerase (PGI)
K01810
GO:0003674,GO:0003824,GO:0004347,GO:0016853,GO:0016860,GO:0016861
5.3.1.9
0.00000000000000000000000000000000000000000000000000000000000002033
231.0
View
YHH3_k127_11844692_4
Predicted membrane protein (DUF2177)
-
-
-
0.0000000000000000000000000000000000000001481
156.0
View
YHH3_k127_11844692_5
Mannose-6-phosphate isomerase
K00971
-
2.7.7.13
0.0000000000000000000000000000000000000009425
162.0
View
YHH3_k127_11844692_6
Aminoacyl-tRNA editing domain
-
-
-
0.000000000000000000000000000000000000002228
152.0
View
YHH3_k127_11844692_8
MgtC family
-
-
-
0.0000000000000000000000000000000000001805
157.0
View
YHH3_k127_11844692_9
Ribosomal RNA methyltransferase (FmrO)
K18845
-
2.1.1.179
0.0000000000000000000000000000005988
132.0
View
YHH3_k127_11881246_0
Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
K00962
-
2.7.7.8
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006486
576.0
View
YHH3_k127_11881246_1
DNA segregation ATPase FtsK SpoIIIE
K03466
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101
453.0
View
YHH3_k127_11881246_2
An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
K12574
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225
426.0
View
YHH3_k127_11881246_3
One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
K02519
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006888
384.0
View
YHH3_k127_11881246_4
Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
K02836
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751
307.0
View
YHH3_k127_11881246_5
ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
K01338
-
3.4.21.53
0.000000000000000000000000000000000000000000000000000000000000000000000000000000001524
284.0
View
YHH3_k127_11881246_6
UreE urease accessory protein, C-terminal domain
K21929
-
3.2.2.27
0.00000000000000000000000000000000000000000000000003128
186.0
View
YHH3_k127_11881246_7
Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
K03695,K03696
-
-
0.0000000000000000000000000000000000000002121
155.0
View
YHH3_k127_11881246_8
Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
K02956
-
-
0.0000000000000000000000005558
106.0
View
YHH3_k127_11881246_9
Domain of unknown function (DUF4115)
-
-
-
0.0000001487
61.0
View
YHH3_k127_12124647_0
The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
K03076
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008167
354.0
View
YHH3_k127_12124647_1
This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
K02933
GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000000000000001371
202.0
View
YHH3_k127_12124647_2
This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
K02931
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000000000000000000000000706
180.0
View
YHH3_k127_12124647_3
Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
K02988
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000003898
154.0
View
YHH3_k127_12124647_4
Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
K00939
-
2.7.4.3
0.000000000000000000000000000000009235
135.0
View
YHH3_k127_12124647_5
This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
K02881
GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904
-
0.000000000000000000000000000006668
122.0
View
YHH3_k127_12124647_6
One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
K02895
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000004053
119.0
View
YHH3_k127_12124647_7
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
K02994
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.00000000000000000000002146
104.0
View
YHH3_k127_12124647_8
binds to the 23S rRNA
K02876
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.000000000000000000004009
98.0
View
YHH3_k127_12124647_9
Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
K02954
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000004065
87.0
View
YHH3_k127_1213192_0
DNA polymerase X family
K02347
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199
435.0
View
YHH3_k127_1213192_1
MobA-like NTP transferase domain
K00963
-
2.7.7.9
0.000000000000000000000000000000000000000000001968
170.0
View
YHH3_k127_1213192_2
PFAM LemA
-
-
-
0.000000000000000000000000000000000001575
141.0
View
YHH3_k127_1213192_3
LysM domain
-
-
-
0.00000001095
63.0
View
YHH3_k127_1234303_0
Tyrosine recombinase XerD
K04763
-
-
0.00000000000000000000000000000000000000000000000001145
192.0
View
YHH3_k127_1234303_1
transcriptional regulatory protein
-
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
-
0.0000000000000000000000000000000000000000000001966
175.0
View
YHH3_k127_1234303_2
Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
K01159
-
3.1.22.4
0.000000000000000000000000000000000000000005464
159.0
View
YHH3_k127_1234303_3
TPR repeat
-
-
-
0.00009374
51.0
View
YHH3_k127_12516018_0
ATPase (AAA
K07478
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747
377.0
View
YHH3_k127_12658855_0
dna ligase
K10747
GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360,GO:1901576
6.5.1.1,6.5.1.6,6.5.1.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399
424.0
View
YHH3_k127_12658855_1
Transketolase, pyrimidine binding domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915
339.0
View
YHH3_k127_12658855_2
Transketolase
K00615
-
2.2.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921
301.0
View
YHH3_k127_12658855_3
Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
K13292
-
-
0.000000000000000000000000000000000000000000000007693
181.0
View
YHH3_k127_12658855_4
Ribose 5-phosphate isomerase
K01808
GO:0003674,GO:0003824,GO:0004751,GO:0005575,GO:0005576,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564
5.3.1.6
0.0000000000000000000000000005881
118.0
View
YHH3_k127_12658855_5
Belongs to the ribulose-phosphate 3-epimerase family
K01783
GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575
5.1.3.1
0.00000000000000000003978
98.0
View
YHH3_k127_12658855_6
Belongs to the LOG family
K06966
-
3.2.2.10
0.00000000000000002784
89.0
View
YHH3_k127_12658855_7
membrane
-
-
-
0.00000000000000003384
85.0
View
YHH3_k127_12799254_0
UbiA prenyltransferase family
-
-
-
0.0000000000000000000000000000000000000000000000000000007968
203.0
View
YHH3_k127_12799254_2
-O-antigen
K18814
-
-
0.00000006147
61.0
View
YHH3_k127_12871325_0
PFAM UvrB UvrC protein AAA ATPase, central region Clp, N terminal ATPase associated with various cellular activities, AAA_5 ATPase AAA-2
K03696
-
-
1.384e-227
724.0
View
YHH3_k127_12871325_1
Radical_SAM C-terminal domain
K07739
-
2.3.1.48
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003853
344.0
View
YHH3_k127_12871325_2
This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
K02884
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.00000000000000000000000000000008615
130.0
View
YHH3_k127_12871325_3
methyltransferase
-
-
-
0.00000000000000000000000000003741
125.0
View
YHH3_k127_12871325_4
DNA polymerase
K02335
-
2.7.7.7
0.000000000000005292
79.0
View
YHH3_k127_1289198_0
This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
K02358
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554
609.0
View
YHH3_k127_1289198_1
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
K02355
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303
325.0
View
YHH3_k127_1289198_10
The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
K02890
-
-
0.000000000000000007418
89.0
View
YHH3_k127_1289198_11
One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
K02961
-
-
0.000000000003701
69.0
View
YHH3_k127_1289198_12
One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
K02892
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000003458
67.0
View
YHH3_k127_1289198_13
structural constituent of ribosome
K02904
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.0006973
45.0
View
YHH3_k127_1289198_2
One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
K02886
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005188
292.0
View
YHH3_k127_1289198_3
Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
K02982
-
-
0.00000000000000000000000000000000000000000000000000000000000006212
219.0
View
YHH3_k127_1289198_4
Forms part of the polypeptide exit tunnel
K02926
-
-
0.00000000000000000000000000000000000000000000000001333
186.0
View
YHH3_k127_1289198_5
Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
K02878
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904
-
0.0000000000000000000000000000000000000000000000003327
179.0
View
YHH3_k127_1289198_6
Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
K02874
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904
-
0.0000000000000000000000000000000000007308
142.0
View
YHH3_k127_1289198_7
Involved in the binding of tRNA to the ribosomes
K02946
-
-
0.0000000000000000000000000000000000009892
141.0
View
YHH3_k127_1289198_8
Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
K02965
-
-
0.00000000000000000000000000000002518
127.0
View
YHH3_k127_1289198_9
One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
K02906
-
-
0.0000000000000000000000001401
111.0
View
YHH3_k127_1576479_0
UvrD/REP helicase N-terminal domain
K03657,K07465
-
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442
618.0
View
YHH3_k127_1576479_1
Zinc-binding dehydrogenase
-
-
-
0.0000299
48.0
View
YHH3_k127_1932950_0
Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
K03655
-
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499
317.0
View
YHH3_k127_1932950_1
Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
K01866
GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564
6.1.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944
305.0
View
YHH3_k127_1932950_2
Penicillin-binding protein
K05366
GO:0005575,GO:0005576
2.4.1.129,3.4.16.4
0.000000000000000000000000000000000000000000000736
178.0
View
YHH3_k127_232812_0
L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp
K01876
-
6.1.1.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102
374.0
View
YHH3_k127_232812_1
Belongs to the peptidase S11 family
K07258
-
3.4.16.4
0.000000000000000000000000000000000000003424
160.0
View
YHH3_k127_2376733_0
pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
K15987
-
3.6.1.1
4.746e-280
878.0
View
YHH3_k127_2376733_1
Belongs to the 5'-nucleotidase family
-
-
-
3.293e-211
666.0
View
YHH3_k127_2376733_10
Domain of Unknown Function with PDB structure (DUF3850)
-
-
-
0.00000000002762
68.0
View
YHH3_k127_2376733_2
succinylglutamate desuccinylase aspartoacylase
-
-
-
0.000000000000000000000000000000000000000000000000001554
195.0
View
YHH3_k127_2376733_3
NUDIX domain
-
-
-
0.00000000000000000000000000000000000000000000000123
181.0
View
YHH3_k127_2376733_4
Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant
K03465
-
2.1.1.148
0.0000000000000000000000000000000000000001171
162.0
View
YHH3_k127_2376733_5
peptidase activity
-
-
-
0.00000000000000000000000000001505
121.0
View
YHH3_k127_2376733_6
peptidase U32
-
-
-
0.000000000000002624
81.0
View
YHH3_k127_2376733_7
-
K00960
-
2.7.7.6
0.00000000000007882
76.0
View
YHH3_k127_2376733_8
PFAM Hemerythrin HHE cation binding domain
K07216
-
-
0.0000000000003792
75.0
View
YHH3_k127_2376733_9
Protein of unknown function (DUF3307)
-
-
-
0.000000000001043
72.0
View
YHH3_k127_2399396_0
Belongs to the RNA methyltransferase TrmD family
K00554
-
2.1.1.228
0.000000000000000000000000000000000000000000000000000000000009265
214.0
View
YHH3_k127_2399396_1
Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
K03685
GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363
3.1.26.3
0.000000000000000000000000000000000000000000000000000176
193.0
View
YHH3_k127_2399396_2
Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
K03625
-
-
0.000000000000000000004341
95.0
View
YHH3_k127_2399396_3
Belongs to the UPF0109 family
K06960
-
-
0.0000000000003462
72.0
View
YHH3_k127_2399396_4
Belongs to the bacterial ribosomal protein bS16 family
K02959
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000001316
64.0
View
YHH3_k127_2399396_5
Carrier of the growing fatty acid chain in fatty acid biosynthesis
K02078
-
-
0.00000002837
57.0
View
YHH3_k127_2399396_6
Pilus assembly protein, PilO
K02664
-
-
0.00001111
56.0
View
YHH3_k127_253440_0
Belongs to the MEMO1 family
K06990
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000001049
286.0
View
YHH3_k127_253440_1
type II secretion system protein
K02243,K02652
-
-
0.00000000000000000000000000000000000000000000000000000000000004346
220.0
View
YHH3_k127_253440_2
AraC-like ligand binding domain
-
-
-
0.000000000000000000000000000000000001375
141.0
View
YHH3_k127_253440_3
Tetratricopeptide repeat
-
-
-
0.0002295
48.0
View
YHH3_k127_2942088_0
Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
K01889
GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494
6.1.1.20
0.0000000000000000000000000000000000000000000000000000000000000000000000001081
253.0
View
YHH3_k127_2942088_1
phenylalanyl-tRNA synthetase (beta subunit)
K01890
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
6.1.1.20
0.00000000000000000000000000000000000000000000000000000000000000000236
250.0
View
YHH3_k127_3017002_0
helicase activity
-
-
-
0.00000000000000000000000000000002076
144.0
View
YHH3_k127_3017002_1
TIGRFAM cell envelope-related function transcriptional attenuator
-
-
-
0.0008496
48.0
View
YHH3_k127_3026715_0
COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component
K09014
-
-
4.51e-211
665.0
View
YHH3_k127_3026715_1
Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
K11717
-
2.8.1.7,4.4.1.16
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113
427.0
View
YHH3_k127_3026715_2
PFAM aminoacyl-tRNA synthetase class Ib
K01867
-
6.1.1.2
0.00000000000000000000000000000001172
131.0
View
YHH3_k127_3026715_3
SUF system FeS assembly protein
K04488
-
-
0.0000000000000000000000000001221
119.0
View
YHH3_k127_3026715_4
iron-sulfur cluster assembly
K07033,K09015
GO:0006790,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0050896,GO:0051186,GO:0071840
-
0.0000000000000000000000000225
116.0
View
YHH3_k127_3026715_5
Tyrosine recombinase XerC
K04763
-
-
0.0000000000000000000006037
106.0
View
YHH3_k127_3026715_6
cluster protein-associated redox disulfide domain
-
-
-
0.00000000001151
67.0
View
YHH3_k127_3026715_7
PFAM Septum formation initiator
-
-
-
0.0003288
48.0
View
YHH3_k127_3189696_0
-
-
-
-
0.000000000000000000000000000001841
129.0
View
YHH3_k127_326335_0
short-chain dehydrogenase reductase SDR
K12454
-
5.1.3.10
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005099
370.0
View
YHH3_k127_326335_1
Glycosyltransferase Family 4
K01953
-
6.3.5.4
0.000000000009782
77.0
View
YHH3_k127_326335_2
PFAM major facilitator superfamily MFS_1
-
-
-
0.000002408
53.0
View
YHH3_k127_326335_3
transferase activity, transferring glycosyl groups
-
-
-
0.0005664
51.0
View
YHH3_k127_3301969_0
tRNA synthetases class I (W and Y)
K01867
-
6.1.1.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246
346.0
View
YHH3_k127_3301969_1
Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
K03798
-
-
0.0000000000000000000000000000000000000234
153.0
View
YHH3_k127_3329196_0
MreB/Mbl protein
K04043
-
-
1.865e-249
785.0
View
YHH3_k127_3329196_1
Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
K03596
-
-
1.458e-198
635.0
View
YHH3_k127_3329196_10
Aldehyde ferredoxin oxidoreductase, N-terminal domain
K03738
-
1.2.7.5
0.00000000000000000616
94.0
View
YHH3_k127_3329196_11
Baseplate J-like protein
-
-
-
0.0000000000001238
84.0
View
YHH3_k127_3329196_12
Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
K07447
-
-
0.00000000001685
70.0
View
YHH3_k127_3329196_13
Sortase family
K07284
-
3.4.22.70
0.0000000006707
69.0
View
YHH3_k127_3329196_14
YtxH-like protein
-
-
-
0.0000007504
55.0
View
YHH3_k127_3329196_15
DNA polymerase III, delta subunit
K02340
-
2.7.7.7
0.000005904
56.0
View
YHH3_k127_3329196_16
Binds directly to 16S ribosomal RNA
K02968
-
-
0.0003889
48.0
View
YHH3_k127_3329196_2
helicase activity
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000989
322.0
View
YHH3_k127_3329196_3
Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
K03980
-
-
0.00000000000000000000000000000000000000000000000000000000000000002378
244.0
View
YHH3_k127_3329196_4
Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
K00939
GO:0003674,GO:0003824,GO:0004017,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576
2.7.4.3
0.00000000000000000000000000000000000000000000000000000000000000004577
229.0
View
YHH3_k127_3329196_5
TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family
-
-
-
0.0000000000000000000000000000000005927
144.0
View
YHH3_k127_3329196_6
Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
K03705
-
-
0.00000000000000000000000000002171
126.0
View
YHH3_k127_3329196_7
cell division
-
-
-
0.000000000000000000000000005705
124.0
View
YHH3_k127_3329196_8
Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
K01803
-
5.3.1.1
0.0000000000000000000001279
106.0
View
YHH3_k127_3329196_9
Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
K03687
-
-
0.00000000000000000004817
96.0
View
YHH3_k127_3355329_0
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03043
GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234
2.7.7.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343
403.0
View
YHH3_k127_3355329_1
Belongs to the peptidase S26 family
K03100
-
3.4.21.89
0.000000000000000000000000000000871
128.0
View
YHH3_k127_3355329_2
NOL1 NOP2 sun family protein
-
-
-
0.0000000000000000000000000002108
118.0
View
YHH3_k127_3355329_3
Domain of unknown function (DUF1736)
-
-
-
0.00000000000002251
86.0
View
YHH3_k127_3394744_0
TIGRFAM exonuclease, DNA polymerase III, epsilon subunit family
K02342
-
2.7.7.7
0.0000000000000000000000000000000000005001
148.0
View
YHH3_k127_3394744_1
Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
K01975
GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531
3.1.4.58
0.000001425
57.0
View
YHH3_k127_3439042_0
Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
K01872
-
6.1.1.7
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528
468.0
View
YHH3_k127_3439042_1
Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
K04078
GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0019899,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0035375,GO:0035966,GO:0040007,GO:0042221,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046872,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065007,GO:0071944,GO:0080090,GO:1903506,GO:2000112,GO:2001141
-
0.000000000000000000000003774
103.0
View
YHH3_k127_3439042_2
methylated DNA-protein cysteine methyltransferase
K07443
GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0005515,GO:0019899,GO:0097159,GO:1901363
-
0.00000000000000001768
88.0
View
YHH3_k127_3439042_3
O-antigen
-
-
-
0.00003138
53.0
View
YHH3_k127_3439042_4
cell adhesion involved in biofilm formation
-
-
-
0.0001512
54.0
View
YHH3_k127_3636495_0
PFAM NAD dependent epimerase dehydratase family
K01710,K08678
-
4.1.1.35,4.2.1.46
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667
454.0
View
YHH3_k127_3636495_1
Male sterility protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311
336.0
View
YHH3_k127_3636495_10
COG1214 Inactive homolog of metal-dependent proteases
K01409,K14742
GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360
2.3.1.234
0.0004646
47.0
View
YHH3_k127_3636495_2
PFAM glutaredoxin
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127
338.0
View
YHH3_k127_3636495_3
Glucose / Sorbosone dehydrogenase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000958
283.0
View
YHH3_k127_3636495_4
Alternative locus ID
K00721
-
2.4.1.83
0.0000000000000000000000000000000000000000000000000000000001703
214.0
View
YHH3_k127_3636495_5
Polyprenyl synthetase
K02523,K13787
GO:0003674,GO:0003824,GO:0004659,GO:0016740,GO:0016765
2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90
0.000000000000000000000000000000000000000000000000000008645
203.0
View
YHH3_k127_3636495_6
Threonylcarbamoyl adenosine biosynthesis protein TsaE
K06925
GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360
-
0.000000000000000000000001426
108.0
View
YHH3_k127_3636495_7
VanZ like family
-
-
-
0.0000003245
57.0
View
YHH3_k127_3636495_8
belongs to the thioredoxin family
K03671
-
-
0.00003292
49.0
View
YHH3_k127_3636495_9
Phosphoglycerate mutase
K01834
-
5.4.2.11
0.0001067
52.0
View
YHH3_k127_3673164_0
SpoU rRNA Methylase family
K03437
-
-
0.00000000000000000000000000000000000000000000000005411
186.0
View
YHH3_k127_3673164_1
Putative esterase
K03932
-
-
0.000000000000000000000000000000000001519
149.0
View
YHH3_k127_3673164_2
Phosphodiester glycosidase
-
-
-
0.000000002915
69.0
View
YHH3_k127_3688685_0
PFAM UvrD REP helicase
K03657
-
3.6.4.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004092
572.0
View
YHH3_k127_3688685_1
membrane
K08972
-
-
0.000000000000000000218
95.0
View
YHH3_k127_3688685_2
Thioredoxin
-
-
-
0.00000000009533
63.0
View
YHH3_k127_3688685_3
protein conserved in bacteria
-
-
-
0.0000004838
58.0
View
YHH3_k127_3741275_0
Belongs to the peptidase M16 family
-
-
-
0.0000000000000000000000000241
118.0
View
YHH3_k127_3798107_0
Belongs to the UDP-glucose GDP-mannose dehydrogenase family
K00012
-
1.1.1.22
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131
468.0
View
YHH3_k127_3798107_1
GtrA-like protein
K00721
-
2.4.1.83
0.000000000000000000000000000000000000000000000000000000000000000001694
240.0
View
YHH3_k127_3798107_2
Glycosyl transferase family 2
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000009047
232.0
View
YHH3_k127_3798107_3
Glycosyl transferase, group 1
-
-
-
0.000000000000000000000000000000000000001166
162.0
View
YHH3_k127_3798107_4
glycogen (starch) synthase activity
K00703,K00754
-
2.4.1.21
0.0000000000000000000000000000000000264
149.0
View
YHH3_k127_3798107_5
Cysteine-rich secretory protein family
-
-
-
0.0000000000000000000003443
107.0
View
YHH3_k127_3798107_6
Glycosyltransferase, group 1 family protein
-
-
-
0.00000000000000000000113
108.0
View
YHH3_k127_3804239_0
PhoQ Sensor
-
-
-
0.00000000000000000000000000000000000000007103
166.0
View
YHH3_k127_3804239_1
Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
K02654
-
3.4.23.43
0.00000000000000000000000000000000001602
146.0
View
YHH3_k127_3804239_2
Psort location Cytoplasmic, score
K18344
-
-
0.0000000000000000006669
91.0
View
YHH3_k127_3804239_3
Type II secretion system (T2SS), protein F
K02653
-
-
0.000000005303
58.0
View
YHH3_k127_3804239_4
Prokaryotic N-terminal methylation motif
K02650
-
-
0.0007057
48.0
View
YHH3_k127_3845384_0
impB/mucB/samB family C-terminal domain
K02346
-
2.7.7.7
0.00000000000000000000000000000000000000000000000000000003338
212.0
View
YHH3_k127_3845384_1
Metallopeptidase family M24
K01265
-
3.4.11.18
0.00000000000000000000000000000000000000000002014
169.0
View
YHH3_k127_3845384_2
Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
K01265
-
3.4.11.18
0.00001591
47.0
View
YHH3_k127_3845384_3
Protein of unknown function (DUF541)
K09807
-
-
0.00004097
53.0
View
YHH3_k127_3878162_0
Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
K00525
-
1.17.4.1
3.633e-234
741.0
View
YHH3_k127_3878162_1
amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
K01870
-
6.1.1.5
1.35e-220
716.0
View
YHH3_k127_3878162_10
COG0330 Membrane protease subunits stomatin prohibitin homologs
-
-
-
0.000000001453
69.0
View
YHH3_k127_3878162_2
Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
K00525
-
1.17.4.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958
519.0
View
YHH3_k127_3878162_3
Peptidoglycan polymerase that is essential for cell wall elongation
K05837
-
-
0.000000000000000000000000000000000000000000000000000000000000000001464
240.0
View
YHH3_k127_3878162_4
PFAM Cobalamin adenosyltransferase
K00798
-
2.5.1.17
0.0000000000000000000000000000000009851
138.0
View
YHH3_k127_3878162_5
Belongs to the peptidase S26 family
K03100
-
3.4.21.89
0.0000000000000000000000003452
111.0
View
YHH3_k127_3878162_6
RNHCP domain
-
-
-
0.000000000000000000000009275
103.0
View
YHH3_k127_3878162_7
Belongs to the bacterial ribosomal protein bL27 family
K02899
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.000000000000000000001156
96.0
View
YHH3_k127_3878162_8
Peptidase, M23
K21471
-
-
0.000000000000000001459
99.0
View
YHH3_k127_3878162_9
This protein binds to 23S rRNA in the presence of protein L20
K02888
-
-
0.0000000000001477
76.0
View
YHH3_k127_3891813_0
RmuC family
K09760
-
-
0.000000000000000000000000000000000000000003397
168.0
View
YHH3_k127_3891813_1
Belongs to the class-I aminoacyl-tRNA synthetase family
K01874
-
6.1.1.10
0.000000002655
60.0
View
YHH3_k127_4163889_0
PFAM Glycosyl transferase family 2
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000003997
238.0
View
YHH3_k127_4163889_1
membrane
-
-
-
0.000000000000000000006903
108.0
View
YHH3_k127_4163889_2
Polysaccharide biosynthesis protein
-
-
-
0.0000003771
63.0
View
YHH3_k127_4164542_0
Fn3 associated
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000005305
248.0
View
YHH3_k127_4164542_1
pathogenesis
-
-
-
0.000000000000000000000000000002216
128.0
View
YHH3_k127_4164542_2
Sodium/calcium exchanger protein
K07301
-
-
0.0000000000000000007658
98.0
View
YHH3_k127_4164542_3
YGGT family
-
-
-
0.000000000889
63.0
View
YHH3_k127_4164542_4
VTC domain
-
-
-
0.0002615
48.0
View
YHH3_k127_4207337_0
Belongs to the peptidase S41A family
K03797
GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016787,GO:0019538,GO:0023052,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1901564
3.4.21.102
0.00000000000000000000000000000000000000000000000000000000000000000000007456
254.0
View
YHH3_k127_4207337_1
ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
K06942
-
-
0.0000000000000000000000000000000000000000000000000000000000000000009467
234.0
View
YHH3_k127_4207337_2
Single-stranded DNA-binding protein
K03111
-
-
0.0000000000000000000000000000000002019
138.0
View
YHH3_k127_4207337_3
Binds together with S18 to 16S ribosomal RNA
K02990
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904
-
0.00000000000001209
77.0
View
YHH3_k127_4207337_4
Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
K02963
-
-
0.0000000006841
62.0
View
YHH3_k127_4307101_0
DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
K02343
-
2.7.7.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002111
294.0
View
YHH3_k127_4307101_1
May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
K06187
-
-
0.00000000000000000000000000000000000000000000000000000000002721
211.0
View
YHH3_k127_4307101_2
Belongs to the class-I aminoacyl-tRNA synthetase family
K01883
-
6.1.1.16
0.000000000000000000000000000000000000004625
148.0
View
YHH3_k127_4307101_3
The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
K01056
-
3.1.1.29
0.0000000000000000000000000000000000000347
149.0
View
YHH3_k127_4307101_4
Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
K01489,K03474,K03595,K07042
GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141
2.6.99.2,3.5.4.5
0.000000000000000003328
88.0
View
YHH3_k127_4307101_5
Metalloprotease
K11749
-
-
0.000000000000118
73.0
View
YHH3_k127_4307101_6
Yqey-like protein
K09117
-
-
0.00000006845
58.0
View
YHH3_k127_4307101_7
Belongs to the bacterial ribosomal protein bS21 family
K02970
-
-
0.00001045
51.0
View
YHH3_k127_4322312_0
Penicillin-binding Protein dimerisation domain
K03587,K08384
GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681
3.4.16.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358
373.0
View
YHH3_k127_4322312_1
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
K03438
-
2.1.1.199
0.00000000000000000000000000000000000000000000000000000000000000000009837
241.0
View
YHH3_k127_4322312_2
Domain present in phytochromes and cGMP-specific phosphodiesterases.
-
-
-
0.0000000000000000000000000000000000000000004639
169.0
View
YHH3_k127_4322312_3
Belongs to the MraZ family
K03925
-
-
0.00000000000000000000000001804
113.0
View
YHH3_k127_4322312_4
Belongs to the UPF0102 family
K07460
-
-
0.00000000000000000000005749
102.0
View
YHH3_k127_4322312_5
PFAM response regulator receiver
K07657
-
-
0.00000000000000000002361
95.0
View
YHH3_k127_4322312_6
TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family
-
-
-
0.0000000000000000005106
98.0
View
YHH3_k127_4322312_7
Belongs to the class-II aminoacyl-tRNA synthetase family
K01880
GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101
6.1.1.14
0.0000001246
53.0
View
YHH3_k127_4326380_0
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
K02935
-
-
0.00000000000000000000000000000000004367
138.0
View
YHH3_k127_4326380_1
Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
K02864
-
-
0.0000000000000000000000000000001381
130.0
View
YHH3_k127_4326380_2
DNA recombination-mediator protein A
K04096
-
-
0.0000000000000000000006199
99.0
View
YHH3_k127_4326380_3
galactose-1-phosphate uridylyltransferase
K00965
-
2.7.7.12
0.00000000000000000005984
95.0
View
YHH3_k127_4368885_0
CAAX protease self-immunity
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006811
388.0
View
YHH3_k127_4368885_1
-
K00960
-
2.7.7.6
0.0000000000003555
75.0
View
YHH3_k127_4415116_0
Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
K03628
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743
422.0
View
YHH3_k127_4415116_1
LysM domain M23 M37 peptidase domain protein
-
-
-
0.0000000005077
68.0
View
YHH3_k127_4509731_0
Actin
K03569
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004343
374.0
View
YHH3_k127_4509731_1
arginyl-tRNA aminoacylation
K01537,K01887,K02890
GO:0000959,GO:0002181,GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031974,GO:0032543,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070127,GO:0070144,GO:0071704,GO:0090304,GO:0140053,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
3.6.3.8,6.1.1.19
0.000000000000000000000000000000000000000000000000000000000002555
231.0
View
YHH3_k127_4509731_2
Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
K00940
GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006165,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:1901360
2.7.4.6
0.000000000000000000000000000000000000000000000001072
180.0
View
YHH3_k127_4509731_3
domain protein
K02238
-
-
0.00000000000000000000000000000000000005095
153.0
View
YHH3_k127_4509731_4
Glycosyl transferase, WecB TagA CpsF family
K05946
-
2.4.1.187
0.000000000000000000000002538
113.0
View
YHH3_k127_4509731_5
PFAM ComEC Rec2-related protein
K02238
-
-
0.00000000000000000000003036
109.0
View
YHH3_k127_4509731_6
-
-
-
-
0.000006992
58.0
View
YHH3_k127_4509731_7
PQQ-like domain
-
-
-
0.0001711
53.0
View
YHH3_k127_4509731_8
Sortase family
K07284
-
3.4.22.70
0.000184
51.0
View
YHH3_k127_4509731_9
Recombinase zinc beta ribbon domain
-
-
-
0.0003852
45.0
View
YHH3_k127_4515018_0
cysteine-tRNA ligase activity
K01883
GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
6.1.1.16
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007839
339.0
View
YHH3_k127_4515018_1
ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
K06942
-
-
0.000000000000000000000000000000000000002932
148.0
View
YHH3_k127_4515018_2
Lamin Tail Domain
-
-
-
0.000000456
63.0
View
YHH3_k127_4575652_0
3-oxo-5-alpha-steroid 4-dehydrogenase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751
413.0
View
YHH3_k127_4575652_1
Dihydroxyacetone kinase family
K07030
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001665
280.0
View
YHH3_k127_4662289_0
Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
K00773
-
2.4.2.29
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009135
287.0
View
YHH3_k127_4662289_1
Protein of unknown function (DUF3179)
-
-
-
0.0000000000000000000000000000000000000000000000000000000001451
216.0
View
YHH3_k127_4662289_2
Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
K00806
-
2.5.1.31
0.00000000000000000000000000000000000000000000008902
178.0
View
YHH3_k127_4662289_3
PFAM ROK family protein
K00845
-
2.7.1.2
0.00000000000000000000000000001943
130.0
View
YHH3_k127_4662289_4
Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
K03177
-
5.4.99.25
0.0000007594
58.0
View
YHH3_k127_4704896_0
Glycosyl hydrolases family 18
-
-
-
0.000000000000000000000000000000000000001383
163.0
View
YHH3_k127_4704896_1
Polysaccharide biosynthesis protein
-
-
-
0.0000000000000000000000000000002634
138.0
View
YHH3_k127_4704896_3
COG1404 Subtilisin-like serine proteases
K13276
GO:0005575,GO:0005576
-
0.0000000000000378
81.0
View
YHH3_k127_4704896_4
-O-antigen
K02847,K13009,K16705
GO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
-
0.00000000006833
74.0
View
YHH3_k127_4786551_0
NYN domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000009331
214.0
View
YHH3_k127_4786551_1
COG0330 Membrane protease subunits stomatin prohibitin homologs
-
-
-
0.000000000000000000000000000000000000000000000000000000011
206.0
View
YHH3_k127_4786551_2
Catalyzes the condensation of formaldehyde with tetrahydromethanopterin (H(4)MPT) to 5,10- methylenetetrahydromethanopterin
K13812
-
4.1.2.43,4.2.1.147
0.000000000000000001135
92.0
View
YHH3_k127_4786551_3
PFAM VanW family protein
K18346
-
-
0.000000001677
64.0
View
YHH3_k127_4826730_0
cell division ATP-binding protein FtsE
K09812
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000002719
253.0
View
YHH3_k127_4826730_1
Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
K00791
-
2.5.1.75
0.0000000000000000000000000000000000000000000000007674
186.0
View
YHH3_k127_4826730_2
PFAM peptidase M16 domain protein
-
-
-
0.0000000000000000000000000000000000000003426
165.0
View
YHH3_k127_4826730_3
Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
K07082
-
-
0.0000000000000000000000000000000000000004223
162.0
View
YHH3_k127_4826730_4
AI-2E family transporter
-
-
-
0.00000000000000000000002724
111.0
View
YHH3_k127_4826730_5
Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
K06168
GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360
2.8.4.3
0.000000000000000000000496
98.0
View
YHH3_k127_4826730_6
Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
K09811
-
-
0.000001268
55.0
View
YHH3_k127_4826730_7
Conserved protein
K08999
-
-
0.000001957
55.0
View
YHH3_k127_4873776_0
Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
K00943
-
2.7.4.9
0.000000000000000000000000000000000001566
146.0
View
YHH3_k127_5054904_0
lipolytic protein G-D-S-L family
-
-
-
0.000001848
59.0
View
YHH3_k127_5094586_0
DDE domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193
321.0
View
YHH3_k127_5094586_1
-
-
-
-
0.0000000000000000000000000000000000000000000003741
171.0
View
YHH3_k127_5094586_2
Pfam Transposase
-
-
-
0.0000000000000000000000000000000001207
137.0
View
YHH3_k127_5094586_3
helix_turn_helix, arabinose operon control protein
-
-
-
0.000000000000000000000000000000131
127.0
View
YHH3_k127_5094586_4
AAA domain, putative AbiEii toxin, Type IV TA system
K06926
-
-
0.00000000000000000001709
92.0
View
YHH3_k127_5094586_5
Nucleotidyltransferase domain
K07075
-
-
0.00000000000000116
79.0
View
YHH3_k127_5241378_0
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
K02355
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004174
602.0
View
YHH3_k127_5241378_1
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03046
-
2.7.7.6
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339
343.0
View
YHH3_k127_5241378_2
Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
K02950
-
-
0.0000000000000000000000000000000000000000000000001408
181.0
View
YHH3_k127_5241378_3
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
K02992
GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000006897
155.0
View
YHH3_k127_5648110_0
amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
K01873
-
6.1.1.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004921
575.0
View
YHH3_k127_5648110_1
it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
K02313
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005682
391.0
View
YHH3_k127_5648110_10
Haloacid dehalogenase-like hydrolase
-
-
-
0.00000000000000005149
90.0
View
YHH3_k127_5648110_11
-O-antigen
K02847
-
-
0.00000000005393
74.0
View
YHH3_k127_5648110_12
TIGRFAM SpoIID LytB domain
K06381
-
-
0.00001504
58.0
View
YHH3_k127_5648110_13
Bacterial PH domain
-
-
-
0.0002789
50.0
View
YHH3_k127_5648110_14
phage tail tape measure protein
-
-
-
0.0006926
49.0
View
YHH3_k127_5648110_2
Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
K01409
-
2.3.1.234
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001804
288.0
View
YHH3_k127_5648110_3
Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
K01881
-
6.1.1.15
0.000000000000000000000000000000000000000000000000000000000000000000000006953
253.0
View
YHH3_k127_5648110_4
Mur ligase, middle domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000006343
245.0
View
YHH3_k127_5648110_5
Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
K01881
-
6.1.1.15
0.000000000000000000000000000000000000000000000000000000000000005963
225.0
View
YHH3_k127_5648110_6
PFAM CobB CobQ domain protein glutamine amidotransferase
K07009
-
-
0.000000000000000000000000000000000000000000000000000000000000009576
225.0
View
YHH3_k127_5648110_7
This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
K02897
-
-
0.0000000000000000000000000000009314
130.0
View
YHH3_k127_5648110_8
the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
K03664
-
-
0.0000000000000000000000000002409
120.0
View
YHH3_k127_5648110_9
Extracellular solute-binding protein
K15770
-
-
0.00000000000000000003425
104.0
View
YHH3_k127_5674840_0
Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
K03553
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959
460.0
View
YHH3_k127_5674840_1
tRNA binding
K01885,K09698
-
6.1.1.17,6.1.1.24
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000658
413.0
View
YHH3_k127_5674840_2
Endoribonuclease that initiates mRNA decay
K18682
GO:0003674,GO:0005488,GO:0005515,GO:0042802
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065
392.0
View
YHH3_k127_5674840_3
Participates in both transcription termination and antitermination
K02600
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001526
289.0
View
YHH3_k127_5674840_4
YmdB-like protein
K09769
-
-
0.0000000000000000000000000000000000000000000000000000000000000002564
228.0
View
YHH3_k127_5674840_5
ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
K03686
-
-
0.000000000000000000000000000000000000000000000000000000000002197
220.0
View
YHH3_k127_5674840_6
Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
K03530
-
-
0.00000000000000000000000001551
110.0
View
YHH3_k127_5674840_7
Modulates RecA activity
K03565
-
-
0.00001651
53.0
View
YHH3_k127_6001838_0
phosphatidylinositol metabolic process
-
-
-
0.0002586
53.0
View
YHH3_k127_6037391_0
PFAM Glycosyl transferases group 1
-
-
-
0.00000000000000000000000000000000000000000000000008763
192.0
View
YHH3_k127_6037391_1
ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
K03686
-
-
0.000000000000000000008964
94.0
View
YHH3_k127_6037391_2
Glycosyl transferases group 1
-
-
-
0.0000000000002621
74.0
View
YHH3_k127_6155340_0
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03046
GO:0000428,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0030880,GO:0032991,GO:0040007,GO:0044424,GO:0044464,GO:0061695,GO:0071944,GO:1902494,GO:1990234
2.7.7.6
4.209e-252
805.0
View
YHH3_k127_6155340_1
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03043
-
2.7.7.6
2.749e-234
744.0
View
YHH3_k127_6392634_0
pilus assembly protein
K02662
-
-
0.00000000000000000000000000000000009406
146.0
View
YHH3_k127_6392634_1
type IV pilus modification protein PilV
K02458,K02671
-
-
0.0009203
49.0
View
YHH3_k127_6486036_0
Phospholipid methyltransferase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000006057
257.0
View
YHH3_k127_6486036_1
COG2518 Protein-L-isoaspartate carboxylmethyltransferase
K00573
-
2.1.1.77
0.0000000000000000000000000000000000000000000000000000000001012
211.0
View
YHH3_k127_6486036_2
Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
K02112
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
3.6.3.14
0.000000000000000000000000000000000000000000000000000000000222
209.0
View
YHH3_k127_6486036_3
Participates in transcription elongation, termination and antitermination
K02601
-
-
0.0000000000000000000000000000000000000000000000000000001355
205.0
View
YHH3_k127_6486036_4
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
K02867
-
-
0.000000000000000000000000000000000000000000000000003818
185.0
View
YHH3_k127_6486036_5
Peptidase M50
-
-
-
0.000000000000000000000000000000000000000006179
161.0
View
YHH3_k127_6486036_6
Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
K02863
GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000000824
158.0
View
YHH3_k127_6486036_7
Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
K03073
-
-
0.0000747
47.0
View
YHH3_k127_6486036_8
Produces ATP from ADP in the presence of a proton gradient across the membrane
K02114
-
-
0.00007875
48.0
View
YHH3_k127_6486036_9
Alpha-2-macroglobulin family
K06894
-
-
0.0003436
51.0
View
YHH3_k127_6524250_0
FAD binding domain
K07137
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009098
407.0
View
YHH3_k127_6524250_1
Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
K03470
-
3.1.26.4
0.0000000000000000000000000000000000009523
147.0
View
YHH3_k127_6686479_0
Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
K03798
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208
528.0
View
YHH3_k127_6686479_1
In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
K02335
-
2.7.7.7
0.000000000000000000000000000000000000000000000000000000000000000009544
235.0
View
YHH3_k127_6686479_2
DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
K10773
-
4.2.99.18
0.0000000000000000000000000000000000000000000000000000001028
203.0
View
YHH3_k127_6686479_3
PFAM Transketolase, C-terminal domain
K00615
-
2.2.1.1
0.0000000000000000000000000000000000000000000002587
171.0
View
YHH3_k127_6686479_4
Thioredoxin
-
-
-
0.0000000000000000000000000001392
128.0
View
YHH3_k127_6686479_5
Psort location Cytoplasmic, score
-
-
-
0.00000000000000000000002589
111.0
View
YHH3_k127_6791089_0
COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
K02243,K02652
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577
459.0
View
YHH3_k127_6791089_1
twitching motility protein
K02669
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004908
308.0
View
YHH3_k127_6791089_2
Type II secretion system (T2SS), protein F
K02653
-
-
0.000000000000000000000000000000000000000000000000000000000000000001843
239.0
View
YHH3_k127_6791089_3
A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
K02470
GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360
5.99.1.3
0.0000000000000000000000000000000824
126.0
View
YHH3_k127_6791089_4
TIGRFAM DNA polymerase III, delta prime subunit
K02341
-
2.7.7.7
0.00000000000000006725
89.0
View
YHH3_k127_6872227_1
calcium- and calmodulin-responsive adenylate cyclase activity
-
-
-
0.00006231
54.0
View
YHH3_k127_6904126_0
-
-
-
-
0.000000000000000000000001077
114.0
View
YHH3_k127_6904126_1
transcription activator, effector binding
K13653
-
-
0.0000000000000000000003519
96.0
View
YHH3_k127_6904126_2
Oxidoreductase family, NAD-binding Rossmann fold
-
-
-
0.000000000000000000002853
95.0
View
YHH3_k127_7041398_0
Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
K01868
-
6.1.1.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006125
571.0
View
YHH3_k127_7041398_1
IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
K02520
GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008
-
0.000000000000000000000000000000001147
136.0
View
YHH3_k127_7058787_0
Methyltransferase domain
-
-
-
0.0000000000000000000000000000000000000000000000000001542
195.0
View
YHH3_k127_7058787_1
Belongs to the peptidase M16 family
-
-
-
0.0000000000000000000000003601
119.0
View
YHH3_k127_7058787_2
YibE F family protein
-
-
-
0.00000000000000000002539
93.0
View
YHH3_k127_7058787_3
Dolichyl-phosphate-mannose-protein mannosyltransferase
-
-
-
0.000000000000002534
89.0
View
YHH3_k127_706166_0
Elongator protein 3, MiaB family, Radical SAM
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000853
544.0
View
YHH3_k127_706166_1
Glycosyl transferase, family 2
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000001003
274.0
View
YHH3_k127_706166_2
PFAM Glycosyl transferase family 2
-
-
-
0.000000000000000000000000000000000000000000000000000001342
201.0
View
YHH3_k127_706166_3
Dolichyl-phosphate-mannose-protein mannosyltransferase
-
-
-
0.000000000000000000000000000000000000002063
166.0
View
YHH3_k127_706166_4
Lysylphosphatidylglycerol synthase TM region
K07027
-
-
0.0000000000000000000000000002527
125.0
View
YHH3_k127_706166_5
Dolichyl-phosphate-mannose-protein mannosyltransferase
-
-
-
0.00000000000000000000009854
113.0
View
YHH3_k127_706166_6
Dolichyl-phosphate-mannose-protein mannosyltransferase
-
-
-
0.000000000000000006307
98.0
View
YHH3_k127_706166_7
COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
-
-
-
0.000000000006626
78.0
View
YHH3_k127_7075731_0
Catalyzes the formation of CDP-2,3-bis-(O- geranylgeranyl)-sn-glycerol (CDP-archaeol) from 2,3-bis-(O- geranylgeranyl)-sn-glycerol 1-phosphate (DGGGP) and CTP. This reaction is the third ether-bond-formation step in the biosynthesis of archaeal membrane lipids
K19664
-
2.7.7.67
0.000000648
58.0
View
YHH3_k127_7075731_1
Psort location CytoplasmicMembrane, score
-
-
-
0.00003683
53.0
View
YHH3_k127_7372596_0
Uncharacterised protein family UPF0052
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000001008
251.0
View
YHH3_k127_7372596_1
Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
K01929
-
6.3.2.10
0.00000000000000000000000000000000000000000000002481
185.0
View
YHH3_k127_7372596_2
First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
K01000
-
2.7.8.13
0.00000000000000000000000000000000000000000002219
174.0
View
YHH3_k127_7372596_3
TIGRFAM RNA polymerase sigma factor, sigma-70 family
K03088
-
-
0.00000000000000000000000000000003381
133.0
View
YHH3_k127_7372596_4
40-residue YVTN family beta-propeller
-
-
-
0.0000000004951
71.0
View
YHH3_k127_7372596_5
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
K03070
GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680
-
0.0000000007791
61.0
View
YHH3_k127_7372596_6
Prokaryotic N-terminal methylation motif
K02650
-
-
0.0008665
48.0
View
YHH3_k127_7467265_0
PFAM Glycosyl transferase family 2
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008477
351.0
View
YHH3_k127_7467265_1
Protein of unknown function (DUF354)
K09726
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209
328.0
View
YHH3_k127_7467265_2
Methyltransferase domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000001468
229.0
View
YHH3_k127_7467265_3
Glycosyltransferase Family 4
-
-
-
0.000000000000000000000000000000000000000000007735
171.0
View
YHH3_k127_7467265_4
3-demethylubiquinone-9 3-O-methyltransferase activity
-
-
-
0.000000000000000606
86.0
View
YHH3_k127_7542214_0
similarity to SP Q54513
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000004907
268.0
View
YHH3_k127_7629549_0
serine-type peptidase activity
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001598
286.0
View
YHH3_k127_7629549_1
-
-
-
-
0.000000000000008766
85.0
View
YHH3_k127_7720918_0
undecaprenyl-phosphate glucose phosphotransferase activity
-
-
-
0.00000000000000000000000000000000000000000000000000000000009583
210.0
View
YHH3_k127_7720918_1
ADP-glyceromanno-heptose 6-epimerase activity
-
-
-
0.0000000000001664
83.0
View
YHH3_k127_7749164_0
Synthesizes alpha-1,4-glucan chains using ADP-glucose
K00703
GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009011,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0046527,GO:0055114,GO:0071704,GO:1901576
2.4.1.21
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007616
387.0
View
YHH3_k127_7749164_1
Synthesizes alpha-1,4-glucan chains using ADP-glucose
K00703
GO:0003674,GO:0003824,GO:0016740,GO:0016757
2.4.1.21
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382
323.0
View
YHH3_k127_7749164_2
galactose-1-phosphate uridylyltransferase
K00965
-
2.7.7.12
0.0000000000000000000000000002229
122.0
View
YHH3_k127_7749164_3
Belongs to the glycosyl hydrolase 57 family
K22451
-
2.4.1.25
0.0000005342
62.0
View
YHH3_k127_7749164_4
Belongs to the glycosyl hydrolase 57 family
-
-
-
0.000002341
60.0
View
YHH3_k127_7763879_0
Glycosyltransferase like family 2
-
-
-
0.000000000000000000000000000000000000000005355
164.0
View
YHH3_k127_7763879_1
peptidase C60 sortase A and B
-
-
-
0.000000000000004908
84.0
View
YHH3_k127_7763879_2
PFAM Glycosyl transferase, group 1
-
-
-
0.000000001545
70.0
View
YHH3_k127_7763879_3
Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
K03628
GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576
-
0.0000005564
55.0
View
YHH3_k127_7814475_0
Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
K00789
-
2.5.1.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006765
381.0
View
YHH3_k127_7843138_0
Cation transporter/ATPase, N-terminus
K01535
-
3.6.3.6
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332
440.0
View
YHH3_k127_7843138_1
Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
K01491
-
1.5.1.5,3.5.4.9
0.000000000000000000000004499
104.0
View
YHH3_k127_7888894_0
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
K03701
-
-
0.0
1116.0
View
YHH3_k127_7888894_1
Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
K01007
-
2.7.9.2
1.283e-260
823.0
View
YHH3_k127_7888894_10
Glycosyltransferase family 28 N-terminal domain
K02563
-
2.4.1.227
0.000000000000000000000000000000000000000000000000000001855
205.0
View
YHH3_k127_7888894_11
Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
K00790
-
2.5.1.7
0.000000000000000000000000000000000000000000000000000005308
206.0
View
YHH3_k127_7888894_12
Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
K01356
-
3.4.21.88
0.000000000000000000000000000000000000000000000000000006856
196.0
View
YHH3_k127_7888894_13
Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
K00525
-
1.17.4.1
0.000000000000000000000000000000000000000000000000000333
190.0
View
YHH3_k127_7888894_14
Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
K01834
GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031
5.4.2.11
0.0000000000000000000000005642
113.0
View
YHH3_k127_7888894_15
Transglutaminase/protease-like homologues
-
-
-
0.0000000000000000573
95.0
View
YHH3_k127_7888894_16
Preprotein translocase SecG subunit
K03075
-
-
0.0000314
48.0
View
YHH3_k127_7888894_17
Cell division protein FtsQ
K03589
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944
-
0.0000868
53.0
View
YHH3_k127_7888894_2
damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
K03702
-
-
1.164e-242
768.0
View
YHH3_k127_7888894_3
Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
K03531
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165
401.0
View
YHH3_k127_7888894_4
Transglycosylase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505
411.0
View
YHH3_k127_7888894_5
Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
K01689
-
4.2.1.11
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257
320.0
View
YHH3_k127_7888894_6
Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
K03590
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004557
311.0
View
YHH3_k127_7888894_7
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
K03703
-
-
0.00000000000000000000000000000000000000000000000000000000000000000001733
249.0
View
YHH3_k127_7888894_8
SNARE associated Golgi protein
K03975
-
-
0.000000000000000000000000000000000000000000000000000000000000000004244
235.0
View
YHH3_k127_7888894_9
Belongs to the SEDS family
K03588
-
-
0.0000000000000000000000000000000000000000000000000000000000000003086
235.0
View
YHH3_k127_7930527_0
Responsible for synthesis of pseudouridine from uracil
K06180
-
5.4.99.23
0.000000000000000000000000000000000000000000000008158
180.0
View
YHH3_k127_7930527_1
Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
K02356
-
-
0.00000000000000000000000000000000004359
141.0
View
YHH3_k127_7930527_2
Histidine kinase
-
-
-
0.0000000000000001724
83.0
View
YHH3_k127_7930527_3
Prokaryotic dksA/traR C4-type zinc finger
K06204
-
-
0.00000005173
64.0
View
YHH3_k127_8051249_0
PFAM TrkA-N domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007038
316.0
View
YHH3_k127_8051249_1
membrane protein, required for N-linked glycosylation
K07151
-
2.4.99.18
0.00000000000000000000000000000000000000000000000000000000000000000000000001358
260.0
View
YHH3_k127_8051249_2
Predicted membrane protein (DUF2177)
-
-
-
0.000000000000000496
78.0
View
YHH3_k127_8099600_0
PFAM CoA-binding domain protein
K01905,K22224
-
6.2.1.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009771
494.0
View
YHH3_k127_8099600_1
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
K00174
-
1.2.7.11,1.2.7.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857
409.0
View
YHH3_k127_8099600_2
oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor
K00175
-
1.2.7.11,1.2.7.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000004327
276.0
View
YHH3_k127_8099600_3
Nickel-dependent hydrogenase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000003088
265.0
View
YHH3_k127_8099600_4
Type II IV secretion system protein
K02454,K02652
-
-
0.000000000000000000000000000000000000000000000000004739
190.0
View
YHH3_k127_8099600_5
Glyoxalase-like domain
K06996
-
-
0.000000000000000000000000000000004809
132.0
View
YHH3_k127_8099600_6
Zinc-dependent metalloprotease
-
-
-
0.0000000000000000000000000007657
126.0
View
YHH3_k127_8099600_7
NADH ubiquinone oxidoreductase, 20 Kd subunit
-
-
-
0.000000000000002122
82.0
View
YHH3_k127_8099600_8
-
-
-
-
0.000000004062
66.0
View
YHH3_k127_8099600_9
DnaJ-class molecular chaperone with C-terminal Zn finger domain
-
-
-
0.00000001718
59.0
View
YHH3_k127_8286812_0
ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01537
-
3.6.3.8
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007461
532.0
View
YHH3_k127_8286812_1
DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
K04485
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607
422.0
View
YHH3_k127_8286812_10
-
-
-
-
0.00000000000000000000002592
100.0
View
YHH3_k127_8286812_11
Unextendable partial coding region
-
-
-
0.0000000000000000000003616
97.0
View
YHH3_k127_8286812_12
-
-
-
-
0.0000000000000000007023
90.0
View
YHH3_k127_8286812_13
COG NOG14600 non supervised orthologous group
-
-
-
0.00000000000000002596
81.0
View
YHH3_k127_8286812_14
the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
-
-
-
0.000000000000009713
76.0
View
YHH3_k127_8286812_15
Fic/DOC family
-
-
-
0.00000000000009227
81.0
View
YHH3_k127_8286812_16
COG NOG38524 non supervised orthologous group
-
-
-
0.0000000000008535
73.0
View
YHH3_k127_8286812_17
-
-
-
-
0.000000000001516
68.0
View
YHH3_k127_8286812_18
Peptidase family M23
-
-
-
0.00000000004946
76.0
View
YHH3_k127_8286812_19
-
-
-
-
0.00000000005845
66.0
View
YHH3_k127_8286812_2
C-terminal, D2-small domain, of ClpB protein
K03696
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742
387.0
View
YHH3_k127_8286812_20
-
-
-
-
0.0000000002863
62.0
View
YHH3_k127_8286812_21
-
-
-
-
0.00000001093
59.0
View
YHH3_k127_8286812_23
-
-
-
-
0.00000005626
54.0
View
YHH3_k127_8286812_24
Mannosyltransferase (PIG-V)
-
-
-
0.0000001936
63.0
View
YHH3_k127_8286812_25
-
-
-
-
0.0000003934
51.0
View
YHH3_k127_8286812_26
-
-
-
-
0.000008697
50.0
View
YHH3_k127_8286812_27
Peptidase_C39 like family
-
-
-
0.00001237
55.0
View
YHH3_k127_8286812_28
ORF located using Blastx
-
-
-
0.0001025
46.0
View
YHH3_k127_8286812_29
-
-
-
-
0.0004828
44.0
View
YHH3_k127_8286812_3
Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
K00566
GO:0002097,GO:0002098,GO:0002143,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360
2.8.1.13
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277
318.0
View
YHH3_k127_8286812_30
-
-
-
-
0.0005102
43.0
View
YHH3_k127_8286812_31
A G-specific DNA glycosylase
K03575
-
-
0.0006633
48.0
View
YHH3_k127_8286812_4
PFAM RNA binding S1 domain protein
K02945
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006289
300.0
View
YHH3_k127_8286812_5
PFAM Glycosyl transferase, group 1
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000001013
259.0
View
YHH3_k127_8286812_6
it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
K03629
GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576
-
0.00000000000000000000000000000000000000000000000000000199
204.0
View
YHH3_k127_8286812_7
Large family of predicted nucleotide-binding domains
-
GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944
-
0.0000000000000000000000000000000000000000000000008492
186.0
View
YHH3_k127_8286812_8
Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
K10563
-
3.2.2.23,4.2.99.18
0.000000000000000000000000000000000000000000000004345
183.0
View
YHH3_k127_8286812_9
Protein of unknown function DUF43
K07057
-
2.5.1.128
0.000000000000000000000001586
117.0
View
YHH3_k127_8538188_0
A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
K02469
-
5.99.1.3
1.351e-245
784.0
View
YHH3_k127_8538188_1
A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
K02470
-
5.99.1.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981
613.0
View
YHH3_k127_8538188_2
Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
K03470
-
3.1.26.4
0.000000000000004601
78.0
View
YHH3_k127_8541048_0
Belongs to the phosphoglycerate kinase family
K00927,K01803
-
2.7.2.3,5.3.1.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644
352.0
View
YHH3_k127_8541048_1
Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
K01358
GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0006355,GO:0006508,GO:0006515,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
3.4.21.92
0.00000000000000000000000000000000000000000000000000000000000000003025
228.0
View
YHH3_k127_8541048_2
protein of Bacteria UniRef RepID
-
-
-
0.000000000000000000004609
104.0
View
YHH3_k127_8541048_3
Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
K03545
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
-
0.000000000000007018
85.0
View
YHH3_k127_8541048_4
AAA ATPase domain
-
-
-
0.0005039
53.0
View
YHH3_k127_8643252_0
Glycosyltransferase like family 2
K12992
-
-
0.0000000000000000000000000000000000000000000000003683
181.0
View
YHH3_k127_8643252_1
Belongs to the D-alanine--D-alanine ligase family
K01921
-
6.3.2.4
0.000000000000000000000000000000000000000932
159.0
View
YHH3_k127_8643252_2
-
-
-
-
0.000001036
51.0
View
YHH3_k127_8643252_3
MFS transporter
-
-
-
0.00001035
55.0
View
YHH3_k127_8698562_0
Transposase IS200 like
-
-
-
0.0000000000000000000000000000000000007902
147.0
View
YHH3_k127_8698562_1
COG NOG14600 non supervised orthologous group
-
-
-
0.00000000000000000000000008097
106.0
View
YHH3_k127_8698562_2
Putative porin
-
-
-
0.000000000000000000002192
106.0
View
YHH3_k127_8698562_3
-
-
-
-
0.0000000174
56.0
View
YHH3_k127_8698562_4
-
-
-
-
0.0000008507
51.0
View
YHH3_k127_8698562_5
-
-
-
-
0.0008002
42.0
View
YHH3_k127_8862584_0
Bacterial DNA topoisomeraes I ATP-binding domain
K03168
-
5.99.1.2
8.641e-196
632.0
View
YHH3_k127_8862584_1
TIGRFAM cell shape determining protein, MreB Mrl family
K03569
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000712
391.0
View
YHH3_k127_8862584_10
Involved in formation and maintenance of cell shape
K03570
-
-
0.000000000002263
76.0
View
YHH3_k127_8862584_11
Belongs to the bacterial ribosomal protein bL28 family
K02902
-
-
0.00000005602
57.0
View
YHH3_k127_8862584_2
Penicillin-binding protein 2
K05515
-
3.4.16.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292
326.0
View
YHH3_k127_8862584_3
Belongs to the universal ribosomal protein uS2 family
K02967
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000000000000000000000000000000000000005436
227.0
View
YHH3_k127_8862584_4
Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
K00604
-
2.1.2.9
0.000000000000000000000000000000000000000000000001159
186.0
View
YHH3_k127_8862584_5
zinc metalloprotease
K04771,K11749,K16922
GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0040007,GO:0043170,GO:0043856,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045152,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
3.4.21.107
0.0000000000000000000000000000000000000000001658
171.0
View
YHH3_k127_8862584_6
DNA recombination-mediator protein A
K03168,K04096
-
5.99.1.2
0.00000000000000000000000000000000000003476
154.0
View
YHH3_k127_8862584_7
cytoplasmic translational termination
K02838
GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0030312,GO:0032984,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
-
0.000000000000000000000000000000000005924
143.0
View
YHH3_k127_8862584_8
Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
K02357
-
-
0.000000000000000000000000000000000548
136.0
View
YHH3_k127_8862584_9
Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
K01462
-
3.5.1.88
0.000000000000000000000000002664
118.0
View
YHH3_k127_8875402_0
SdrD B-like domain
-
-
-
0.0000000001515
75.0
View
YHH3_k127_8875402_1
Ribosomal protein L34
K02914
-
-
0.0000000003744
61.0
View
YHH3_k127_8875402_2
Sortase family
K07284
-
3.4.22.70
0.00000003934
63.0
View
YHH3_k127_8875402_3
RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
K03536
-
3.1.26.5
0.000005871
52.0
View
YHH3_k127_8879273_0
PEP-CTERM motif
-
-
-
0.000001143
58.0
View
YHH3_k127_8888433_0
PFAM glycosyl transferase group 1
-
-
-
0.00000000000000000000000000000000000000000000000000000009551
205.0
View
YHH3_k127_8888433_1
PFAM glycosyl transferase group 1
-
-
-
0.0000000000000000000000000000000000000000000000000000284
202.0
View
YHH3_k127_8888433_2
dolichyl-phosphate-mannose-protein mannosyltransferase
-
-
-
0.000000000000000000000000000000001305
151.0
View
YHH3_k127_8888433_3
transferase activity, transferring glycosyl groups
-
-
-
0.000000000000000000000000000002464
134.0
View
YHH3_k127_8888433_4
Membrane protein involved in the export of O-antigen and teichoic acid
-
-
-
0.000018
57.0
View
YHH3_k127_8917409_0
PFAM TrkA-N domain protein
-
-
-
0.00000000000000000000000000005852
122.0
View
YHH3_k127_8917409_1
ComF family
K02242
-
-
0.00000000000000000000000001733
117.0
View
YHH3_k127_8917409_2
Glycosyltransferase family 87
-
-
-
0.00002567
56.0
View
YHH3_k127_8977855_0
Participates in initiation and elongation during chromosome replication
K02314
-
3.6.4.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000786
428.0
View
YHH3_k127_8977855_1
Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
K02835
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001109
291.0
View
YHH3_k127_8977855_2
Beta-lactamase superfamily domain
-
-
-
0.000000000000000000000000000000000000000000000000000003561
197.0
View
YHH3_k127_8977855_3
Binds the 23S rRNA
K02909
-
-
0.0000000000000000000000143
104.0
View
YHH3_k127_8977855_4
drug metabolite transporter
-
-
-
0.000000000000008348
85.0
View
YHH3_k127_8977855_5
Belongs to the peptidase S41A family
K03797
GO:0003674,GO:0003824,GO:0004175,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009653,GO:0009987,GO:0016787,GO:0019538,GO:0023052,GO:0030154,GO:0030288,GO:0030313,GO:0030435,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043603,GO:0043900,GO:0043902,GO:0043934,GO:0044237,GO:0044238,GO:0044464,GO:0046983,GO:0048518,GO:0048522,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1900190,GO:1900192,GO:1901564
3.4.21.102
0.000001013
52.0
View
YHH3_k127_9003546_0
Lamin Tail Domain
-
-
-
0.0000000000000006753
92.0
View
YHH3_k127_9003546_1
Signal peptidase I
K13280
-
3.4.21.89
0.00000000000009453
79.0
View
YHH3_k127_9291686_0
Predicted membrane protein (DUF2207)
-
-
-
0.0000000000000000000000000000000000006431
156.0
View
YHH3_k127_9319722_0
Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
K04077
-
-
1.076e-205
653.0
View
YHH3_k127_9319722_1
Male sterility protein
K08678
-
4.1.1.35
0.0000000000000000000000000000000000000000005141
182.0
View
YHH3_k127_9319722_2
Protein of unknown function (DUF4012)
-
-
-
0.00000000000000000000000000000000000000003309
176.0
View
YHH3_k127_9319722_3
PFAM ribonuclease H
K03469,K06864
-
3.1.26.4
0.000000000000000000000000000000001288
134.0
View
YHH3_k127_9319722_4
Domain of unknown function DUF87
-
-
-
0.0000000000000000000000000002834
122.0
View
YHH3_k127_9319722_5
Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
K04078
GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0019899,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0035375,GO:0035966,GO:0040007,GO:0042221,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046872,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065007,GO:0071944,GO:0080090,GO:1903506,GO:2000112,GO:2001141
-
0.00000000000000000000000001345
110.0
View
YHH3_k127_9319722_6
nucleotidyltransferase activity
-
-
-
0.00000000004502
73.0
View
YHH3_k127_9319722_7
multi-organism process
-
-
-
0.0000000001036
71.0
View
YHH3_k127_9328970_0
An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
K03979
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193
340.0
View
YHH3_k127_9328970_1
Peptidoglycan-binding LysM
-
-
-
0.0000000000000000000000000000000000000287
154.0
View
YHH3_k127_9328970_2
COG1555 DNA uptake protein and related DNA-binding proteins
K02237
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
-
0.000000000000000007127
92.0
View
YHH3_k127_9328970_3
regulatory protein, arsR
K03892
-
-
0.00000000127
63.0
View
YHH3_k127_9328970_4
TPR repeat
-
-
-
0.0000002475
64.0
View
YHH3_k127_9383654_0
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
K03070
-
-
1.592e-233
749.0
View
YHH3_k127_9383654_1
Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
K01875
-
6.1.1.11
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503
377.0
View
YHH3_k127_9383654_2
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
K02986
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112
-
0.0000000000000000000000000000000000000000000000000000000000005558
216.0
View
YHH3_k127_9383654_3
Bacitracin resistance protein BacA
K06153
-
3.6.1.27
0.00000000000000000000000000000000000000000000000001525
188.0
View
YHH3_k127_9383654_4
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
K02952
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000002149
147.0
View
YHH3_k127_9383654_5
Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
K02948
-
-
0.000000000000000000000000000000000003531
141.0
View
YHH3_k127_9383654_6
One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
K02518
-
-
0.00000000000000000009783
91.0
View
YHH3_k127_9383654_7
Belongs to the bacterial ribosomal protein bL36 family
K02919
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000006473
69.0
View
YHH3_k127_9383654_8
Methyltransferase activity. It is involved in the biological process described with metabolic process
K08513
GO:0003674,GO:0005488,GO:0005515
-
0.0000000005604
68.0
View
YHH3_k127_9455775_0
Catalyzes the attachment of glycine to tRNA(Gly)
K01880
GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.14
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554
346.0
View
YHH3_k127_9455775_1
Involved in DNA repair and RecF pathway recombination
K03584
-
-
0.00000000000002245
80.0
View
YHH3_k127_9725250_0
ATP-dependent Clp protease, ATP-binding subunit ClpC
K03696
GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734
358.0
View
YHH3_k127_9725250_1
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03040
-
2.7.7.6
0.00000000000000000000000000000000000000000000000000000000000000000000001156
252.0
View
YHH3_k127_9725250_2
Belongs to the UPF0758 family
K03630
-
-
0.00000000000000000000000000000000000000000000007971
179.0
View
YHH3_k127_9725250_3
This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
K02871
GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000003899
155.0
View
YHH3_k127_9725250_4
Belongs to the universal ribosomal protein uS9 family
K02996
-
-
0.0000000000000000000000000308
112.0
View
YHH3_k127_9725250_5
ribosomal protein L17
K02879
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904
-
0.0000000000000000000000001835
111.0
View
YHH3_k127_9725250_6
Helix-turn-helix XRE-family like proteins
-
-
-
0.0005888
46.0
View
YHH3_k127_9740252_0
Destroys radicals which are normally produced within the cells and which are toxic to biological systems
K04564
-
1.15.1.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000002412
278.0
View
YHH3_k127_9740252_1
4-amino-4-deoxy-L-arabinose transferase activity
-
-
-
0.0000000000000000000000000000000000000000000000000002571
204.0
View
YHH3_k127_9740252_2
Domain of unknown function (DUF4349)
-
-
-
0.00000000000001074
85.0
View
YHH3_k127_9804145_0
Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
K00384
-
1.8.1.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452
336.0
View
YHH3_k127_9804145_1
4-amino-4-deoxy-L-arabinose transferase activity
-
-
-
0.0000000000000000000000000009318
119.0
View
YHH3_k127_9992961_0
Belongs to the class-II aminoacyl-tRNA synthetase family
K04567
-
6.1.1.6
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084
471.0
View
YHH3_k127_9992961_1
Single-stranded-DNA-specific exonuclease RecJ
K07462
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917
334.0
View
YHH3_k127_9992961_2
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
K03072,K12257
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007969
301.0
View
YHH3_k127_9992961_3
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
K03074
-
-
0.00000000000000000000000000000000000000000000000000000000000000000002588
243.0
View
YHH3_k127_9992961_4
Protein of unknown function (DUF3048) C-terminal domain
-
-
-
0.000000000000000000000000000000000000000000008196
178.0
View
YHH3_k127_9992961_5
Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
K03624
-
-
0.000000000000000000000000000000000006653
141.0
View
YHH3_k127_9992961_6
nucleotidyltransferase activity
K07061
-
-
0.00000000000000000000002858
106.0
View
