Overview

ID MAG04631
Name YYD2_bin.10
Sample SMP0125
Taxonomy
Kingdom Bacteria
Phylum Chloroflexota
Class Anaerolineae
Order Anaerolineales
Family Villigracilaceae
Genus Denitrolinea
Species
Assembly information
Completeness (%) 68.35
Contamination (%) 3.58
GC content (%) 59.0
N50 (bp) 7,290
Genome size (bp) 2,154,363

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2033

Gene name Description KEGG GOs EC E-value Score Sequence
YYD2_k127_1003039_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 2.259e-232 733.0
YYD2_k127_1003039_1 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000001219 93.0
YYD2_k127_1003039_2 family 25 K01185,K07273 GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.17 0.000000008078 66.0
YYD2_k127_1013094_0 PFAM magnesium chelatase ChlI subunit K07391 - - 3.877e-231 724.0
YYD2_k127_1013094_1 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 6.73e-221 692.0
YYD2_k127_1013094_2 (Rhomboid) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007708 320.0
YYD2_k127_1013094_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000002157 153.0
YYD2_k127_1013094_4 - - - - 0.000000000000000000000000000000005637 132.0
YYD2_k127_1015093_0 Flavin containing amine oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 427.0
YYD2_k127_1015093_1 Carboxylesterase family - - - 0.000000000000000000000000000000000000000000000000003474 194.0
YYD2_k127_1015093_2 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.00000000004846 66.0
YYD2_k127_1015093_3 PFAM Squalene phytoene synthase K02291 GO:0003674,GO:0003824,GO:0004337,GO:0004659,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016740,GO:0016765,GO:0016767,GO:0042440,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046148,GO:0071704,GO:1901576 2.5.1.32,2.5.1.99 0.00000001923 65.0
YYD2_k127_1017701_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 2.738e-203 650.0
YYD2_k127_1017701_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008206 513.0
YYD2_k127_1017701_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 516.0
YYD2_k127_1017701_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007155 292.0
YYD2_k127_1017701_4 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease - - - 0.000000000000000000000000000000000000000000000000000281 192.0
YYD2_k127_102350_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.238e-253 795.0
YYD2_k127_102350_1 Participates in both transcription termination and antitermination K02600 - - 2.63e-211 674.0
YYD2_k127_102350_10 Molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0040007,GO:0042597,GO:0043167,GO:0043168,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0051704 - 0.00000000000000000004813 100.0
YYD2_k127_102350_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 443.0
YYD2_k127_102350_3 PFAM oxidoreductase, molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 339.0
YYD2_k127_102350_4 PFAM phosphoesterase, RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 301.0
YYD2_k127_102350_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000668 276.0
YYD2_k127_102350_6 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000005408 239.0
YYD2_k127_102350_7 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000000000000000003425 161.0
YYD2_k127_102350_8 Protein of unknown function (DUF448) K07742 - - 0.00000000000000000000000000000005035 127.0
YYD2_k127_102350_9 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.00000000000000000000001393 103.0
YYD2_k127_1076455_0 PFAM Cytochrome C assembly protein K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 522.0
YYD2_k127_1076455_10 - - - - 0.0000000000000000000000000000000003215 140.0
YYD2_k127_1076455_11 zinc-ribbon domain - - - 0.0000000000000000000000000005303 121.0
YYD2_k127_1076455_12 COG0202 DNA-directed RNA polymerase, alpha subunit 40 kD subunit - - - 0.000004855 57.0
YYD2_k127_1076455_13 lactoylglutathione lyase activity - - - 0.0007445 47.0
YYD2_k127_1076455_2 PFAM ABC transporter related K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 309.0
YYD2_k127_1076455_3 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 317.0
YYD2_k127_1076455_4 PFAM cytochrome c-type biogenesis protein CcmB K02194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 294.0
YYD2_k127_1076455_5 PFAM Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007612 280.0
YYD2_k127_1076455_6 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000007115 214.0
YYD2_k127_1076455_7 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000000000000000000002524 213.0
YYD2_k127_1076455_8 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000000001015 162.0
YYD2_k127_1076455_9 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.00000000000000000000000000000000000007327 149.0
YYD2_k127_1085527_0 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 373.0
YYD2_k127_1085527_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 312.0
YYD2_k127_1085527_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 308.0
YYD2_k127_1085527_3 Amidinotransferase K01482 - 3.5.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002571 281.0
YYD2_k127_1085527_5 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000003887 118.0
YYD2_k127_1085527_6 serine-type endopeptidase activity K04771,K08372 - 3.4.21.107 0.0000000000000002701 89.0
YYD2_k127_1085527_7 - - - - 0.0000000000008461 70.0
YYD2_k127_1100261_0 Uncharacterized protein conserved in bacteria (DUF2200) - - - 0.0000000000000000000000000000000000000000000000000005593 185.0
YYD2_k127_1100261_1 nucleotide catabolic process - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000001671 130.0
YYD2_k127_1100261_2 xylan catabolic process K01179 - 3.2.1.4 0.000000002147 71.0
YYD2_k127_1142237_0 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 483.0
YYD2_k127_1142237_1 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 358.0
YYD2_k127_1142237_2 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 345.0
YYD2_k127_1142237_3 RNA-binding protein - - - 0.0000000000000000000000005533 109.0
YYD2_k127_1142237_4 domain protein - - - 0.000000000000000000002156 102.0
YYD2_k127_1142237_5 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02396,K02397 - - 0.0000000243 59.0
YYD2_k127_1146641_0 PFAM Methicillin resistance protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 379.0
YYD2_k127_1146641_1 PFAM Methicillin resistance protein - - - 0.00000000000000000000000000000418 121.0
YYD2_k127_1146641_2 Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source K05396 - 4.4.1.15 0.00000004526 54.0
YYD2_k127_1146641_3 Acetyltransferase (GNAT) domain K05363,K11693 - 2.3.2.10,2.3.2.16 0.00001675 50.0
YYD2_k127_1149123_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 317.0
YYD2_k127_1149123_1 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000003246 253.0
YYD2_k127_1149123_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000008543 199.0
YYD2_k127_1151861_0 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000001504 135.0
YYD2_k127_1218723_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 507.0
YYD2_k127_1218723_1 TIGRFAM Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 422.0
YYD2_k127_1218723_2 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000002399 246.0
YYD2_k127_1238731_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 3.188e-223 699.0
YYD2_k127_1238731_1 metal ion binding. It is involved in the biological process described with 'de novo' pyrimidine nucleobase biosynthetic process K11540 GO:0000050,GO:0000052,GO:0000166,GO:0001882,GO:0001884,GO:0002119,GO:0002134,GO:0002164,GO:0003674,GO:0003824,GO:0004070,GO:0004087,GO:0004088,GO:0004151,GO:0004672,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006220,GO:0006221,GO:0006228,GO:0006464,GO:0006468,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009887,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0016053,GO:0016301,GO:0016310,GO:0016363,GO:0016597,GO:0016740,GO:0016741,GO:0016743,GO:0016772,GO:0016773,GO:0016787,GO:0016810,GO:0016812,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0017144,GO:0018107,GO:0018130,GO:0018193,GO:0018210,GO:0019103,GO:0019240,GO:0019438,GO:0019538,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0019899,GO:0022612,GO:0030424,GO:0030554,GO:0031406,GO:0031667,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032549,GO:0032551,GO:0032553,GO:0032555,GO:0032557,GO:0032559,GO:0032868,GO:0032991,GO:0033267,GO:0034399,GO:0034404,GO:0034641,GO:0034654,GO:0035295,GO:0035639,GO:0036094,GO:0036211,GO:0036477,GO:0042221,GO:0042455,GO:0042594,GO:0042802,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043434,GO:0043436,GO:0043603,GO:0043604,GO:0043679,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0046051,GO:0046112,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046394,GO:0046483,GO:0046777,GO:0046872,GO:0046914,GO:0048513,GO:0048565,GO:0048731,GO:0048732,GO:0048856,GO:0050896,GO:0055086,GO:0055123,GO:0060465,GO:0070013,GO:0070335,GO:0070406,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:0097458,GO:0098793,GO:0120025,GO:0120038,GO:0140096,GO:0150034,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901652,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1905905 2.1.3.2,3.5.2.3,6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 422.0
YYD2_k127_1250495_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 552.0
YYD2_k127_1250495_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003053 384.0
YYD2_k127_1250495_2 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 301.0
YYD2_k127_1250495_3 PFAM Glycosyl transferase family 2 K14597 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000255 291.0
YYD2_k127_1250495_4 Phosphoribosyl transferase domain K07101 - - 0.000000000000000000000000000000000000000000000000000000000000000000001342 239.0
YYD2_k127_1250495_5 PFAM SMC domain protein K03546 - - 0.0000000000000000000000000000000000000000000006706 168.0
YYD2_k127_1250495_6 NapC/NirT cytochrome c family, N-terminal region K15876 - - 0.0000000000000000000000000000000000000000004783 162.0
YYD2_k127_1250495_7 Transcriptional regulator, Crp Fnr family K10914,K21563 - - 0.00000000000000000000000000000000000001067 153.0
YYD2_k127_1250495_8 - - - - 0.000000000000000004147 95.0
YYD2_k127_1250495_9 - - - - 0.00000000000000002874 87.0
YYD2_k127_1268018_0 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 3.73e-261 816.0
YYD2_k127_1268018_1 inositol 2-dehydrogenase activity K18431 - 2.7.7.82 0.0000000000000000000000000000000000002847 145.0
YYD2_k127_1307854_0 transferase activity, transferring glycosyl groups K09118,K13693,K21349 - 2.4.1.266,2.4.1.268 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007226 503.0
YYD2_k127_1307854_1 Sodium/hydrogen exchanger family K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 317.0
YYD2_k127_1307854_2 Cyclic-di-AMP receptor - - - 0.000000000000000000000002574 119.0
YYD2_k127_1307854_3 Cyclic-di-AMP receptor - - - 0.000000009192 57.0
YYD2_k127_1331036_0 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 566.0
YYD2_k127_1331036_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 319.0
YYD2_k127_1331036_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000002814 196.0
YYD2_k127_1345066_0 Alpha amylase, catalytic domain - - - 0.0 1018.0
YYD2_k127_1375327_0 DEAD DEAH box helicase domain protein K06877 - - 1.051e-290 915.0
YYD2_k127_1375327_1 lysyltransferase activity K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007393 269.0
YYD2_k127_1375327_2 Putative neutral zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000000009652 214.0
YYD2_k127_1375327_3 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000003746 164.0
YYD2_k127_1375327_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000003233 65.0
YYD2_k127_1417727_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 323.0
YYD2_k127_1417727_1 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000002353 229.0
YYD2_k127_1417727_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000000000006057 147.0
YYD2_k127_1470769_0 TIGRFAM LAO AO transport system ATPase K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 329.0
YYD2_k127_1470769_1 PFAM cobalamin B12-binding domain protein K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000002083 216.0
YYD2_k127_1470769_2 - - - - 0.0000000000000000000000000000000000000000000000000000000002099 211.0
YYD2_k127_1470769_3 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000253 207.0
YYD2_k127_1470769_5 - - - - 0.000005261 53.0
YYD2_k127_1505551_0 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 589.0
YYD2_k127_1505551_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 486.0
YYD2_k127_1505551_2 PFAM NAD-dependent epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 426.0
YYD2_k127_1505551_3 cytidylyl-transferase K00983 - 2.7.7.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008627 291.0
YYD2_k127_1505551_4 PFAM ABC-2 type transporter K09690 - - 0.00000000000000000000000000000000000000000000000000002148 192.0
YYD2_k127_1505551_5 DNA-binding transcription factor activity K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000129 190.0
YYD2_k127_152489_0 protein conserved in bacteria - - - 0.000002529 59.0
YYD2_k127_1534163_0 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 362.0
YYD2_k127_1534163_2 DNA-binding transcription factor activity - - - 0.000000000000000001129 96.0
YYD2_k127_1537604_0 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 6.974e-201 635.0
YYD2_k127_1546583_0 PFAM ribonuclease II K01147 - 3.1.13.1 2.598e-197 626.0
YYD2_k127_1546583_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 533.0
YYD2_k127_1546583_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 407.0
YYD2_k127_1546583_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 398.0
YYD2_k127_1546583_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 371.0
YYD2_k127_1546583_5 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 336.0
YYD2_k127_1546583_6 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA K07442 - 2.1.1.219,2.1.1.220 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007619 333.0
YYD2_k127_1546583_7 PFAM secretion protein HlyD family protein K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 332.0
YYD2_k127_1596882_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 5.937e-198 633.0
YYD2_k127_1596882_1 peptidase dimerisation domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009753 511.0
YYD2_k127_1596882_2 SMART phosphoesterase PHP domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 366.0
YYD2_k127_1596882_3 Protein of unknown function (DUF1385) K09153 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 329.0
YYD2_k127_1596882_4 Phosphodiester glycosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000002791 230.0
YYD2_k127_1596882_5 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000000000000000000000003255 213.0
YYD2_k127_1596882_6 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000001328 173.0
YYD2_k127_1596882_7 EamA-like transporter family - - - 0.000000000000000000000000000000005086 131.0
YYD2_k127_1596882_8 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000003498 106.0
YYD2_k127_1596882_9 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000004505 91.0
YYD2_k127_1620892_0 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000615 226.0
YYD2_k127_1620892_1 LURP-one-related - - - 0.000000000000000000000000000000000000000000000000000000004841 205.0
YYD2_k127_1620892_2 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000001259 173.0
YYD2_k127_1620892_3 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000005173 164.0
YYD2_k127_1620892_4 WD domain, G-beta repeat - - - 0.0000000003911 72.0
YYD2_k127_1620892_5 Transcriptional regulatory protein, C terminal - - - 0.0000006914 60.0
YYD2_k127_1622310_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1080.0
YYD2_k127_1622310_1 Nickel-dependent hydrogenase K14126 - 1.8.98.5 2.105e-228 716.0
YYD2_k127_1622310_10 Metal-sensitive transcriptional repressor K21600 - - 0.00000000000000000000000000000149 123.0
YYD2_k127_1622310_11 spore germination K03605 - - 0.0000000000000000000001619 104.0
YYD2_k127_1622310_12 to Labrenzia alexandrii DFL-11, acetyltransferase, GNAT family (NCBI ZP_05113985.1) - - - 0.00000000000000000009591 96.0
YYD2_k127_1622310_13 mercury ion transmembrane transporter activity K07213 - - 0.000000000000000002332 87.0
YYD2_k127_1622310_14 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000001316 87.0
YYD2_k127_1622310_2 Heterodisulfide reductase subunit A and related polyferredoxins K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 7.537e-197 626.0
YYD2_k127_1622310_3 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 389.0
YYD2_k127_1622310_4 TIGRFAM MazG family protein K02499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004232 352.0
YYD2_k127_1622310_5 TIGRFAM RarD protein, DMT superfamily transporter K05786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006705 336.0
YYD2_k127_1622310_6 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000004997 198.0
YYD2_k127_1622310_7 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000004437 194.0
YYD2_k127_1622310_8 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000009515 189.0
YYD2_k127_1622310_9 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000005256 138.0
YYD2_k127_1623829_0 Belongs to the formate--tetrahydrofolate ligase family K00288,K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.5.1.5,3.5.4.9,6.3.4.3 9.286e-299 929.0
YYD2_k127_1623829_1 PFAM PfkB domain protein K16328 - 2.7.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 310.0
YYD2_k127_1623829_2 pseudouridylate synthase activity K16329 GO:0001522,GO:0003674,GO:0003824,GO:0004730,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006139,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0016043,GO:0016070,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016787,GO:0016798,GO:0016829,GO:0016835,GO:0016836,GO:0019200,GO:0022607,GO:0030145,GO:0034641,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046835,GO:0046872,GO:0046914,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0090304,GO:1901360 4.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008783 306.0
YYD2_k127_1623829_3 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002931 254.0
YYD2_k127_1623829_4 PFAM aspartate glutamate uridylate kinase K06981 - 2.7.4.26 0.0000000000000000000000000000000000000000000000000000000000000000001624 238.0
YYD2_k127_1634421_0 Major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 477.0
YYD2_k127_1634421_1 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 437.0
YYD2_k127_1634421_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000002224 192.0
YYD2_k127_1653334_0 PFAM ABC transporter related K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 471.0
YYD2_k127_1653334_1 PFAM Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001593 256.0
YYD2_k127_1653334_2 - - - - 0.0000000000000000000000000000000000000001329 159.0
YYD2_k127_1653334_3 membrane-bound metal-dependent K07038 - - 0.000000152 61.0
YYD2_k127_1662193_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006425 509.0
YYD2_k127_1662193_1 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950,K13940 - 2.7.6.3,4.1.2.25 0.000000000000000000000000000000000000000000000136 173.0
YYD2_k127_1662193_2 Tetratricopeptide repeat - - - 0.0000008653 61.0
YYD2_k127_1669082_0 Serine carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006534 607.0
YYD2_k127_1669082_1 dehydrogenase, E1 component K11381 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 306.0
YYD2_k127_1669082_2 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 313.0
YYD2_k127_1669082_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 296.0
YYD2_k127_1669082_4 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001193 244.0
YYD2_k127_1669082_5 Putative inner membrane exporter, YdcZ K09936 - - 0.0000000000000000000000000000005501 133.0
YYD2_k127_1669082_7 - - - - 0.00000000000001022 82.0
YYD2_k127_1669082_8 sequence-specific DNA binding - - - 0.0000005489 63.0
YYD2_k127_1669082_9 Helix-turn-helix domain - - - 0.000003416 57.0
YYD2_k127_168129_0 PFAM short-chain dehydrogenase reductase SDR K15314 - - 0.0 2783.0
YYD2_k127_168129_1 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 2.888e-204 647.0
YYD2_k127_168129_2 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 467.0
YYD2_k127_168129_3 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 378.0
YYD2_k127_168129_4 biotin-requiring enzyme K01960 - 6.4.1.1 0.000000000001008 75.0
YYD2_k127_1714286_0 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000686 241.0
YYD2_k127_1714286_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000002402 227.0
YYD2_k127_1714286_2 carboxylic acid catabolic process - - - 0.000000000000000000000000000000000000000000000001204 179.0
YYD2_k127_1734305_0 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 426.0
YYD2_k127_1734305_1 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 423.0
YYD2_k127_1734305_2 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 406.0
YYD2_k127_1734305_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 341.0
YYD2_k127_1734305_4 PFAM Cytochrome C - - - 0.0000000000000000000000000000000000000000000000000000000000009605 221.0
YYD2_k127_1762159_0 Mur ligase middle domain K01932 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 390.0
YYD2_k127_1762159_1 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008124 279.0
YYD2_k127_1762159_2 Capsule biosynthesis CapC K22116 - - 0.00000000000000000000000000000000000000000000000004372 191.0
YYD2_k127_1762159_3 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.00000000000000000000000000000000677 129.0
YYD2_k127_1762159_4 - - - - 0.0000000000000001154 93.0
YYD2_k127_1762159_5 PAS fold - - - 0.00002564 52.0
YYD2_k127_1765107_0 Dehydrogenase E1 component K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 527.0
YYD2_k127_1765107_1 e3 binding domain K00658,K09699 - 2.3.1.168,2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 382.0
YYD2_k127_1765107_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family K13687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005261 281.0
YYD2_k127_1765107_3 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000464 205.0
YYD2_k127_1765107_4 PFAM Acyltransferase - - - 0.0000000000000000000000000000000000000000000001184 184.0
YYD2_k127_176527_0 histidine kinase A domain protein - - - 1.006e-273 881.0
YYD2_k127_176527_1 Binding-protein-dependent transport system inner membrane component K02063 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 518.0
YYD2_k127_176527_2 Bacterial extracellular solute-binding protein K02064 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 441.0
YYD2_k127_176527_3 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002305 284.0
YYD2_k127_176527_4 TOBE domain K02062,K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004399 270.0
YYD2_k127_176527_5 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000003964 173.0
YYD2_k127_176527_6 PFAM Thiamin pyrophosphokinase, catalytic region K00949 - 2.7.6.2 0.000000000000000000000000000000000000000000001571 172.0
YYD2_k127_178233_0 NAD synthase K01916 - 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 394.0
YYD2_k127_178233_1 major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 328.0
YYD2_k127_178233_2 PFAM zinc finger, SWIM domain protein - - - 0.0000000000000008464 78.0
YYD2_k127_179471_0 Spermine/spermidine synthase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000851 559.0
YYD2_k127_179471_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000000000512 211.0
YYD2_k127_179471_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000000002584 194.0
YYD2_k127_179471_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000001814 196.0
YYD2_k127_179471_4 PFAM NUDIX hydrolase - - - 0.0000000000000000000000000000000000000000000008384 173.0
YYD2_k127_179471_5 Protein of unknown function (DUF1461) - - - 0.00000000000000000000000000000000000007049 151.0
YYD2_k127_179471_7 Asp23 family, cell envelope-related function - - - 0.000000000000000000000000000001858 128.0
YYD2_k127_179471_8 protein secretion K03116,K03117 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.000000000159 68.0
YYD2_k127_1802453_0 Belongs to the 'phage' integrase family K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 422.0
YYD2_k127_1802453_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K00760,K04075,K15780 - 2.4.2.8,6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 327.0
YYD2_k127_1802453_2 PFAM Dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000002251 195.0
YYD2_k127_1802453_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000002937 188.0
YYD2_k127_1802453_4 CoA binding domain K06929 - - 0.0000000000000000000000000000002426 130.0
YYD2_k127_1805363_0 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 429.0
YYD2_k127_1805363_1 TIGRFAM phosphate binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 391.0
YYD2_k127_1805363_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 378.0
YYD2_k127_1805363_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015114,GO:0015318,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:0099133 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 373.0
YYD2_k127_1805363_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 333.0
YYD2_k127_1805363_5 Domain of unknown function (DUF4349) - - - 0.000000000000000000000000000000000779 144.0
YYD2_k127_1805363_6 TIGRFAM polymorphic outer membrane protein K21449 - - 0.0000000000002203 80.0
YYD2_k127_1805363_7 Phospholipase/Carboxylesterase - - - 0.00000000000786 75.0
YYD2_k127_1805363_8 PhoQ Sensor - - - 0.000000001936 69.0
YYD2_k127_1805363_9 Protein of unknown function (DUF664) - - - 0.00000008272 60.0
YYD2_k127_1835786_0 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008635 286.0
YYD2_k127_1835786_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000000007457 192.0
YYD2_k127_1835786_2 - - - - 0.000000000000000000000000000000000002364 141.0
YYD2_k127_1835786_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000003941 147.0
YYD2_k127_1835786_4 Protein of unknown function (DUF2089) - - - 0.0000000000000000000000000000000001188 136.0
YYD2_k127_1835786_6 Putative adhesin - - - 0.000000000004929 76.0
YYD2_k127_1835786_7 Putative adhesin - - - 0.00000003143 65.0
YYD2_k127_1835786_8 DegV family - - - 0.00000008406 56.0
YYD2_k127_1864643_0 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007851 288.0
YYD2_k127_1864643_1 Domain of unknown function (DUF1932) - - - 0.000000000000000000000000000000000000000000000000000000003339 209.0
YYD2_k127_1864643_2 YbaB/EbfC DNA-binding family K06187,K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000006324 136.0
YYD2_k127_1864643_3 - - - - 0.000000000008768 68.0
YYD2_k127_1864643_4 - - - - 0.000000008543 56.0
YYD2_k127_1899924_0 Castor and Pollux, part of voltage-gated ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 621.0
YYD2_k127_1899924_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 525.0
YYD2_k127_1899924_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008086 479.0
YYD2_k127_1899924_3 PFAM aminotransferase class V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 392.0
YYD2_k127_1899924_4 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 304.0
YYD2_k127_1899924_5 Protein of unknown function (DUF981) K08980 - - 0.0000000000000000000000000000000000000000000000000000000000000000001388 234.0
YYD2_k127_1901351_0 glutamine synthetase K01915 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0044464,GO:0050001,GO:0071944 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 534.0
YYD2_k127_1901351_1 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 301.0
YYD2_k127_1901351_2 Belongs to the peptidase S8 family K14647 - - 0.00000000000000000000000000000000000000000000000000000000000000000588 246.0
YYD2_k127_1901351_3 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000005206 207.0
YYD2_k127_1901351_4 Amidohydrolase family K01464,K01466 - 3.5.2.2,3.5.2.5 0.00000000000000000000000000000000000000000000000000003374 191.0
YYD2_k127_1901351_5 PFAM amine oxidase K00274 - 1.4.3.4 0.000000001734 58.0
YYD2_k127_1935369_0 PFAM Dak phosphatase K07030 - - 7.901e-209 662.0
YYD2_k127_1935369_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 3.922e-202 642.0
YYD2_k127_1935369_10 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000006099 139.0
YYD2_k127_1935369_11 - - - - 0.000000000000000000000000000002516 125.0
YYD2_k127_1935369_12 ribosomal protein L28 K02902 - - 0.000000000000000000002172 94.0
YYD2_k127_1935369_13 Asp23 family, cell envelope-related function - - - 0.00000000000000005934 85.0
YYD2_k127_1935369_14 Aminoglycoside 3-N-acetyltransferase K00662 - 2.3.1.81 0.00000000000007176 77.0
YYD2_k127_1935369_15 Pfam:DUF1049 - - - 0.00000509 53.0
YYD2_k127_1935369_2 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 434.0
YYD2_k127_1935369_3 SMART serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006476 330.0
YYD2_k127_1935369_4 Peptidase M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 326.0
YYD2_k127_1935369_5 Glycosyl transferase, family 2 K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 317.0
YYD2_k127_1935369_6 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000201 249.0
YYD2_k127_1935369_7 Cytidylyltransferase K07257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007588 250.0
YYD2_k127_1935369_8 PFAM diacylglycerol kinase catalytic region - - - 0.000000000000000000000000000000000000003242 164.0
YYD2_k127_1935369_9 membrane - - - 0.00000000000000000000000000000000000002444 152.0
YYD2_k127_1939858_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 475.0
YYD2_k127_1939858_1 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 327.0
YYD2_k127_1939858_2 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005456 276.0
YYD2_k127_1939858_3 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000009538 189.0
YYD2_k127_1939858_4 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000000758 132.0
YYD2_k127_1939858_5 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000004846 59.0
YYD2_k127_195145_0 peptidase M24 K01271 - 3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007103 404.0
YYD2_k127_195145_1 PFAM methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000519 261.0
YYD2_k127_195145_2 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002776 260.0
YYD2_k127_195145_3 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000002214 214.0
YYD2_k127_195145_4 Cytochrome b(N-terminal)/b6/petB - - - 0.0000000000000000000000000000000000000000000000001304 190.0
YYD2_k127_195145_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000007529 169.0
YYD2_k127_195145_6 acetyltransferase - - - 0.000000000000000000000000000000000002367 143.0
YYD2_k127_195145_7 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.00000000000000001184 87.0
YYD2_k127_195145_8 Cytochrome b(C-terminal)/b6/petD - - - 0.00001284 57.0
YYD2_k127_1962032_0 PFAM UDP-glucose GDP-mannose dehydrogenase K13015 - 1.1.1.136 2e-211 663.0
YYD2_k127_1962032_1 Short-chain dehydrogenase reductase SDR K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 422.0
YYD2_k127_1962032_10 Bacterial protein of unknown function (DUF951) - - - 0.000000000000000000009675 93.0
YYD2_k127_1962032_11 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000002551 87.0
YYD2_k127_1962032_12 PFAM polysaccharide biosynthesis protein - - - 0.000000000000001821 89.0
YYD2_k127_1962032_2 PFAM Monogalactosyldiacylglycerol synthase K03429 - 2.4.1.315 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 377.0
YYD2_k127_1962032_3 Phosphoribosyl transferase domain K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008501 281.0
YYD2_k127_1962032_4 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000001945 256.0
YYD2_k127_1962032_5 PFAM peptidase M22 glycoprotease K14742 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000305 250.0
YYD2_k127_1962032_6 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000000000000000000008129 183.0
YYD2_k127_1962032_7 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.00000000000000000000000000000000000001537 149.0
YYD2_k127_1962032_8 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K04517 - 1.3.1.12 0.0000000000000000000000000007266 125.0
YYD2_k127_1962032_9 GIY-YIG catalytic domain K07461 - - 0.0000000000000000000000143 104.0
YYD2_k127_1990530_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 4.49e-228 709.0
YYD2_k127_1990530_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 343.0
YYD2_k127_1990530_10 proteolysis K03665 - - 0.0000000000000000000003861 105.0
YYD2_k127_1990530_11 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000615 87.0
YYD2_k127_1990530_12 PFAM von Willebrand factor type A K07114 - - 0.00000000000001383 85.0
YYD2_k127_1990530_13 Psort location Cytoplasmic, score 8.96 K05799 - - 0.00000000008084 75.0
YYD2_k127_1990530_14 WXG100 protein secretion system (Wss), protein YukD - - - 0.000000000562 63.0
YYD2_k127_1990530_15 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000004566 59.0
YYD2_k127_1990530_2 PFAM UBA THIF-type NAD FAD binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 350.0
YYD2_k127_1990530_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 321.0
YYD2_k127_1990530_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000002676 237.0
YYD2_k127_1990530_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000000002867 175.0
YYD2_k127_1990530_6 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000001542 177.0
YYD2_k127_1990530_7 protein modification by small protein conjugation - - - 0.000000000000000000000000000000000009173 147.0
YYD2_k127_1990530_8 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000006474 121.0
YYD2_k127_1990530_9 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000000007248 106.0
YYD2_k127_2028384_0 nuclear chromosome segregation - - - 1.184e-255 813.0
YYD2_k127_2028384_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 486.0
YYD2_k127_2028384_2 PFAM VanW family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005918 352.0
YYD2_k127_2028384_3 PLD-like domain K17717 - 3.1.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000001594 264.0
YYD2_k127_2028384_4 Divergent PAP2 family K09775 - - 0.00000000000000000000000000000000000000000000006431 174.0
YYD2_k127_2028384_5 acetyltransferase K00621 - 2.3.1.4 0.00000000000000000000000000000000000006889 154.0
YYD2_k127_2028384_6 methyltransferase activity - - - 0.00000000000000000000000005223 120.0
YYD2_k127_2028384_8 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000189 50.0
YYD2_k127_2029009_0 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005162 498.0
YYD2_k127_2029009_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 400.0
YYD2_k127_2029009_2 Deoxynucleoside kinase K15518 - 2.7.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 306.0
YYD2_k127_2029009_3 transferase activity, transferring glycosyl groups K21011,K21012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 307.0
YYD2_k127_2029009_4 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000068 261.0
YYD2_k127_2029009_5 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001562 231.0
YYD2_k127_2029009_7 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000006443 167.0
YYD2_k127_2029009_8 PFAM regulatory protein GntR HTH K07979 - - 0.0000000000000000000000000000000000003086 144.0
YYD2_k127_203755_0 Peptidoglycan-binding LysM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 392.0
YYD2_k127_203755_1 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008165 394.0
YYD2_k127_203755_10 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000007989 133.0
YYD2_k127_203755_11 - - - - 0.000000000000000000000000002261 113.0
YYD2_k127_203755_12 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.00000000000000009053 87.0
YYD2_k127_203755_13 Belongs to the Orn Lys Arg decarboxylase class-II family K01586 - 4.1.1.20 0.0003881 44.0
YYD2_k127_203755_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 338.0
YYD2_k127_203755_3 PFAM glycosyl transferase family 3 K00756 - 2.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 320.0
YYD2_k127_203755_4 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002638 262.0
YYD2_k127_203755_5 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001488 258.0
YYD2_k127_203755_6 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000005853 239.0
YYD2_k127_203755_7 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000000000000000000004737 193.0
YYD2_k127_203755_8 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000000009821 162.0
YYD2_k127_203755_9 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000002811 143.0
YYD2_k127_208412_0 phenylalanyl-tRNA synthetase beta subunit K01890 - 6.1.1.20 1.166e-321 1004.0
YYD2_k127_208412_1 Homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009969 576.0
YYD2_k127_208412_10 self proteolysis - - - 0.00000000005399 76.0
YYD2_k127_208412_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 368.0
YYD2_k127_208412_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 341.0
YYD2_k127_208412_4 MBOAT, membrane-bound O-acyltransferase family K03739,K19294 - - 0.00000000000000000000000000000000000000000000000000001808 207.0
YYD2_k127_208412_5 self proteolysis - - - 0.000000000000000000000000001536 123.0
YYD2_k127_208412_6 PQQ-like domain - - - 0.0000000000000000000000002074 123.0
YYD2_k127_208412_7 Polysaccharide deacetylase - - - 0.0000000000000000002261 101.0
YYD2_k127_208412_9 - - - - 0.00000000000003115 77.0
YYD2_k127_2101088_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.614e-222 694.0
YYD2_k127_2101088_1 PFAM PfkB domain protein K00856 - 2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009648 428.0
YYD2_k127_2101088_2 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000002251 219.0
YYD2_k127_2101088_3 DNA methylase K00571 - 2.1.1.72 0.000000000004607 72.0
YYD2_k127_2111937_0 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005054 526.0
YYD2_k127_2111937_1 ABC transporter substrate-binding protein PnrA-like K02058,K07335 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 447.0
YYD2_k127_2141552_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.321 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 477.0
YYD2_k127_2141552_1 domain, Protein K15125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003095 301.0
YYD2_k127_2141552_2 Saccharopine dehydrogenase NADP binding domain - - - 0.0000000000000000003826 90.0
YYD2_k127_2141552_3 Saccharopine dehydrogenase NADP binding domain - - - 0.0000000005866 63.0
YYD2_k127_2155422_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 483.0
YYD2_k127_2155422_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 383.0
YYD2_k127_2155422_2 Ribosomal protein L11 methyltransferase K02687 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000005939 195.0
YYD2_k127_2155422_3 competence protein COMEC K02238 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000006103 121.0
YYD2_k127_2157010_0 TIGRFAM Hopanoid biosynthesis associated radical SAM protein HpnJ K04034 - 1.21.98.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 337.0
YYD2_k127_2157010_1 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000001122 187.0
YYD2_k127_2157010_2 Glycosyl transferase K00728 - 2.4.1.109 0.00001857 57.0
YYD2_k127_2193659_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1386.0
YYD2_k127_2193659_1 PFAM Transketolase central region K00162,K11381,K21417 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 547.0
YYD2_k127_2193659_10 RNase_H superfamily K06877 - - 0.000000000000000000000000000000000000000000000002385 179.0
YYD2_k127_2193659_11 Nitroreductase family - - - 0.00000000000000000000000000000000000000001257 164.0
YYD2_k127_2193659_12 PBS lyase HEAT domain protein repeat-containing protein - - - 0.000000000000000000000000000003867 133.0
YYD2_k127_2193659_13 phosphorelay signal transduction system - - - 0.00000000000000000000000000005663 123.0
YYD2_k127_2193659_14 Ribosomal L27 protein K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.00001929 46.0
YYD2_k127_2193659_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000834 458.0
YYD2_k127_2193659_3 PFAM Polynucleotide adenylyltransferase region K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 445.0
YYD2_k127_2193659_4 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005292 433.0
YYD2_k127_2193659_5 PFAM thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001143 276.0
YYD2_k127_2193659_6 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000005998 250.0
YYD2_k127_2193659_7 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000000000000000000000000000000007932 235.0
YYD2_k127_2193659_8 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000000000000000000000000000009947 190.0
YYD2_k127_2193659_9 Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) - - - 0.0000000000000000000000000000000000000000000000000001139 195.0
YYD2_k127_2239577_0 DNA helicase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 421.0
YYD2_k127_2239577_1 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000499 172.0
YYD2_k127_2248328_0 Belongs to the glycosyl hydrolase 3 family K01207,K05349 - 3.2.1.21,3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 501.0
YYD2_k127_2248328_1 cell envelope-related transcriptional attenuator - - - 0.0000000000000000000000000000000000000000000001891 185.0
YYD2_k127_2272301_0 metal-dependent phosphohydrolase, HD sub domain K07037 - - 2.662e-196 634.0
YYD2_k127_2272301_1 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000005792 149.0
YYD2_k127_2272301_2 - - - - 0.000000000000000000000004983 107.0
YYD2_k127_2272301_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000002091 73.0
YYD2_k127_2274221_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0 1296.0
YYD2_k127_2274221_1 Domain of unknown function DUF11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 406.0
YYD2_k127_2274221_2 Peptidase family M23 K08642 - - 0.000000000000000000000000000000000000000000000000001649 210.0
YYD2_k127_2274221_3 response regulator - - - 0.00000000000000000000000000004675 124.0
YYD2_k127_2274221_4 Animal haem peroxidase K19511 - 1.11.1.7 0.0000000000000000000000001359 125.0
YYD2_k127_2274221_5 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 0.000000004645 70.0
YYD2_k127_2281261_0 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034,K12370 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 420.0
YYD2_k127_2281261_1 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033,K12369 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 420.0
YYD2_k127_2281261_10 Putative regulatory protein - - - 0.000000000000000000000000000000000000000000005159 166.0
YYD2_k127_2281261_11 metallopeptidase activity K03592 - - 0.000000000000000000000000000000000000005188 163.0
YYD2_k127_2281261_12 YhhN family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000172 99.0
YYD2_k127_2281261_13 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000001857 90.0
YYD2_k127_2281261_2 Zn-dependent proteases and their inactivated homologs K03568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006448 406.0
YYD2_k127_2281261_3 Uncharacterized protein conserved in bacteria (DUF2179) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 370.0
YYD2_k127_2281261_4 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004648 277.0
YYD2_k127_2281261_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005018 267.0
YYD2_k127_2281261_6 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000001696 251.0
YYD2_k127_2281261_7 PFAM Rhomboid family protein K19225 - 3.4.21.105 0.0000000000000000000000000000000000000000000000000000000000000004871 229.0
YYD2_k127_2281261_8 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006 - 2.7.9.1 0.0000000000000000000000000000000000000000000000000002645 190.0
YYD2_k127_2281261_9 Protein of unknown function (DUF541) K09807 - - 0.0000000000000000000000000000000000000000000000002129 184.0
YYD2_k127_2282580_0 Methionine synthase B12-binding module cap domain protein K00548,K15023 - 2.1.1.13,2.1.1.258 0.0 1045.0
YYD2_k127_2282580_1 DNA methylase K00571,K00590 - 2.1.1.113,2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006201 431.0
YYD2_k127_2282580_10 PFAM DinB family protein - - - 0.0000000000000000000000009359 110.0
YYD2_k127_2282580_11 - - - - 0.0000000000000000654 86.0
YYD2_k127_2282580_12 Von Willebrand factor A domain containing 7 - - - 0.0000005681 59.0
YYD2_k127_2282580_2 Protein of unknown function (DUF554) K07150 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 301.0
YYD2_k127_2282580_3 Nitroreductase family K19285 - 1.5.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001922 279.0
YYD2_k127_2282580_4 PFAM Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000002782 209.0
YYD2_k127_2282580_5 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000004274 155.0
YYD2_k127_2282580_6 4-vinyl reductase, 4VR - - - 0.00000000000000000000000000000000000002762 152.0
YYD2_k127_2282580_7 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000581 117.0
YYD2_k127_2282580_8 SnoaL-like domain - - - 0.0000000000000000000000003362 112.0
YYD2_k127_2282580_9 Translation initiation factor SUI1 K03113 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0002190,GO:0002192,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0110017,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000003405 108.0
YYD2_k127_229039_0 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 335.0
YYD2_k127_229039_1 organic phosphonate transport K02044 - - 0.000000000000000000000000000000000000000000000001809 186.0
YYD2_k127_229039_2 organic phosphonate transport K02044 - - 0.00000000000007161 76.0
YYD2_k127_2306540_0 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006787 364.0
YYD2_k127_2306540_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006899 296.0
YYD2_k127_2306540_2 synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000004115 170.0
YYD2_k127_2306540_3 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.00000000000000000000000000000000000000000001715 169.0
YYD2_k127_2306540_4 rRNA (adenine-N6,N6-)-dimethyltransferase activity K00561,K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182,2.1.1.184 0.0000000000000000000000000000000000000003812 156.0
YYD2_k127_2310573_0 PFAM ABC transporter related K06158 - - 3.336e-201 645.0
YYD2_k127_2310573_1 - - - - 0.000000000002451 70.0
YYD2_k127_2328464_0 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000003352 195.0
YYD2_k127_2328464_1 Response regulator receiver - - - 0.000000000000000000000000000000000000000000001971 176.0
YYD2_k127_2328464_2 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000004713 166.0
YYD2_k127_2328464_3 PFAM Doubled CXXCH motif - - - 0.0000000000008036 79.0
YYD2_k127_2360779_0 PFAM ABC transporter related K02056 - 3.6.3.17 5.297e-217 687.0
YYD2_k127_2360779_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 543.0
YYD2_k127_2360779_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 428.0
YYD2_k127_2360779_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 370.0
YYD2_k127_2360779_4 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008258 347.0
YYD2_k127_2360779_5 PFAM basic membrane lipoprotein K07335 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 340.0
YYD2_k127_2360779_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 338.0
YYD2_k127_2360779_7 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 292.0
YYD2_k127_2360779_8 Ig-like domain from next to BRCA1 gene - - - 0.00000000000000000000000000000001043 141.0
YYD2_k127_2360779_9 Ig-like domain from next to BRCA1 gene - - - 0.0000000000000000000001047 109.0
YYD2_k127_2420637_0 Glycosyl transferase, family 2 K00786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 386.0
YYD2_k127_2420637_1 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000001331 217.0
YYD2_k127_2420637_2 -O-antigen - - - 0.000000000000000000000002251 118.0
YYD2_k127_2420637_3 - - - - 0.00000000000000003298 91.0
YYD2_k127_2420637_4 Chain length determinant protein - - - 0.0000002246 61.0
YYD2_k127_2421504_0 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 374.0
YYD2_k127_2421504_1 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 370.0
YYD2_k127_2421504_2 TIGRFAM small GTP-binding protein K06945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000503 299.0
YYD2_k127_2421504_3 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000003736 202.0
YYD2_k127_2421504_4 4-vinyl reductase, 4VR - - - 0.0000000000000000000000000000000000000000000000004492 183.0
YYD2_k127_2421504_5 Lysin motif - - - 0.000000000000000000000000000000000000005072 156.0
YYD2_k127_2439172_0 Peptidase M6, immune inhibitor A K09607 - - 0.0 1076.0
YYD2_k127_2439172_1 Formiminotransferase domain, N-terminal subdomain K00603,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 611.0
YYD2_k127_2439172_2 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001186 271.0
YYD2_k127_2439172_3 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000002394 260.0
YYD2_k127_2439172_4 - - - - 0.0000000000000000000000000000000000000000000000000000001916 203.0
YYD2_k127_2439172_5 peptidase - - - 0.0000000000000000002717 98.0
YYD2_k127_2439172_6 Cytochrome b5-like Heme Steroid binding domain - - - 0.000000000001633 70.0
YYD2_k127_2439364_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 587.0
YYD2_k127_2439364_1 Peptidase M16 domain protein K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 566.0
YYD2_k127_2439364_10 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007691 259.0
YYD2_k127_2439364_11 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001049 252.0
YYD2_k127_2439364_12 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000003476 219.0
YYD2_k127_2439364_13 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000003588 194.0
YYD2_k127_2439364_14 PFAM Acyltransferase - - - 0.0000000000000000000000000000000000000000001468 173.0
YYD2_k127_2439364_15 dihydroorotate dehydrogenase activity K17828 - 1.3.1.14 0.000000000000000000000000000000000000000006367 164.0
YYD2_k127_2439364_16 - - - - 0.00000000000000000000000000000000000007799 153.0
YYD2_k127_2439364_17 Acyltransferase family - - - 0.0000000000000000000000000000000000004878 154.0
YYD2_k127_2439364_18 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000003592 136.0
YYD2_k127_2439364_19 Regulatory protein, FmdB family - - - 0.00000000000000000000002285 102.0
YYD2_k127_2439364_2 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 530.0
YYD2_k127_2439364_22 Rdx family K07401 - - 0.0000000000004479 70.0
YYD2_k127_2439364_23 PFAM Bacterial protein of - - - 0.0003013 51.0
YYD2_k127_2439364_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 479.0
YYD2_k127_2439364_4 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 450.0
YYD2_k127_2439364_5 TIGRFAM fructose-1,6-bisphosphatase, class II K02446 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 440.0
YYD2_k127_2439364_6 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 371.0
YYD2_k127_2439364_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 365.0
YYD2_k127_2439364_8 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 344.0
YYD2_k127_2439364_9 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 339.0
YYD2_k127_2455814_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 414.0
YYD2_k127_2455814_1 peptidyl-tyrosine sulfation - - - 0.0000000000000004081 91.0
YYD2_k127_2455814_2 Putative peptidoglycan binding domain - - - 0.000001545 57.0
YYD2_k127_2474255_0 FAD dependent oxidoreductase central domain - - - 2.065e-273 863.0
YYD2_k127_2474255_1 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 460.0
YYD2_k127_2474255_2 Aminotransferase class I and II K00013,K00817 - 1.1.1.23,2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 461.0
YYD2_k127_2474255_3 Domain in cystathionine beta-synthase and other proteins. K14446 - 1.3.1.85 0.000000000000000002822 94.0
YYD2_k127_2502865_0 Short-chain dehydrogenase reductase SDR - - - 1.821e-246 776.0
YYD2_k127_2502865_1 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 473.0
YYD2_k127_2502865_2 short-chain dehydrogenase reductase SDR K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 293.0
YYD2_k127_2502865_3 PFAM Methicillin resistance protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001722 250.0
YYD2_k127_2502865_4 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000004642 119.0
YYD2_k127_2503444_0 acyl-CoA dehydrogenase - - - 5.161e-283 878.0
YYD2_k127_2503444_1 Belongs to the thiolase family K00626 - 2.3.1.9 4.27e-221 693.0
YYD2_k127_2503444_2 nitrite transmembrane transporter activity K02532 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 384.0
YYD2_k127_2503444_3 ErfK ybiS ycfS ynhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004681 252.0
YYD2_k127_2503444_4 - - - - 0.00000000000000000000000000000000000000000000000000000000006818 210.0
YYD2_k127_2503444_5 - - - - 0.0000000000000000000000000000000000000000000000000002233 188.0
YYD2_k127_2503444_6 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000000000000000000000000000000000000000007661 188.0
YYD2_k127_2503444_7 Dual specificity phosphatase, catalytic domain - - - 0.000000005184 63.0
YYD2_k127_2503444_8 self proteolysis - - - 0.000002179 59.0
YYD2_k127_2503444_9 - - - - 0.0002451 48.0
YYD2_k127_2504923_1 slime layer polysaccharide biosynthetic process K05946 - 2.4.1.187 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 308.0
YYD2_k127_2504923_2 Leucyl aminopeptidase (Aminopeptidase T) K19689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 300.0
YYD2_k127_2504923_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002722 286.0
YYD2_k127_2504923_4 lysyltransferase activity K07027 - - 0.0000000000000000001097 100.0
YYD2_k127_2504923_5 Hypothetical methyltransferase - - - 0.0000006753 60.0
YYD2_k127_2504923_6 Carbonic anhydrase K01673 - 4.2.1.1 0.0003166 44.0
YYD2_k127_2508988_0 PFAM NADH flavin oxidoreductase NADH oxidase K00317 - 1.5.8.1,1.5.8.2 6.371e-253 787.0
YYD2_k127_2508988_1 COG0520 Selenocysteine lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 526.0
YYD2_k127_2508988_2 PFAM UbiA prenyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 378.0
YYD2_k127_2508988_3 Ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586 304.0
YYD2_k127_2508988_4 TIGRFAM mevalonate kinase K00869 - 2.7.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000066 295.0
YYD2_k127_2508988_5 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.000000000000000000000000000000000000000000000000000000000000003073 220.0
YYD2_k127_2508988_6 Uncharacterized conserved protein (DUF2196) - - - 0.00000000000000000000000007349 109.0
YYD2_k127_2508988_7 - - - - 0.00001286 54.0
YYD2_k127_2508988_8 sh3 domain protein - - - 0.00002304 55.0
YYD2_k127_2513939_0 teichoic acid transport K01990,K09689,K09691 - 3.6.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004451 581.0
YYD2_k127_2513939_1 ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000007845 213.0
YYD2_k127_2513939_2 lipid-A-disaccharide synthase activity K00748 - 2.4.1.182 0.0000000000000000004237 91.0
YYD2_k127_2567039_0 Alpha-Mannosidase K01191,K15524 GO:0003674,GO:0003824,GO:0004553,GO:0004559,GO:0005975,GO:0005996,GO:0006013,GO:0006464,GO:0006517,GO:0006807,GO:0008150,GO:0008152,GO:0009100,GO:0009987,GO:0015923,GO:0016787,GO:0016798,GO:0019318,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0071704,GO:1901135,GO:1901564 3.2.1.170,3.2.1.24 1.028e-281 883.0
YYD2_k127_2567039_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000007396 146.0
YYD2_k127_2598254_0 Isochorismatase family K09020 - 3.5.1.110 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005079 286.0
YYD2_k127_2598254_1 ligase activity K01469 - 3.5.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002654 276.0
YYD2_k127_2598254_2 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000001529 89.0
YYD2_k127_2601711_0 Belongs to the carbamoyltransferase HypF family K04656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 402.0
YYD2_k127_2601711_1 Hydrogenase accessory protein HypB K03189,K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 296.0
YYD2_k127_2601711_2 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000000000018 129.0
YYD2_k127_2623303_0 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000001042 174.0
YYD2_k127_2623303_1 PFAM phospholipid glycerol acyltransferase - - - 0.000000000000000000000000000000000000000000329 169.0
YYD2_k127_2623303_2 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000004582 96.0
YYD2_k127_2623303_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00001817 50.0
YYD2_k127_2626185_0 Heparinase II/III N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008704 532.0
YYD2_k127_2626185_1 PFAM Glycosyl transferase family 4 K13007 - - 0.000007034 51.0
YYD2_k127_2638253_0 SMART ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 446.0
YYD2_k127_2638253_1 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000001196 223.0
YYD2_k127_2638253_2 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000007978 130.0
YYD2_k127_2656168_0 PFAM ABC transporter transmembrane region - - - 1.202e-210 670.0
YYD2_k127_2656168_1 PFAM ABC transporter transmembrane region K06147 - - 0.000000000000000000000303 96.0
YYD2_k127_2674383_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 369.0
YYD2_k127_2674383_1 Saccharopine dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003845 349.0
YYD2_k127_2674383_2 Putative esterase K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 330.0
YYD2_k127_2674383_3 hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000004274 199.0
YYD2_k127_2674383_4 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000006476 192.0
YYD2_k127_2688816_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.701e-242 756.0
YYD2_k127_2688816_1 short-chain dehydrogenase reductase SDR K12454 - 5.1.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 440.0
YYD2_k127_2688816_2 PFAM Rhomboid family protein - - - 0.000000000000000000000000000000000000000000000000000000000000009594 223.0
YYD2_k127_2688816_3 lysyltransferase activity K07027 - - 0.0000000000000000000000000001411 128.0
YYD2_k127_2691642_0 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 384.0
YYD2_k127_2691642_1 polysaccharide biosynthetic process K16694 - - 0.00000003692 57.0
YYD2_k127_26944_0 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 536.0
YYD2_k127_26944_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 389.0
YYD2_k127_26944_2 AzlC protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001397 243.0
YYD2_k127_26944_3 Acyl-transferase - - - 0.00000000000000000000000000000003934 134.0
YYD2_k127_26944_4 branched-chain amino acid - - - 0.0000000000000000000000002987 108.0
YYD2_k127_26944_5 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00176 - 1.2.7.3 0.00000000000000006889 81.0
YYD2_k127_2699875_0 Carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 452.0
YYD2_k127_2699875_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 297.0
YYD2_k127_2699875_2 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000003564 203.0
YYD2_k127_2699875_3 - - - - 0.00000000000000000000000000000000000000000002328 169.0
YYD2_k127_2699875_5 - - - - 0.0000000000000000000003099 102.0
YYD2_k127_2699875_6 Leucine-rich repeat (LRR) protein - - - 0.00000000000006401 86.0
YYD2_k127_2699875_7 - - - - 0.00000003744 67.0
YYD2_k127_2717563_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 546.0
YYD2_k127_2717563_1 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 415.0
YYD2_k127_2717563_2 polysaccharide deacetylase K01406 - 3.4.24.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 336.0
YYD2_k127_2717563_3 DNA methylase - - - 0.0000000000000000000000000000000000000000000000000000000000003963 220.0
YYD2_k127_2717563_4 LysM domain - - - 0.00000000000000000000000000000000000000000000000000007122 197.0
YYD2_k127_2717563_5 Myo-inositol-1-phosphate synthase, GAPDH domain protein K01858 - 5.5.1.4 0.00000000000000000000000000000000000000000007026 160.0
YYD2_k127_2717563_6 - - - - 0.00000000000000000000000000000000005842 143.0
YYD2_k127_2717563_7 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.0000000000000000000000000000000006617 137.0
YYD2_k127_2721909_0 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000000000003786 199.0
YYD2_k127_2721909_1 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.000000000000000000000000001232 116.0
YYD2_k127_2729309_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 7.215e-235 749.0
YYD2_k127_2729309_2 Methyltransferase domain - - - 0.00000000000000000001041 102.0
YYD2_k127_2784610_0 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007425 466.0
YYD2_k127_2784610_1 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 362.0
YYD2_k127_2784610_2 phospho-N-acetylmuramoyl-pentapeptide-transferase activity K02851,K13007 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000236 196.0
YYD2_k127_2784610_3 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K03790 - 2.3.1.128 0.0000000000000000000000000000000000000002474 156.0
YYD2_k127_2784610_4 Heparinase II/III N-terminus - - - 0.0003108 48.0
YYD2_k127_2785138_0 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 297.0
YYD2_k127_2785138_1 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000008705 214.0
YYD2_k127_2787993_0 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 385.0
YYD2_k127_2787993_1 formate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 320.0
YYD2_k127_2787993_2 Cytochrome c3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003964 280.0
YYD2_k127_2787993_3 formate dehydrogenase - - - 0.000000000000000000000000000000000000000005336 165.0
YYD2_k127_2791774_0 penicillin amidase K01434 - 3.5.1.11 6.789e-290 914.0
YYD2_k127_2791774_1 Pyridoxal-phosphate dependent enzyme K17950 - 4.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007666 433.0
YYD2_k127_2791774_2 PFAM Methicillin resistance protein - - - 0.0000000000000000000000000000000000000000000000000000000002857 205.0
YYD2_k127_2791774_3 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000342 172.0
YYD2_k127_2791774_4 Zinc ribbon domain - - - 0.000000001887 62.0
YYD2_k127_2798352_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 480.0
YYD2_k127_2798352_1 Predicted membrane protein (DUF2085) - - - 0.000000000000000000000000000000000000000000000000000000000002288 218.0
YYD2_k127_2798352_2 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000000000000000000000939 196.0
YYD2_k127_2798352_3 Protein of unknown function (DUF402) K07586 - - 0.00000000000000000000000000000002449 132.0
YYD2_k127_2798352_4 TOBE domain K02062,K11072 - 3.6.3.31 0.000000003583 63.0
YYD2_k127_2813278_0 malic protein domain protein K00027,K00029 - 1.1.1.38,1.1.1.40 1.292e-304 951.0
YYD2_k127_2813278_1 SMART AAA ATPase - - - 1.036e-213 670.0
YYD2_k127_2813278_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008156 567.0
YYD2_k127_2813278_3 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 323.0
YYD2_k127_2813278_4 PFAM Haloacid dehalogenase domain protein hydrolase K02566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009865 301.0
YYD2_k127_2813278_5 phosphoesterase RecJ domain protein - - - 0.0000000000000006226 83.0
YYD2_k127_2813278_6 defense response to other organism K02395,K19220,K19223 GO:0005575,GO:0005576 - 0.0000002906 62.0
YYD2_k127_282503_0 Selenocysteine-specific translation elongation factor K03833 - - 4.665e-235 742.0
YYD2_k127_282503_1 Proton-conducting membrane transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 304.0
YYD2_k127_282503_2 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008996 272.0
YYD2_k127_282503_4 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.00000000000000000000000000000000000000000000002358 178.0
YYD2_k127_282503_6 Transcriptional Coactivator p15 (PC4) - - - 0.000000000000000002144 85.0
YYD2_k127_2838872_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 435.0
YYD2_k127_2838872_1 COG2211 Na melibiose symporter and related K03292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 326.0
YYD2_k127_2838872_2 RNase_H superfamily K07502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003126 284.0
YYD2_k127_2838872_3 Sulfotransferase domain - - - 0.00000000000000000000000000000000005037 145.0
YYD2_k127_2838872_4 Sulfotransferase domain - - - 0.00000000000000000000000000000004201 136.0
YYD2_k127_2838872_5 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.000000000000000000000000005997 111.0
YYD2_k127_2860955_0 ABC transporter, transmembrane region K06147 - - 7.593e-207 657.0
YYD2_k127_2860955_1 PFAM glycoside hydrolase, family 1 K05350 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000001412 199.0
YYD2_k127_2860955_2 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000003871 86.0
YYD2_k127_2864288_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 318.0
YYD2_k127_2864288_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000005528 225.0
YYD2_k127_2866082_0 COGs COG3533 conserved K09955 - - 3.222e-261 818.0
YYD2_k127_2866082_1 beta-galactosidase activity K01190,K17624 - 3.2.1.23,3.2.1.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 549.0
YYD2_k127_2866082_2 Belongs to the glycosyl hydrolase 2 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009756 471.0
YYD2_k127_2866082_3 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 370.0
YYD2_k127_2866082_4 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000000000000000004677 155.0
YYD2_k127_2866082_5 Transposase IS200 like - - - 0.00000000000000000000000000000007954 130.0
YYD2_k127_2866082_6 WD40-like Beta Propeller Repeat K03641 - - 0.000000000007622 77.0
YYD2_k127_287991_0 peptidase M42 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008005 309.0
YYD2_k127_287991_1 peptidase M42 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000009242 238.0
YYD2_k127_287991_2 Belongs to the peptidase S51 family - - - 0.000000000000000000000000000000000000002351 155.0
YYD2_k127_287991_3 maltose binding K02027,K15770 - - 0.00000000000000000000000000000000000239 153.0
YYD2_k127_287991_4 Protein of unknown function (DUF456) K09793 - - 0.000000000002524 70.0
YYD2_k127_2886589_0 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004307 284.0
YYD2_k127_2886589_1 PFAM glycosyl transferase, family 51 - - - 0.000000000000000000000000000000000000000001202 169.0
YYD2_k127_2916723_0 nitronate monooxygenase activity - - - 9.766e-206 654.0
YYD2_k127_2916723_1 4'-phosphopantetheinyl transferase superfamily K06133 - - 0.000000000000000000000000000000000006706 144.0
YYD2_k127_2931032_0 Heat shock 70 kDa protein K04043 - - 9.47e-297 921.0
YYD2_k127_2931032_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 1.203e-227 719.0
YYD2_k127_2931032_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 464.0
YYD2_k127_2931032_3 AAA domain K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006997 321.0
YYD2_k127_2931032_4 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000001608 238.0
YYD2_k127_2931032_5 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.00000000000000000000000000000000000000000000000000002076 195.0
YYD2_k127_2931032_6 GAF domain - - - 0.000000000000000000000000000000000000000000000001954 189.0
YYD2_k127_2931032_8 Peptidase_C39 like family - - - 0.000001604 55.0
YYD2_k127_2932389_0 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000428 306.0
YYD2_k127_2932389_1 Peptidase family C25 - - - 0.00000000002453 79.0
YYD2_k127_2932389_2 regulator of chromosome condensation, RCC1 - - - 0.00000007026 68.0
YYD2_k127_2960176_0 PFAM peptidase M48 Ste24p K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000855 320.0
YYD2_k127_2960176_1 Caulimovirus viroplasmin K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000001897 217.0
YYD2_k127_2960176_2 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000007227 189.0
YYD2_k127_2961569_0 6-phosphogluconolactonase activity - - - 0.0000000000000000000001595 113.0
YYD2_k127_2991250_0 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 480.0
YYD2_k127_2991250_1 transmembrane transport K16053 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 327.0
YYD2_k127_2991250_2 PFAM Rieske 2Fe-2S K02636 - 1.10.9.1 0.00000000000000000005261 98.0
YYD2_k127_2992996_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.127e-288 908.0
YYD2_k127_2992996_1 Magnesium transport protein CorA K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 344.0
YYD2_k127_2992996_2 SMP-30/Gluconolaconase/LRE-like region K14274 GO:0003674,GO:0003824,GO:0004341,GO:0005488,GO:0005509,GO:0005575,GO:0005576,GO:0005975,GO:0005996,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016051,GO:0016053,GO:0016787,GO:0016788,GO:0019752,GO:0019852,GO:0019853,GO:0042364,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046364,GO:0046394,GO:0046872,GO:0051186,GO:0051188,GO:0052689,GO:0071704,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008888 291.0
YYD2_k127_2992996_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000001369 235.0
YYD2_k127_2992996_4 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000221 205.0
YYD2_k127_2992996_5 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) - - - 0.000000000000000000000000000000000000000000000000002018 186.0
YYD2_k127_2992996_6 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.00000000000000000000000000000000000000000000003174 179.0
YYD2_k127_2992996_7 Acyltransferase family K21005 - - 0.0000000000000000000000000000000000000000001382 173.0
YYD2_k127_2992996_8 histone H2A K63-linked ubiquitination - - - 0.000000000000000000000000006419 117.0
YYD2_k127_2992996_9 FAD linked oxidase domain protein K00103,K16653 GO:0000271,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010383,GO:0016020,GO:0016051,GO:0031221,GO:0033692,GO:0034637,GO:0034645,GO:0035884,GO:0040007,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0070589,GO:0070592,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901576 1.1.3.8,1.1.98.3 0.00000000000001078 74.0
YYD2_k127_3000088_0 Cys/Met metabolism PLP-dependent enzyme K01739 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009092,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0019279,GO:0019343,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071265,GO:0071266,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 464.0
YYD2_k127_3000088_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000001815 150.0
YYD2_k127_3000088_2 Protein kinase domain - - - 0.0000000000000000000000000001844 126.0
YYD2_k127_3000088_3 - - - - 0.0000000000003311 79.0
YYD2_k127_3000088_5 - - - - 0.000002867 57.0
YYD2_k127_3001894_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 554.0
YYD2_k127_3001894_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 358.0
YYD2_k127_3001894_2 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000001041 236.0
YYD2_k127_3001894_3 organic phosphonate transmembrane transporter activity K02042 - - 0.00000000000000000000000000000000000000000000000000000000000000007292 236.0
YYD2_k127_3001894_4 ABC transporter (Permease) K02042 - - 0.0000000000000000000000000000000000000000000000000000000000000002208 226.0
YYD2_k127_3036184_0 COGs COG4591 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 508.0
YYD2_k127_3036184_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 326.0
YYD2_k127_3036184_2 PFAM Glycosyl hydrolase family 1 K05350 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 314.0
YYD2_k127_3036184_3 ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 316.0
YYD2_k127_3036184_4 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009036 298.0
YYD2_k127_3036184_5 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005277 272.0
YYD2_k127_3036184_6 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000001668 127.0
YYD2_k127_3036184_7 peroxiredoxin activity - - - 0.00000000000000000000000172 111.0
YYD2_k127_3064211_0 Protein kinase domain K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000007638 177.0
YYD2_k127_3064211_1 - - - - 0.0000000000000000000000005872 119.0
YYD2_k127_3064211_2 Bacterial cellulose synthase subunit K20541 - - 0.00000000000000000000003848 116.0
YYD2_k127_3064211_3 Acetyltransferase (GNAT) domain - - - 0.000000004119 58.0
YYD2_k127_30701_0 Amino acid permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008303 253.0
YYD2_k127_30701_1 Cadherin repeats. - - - 0.00000000000000000000000000000000000000000000000000000000000971 225.0
YYD2_k127_30701_2 Cupin superfamily (DUF985) K09705 - - 0.0000000000000000000000000000000000000000000000000000002909 198.0
YYD2_k127_30701_3 Iron-storage protein K02217 - 1.16.3.2 0.00000000000000000000000000000000000000000000000000002319 192.0
YYD2_k127_30701_5 Belongs to the peptidase S26 family - - - 0.00000000000006668 80.0
YYD2_k127_30701_6 Phosphatidylserine decarboxylase - - - 0.0008033 50.0
YYD2_k127_3083371_0 DNA polymerase alpha chain like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 299.0
YYD2_k127_3083371_1 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000163 238.0
YYD2_k127_3083371_2 amine oxidase - - - 0.00000000000000000000000000000000005523 144.0
YYD2_k127_3085230_0 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 560.0
YYD2_k127_3085230_1 Apoptosis-inducing factor, mitochondrion-associated, C-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 478.0
YYD2_k127_3085230_2 periplasmic binding protein LacI transcriptional regulator K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003651 282.0
YYD2_k127_3085230_3 solute-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000003576 241.0
YYD2_k127_3090932_0 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 409.0
YYD2_k127_3090932_1 4Fe-4S double cluster binding domain K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009291 366.0
YYD2_k127_3090932_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000008323 256.0
YYD2_k127_3090932_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000007437 211.0
YYD2_k127_3090932_4 Ig-like domain from next to BRCA1 gene - - - 0.000000000000000000002094 102.0
YYD2_k127_3092121_0 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 412.0
YYD2_k127_3092121_1 PFAM deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006463 304.0
YYD2_k127_3092121_2 PFAM DSBA oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000002202 197.0
YYD2_k127_3092121_3 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.00000000000000000000000000000000000000000000000001373 188.0
YYD2_k127_3092121_4 Diguanylate cyclase - - - 0.00000000000000000000000000000000000002152 149.0
YYD2_k127_3092121_5 cell wall surface anchor family protein - - - 0.0000000000000000000007453 112.0
YYD2_k127_3092121_6 Lamin Tail Domain - - - 0.0000000000001143 85.0
YYD2_k127_3092121_7 - - - - 0.0000000000001182 74.0
YYD2_k127_3120004_0 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 341.0
YYD2_k127_3120004_1 Heat shock protein DnaJ domain protein K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007717 322.0
YYD2_k127_3120004_2 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000004591 89.0
YYD2_k127_3151209_0 YibE/F-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001688 256.0
YYD2_k127_3151209_1 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000008061 226.0
YYD2_k127_3151209_2 PFAM sigma-70 region 2 domain protein K03088 - - 0.000000000000000000000000000000000000000000000000004778 187.0
YYD2_k127_3151209_3 Polymer-forming cytoskeletal - - - 0.000000000000000000000002207 117.0
YYD2_k127_3172156_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 5.749e-214 668.0
YYD2_k127_3172156_1 Pyridine nucleotide-disulphide oxidoreductase dimerisation region K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 562.0
YYD2_k127_3172156_2 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 454.0
YYD2_k127_3172156_3 PFAM Transketolase central region K00162,K11381,K21417 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 407.0
YYD2_k127_3172156_4 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005103 406.0
YYD2_k127_3172156_5 Phosphopantetheine attachment site - - - 0.000000000000005392 77.0
YYD2_k127_3192163_0 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000000000000000000004302 210.0
YYD2_k127_3192163_1 Extracellular nuclease - - - 0.00000000000000000000004386 111.0
YYD2_k127_3192163_2 HsdM N-terminal domain K03427 - 2.1.1.72 0.000000000000009809 74.0
YYD2_k127_3195605_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 349.0
YYD2_k127_3195605_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000004911 194.0
YYD2_k127_3195605_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000004885 66.0
YYD2_k127_3195605_3 gas vesicle protein - - - 0.0003547 46.0
YYD2_k127_3213857_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009644 611.0
YYD2_k127_3213857_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 549.0
YYD2_k127_3213857_11 Cell division protein FtsQ K03589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 - 0.000000002022 68.0
YYD2_k127_3213857_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 539.0
YYD2_k127_3213857_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 524.0
YYD2_k127_3213857_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005771 496.0
YYD2_k127_3213857_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 463.0
YYD2_k127_3213857_6 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 458.0
YYD2_k127_3213857_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 414.0
YYD2_k127_3213857_8 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 349.0
YYD2_k127_3213857_9 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000001017 222.0
YYD2_k127_3237407_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 407.0
YYD2_k127_3237407_1 Belongs to the MEMO1 family K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 306.0
YYD2_k127_3237407_2 sigma-70 region 2 domain protein K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000333 244.0
YYD2_k127_3237407_3 Nudix hydrolase - - - 0.0000000000000000000000000000000000000000000000000000003103 197.0
YYD2_k127_3237407_4 Radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000005274 112.0
YYD2_k127_3237407_5 AntiSigma factor - - - 0.000000000001084 76.0
YYD2_k127_3238978_0 Parallel beta-helix repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 378.0
YYD2_k127_3238978_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.0000000000000000000000003646 115.0
YYD2_k127_3255430_0 Required for chromosome condensation and partitioning K03529 - - 7e-323 1026.0
YYD2_k127_3255430_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 3.449e-315 979.0
YYD2_k127_3255430_2 ROK family K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 362.0
YYD2_k127_3255430_3 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008424 299.0
YYD2_k127_3255430_4 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000003529 257.0
YYD2_k127_3255430_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000000001147 114.0
YYD2_k127_3255430_6 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000006285 93.0
YYD2_k127_3259385_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 443.0
YYD2_k127_3259385_1 PFAM Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K00335,K05587 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 440.0
YYD2_k127_3259385_2 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 361.0
YYD2_k127_3259385_3 Pentapeptide repeats (9 copies) - - - 0.0000000000000000000108 98.0
YYD2_k127_3300113_0 L-lactate permease K03303 - - 2.969e-199 632.0
YYD2_k127_3300113_1 Oligopeptidase F K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 482.0
YYD2_k127_3300113_2 DNA-binding transcription factor activity K03892 - - 0.000000000000000000000000001725 114.0
YYD2_k127_3302579_0 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 288.0
YYD2_k127_3302579_1 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000002141 207.0
YYD2_k127_3302579_2 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000007564 156.0
YYD2_k127_3302579_3 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000000000000164 126.0
YYD2_k127_3317398_0 Diguanylate cyclase K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 618.0
YYD2_k127_3317398_1 fad dependent oxidoreductase K07222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004218 454.0
YYD2_k127_3317398_2 ABC-type multidrug transport system ATPase K01990,K16907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 295.0
YYD2_k127_3317398_3 Putative ATP-binding cassette K01992 - - 0.000000000000000000000000000000000000000000000000000000000003677 232.0
YYD2_k127_3317398_4 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K07516 - 1.1.1.35 0.00000000000000000000000000000000000000000000000000000000003048 215.0
YYD2_k127_3317398_5 Beta-lactamase class C and other penicillin binding - - - 0.00000000000000000000000000000000000000000000000000000000195 215.0
YYD2_k127_3317398_6 - - - - 0.000000000000000000000000000000000000000006429 161.0
YYD2_k127_3317398_7 Chagasin family peptidase inhibitor I42 K14475 - - 0.000000000000005022 80.0
YYD2_k127_3338160_0 aminopeptidase N - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 450.0
YYD2_k127_3338160_1 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006342 391.0
YYD2_k127_3338160_2 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 376.0
YYD2_k127_3338160_3 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 338.0
YYD2_k127_3338160_4 phosphatidylinositol kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001161 264.0
YYD2_k127_3338160_5 ferrous iron binding K06990,K09141 - - 0.0000000000000000000000000000000000000000000000000000000000000007857 224.0
YYD2_k127_3338160_6 PFAM flavin reductase - - - 0.0000000000000000000000000006517 120.0
YYD2_k127_3338160_7 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain K21023 - 2.7.7.65 0.0000007902 62.0
YYD2_k127_3338160_8 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.00002978 52.0
YYD2_k127_3383519_0 PFAM binding-protein-dependent transport systems inner membrane component K15771 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 366.0
YYD2_k127_3383519_1 PFAM extracellular solute-binding protein family 1 K15770 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 318.0
YYD2_k127_3383519_2 PFAM binding-protein-dependent transport systems inner membrane component K15772 - - 0.0000000000000000000000000009093 119.0
YYD2_k127_3395614_0 alcohol dehydrogenase K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 433.0
YYD2_k127_3395614_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 312.0
YYD2_k127_3395614_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000008503 237.0
YYD2_k127_3395614_3 - - - - 0.0000000000000000000000000000000000000000000000000000000009659 209.0
YYD2_k127_3395614_4 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000000000000000000000000005168 198.0
YYD2_k127_3395614_5 - - - - 0.000000000000000000000000000000000000009889 160.0
YYD2_k127_3395614_7 COG0457 FOG TPR repeat - - - 0.0006232 49.0
YYD2_k127_3403813_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 1.852e-246 773.0
YYD2_k127_3403813_1 Amidohydrolase family - - - 8.407e-221 692.0
YYD2_k127_3403813_10 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000002517 199.0
YYD2_k127_3403813_11 Major Facilitator - - - 0.0000000000000000000000000000000000000000000000001763 192.0
YYD2_k127_3403813_12 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.00001017 47.0
YYD2_k127_3403813_13 Involved in the tonB-independent uptake of proteins - - - 0.0007585 46.0
YYD2_k127_3403813_2 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 558.0
YYD2_k127_3403813_3 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 472.0
YYD2_k127_3403813_4 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255,K01259 GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0097718,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1,3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 386.0
YYD2_k127_3403813_5 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 336.0
YYD2_k127_3403813_6 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 316.0
YYD2_k127_3403813_7 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 - 4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 299.0
YYD2_k127_3403813_8 UTRA K03710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008888 252.0
YYD2_k127_3403813_9 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000002466 198.0
YYD2_k127_3426091_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2026.0
YYD2_k127_3426091_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1081.0
YYD2_k127_3426091_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001436 246.0
YYD2_k127_3426091_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000006789 207.0
YYD2_k127_3426091_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000001568 66.0
YYD2_k127_3427038_0 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.00000000000000000000000000000000000000000000000000000000002298 209.0
YYD2_k127_3427038_1 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000004548 214.0
YYD2_k127_3427038_2 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000000000000000000000000000000000202 176.0
YYD2_k127_3431445_0 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000001502 172.0
YYD2_k127_3431445_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000004102 166.0
YYD2_k127_3431445_2 Aminoacyl-tRNA editing domain K19055 - - 0.000000000000000000000000000000000000000000006376 168.0
YYD2_k127_3431445_3 Ig-like domain from next to BRCA1 gene - - - 0.000000000000000001205 97.0
YYD2_k127_3431445_4 SCP-like extracellular protein. Source PGD - - - 0.00000000000000003157 93.0
YYD2_k127_3445167_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 534.0
YYD2_k127_3445167_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007102 496.0
YYD2_k127_3445167_10 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000002261 158.0
YYD2_k127_3445167_11 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000001374 148.0
YYD2_k127_3445167_12 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000006785 141.0
YYD2_k127_3445167_13 Ribosomal protein L30p/L7e K02907 - - 0.00000000000004698 74.0
YYD2_k127_3445167_14 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000162 71.0
YYD2_k127_3445167_2 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 362.0
YYD2_k127_3445167_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008002 317.0
YYD2_k127_3445167_4 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 289.0
YYD2_k127_3445167_5 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004299 258.0
YYD2_k127_3445167_6 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000000008375 214.0
YYD2_k127_3445167_7 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000004162 206.0
YYD2_k127_3445167_8 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000000000003041 195.0
YYD2_k127_3445167_9 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000002372 171.0
YYD2_k127_3445670_0 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 324.0
YYD2_k127_3445670_1 PP-loop family K21947 - 2.8.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 304.0
YYD2_k127_3445670_2 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000004943 158.0
YYD2_k127_3445670_3 Belongs to the peptidase S8 family - - - 0.00000002658 64.0
YYD2_k127_3445670_4 thiamine diphosphate biosynthetic process K03154 - - 0.00000386 51.0
YYD2_k127_3460960_0 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000006805 238.0
YYD2_k127_3460960_1 PFAM OsmC family protein K07397 - - 0.0000000000000000000000000000000001087 138.0
YYD2_k127_3460960_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000001535 117.0
YYD2_k127_3460960_3 cyclic nucleotide binding K10914 - - 0.000000000000000000000001593 109.0
YYD2_k127_3474652_0 ATP synthesis coupled electron transport K00336 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009405,GO:0010941,GO:0016020,GO:0016491,GO:0016651,GO:0030312,GO:0033668,GO:0035821,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044464,GO:0044531,GO:0044532,GO:0048037,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051536,GO:0051540,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0055114,GO:0060548,GO:0065007,GO:0071944 1.6.5.3 4.276e-203 640.0
YYD2_k127_3474652_1 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000005637 229.0
YYD2_k127_3481024_0 Belongs to the peptidase S8 family K13275 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 535.0
YYD2_k127_3481024_1 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 470.0
YYD2_k127_3481024_10 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000108 78.0
YYD2_k127_3481024_11 Domain of unknown function (DU1801) - - - 0.0000000001456 68.0
YYD2_k127_3481024_12 DinB superfamily - - - 0.000000001559 64.0
YYD2_k127_3481024_2 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 329.0
YYD2_k127_3481024_3 heme binding K21472 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009377 282.0
YYD2_k127_3481024_4 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000000000003011 216.0
YYD2_k127_3481024_5 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000007674 220.0
YYD2_k127_3481024_6 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K07025,K20866 - 3.1.3.10 0.000000000000000000000000000000000000001832 154.0
YYD2_k127_3481024_7 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.00000000000000000000000000000000000003944 151.0
YYD2_k127_3481024_8 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000006832 105.0
YYD2_k127_3481024_9 - - - - 0.0000000000000000002536 98.0
YYD2_k127_3491271_0 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 353.0
YYD2_k127_3491271_1 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 317.0
YYD2_k127_3491271_2 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 314.0
YYD2_k127_3491271_3 4-vinyl reductase, 4VR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 292.0
YYD2_k127_3491271_4 PFAM Roadblock LC7 family protein K07131 - - 0.000000000000000000000000000000000000000000000000000000008333 200.0
YYD2_k127_3491271_5 Domain of unknown function (DUF348) - - - 0.0000000000000000000000000000000000004988 144.0
YYD2_k127_3491271_6 - - - - 0.00000000000005462 73.0
YYD2_k127_3502833_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000001056 277.0
YYD2_k127_3502833_1 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008859 262.0
YYD2_k127_3510709_0 COGs COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009429 437.0
YYD2_k127_3510709_2 carboxylic acid catabolic process - - - 0.000000000005943 71.0
YYD2_k127_3547352_0 Ig-like domain from next to BRCA1 gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 308.0
YYD2_k127_3547352_1 Chromosome 6 open reading frame 106 - GO:0000407,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005776,GO:0006914,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016236,GO:0032182,GO:0043130,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0061919 - 0.00000006755 63.0
YYD2_k127_355456_0 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 434.0
YYD2_k127_355456_1 response to heat K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001695 279.0
YYD2_k127_3643204_0 uridine kinase K00876 - 2.7.1.48 5.77e-213 675.0
YYD2_k127_3643204_1 Integral membrane protein DUF92 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002835 279.0
YYD2_k127_3643204_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000004842 206.0
YYD2_k127_3643204_4 arylsulfatase activity K07014 - - 0.00000000000000000000000000000000001055 156.0
YYD2_k127_3643204_5 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000003031 60.0
YYD2_k127_3643204_6 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0001846 44.0
YYD2_k127_3643807_0 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 525.0
YYD2_k127_3643807_1 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 499.0
YYD2_k127_3643807_10 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.0000000001218 70.0
YYD2_k127_3643807_2 Belongs to the ABC transporter superfamily K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 459.0
YYD2_k127_3643807_3 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000778 442.0
YYD2_k127_3643807_4 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 394.0
YYD2_k127_3643807_5 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006923 359.0
YYD2_k127_3643807_6 COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001311 284.0
YYD2_k127_3643807_7 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000000001104 156.0
YYD2_k127_3643807_8 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000009527 123.0
YYD2_k127_3643807_9 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000222 92.0
YYD2_k127_3665831_0 ROK family K00845,K13967,K19979,K20433 - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 9.461e-199 629.0
YYD2_k127_3665831_1 Ferrous iron transport protein B C terminus K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 518.0
YYD2_k127_3665831_2 PFAM ROK family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 466.0
YYD2_k127_3665831_3 iron ion homeostasis K03322,K03709,K04758 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 456.0
YYD2_k127_3665831_4 Ferrous iron transport protein B - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 430.0
YYD2_k127_3665831_5 iron dependent repressor K03709 - - 0.0000000000000000000000000000000000000000000000000000000000000000000944 237.0
YYD2_k127_3684342_0 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006056 275.0
YYD2_k127_3684342_1 serine threonine protein kinase K12132 - 2.7.11.1 0.000006202 54.0
YYD2_k127_369282_0 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 421.0
YYD2_k127_369282_1 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 345.0
YYD2_k127_369282_2 PFAM YbbR family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000122 271.0
YYD2_k127_369282_3 - - - - 0.000001224 55.0
YYD2_k127_3700162_0 NTF2-like N-terminal transpeptidase domain K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 609.0
YYD2_k127_3700162_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 586.0
YYD2_k127_3700162_10 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis K03816 - 2.4.2.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003401 278.0
YYD2_k127_3700162_11 DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001392 283.0
YYD2_k127_3700162_12 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005365 272.0
YYD2_k127_3700162_13 PFAM metal-dependent phosphohydrolase, HD sub domain K06950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002626 263.0
YYD2_k127_3700162_14 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000249 265.0
YYD2_k127_3700162_15 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000002421 264.0
YYD2_k127_3700162_16 PFAM Maf family protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003366 256.0
YYD2_k127_3700162_17 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000381 241.0
YYD2_k127_3700162_18 Inositol monophosphatase K01082,K01092 GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000006643 243.0
YYD2_k127_3700162_19 PFAM NADH flavin oxidoreductase NADH oxidase K00317 - 1.5.8.1,1.5.8.2 0.0000000000000000000000000000000000000000000000000000000008036 205.0
YYD2_k127_3700162_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005324 467.0
YYD2_k127_3700162_20 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000006889 171.0
YYD2_k127_3700162_21 histone acetyltransferase HPA2 and related acetyltransferases K01246 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008080,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0044424,GO:0044464 3.2.2.20 0.000000000000000000000000000000000000000003603 160.0
YYD2_k127_3700162_22 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000007007 158.0
YYD2_k127_3700162_23 Domain of unknown function (DUF4491) - - - 0.0000000000000000000000000000000000000001528 151.0
YYD2_k127_3700162_24 - - - - 0.00000000000000000000000000000000000004991 156.0
YYD2_k127_3700162_25 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000001803 115.0
YYD2_k127_3700162_26 Methyltransferase domain - - - 0.0000000000000000000157 104.0
YYD2_k127_3700162_3 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 446.0
YYD2_k127_3700162_4 PFAM conserved K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 417.0
YYD2_k127_3700162_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 399.0
YYD2_k127_3700162_6 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines K01476,K01480 GO:0003674,GO:0003824,GO:0004053,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 3.5.3.1,3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 361.0
YYD2_k127_3700162_7 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005558 323.0
YYD2_k127_3700162_8 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008847 323.0
YYD2_k127_3700162_9 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005536 311.0
YYD2_k127_3736150_0 Fumarate hydratase (Fumerase) K01676,K01677 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 402.0
YYD2_k127_3736150_1 Fumarase C-terminus K01676,K01678 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009786 328.0
YYD2_k127_3736150_2 PFAM fumarate lyase K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008404 325.0
YYD2_k127_3736150_3 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005632 248.0
YYD2_k127_3736150_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000298 175.0
YYD2_k127_3746717_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 309.0
YYD2_k127_3746717_1 PFAM Isochorismatase - - - 0.0000000000000000000000000000000000000000000000000000000004289 213.0
YYD2_k127_3746717_2 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000004512 198.0
YYD2_k127_3746717_3 Amidohydrolase family - - - 0.0000000000000000000000000000000002645 149.0
YYD2_k127_3746717_4 - - - - 0.0000000000000000000000001341 114.0
YYD2_k127_3747207_0 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 321.0
YYD2_k127_3747207_1 PFAM DNA methylase N-4 N-6 K00571,K07316 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000003968 242.0
YYD2_k127_3747207_2 Phospholipase/Carboxylesterase - - - 0.00000000000000001635 92.0
YYD2_k127_3747207_3 PFAM zinc finger, SWIM domain protein - - - 0.0000000000002196 71.0
YYD2_k127_3747207_4 Psort location CytoplasmicMembrane, score - - - 0.000000001321 71.0
YYD2_k127_3773607_0 histidine kinase A domain protein - - - 7.105e-213 692.0
YYD2_k127_3782451_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239 - 1.3.5.1,1.3.5.4 1.271e-284 884.0
YYD2_k127_3782451_1 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 341.0
YYD2_k127_3782451_2 Cytochrome b/b6/petB K00412,K03888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002835 244.0
YYD2_k127_3782451_3 nUDIX hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000001235 220.0
YYD2_k127_3782451_4 PFAM WD domain, G-beta repeat - - - 0.0000000000000000000000000004771 130.0
YYD2_k127_3782451_5 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.00000000000000000000005739 107.0
YYD2_k127_3782451_6 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.0000000000000000003999 89.0
YYD2_k127_3782451_7 Cytochrome b subunit of the bc complex K00412 - - 0.000000000000000209 92.0
YYD2_k127_3782451_8 succinate dehydrogenase, cytochrome K00241 - - 0.00000005952 59.0
YYD2_k127_3782451_9 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.00009713 50.0
YYD2_k127_3798742_0 Family 4 glycosyl hydrolase K01222 - 3.2.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009843 554.0
YYD2_k127_3798742_1 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 402.0
YYD2_k127_3798742_2 MFS/sugar transport protein K03292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 387.0
YYD2_k127_3798742_3 BadF/BadG/BcrA/BcrD ATPase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009247 288.0
YYD2_k127_3798742_4 MFS/sugar transport protein K03292 - - 0.0000000000000000000000000000000000000000000000000000009589 200.0
YYD2_k127_3798742_5 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.0000000000000000000000000000000001276 149.0
YYD2_k127_3804780_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 516.0
YYD2_k127_3804780_1 energy transducer activity K03531,K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006544 314.0
YYD2_k127_3804780_2 PFAM Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000001599 236.0
YYD2_k127_3804780_3 Protein of unknown function (DUF3090) - - - 0.000000000000000000000000000000000000000000000000000000000000009772 220.0
YYD2_k127_3804780_4 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01838 - 5.4.2.6 0.00000000000000000000000000000000000000000000000001219 188.0
YYD2_k127_3804780_5 Acyl-transferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000007058 176.0
YYD2_k127_3804780_6 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K18917 - 1.20.4.3 0.000000000000000000000000005719 111.0
YYD2_k127_3804780_7 enzyme binding K00567,K07443 - 2.1.1.63 0.00000000000003115 76.0
YYD2_k127_3805815_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1310.0
YYD2_k127_3805815_1 Aldehyde dehydrogenase 16 family member A1 K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 578.0
YYD2_k127_3805815_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000002537 116.0
YYD2_k127_3823013_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 447.0
YYD2_k127_3823013_1 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 312.0
YYD2_k127_3823013_2 ABC-2 family transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001309 244.0
YYD2_k127_3823013_3 SdpI/YhfL protein family - - - 0.00000000000000000000000000000000000000000000000000409 186.0
YYD2_k127_3823013_4 PFAM Abortive infection protein - - - 0.00000000000000000000000000000000000000000000008539 179.0
YYD2_k127_3824380_0 May be involved in recombinational repair of damaged DNA K03631 - - 2.546e-199 638.0
YYD2_k127_3824380_1 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 433.0
YYD2_k127_3824380_10 serine-type endopeptidase activity - - - 0.000000000001266 79.0
YYD2_k127_3824380_2 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 415.0
YYD2_k127_3824380_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001909 285.0
YYD2_k127_3824380_4 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002759 275.0
YYD2_k127_3824380_5 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004681 252.0
YYD2_k127_3824380_6 ABC-type dipeptide transport system periplasmic component K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000006186 240.0
YYD2_k127_3824380_7 Domain of unknown function DUF83 K07464 - 3.1.12.1 0.000000000000000000000000000000000000000000000000000006573 194.0
YYD2_k127_3824380_8 Type IV pilus biogenesis stability protein PilW - - - 0.00000000000000000000000000000000002257 141.0
YYD2_k127_3832092_0 Immune inhibitor A peptidase M6 - - - 6.308e-226 719.0
YYD2_k127_3832092_1 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 540.0
YYD2_k127_3832092_2 Uncharacterized protein conserved in bacteria (DUF2179) - - - 0.00000000000000000000000000000000007179 141.0
YYD2_k127_3832092_3 Cupin domain - - - 0.0000000000000000000000000000000002251 135.0
YYD2_k127_3832092_4 Rhodanese Homology Domain - - - 0.000000000000000002819 88.0
YYD2_k127_3872906_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 2.535e-237 741.0
YYD2_k127_3872906_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 2.138e-194 617.0
YYD2_k127_3872906_2 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 331.0
YYD2_k127_3872906_3 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000005788 146.0
YYD2_k127_3872906_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000195 131.0
YYD2_k127_3872906_5 Domain of unknown function (DUF4870) - - - 0.00000000000000008377 83.0
YYD2_k127_3907550_0 Tetratricopeptide TPR_2 repeat protein - - - 0.0 1369.0
YYD2_k127_3907550_1 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.0000000000000000000000000000000000000000000001996 176.0
YYD2_k127_3907550_2 Uncharacterized membrane protein (DUF2298) - - - 0.00000000000000000000000000000000000000004425 161.0
YYD2_k127_3907550_3 Protein of unknown function (DUF952) K00799 - 2.5.1.18 0.0000000000000000000000000000000125 130.0
YYD2_k127_3910672_0 Uncharacterized membrane protein (DUF2298) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007018 381.0
YYD2_k127_3910672_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000001413 98.0
YYD2_k127_3921005_0 modification enzyme, MiaB family K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006379 329.0
YYD2_k127_3921005_2 TIGRFAM PEP-CTERM system TPR-repeat lipoprotein - - - 0.0004793 45.0
YYD2_k127_3931123_0 cyclic 2,3-diphosphoglycerate synthetase activity - - - 4.44e-229 715.0
YYD2_k127_3931123_1 Myo-inositol-1-phosphate synthase, GAPDH domain protein K01858 - 5.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 559.0
YYD2_k127_3931123_2 peptidase dimerisation domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 325.0
YYD2_k127_3931123_3 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001569 280.0
YYD2_k127_3931123_4 GAF domain - - - 0.0000000000000000000000000000000000000000004393 173.0
YYD2_k127_3937355_0 3-deoxy-manno-octulosonate-8-phosphatase activity K00983,K03270 - 2.7.7.43,3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 514.0
YYD2_k127_3937355_1 NeuB family K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 422.0
YYD2_k127_3937355_2 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 371.0
YYD2_k127_3937355_3 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 355.0
YYD2_k127_3937355_4 Sulfotransferase domain - - - 0.00000000000000000000000000000005583 136.0
YYD2_k127_3937355_5 - - - - 0.00000000000000004622 95.0
YYD2_k127_3937355_6 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 0.0000000000004024 69.0
YYD2_k127_3961190_0 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000000001415 213.0
YYD2_k127_3961190_1 Restriction endonuclease K07448 - - 0.00000000000000000000000000000000000000000000000000000000001656 216.0
YYD2_k127_3961190_2 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000003647 206.0
YYD2_k127_3961190_3 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000001226 147.0
YYD2_k127_3961190_4 - - - - 0.000000000000000000000001939 115.0
YYD2_k127_3961190_5 Belongs to the MraZ family K03925 - - 0.00000000000000000000006807 105.0
YYD2_k127_3961190_6 Pfam:Arch_ATPase - - - 0.000000000000000002571 94.0
YYD2_k127_3961190_7 SMART Tetratricopeptide repeat - - - 0.000002915 59.0
YYD2_k127_3974867_0 ABC transporter, transmembrane region K06147 - - 1.399e-283 883.0
YYD2_k127_3974867_1 ABC transporter K06147 - - 5.056e-255 806.0
YYD2_k127_3974867_10 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.000000000000000000000000000000000000000000000000000000000000000000008462 238.0
YYD2_k127_3974867_11 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000001516 215.0
YYD2_k127_3974867_13 TIGRFAM DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000009927 203.0
YYD2_k127_3974867_14 PFAM regulatory protein, MerR - - - 0.0000000000000000000000000006997 120.0
YYD2_k127_3974867_15 - - - - 0.0000000000000000000000001629 114.0
YYD2_k127_3974867_16 Pfam:DUF385 - - - 0.00000000000001301 81.0
YYD2_k127_3974867_17 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000009965 56.0
YYD2_k127_3974867_2 sphinganine-1-phosphate aldolase activity K01634,K20704 GO:0000003,GO:0001501,GO:0001553,GO:0001568,GO:0001570,GO:0001655,GO:0001667,GO:0001822,GO:0001944,GO:0002376,GO:0002520,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005938,GO:0006082,GO:0006629,GO:0006631,GO:0006643,GO:0006665,GO:0006672,GO:0006807,GO:0006873,GO:0006874,GO:0006875,GO:0006915,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006996,GO:0007010,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007283,GO:0007525,GO:0007527,GO:0007548,GO:0008064,GO:0008117,GO:0008150,GO:0008152,GO:0008202,GO:0008209,GO:0008210,GO:0008219,GO:0008406,GO:0008584,GO:0008585,GO:0008610,GO:0009056,GO:0009058,GO:0009267,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009653,GO:0009791,GO:0009887,GO:0009987,GO:0009991,GO:0010171,GO:0010646,GO:0010761,GO:0010817,GO:0012501,GO:0012505,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016477,GO:0016829,GO:0016830,GO:0016832,GO:0019722,GO:0019725,GO:0019752,GO:0019932,GO:0019953,GO:0022414,GO:0022602,GO:0023052,GO:0030003,GO:0030029,GO:0030036,GO:0030097,GO:0030148,GO:0030149,GO:0030154,GO:0030176,GO:0030435,GO:0030587,GO:0030832,GO:0030833,GO:0031156,GO:0031157,GO:0031158,GO:0031224,GO:0031227,GO:0031272,GO:0031273,GO:0031275,GO:0031276,GO:0031344,GO:0031345,GO:0031667,GO:0031668,GO:0031669,GO:0031984,GO:0032101,GO:0032104,GO:0032107,GO:0032271,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032541,GO:0032787,GO:0032956,GO:0032970,GO:0033043,GO:0033327,GO:0033554,GO:0034641,GO:0034754,GO:0035239,GO:0035295,GO:0035556,GO:0040008,GO:0040011,GO:0040014,GO:0042175,GO:0042221,GO:0042330,GO:0042331,GO:0042445,GO:0042592,GO:0042594,GO:0042698,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043436,GO:0043603,GO:0043900,GO:0043934,GO:0044087,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0044703,GO:0045137,GO:0046466,GO:0046467,GO:0046545,GO:0046546,GO:0046660,GO:0046661,GO:0046956,GO:0048008,GO:0048232,GO:0048471,GO:0048511,GO:0048513,GO:0048514,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048608,GO:0048609,GO:0048638,GO:0048646,GO:0048705,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050830,GO:0050896,GO:0051128,GO:0051129,GO:0051179,GO:0051239,GO:0051493,GO:0051674,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0052128,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060021,GO:0060176,GO:0060322,GO:0060323,GO:0060324,GO:0060325,GO:0060491,GO:0061061,GO:0061458,GO:0065007,GO:0065008,GO:0071496,GO:0071704,GO:0071782,GO:0071840,GO:0071944,GO:0072001,GO:0072358,GO:0072359,GO:0072503,GO:0072507,GO:0080134,GO:0080135,GO:0090066,GO:0090702,GO:0097038,GO:0097190,GO:0098542,GO:0098771,GO:0098827,GO:0099120,GO:0099568,GO:0110053,GO:0120032,GO:0120033,GO:0120035,GO:1901360,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1902903 4.1.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 528.0
YYD2_k127_3974867_3 aminopeptidase activity K19701,K19702 - 3.4.11.10,3.4.11.24,3.4.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 452.0
YYD2_k127_3974867_4 PFAM PUCC protein K08226 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 410.0
YYD2_k127_3974867_5 Berberine and berberine like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003205 404.0
YYD2_k127_3974867_6 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008728 324.0
YYD2_k127_3974867_7 PFAM bifunctional deaminase-reductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 301.0
YYD2_k127_3974867_8 Belongs to the HpcH HpaI aldolase family K01644,K08691 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006107,GO:0008150,GO:0008152,GO:0009987,GO:0015977,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0043167,GO:0043169,GO:0043427,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0046872,GO:0047777,GO:0050083,GO:0071704 4.1.3.24,4.1.3.25,4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000001119 260.0
YYD2_k127_3974867_9 Alpha beta hydrolase K14731 - 3.1.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000002489 257.0
YYD2_k127_3994800_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 6.809e-209 657.0
YYD2_k127_3994800_1 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 473.0
YYD2_k127_3994800_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000002524 221.0
YYD2_k127_4010857_0 elongation factor Tu domain 2 protein K06207 - - 6.805e-294 912.0
YYD2_k127_4010857_1 PFAM aminotransferase class V K04127 - 5.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 460.0
YYD2_k127_4010857_2 PFAM NADP oxidoreductase coenzyme F420-dependent K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 387.0
YYD2_k127_4010857_3 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001295 280.0
YYD2_k127_4010857_4 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206,K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000001254 265.0
YYD2_k127_4010857_5 PFAM Patatin K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000001212 232.0
YYD2_k127_4010857_6 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000000000003143 205.0
YYD2_k127_4010857_7 - - - - 0.0000000000000000000000000000000000000000000000000000005448 202.0
YYD2_k127_4010857_8 response to heat - - - 0.00000000002175 75.0
YYD2_k127_4010857_9 cellulase activity - - - 0.0000136 56.0
YYD2_k127_4024066_0 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 397.0
YYD2_k127_4024066_1 TIGRFAM polymorphic outer membrane protein K21449 - - 0.00000000000000000000000000000000000000000000000000000002939 216.0
YYD2_k127_4024066_2 Esterase PHB depolymerase - - - 0.000000002276 70.0
YYD2_k127_4040134_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 3.516e-221 717.0
YYD2_k127_4040134_1 PFAM TPR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 602.0
YYD2_k127_4040134_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 386.0
YYD2_k127_4040134_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007486 339.0
YYD2_k127_4040134_4 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007486 267.0
YYD2_k127_4040134_5 PFAM Translin K07477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000435 252.0
YYD2_k127_4040134_6 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000001385 254.0
YYD2_k127_4040134_7 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000001397 185.0
YYD2_k127_4040134_8 nucleoside 2-deoxyribosyltransferase - GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009123,GO:0009125,GO:0009159,GO:0009162,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0070694,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 0.0000000000000000000000000008508 125.0
YYD2_k127_4040134_9 Histidine kinase K01768,K12132 - 2.7.11.1,4.6.1.1 0.0000000000001879 75.0
YYD2_k127_404559_0 Glycyl-tRNA synthetase alpha subunit K14164 - 6.1.1.14 0.0 1090.0
YYD2_k127_404559_1 NADPH quinone reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008336 413.0
YYD2_k127_404559_2 PFAM Glucose Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 376.0
YYD2_k127_404559_3 ABC transporter K09697 - 3.6.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000001189 253.0
YYD2_k127_404559_4 Acetyltransferase, gnat family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009341 251.0
YYD2_k127_404559_5 permease K09696 - - 0.0000000000000000000001188 111.0
YYD2_k127_404559_6 geranylgeranyl reductase - - - 0.000000000000000001689 100.0
YYD2_k127_4049389_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 394.0
YYD2_k127_4049389_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 346.0
YYD2_k127_4049389_2 Hypothetical methyltransferase - - - 0.0000000000000000000000000000000000000000003254 166.0
YYD2_k127_4073679_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 4.779e-217 683.0
YYD2_k127_4073679_1 SMART Nucleotide binding protein, PINc - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 435.0
YYD2_k127_4073679_2 GPH family sugar transporter K03292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009061 301.0
YYD2_k127_4073679_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000005089 233.0
YYD2_k127_4073679_4 PFAM glycosyl transferase, family 51 - - - 0.00000000000000000000000000000000000000000000205 174.0
YYD2_k127_4079173_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1517.0
YYD2_k127_4079173_1 MBOAT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 435.0
YYD2_k127_4079173_10 FES K10773 - 4.2.99.18 0.00000000000000000009195 90.0
YYD2_k127_4079173_11 - - - - 0.000000000421 66.0
YYD2_k127_4079173_2 PhoQ Sensor K07682 GO:0000166,GO:0000287,GO:0001666,GO:0003032,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005509,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009593,GO:0009628,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0019825,GO:0019826,GO:0020037,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0036293,GO:0040007,GO:0042165,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0046872,GO:0046906,GO:0048037,GO:0050896,GO:0051606,GO:0051775,GO:0051776,GO:0070025,GO:0070026,GO:0070482,GO:0070483,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000395 421.0
YYD2_k127_4079173_3 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005623 319.0
YYD2_k127_4079173_4 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009729 291.0
YYD2_k127_4079173_5 L-asparaginase II K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008481 293.0
YYD2_k127_4079173_6 aminoglycoside 3-N-acetyltransferase activity K00662 - 2.3.1.81 0.0000000000000000000000000000000000000000000000000000000000000000127 233.0
YYD2_k127_4079173_7 glycolate biosynthetic process K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000002853 224.0
YYD2_k127_4079173_8 - - - - 0.00000000000000000000000000000000000000002192 157.0
YYD2_k127_4079173_9 - - - - 0.0000000000000000000000004007 117.0
YYD2_k127_4085111_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 503.0
YYD2_k127_4085111_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 463.0
YYD2_k127_4085111_3 Amidohydrolase family - - - 0.00000000006757 65.0
YYD2_k127_4095431_0 - - - - 0.000000000000000000000000000000000000000000000000001168 200.0
YYD2_k127_4095431_1 - - - - 0.000000000009097 72.0
YYD2_k127_4127187_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 592.0
YYD2_k127_4127187_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007814 565.0
YYD2_k127_4127187_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 496.0
YYD2_k127_4127187_3 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 330.0
YYD2_k127_412720_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 9.764e-269 844.0
YYD2_k127_412720_1 peptidase M29 aminopeptidase II K19689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009998 436.0
YYD2_k127_412720_10 N-terminal 7TM region of histidine kinase - - - 0.00000001934 63.0
YYD2_k127_412720_2 PFAM Glycosyl transferases group 1 K19002 - 2.4.1.337 0.0000000000000000000000000000000000000000000000000000362 204.0
YYD2_k127_412720_3 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000001652 191.0
YYD2_k127_412720_4 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000226 183.0
YYD2_k127_412720_5 Belongs to the Nudix hydrolase family - - - 0.00000000000000000000000000000000000000000001646 166.0
YYD2_k127_412720_6 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family K13687 - - 0.0000000000000000000000000000000000000004326 154.0
YYD2_k127_412720_7 NUDIX domain - - - 0.00000000000000000000000000000002985 132.0
YYD2_k127_412720_8 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000004838 135.0
YYD2_k127_412720_9 SNARE-like domain protein - - - 0.0000000000000000002495 96.0
YYD2_k127_414003_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 473.0
YYD2_k127_414003_1 DNA helicase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005186 245.0
YYD2_k127_414003_2 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000001111 180.0
YYD2_k127_4156823_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 440.0
YYD2_k127_4156823_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 411.0
YYD2_k127_4156823_10 SMART helix-turn-helix domain protein K15539 - - 0.0000000000008865 76.0
YYD2_k127_4156823_11 4Fe-4S binding domain - - - 0.00000007305 55.0
YYD2_k127_4156823_12 PFAM cytoplasmic peptidoglycan synthetase domain protein K11754 - 6.3.2.12,6.3.2.17 0.000001627 52.0
YYD2_k127_4156823_2 Enoyl-(Acyl carrier protein) reductase K00059,K00068 - 1.1.1.100,1.1.1.140 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 327.0
YYD2_k127_4156823_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000002446 261.0
YYD2_k127_4156823_4 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000001306 233.0
YYD2_k127_4156823_5 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000001185 194.0
YYD2_k127_4156823_6 SMART helix-turn-helix domain protein K15539 - - 0.00000000000000000000000000000000000000000000000003128 194.0
YYD2_k127_4156823_7 integral membrane protein - - - 0.0000000000000000000000000000000000000003095 154.0
YYD2_k127_4156823_8 bis(5'-adenosyl)-triphosphatase activity - - - 0.000000000000000000000000000002072 124.0
YYD2_k127_4156823_9 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000000000001721 112.0
YYD2_k127_4187922_0 Beta-Casp domain K07576 - - 3.002e-200 632.0
YYD2_k127_4187922_1 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 455.0
YYD2_k127_4187922_2 3'-5' exonuclease K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 328.0
YYD2_k127_4187922_3 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000009653 231.0
YYD2_k127_4187922_4 acetyltransferase K03789 - 2.3.1.128 0.000000000000000000000000000002058 129.0
YYD2_k127_4187922_5 - - - - 0.00000000000000000000000000003689 121.0
YYD2_k127_4187922_6 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000958 58.0
YYD2_k127_422501_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 502.0
YYD2_k127_422501_1 PFAM metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004032 268.0
YYD2_k127_4232468_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733,K22010 - 4.2.3.1 4.072e-214 677.0
YYD2_k127_4232468_1 protein histidine kinase activity K01768,K11527,K18143 - 2.7.13.3,4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008555 467.0
YYD2_k127_4232468_2 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 362.0
YYD2_k127_4232468_3 protein histidine kinase activity K01768,K11527,K18143 - 2.7.13.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000007227 253.0
YYD2_k127_4232468_4 protein histidine kinase activity K01768,K11527,K18143 - 2.7.13.3,4.6.1.1 0.0000000000000000000000000000000000000003037 173.0
YYD2_k127_4232468_5 PFAM response regulator receiver K11443 - - 0.00000000000000000000000000000000000006266 149.0
YYD2_k127_4232468_6 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit K07315 - 3.1.3.3 0.000000000000000000000001542 122.0
YYD2_k127_4232468_7 response regulator, receiver - - - 0.0000000000134 78.0
YYD2_k127_4232468_8 Histidine kinase - - - 0.0000000004926 73.0
YYD2_k127_4232468_9 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 - 4.2.3.1 0.000000002081 59.0
YYD2_k127_4268833_0 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000898 544.0
YYD2_k127_4268833_1 PFAM Glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 366.0
YYD2_k127_4268833_3 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 304.0
YYD2_k127_4268833_4 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.000000000000000000000000000000000000000000000000000000006936 199.0
YYD2_k127_4268833_5 Phosphoglycerate mutase family K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000006823 172.0
YYD2_k127_4268833_6 transport - - - 0.00000005062 56.0
YYD2_k127_4270211_0 PFAM Radical SAM domain protein K22227 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 486.0
YYD2_k127_4270211_1 Peptidase family M28 - - - 0.000000007639 64.0
YYD2_k127_4281078_0 hydrolase activity, hydrolyzing O-glycosyl compounds K00690 - 2.4.1.7 9.008e-194 620.0
YYD2_k127_4281078_1 transferase activity, transferring glycosyl groups K21369 - 2.4.1.270 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 495.0
YYD2_k127_4281078_2 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 478.0
YYD2_k127_4281078_4 transferase activity, transferring glycosyl groups K09118,K13693,K21349 - 2.4.1.266,2.4.1.268 0.000000000000000000000000000000000000000000006042 173.0
YYD2_k127_4282288_0 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 489.0
YYD2_k127_4282288_1 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 364.0
YYD2_k127_4282288_2 Shikimate quinate 5-dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 364.0
YYD2_k127_4284820_0 Enoyl-(Acyl carrier protein) reductase K10780 - 1.3.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 302.0
YYD2_k127_4299242_1 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000001169 101.0
YYD2_k127_4318635_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 517.0
YYD2_k127_4318635_1 Amidohydrolase family K01464,K01466 - 3.5.2.2,3.5.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 494.0
YYD2_k127_4318635_2 PFAM phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000002274 178.0
YYD2_k127_4318635_3 PFAM phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000012 162.0
YYD2_k127_4318771_0 Peptidase_C39 like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009388 299.0
YYD2_k127_4318771_1 family 25 K01185,K07273 GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.17 0.000000000000000000000000003644 117.0
YYD2_k127_4333417_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 2.93e-292 908.0
YYD2_k127_4333417_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 501.0
YYD2_k127_4333417_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005522 270.0
YYD2_k127_4333417_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002 251.0
YYD2_k127_4333417_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000002136 166.0
YYD2_k127_4333417_5 Appr-1-p processing domain protein - - - 0.0000000000000000000000000000000000000000000298 170.0
YYD2_k127_4333417_6 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000005867 109.0
YYD2_k127_4333417_7 Wd40 repeat-containing protein - - - 0.000000000000000000000004795 119.0
YYD2_k127_4333417_8 Transcriptional regulator PadR-like family - - - 0.00000000000000001828 87.0
YYD2_k127_4333417_9 PFAM Forkhead-associated protein - - - 0.000007034 51.0
YYD2_k127_4386121_0 PFAM acyl-CoA dehydrogenase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004652 291.0
YYD2_k127_4386121_1 Electron transfer flavoprotein K03522 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000002978 247.0
YYD2_k127_4386121_2 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000005882 193.0
YYD2_k127_4390902_0 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 590.0
YYD2_k127_4390902_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 404.0
YYD2_k127_4390902_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009463 377.0
YYD2_k127_4390902_3 exo-alpha-(2->6)-sialidase activity K01186 GO:0001573,GO:0003674,GO:0003824,GO:0004308,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006672,GO:0006687,GO:0006689,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0016020,GO:0016042,GO:0016052,GO:0016787,GO:0016798,GO:0016997,GO:0019377,GO:0030149,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044424,GO:0044464,GO:0046466,GO:0046479,GO:0046514,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903509 3.2.1.18 0.000000000000000000000000000000000000000000000000000001753 205.0
YYD2_k127_4390902_4 response to heat K03668 - - 0.000000000001364 78.0
YYD2_k127_4390902_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0001409 52.0
YYD2_k127_4425858_0 PFAM Amidohydrolase 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007298 569.0
YYD2_k127_4425858_1 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006104 376.0
YYD2_k127_4425858_10 PFAM single-stranded nucleic acid binding R3H domain protein K06346 - - 0.0000000000000000000000000000000000000000000000000000000000000000009533 236.0
YYD2_k127_4425858_11 sequence-specific DNA binding - - - 0.0000000000000000000000000000000000000000000007136 174.0
YYD2_k127_4425858_12 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000003522 175.0
YYD2_k127_4425858_13 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000000000000000003737 153.0
YYD2_k127_4425858_14 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000008649 125.0
YYD2_k127_4425858_15 PQQ-like domain - - - 0.0000000000000000000000000005927 128.0
YYD2_k127_4425858_16 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000004301 97.0
YYD2_k127_4425858_17 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000003322 87.0
YYD2_k127_4425858_18 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000007783 52.0
YYD2_k127_4425858_2 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061 358.0
YYD2_k127_4425858_3 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 355.0
YYD2_k127_4425858_4 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 340.0
YYD2_k127_4425858_5 PFAM PfkB domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 329.0
YYD2_k127_4425858_6 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 303.0
YYD2_k127_4425858_7 PFAM 60 kDa inner membrane insertion protein K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007893 278.0
YYD2_k127_4425858_8 TrkA-C domain K03499 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000667 273.0
YYD2_k127_4425858_9 TrkA-N domain K03499,K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000003147 241.0
YYD2_k127_4435033_0 Aromatic amino acid lyase K01745 - 4.3.1.3 2.448e-249 779.0
YYD2_k127_4435033_1 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 413.0
YYD2_k127_4435033_11 - - - - 0.000008922 53.0
YYD2_k127_4435033_13 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0003634 47.0
YYD2_k127_4435033_2 PFAM histone deacetylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001566 259.0
YYD2_k127_4435033_3 tRNA wobble cytosine modification - - - 0.000000000000000000000000000000000000000000000000000000001462 210.0
YYD2_k127_4435033_4 OsmC-like protein K09136 - - 0.000000000000000000000000000000000000000000000000000992 186.0
YYD2_k127_4435033_6 TOBE domain - - - 0.00000000000000000000007326 100.0
YYD2_k127_4435033_7 PBP superfamily domain - - - 0.0000000000000000000005109 99.0
YYD2_k127_4435033_8 YacP-like NYN domain K06962 - - 0.0000000000000000001274 95.0
YYD2_k127_4435033_9 Zinc finger domain - - - 0.00000000000000001779 94.0
YYD2_k127_4446298_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 559.0
YYD2_k127_4446298_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000007039 205.0
YYD2_k127_4446298_2 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000001914 168.0
YYD2_k127_4446298_3 PFAM LmbE family protein - - - 0.000000000000000000000000000000000000001999 158.0
YYD2_k127_4446298_4 - - - - 0.0000000000000000000000000000000005434 137.0
YYD2_k127_4446298_5 LysM domain K07273,K22278 - 3.5.1.104 0.000000000000000000009614 101.0
YYD2_k127_4459486_0 Lysine-2,3-aminomutase K01843 - 5.4.3.2 6.626e-238 741.0
YYD2_k127_4459486_1 PFAM Uncharacterised protein, DegV family COG1307 - - - 0.000000000000005689 82.0
YYD2_k127_4512057_0 COGs COG1136 ABC-type antimicrobial peptide transport system ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 398.0
YYD2_k127_4512057_1 efflux transmembrane transporter activity K02004 - - 0.00000000000000000002316 93.0
YYD2_k127_4517676_0 Family 4 glycosyl hydrolase K07406 - 3.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 501.0
YYD2_k127_4517676_1 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 466.0
YYD2_k127_4517676_2 Nucleoside H+ symporter K05820 - - 0.0000000000000000000000000000000000000000000001211 189.0
YYD2_k127_4536234_0 - - - - 0.000000000001421 79.0
YYD2_k127_4547511_0 PFAM SMC domain protein K03546 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 376.0
YYD2_k127_4547511_1 peptidase M42 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 335.0
YYD2_k127_4547921_0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K09065 - 2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 521.0
YYD2_k127_4547921_1 Amino acid kinase family K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 467.0
YYD2_k127_4547921_2 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 440.0
YYD2_k127_4577247_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 4.213e-213 671.0
YYD2_k127_4577247_1 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007649 324.0
YYD2_k127_4577247_2 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003883 245.0
YYD2_k127_4577247_3 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.0000000000000000000000000000000000000000000000000000003439 195.0
YYD2_k127_4577247_4 nUDIX hydrolase - - - 0.00000000000000000000000000000000009342 137.0
YYD2_k127_4578065_0 PFAM Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K00335,K05587 - 1.6.5.3 3.74e-222 699.0
YYD2_k127_4578065_1 TIGRFAM formate dehydrogenase, alpha subunit K00336,K05299 - 1.17.1.10,1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007155 604.0
YYD2_k127_4578065_2 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000001321 170.0
YYD2_k127_4578065_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000002294 89.0
YYD2_k127_4595184_0 NAD(P)H-binding K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 459.0
YYD2_k127_4595184_1 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 464.0
YYD2_k127_4595184_10 Cold-shock protein K03704 - - 0.00000000000000000000000001897 111.0
YYD2_k127_4595184_2 NADH ubiquinone oxidoreductase, 20 Kd subunit K12144,K14088,K15832 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 351.0
YYD2_k127_4595184_3 Immune inhibitor A peptidase M6 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 333.0
YYD2_k127_4595184_4 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000002373 234.0
YYD2_k127_4595184_6 hydrogenase 3 maturation protease K08315 GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.23.51 0.0000000000000000000000000000000000000000000001547 175.0
YYD2_k127_4595184_7 rRNA (adenine-N6,N6-)-dimethyltransferase activity K00561,K02528 - 2.1.1.182,2.1.1.184 0.000000000000000000000000000000000000001729 150.0
YYD2_k127_4595184_8 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000005323 138.0
YYD2_k127_4595184_9 Formate hydrogenlyase K12145,K15834 - - 0.00000000000000000000000000000001224 131.0
YYD2_k127_4597020_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 349.0
YYD2_k127_4597020_1 Transcriptional regulator - - - 0.0001185 49.0
YYD2_k127_4619452_0 glycosyltransferase 36 associated K00702,K13688 - 2.4.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 464.0
YYD2_k127_4619452_1 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000001802 194.0
YYD2_k127_4630920_0 PFAM Thermolysin metallopeptidase, alpha-helical domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 353.0
YYD2_k127_4630920_1 TIGRFAM polymorphic outer membrane protein K21449 - - 0.00000000000000000000000000000001417 149.0
YYD2_k127_4639890_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 419.0
YYD2_k127_4639890_1 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000007802 242.0
YYD2_k127_4639890_2 - K07403 - - 0.000000000000002859 78.0
YYD2_k127_4639890_3 Polysaccharide deacetylase - - - 0.00000000003198 74.0
YYD2_k127_4642911_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352,K21307 - 1.8.5.5,1.8.5.6 1.499e-247 784.0
YYD2_k127_4642911_1 4Fe-4S dicluster domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000317 205.0
YYD2_k127_4642911_2 Sulphur transport K07112 - - 0.00000000000000000000000000000000000001299 151.0
YYD2_k127_4642911_3 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000003848 135.0
YYD2_k127_4642911_4 Sulphur transport K07112 - - 0.0000000000000000000001528 99.0
YYD2_k127_4642911_5 Sulphur transport K07112 - - 0.000000000000001666 79.0
YYD2_k127_4650110_0 Belongs to the peptidase S51 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 328.0
YYD2_k127_4650110_1 impB/mucB/samB family K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005249 284.0
YYD2_k127_4650110_10 pathogenesis - - - 0.00006573 53.0
YYD2_k127_4650110_2 uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000359 270.0
YYD2_k127_4650110_3 ATP-grasp domain K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000001673 239.0
YYD2_k127_4650110_4 conserved protein (DUF2174) - - - 0.0000000000000000000000000000000000000000000000000000000000001026 218.0
YYD2_k127_4650110_5 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000003324 127.0
YYD2_k127_4650110_6 Redoxin - - - 0.00000000000000000000000000001725 120.0
YYD2_k127_4650110_7 PspC domain - - - 0.000000000000002767 77.0
YYD2_k127_4650110_8 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000005867 56.0
YYD2_k127_4650110_9 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000003844 55.0
YYD2_k127_4652152_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1085.0
YYD2_k127_4652152_1 ABC transporter CydDC cysteine exporter (CydDC-E) family permease ATP-binding protein CydD K16013 - - 9.058e-257 832.0
YYD2_k127_4652152_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 9.429e-223 696.0
YYD2_k127_4652152_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000611 469.0
YYD2_k127_4652152_4 PFAM Cytochrome bd ubiquinol oxidase, subunit II K00426 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 427.0
YYD2_k127_4652152_5 PFAM Cytochrome bd ubiquinol oxidase, subunit I K00425 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 410.0
YYD2_k127_4652152_6 TIGRFAM serine O-acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 290.0
YYD2_k127_4652152_7 Acyl- CoA dehydrogenase type 2 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003821 261.0
YYD2_k127_4652152_8 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000002895 244.0
YYD2_k127_4652152_9 Peptidoglycan-binding LysM - - - 0.0000000000000000000000000000000000000000000000000000000000000000001784 243.0
YYD2_k127_4665397_0 Serine threonine protein kinase K12132 - 2.7.11.1 5.049e-239 747.0
YYD2_k127_4665397_1 Two component transcriptional regulator, winged helix family K07667,K07668 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 383.0
YYD2_k127_4665397_2 PFAM von Willebrand factor type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 391.0
YYD2_k127_4665397_3 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005957 291.0
YYD2_k127_4665397_4 PFAM Forkhead-associated protein - - - 0.00000000000000000000000000000000000000001121 159.0
YYD2_k127_4665397_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000001075 140.0
YYD2_k127_4665397_6 PFAM Transposase IS200 like - - - 0.00000000000000000000005392 99.0
YYD2_k127_4665397_7 - - - - 0.0000000000000000000008823 96.0
YYD2_k127_4675331_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 3.835e-260 833.0
YYD2_k127_4675331_1 Serine threonine protein kinase K08884 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 302.0
YYD2_k127_4675331_2 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002901 281.0
YYD2_k127_4675331_3 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000002003 244.0
YYD2_k127_4675331_4 GHMP kinases C terminal K00869 - 2.7.1.36 0.000000000000000000000000000000000000000000000000008684 190.0
YYD2_k127_4686685_0 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 303.0
YYD2_k127_4686685_1 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 295.0
YYD2_k127_4686685_2 Citrate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001991 296.0
YYD2_k127_4686685_3 Serine aminopeptidase, S33 K03928 - 3.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000001335 242.0
YYD2_k127_4686685_4 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000164 215.0
YYD2_k127_4686685_5 Responsible for synthesis of pseudouridine from uracil K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000004869 207.0
YYD2_k127_4687607_0 Oligopeptidase F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 521.0
YYD2_k127_4687607_1 FG-GAP repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 351.0
YYD2_k127_4690057_0 Ig-like domain from next to BRCA1 gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 318.0
YYD2_k127_4690057_1 Ig-like domain from next to BRCA1 gene K13276 - - 0.0000000000000000003511 103.0
YYD2_k127_4690057_2 TIGRFAM esterase, PHB depolymerase family - - - 0.000000001215 65.0
YYD2_k127_4737541_0 ABC transporter transmembrane region K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 341.0
YYD2_k127_4737541_1 Uncharacterised nucleotidyltransferase - - - 0.00000000000000000003604 99.0
YYD2_k127_4754487_0 PFAM metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003718 261.0
YYD2_k127_4754487_1 Domain of unknown function (DUF4349) - - - 0.00000000000000000000000000000000000000000000000000000000007052 221.0
YYD2_k127_4754487_2 organic phosphonate transport K02044 - - 0.000000000000000000000000000000000007099 147.0
YYD2_k127_4754487_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000006629 124.0
YYD2_k127_479411_0 N-4 methylation of cytosine K00590 - 2.1.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 447.0
YYD2_k127_479411_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 376.0
YYD2_k127_479411_2 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007375 278.0
YYD2_k127_479411_3 PFAM peptidase M3A and M3B, thimet oligopeptidase F K08602 - - 0.0000000000000000000000000000000000000000005283 162.0
YYD2_k127_479411_4 Acyltransferase family - - - 0.000000000000000000000001848 117.0
YYD2_k127_479411_5 Ig-like domain from next to BRCA1 gene - - - 0.000000000000000000000239 105.0
YYD2_k127_479411_6 PhoQ Sensor - - - 0.00000000000000000009428 91.0
YYD2_k127_479411_7 methyltransferase - - - 0.00000000000001762 81.0
YYD2_k127_479411_8 acetyl-CoA - - - 0.000000001382 66.0
YYD2_k127_4794761_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.282e-270 842.0
YYD2_k127_4794761_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 326.0
YYD2_k127_4794761_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000003103 197.0
YYD2_k127_4803249_0 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 316.0
YYD2_k127_4803249_1 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004644 274.0
YYD2_k127_4803249_10 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000007031 109.0
YYD2_k127_4803249_11 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000007236 71.0
YYD2_k127_4803249_2 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000222 234.0
YYD2_k127_4803249_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000009439 218.0
YYD2_k127_4803249_4 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000002024 216.0
YYD2_k127_4803249_5 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000002692 162.0
YYD2_k127_4803249_6 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000006904 157.0
YYD2_k127_4803249_7 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000002267 150.0
YYD2_k127_4803249_8 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000002696 128.0
YYD2_k127_4803249_9 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000000001965 121.0
YYD2_k127_4812179_0 Methyltransferase type 11 K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000006983 254.0
YYD2_k127_4812179_1 Predicted permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005518 252.0
YYD2_k127_4812179_2 PFAM regulatory protein TetR - - - 0.00000000000000000000000001486 114.0
YYD2_k127_4823428_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 3.161e-202 636.0
YYD2_k127_4823428_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 579.0
YYD2_k127_4823428_2 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000001155 230.0
YYD2_k127_4823428_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000002905 201.0
YYD2_k127_4823428_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000004695 60.0
YYD2_k127_4857001_0 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005992 335.0
YYD2_k127_4857001_1 N-acetylglucosaminylinositol deacetylase activity - - - 0.000000000000000000000000000002688 135.0
YYD2_k127_4857001_2 GlcNAc-PI de-N-acetylase - - - 0.0000000001514 63.0
YYD2_k127_485852_0 ATPase associated with various cellular activities, AAA_5 K03696 - - 4.779e-311 959.0
YYD2_k127_485852_1 Anion-transporting ATPase K01551 - 3.6.3.16 5.04e-198 634.0
YYD2_k127_485852_10 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000003523 193.0
YYD2_k127_485852_11 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000007858 196.0
YYD2_k127_485852_12 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000000000000006281 184.0
YYD2_k127_485852_13 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000009675 160.0
YYD2_k127_485852_14 helix_turn_helix, Arsenical Resistance Operon Repressor K21903 - - 0.00000000000000000000000000000005764 130.0
YYD2_k127_485852_15 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.000000000000000000000000000008978 122.0
YYD2_k127_485852_16 Arsenical resistance operon trans-acting repressor ArsD - - - 0.00000000000000000000000197 106.0
YYD2_k127_485852_18 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000000000002044 98.0
YYD2_k127_485852_19 Conserved Protein - - - 0.00000000000000000009802 92.0
YYD2_k127_485852_2 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 604.0
YYD2_k127_485852_3 PFAM Bile acid sodium symporter K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 552.0
YYD2_k127_485852_4 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004986 411.0
YYD2_k127_485852_5 PFAM peptidase S58, DmpA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007211 351.0
YYD2_k127_485852_6 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 329.0
YYD2_k127_485852_7 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007073 309.0
YYD2_k127_485852_8 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001718 282.0
YYD2_k127_485852_9 lipid binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001024 260.0
YYD2_k127_4872802_0 - - - - 0.0000000000000000000000000000000000000000000002918 179.0
YYD2_k127_4872802_1 2-dehydropantoate 2-reductase activity K00077 - 1.1.1.169 0.000000000000000000000000000000000005507 141.0
YYD2_k127_4891084_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 1.84e-250 783.0
YYD2_k127_4891084_1 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 7.108e-202 634.0
YYD2_k127_4891084_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 420.0
YYD2_k127_4891084_3 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009566 415.0
YYD2_k127_4891084_4 PFAM Shikimate quinate 5-dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 357.0
YYD2_k127_4891084_5 molybdenum cofactor guanylyltransferase activity K03752,K13818 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000005686 216.0
YYD2_k127_4891084_6 Carotenoid biosynthesis protein - - - 0.0000000000000000000000000000000000000000006705 167.0
YYD2_k127_4891084_7 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.00000000000000000000000000000000000000002136 158.0
YYD2_k127_4891084_8 organic phosphonate transport K02044 - - 0.000000000000000000000000000000004229 143.0
YYD2_k127_4891084_9 Protein of unknown function (DUF4230) - - - 0.000000000000000000000000000003875 135.0
YYD2_k127_4903377_0 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008405 336.0
YYD2_k127_4903377_1 HhH-GPD family K03575 - - 0.000000000000000000000000000000000000002933 153.0
YYD2_k127_4922805_0 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 355.0
YYD2_k127_4922805_1 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 340.0
YYD2_k127_4922805_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 327.0
YYD2_k127_4922805_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000004844 149.0
YYD2_k127_4970250_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 1062.0
YYD2_k127_5012859_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 442.0
YYD2_k127_5012859_1 PFAM CBS domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 432.0
YYD2_k127_5012859_2 stress-induced mitochondrial fusion - - - 0.0000000000000000000000000000000000000000000000000000000000003266 216.0
YYD2_k127_501603_0 histidine kinase A domain protein - - - 0.0 1096.0
YYD2_k127_501603_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 547.0
YYD2_k127_501603_2 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001747 279.0
YYD2_k127_5022823_0 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 368.0
YYD2_k127_5022823_1 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 346.0
YYD2_k127_5022823_2 Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 0.0000000000000000000000000000000000000000000000000000005053 195.0
YYD2_k127_5022823_3 Sulfatase-modifying factor enzyme 1 K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000001374 179.0
YYD2_k127_5022823_5 PFAM HlyD family secretion protein K01993 - - 0.00000000008102 63.0
YYD2_k127_5094439_0 PFAM Thermolysin metallopeptidase, alpha-helical domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 476.0
YYD2_k127_5094439_1 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000001344 94.0
YYD2_k127_5121979_0 4-phosphoerythronate dehydrogenase activity K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 471.0
YYD2_k127_5121979_1 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007066 367.0
YYD2_k127_5121979_2 Protein of unknown function DUF115 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 360.0
YYD2_k127_5121979_3 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 315.0
YYD2_k127_5121979_4 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005145 267.0
YYD2_k127_5121979_5 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000363 242.0
YYD2_k127_5121979_6 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000006448 200.0
YYD2_k127_5121979_7 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000002312 93.0
YYD2_k127_5121979_8 Pfam:DUF2029 - - - 0.00000006881 64.0
YYD2_k127_5134091_0 PFAM membrane bound O-acyl transferase MBOAT family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006449 302.0
YYD2_k127_5134091_1 PFAM LmbE family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000003653 242.0
YYD2_k127_5134091_2 diguanylate cyclase K19707,K21088 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0016740,GO:0016772,GO:0016779,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0043900,GO:0043902,GO:0044093,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051171,GO:0051252,GO:0052621,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:1900190,GO:1900192,GO:1900231,GO:1900233,GO:1903506,GO:2000112,GO:2001141 2.7.7.65 0.0000000000000000000000000000000000000000000000000003295 202.0
YYD2_k127_5134091_3 single-species biofilm formation K01790,K03806,K06175 GO:0008150,GO:0009987,GO:0042710,GO:0044010,GO:0044764,GO:0051704 3.5.1.28,5.1.3.13,5.4.99.26 0.0000000000000000000000000006116 115.0
YYD2_k127_5134091_4 metallocarboxypeptidase activity K00368,K22348,K22349 - 1.16.3.3,1.7.2.1 0.000000000001641 79.0
YYD2_k127_5134091_5 TIGRFAM regulatory protein, FmdB - - - 0.0000001662 60.0
YYD2_k127_514403_0 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 505.0
YYD2_k127_514403_1 PFAM NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 449.0
YYD2_k127_514403_2 PFAM Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 355.0
YYD2_k127_514403_3 undecaprenyl-phosphate glucose phosphotransferase activity K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000008034 111.0
YYD2_k127_514403_4 Uncharacterised nucleotidyltransferase - - - 0.0000001072 59.0
YYD2_k127_514964_0 ErfK ybiS ycfS ynhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 342.0
YYD2_k127_514964_1 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009859 330.0
YYD2_k127_514964_2 Predicted membrane protein (DUF2085) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004846 295.0
YYD2_k127_514964_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008583 247.0
YYD2_k127_514964_4 PFAM phospholipase Carboxylesterase K06999 - - 0.000000000000000000000000000002337 130.0
YYD2_k127_514964_6 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000001433 58.0
YYD2_k127_5155629_0 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 349.0
YYD2_k127_5155629_1 nitrite transmembrane transporter activity K02532 - - 0.00000000000000000000000000000000000000000000000000000000003772 209.0
YYD2_k127_5155629_2 Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000000000008325 210.0
YYD2_k127_5155629_3 PFAM ABC transporter related K06158 - - 0.00000000000003847 73.0
YYD2_k127_5158083_0 Belongs to the GcvT family K19191 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006520,GO:0006575,GO:0006576,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008480,GO:0009056,GO:0009063,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016491,GO:0016645,GO:0019695,GO:0019752,GO:0019842,GO:0031406,GO:0031974,GO:0033218,GO:0034641,GO:0035999,GO:0036094,GO:0042133,GO:0042135,GO:0042219,GO:0042402,GO:0042426,GO:0042558,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046483,GO:0046653,GO:0046997,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0072341,GO:0097159,GO:0097164,GO:1901052,GO:1901053,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.5.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 594.0
YYD2_k127_5158083_1 Trimethylamine methyltransferase K14083 - 2.1.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 568.0
YYD2_k127_5158083_2 Rieske 2Fe-2S K00479 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 354.0
YYD2_k127_5158083_3 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00571,K00847,K00852 - 2.1.1.72,2.7.1.15,2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 313.0
YYD2_k127_5158083_4 DeoR C terminal sensor domain - - - 0.000000000000000000000000000000000000000000000000002538 192.0
YYD2_k127_5158083_5 - - - - 0.000000000000000000000000000000000000000000000007854 181.0
YYD2_k127_5158768_0 Putative carbohydrate binding domain K00702 - 2.4.1.20 0.0 1219.0
YYD2_k127_5158768_1 PFAM carbohydrate kinase K00854 - 2.7.1.17 8.175e-194 612.0
YYD2_k127_5158768_2 Glycosyl hydrolase family 1 K05350 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 504.0
YYD2_k127_5188873_0 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005942 369.0
YYD2_k127_5188873_1 ABC transporter K02056,K06400 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008558 295.0
YYD2_k127_5188873_2 CO dehydrogenase flavoprotein C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001546 273.0
YYD2_k127_5203606_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 3.272e-243 772.0
YYD2_k127_5203606_1 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 4.177e-225 706.0
YYD2_k127_5203606_10 Protein of unknown function (DUF2867) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 296.0
YYD2_k127_5203606_11 PFAM ABC transporter related K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003106 283.0
YYD2_k127_5203606_12 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008867 255.0
YYD2_k127_5203606_13 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000000001539 240.0
YYD2_k127_5203606_14 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000007591 240.0
YYD2_k127_5203606_15 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000001675 235.0
YYD2_k127_5203606_16 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000001171 231.0
YYD2_k127_5203606_17 - - - - 0.0000000000000000000001172 104.0
YYD2_k127_5203606_18 4fe-4S ferredoxin, iron-sulfur binding domain protein K03522,K05337 - - 0.000000000000000000001111 95.0
YYD2_k127_5203606_19 - - - - 0.000000000000001062 82.0
YYD2_k127_5203606_2 amino acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 559.0
YYD2_k127_5203606_3 Protein of unknown function (DUF2867) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009758 483.0
YYD2_k127_5203606_4 PFAM NMT1 THI5 like domain protein K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 401.0
YYD2_k127_5203606_5 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 391.0
YYD2_k127_5203606_6 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 322.0
YYD2_k127_5203606_7 PFAM ComEC Rec2-related protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 321.0
YYD2_k127_5203606_8 periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 299.0
YYD2_k127_5203606_9 PFAM binding-protein-dependent transport systems inner membrane component K02050 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 291.0
YYD2_k127_5207857_0 Aminotransferase class-III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008395 525.0
YYD2_k127_5207857_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 304.0
YYD2_k127_5207857_2 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000637 312.0
YYD2_k127_5207857_3 adenylate kinase activity K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000001409 179.0
YYD2_k127_5215073_0 ABC transporter substrate-binding protein PnrA-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009113 361.0
YYD2_k127_5215073_1 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000003376 240.0
YYD2_k127_5215073_2 PFAM ABC transporter K02056 - 3.6.3.17 0.000000000000000000000000000000000000000001944 157.0
YYD2_k127_5219912_0 heavy metal translocating P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 1.774e-280 880.0
YYD2_k127_5219912_1 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 355.0
YYD2_k127_5219912_10 PFAM bifunctional deaminase-reductase domain protein K14654 - 1.1.1.302 0.00000000000000000000000000000000000000000606 162.0
YYD2_k127_5219912_11 NUDIX domain K12944 - - 0.000000000000000000000000000000000000009105 149.0
YYD2_k127_5219912_12 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000000000000000000000000000002422 153.0
YYD2_k127_5219912_13 EamA-like transporter family - - - 0.00000000000000000000000000000002864 136.0
YYD2_k127_5219912_14 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000000000000000006728 130.0
YYD2_k127_5219912_15 KR domain - - - 0.00000000000000000000000001136 119.0
YYD2_k127_5219912_16 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.00000000000000000000000007061 115.0
YYD2_k127_5219912_17 Protein of unknown function with PCYCGC motif - - - 0.0000000000000000000000005336 109.0
YYD2_k127_5219912_18 Protein of unknown function (DUF3105) - - - 0.0000000000000008024 86.0
YYD2_k127_5219912_19 YHS domain - - - 0.0000000000002048 71.0
YYD2_k127_5219912_2 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 349.0
YYD2_k127_5219912_20 COG1622 Heme copper-type cytochrome quinol oxidases, subunit 2 K02275 - 1.9.3.1 0.0000000002663 72.0
YYD2_k127_5219912_21 pfam yhs - - - 0.0000000004574 61.0
YYD2_k127_5219912_22 Cytochrome c - - - 0.000000004462 68.0
YYD2_k127_5219912_23 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000139 52.0
YYD2_k127_5219912_3 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 339.0
YYD2_k127_5219912_4 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 331.0
YYD2_k127_5219912_5 PFAM Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 299.0
YYD2_k127_5219912_6 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000009131 214.0
YYD2_k127_5219912_7 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000001822 184.0
YYD2_k127_5219912_8 Predicted membrane protein (DUF2085) - - - 0.000000000000000000000000000000000000000000000001163 184.0
YYD2_k127_5219912_9 Histidine kinase K07777 - 2.7.13.3 0.00000000000000000000000000000000000000000000001116 185.0
YYD2_k127_5238192_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169,K03737 - 1.2.7.1 0.0 1765.0
YYD2_k127_5238192_1 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 438.0
YYD2_k127_5238192_2 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003831 285.0
YYD2_k127_5238192_3 - - - - 0.0000000004878 64.0
YYD2_k127_5238192_4 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0007647 44.0
YYD2_k127_5262048_0 Heat shock 70 kDa protein K04043 - - 3.839e-238 741.0
YYD2_k127_5262048_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009344 449.0
YYD2_k127_5262048_2 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 401.0
YYD2_k127_5262048_3 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000001128 153.0
YYD2_k127_5262746_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004231 570.0
YYD2_k127_5262746_1 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 460.0
YYD2_k127_5262746_2 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 370.0
YYD2_k127_5262746_3 Aminotransferase K00812,K10907 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000006846 241.0
YYD2_k127_5264090_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain - - - 8.292e-239 746.0
YYD2_k127_5264090_1 4Fe-4S binding domain - - - 9.04e-206 648.0
YYD2_k127_5264090_10 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000002715 162.0
YYD2_k127_5264090_11 EamA-like transporter family - - - 0.00000000000000000000000000006326 122.0
YYD2_k127_5264090_12 Dodecin K09165 - - 0.000000000000000000009227 93.0
YYD2_k127_5264090_13 YtkA-like - - - 0.0005396 50.0
YYD2_k127_5264090_2 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 586.0
YYD2_k127_5264090_3 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 372.0
YYD2_k127_5264090_4 PFAM WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 360.0
YYD2_k127_5264090_5 inositol 2-dehydrogenase activity K18431 - 2.7.7.82 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001546 268.0
YYD2_k127_5264090_6 Haloacid dehalogenase domain protein hydrolase - - - 0.00000000000000000000000000000000000000000000000000209 190.0
YYD2_k127_5264090_7 Domain of unknown function (DUF389) - - - 0.000000000000000000000000000000000000000000000002125 190.0
YYD2_k127_5264090_8 membrane-anchored protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000001234 185.0
YYD2_k127_5264090_9 Uncharacterised protein, DegV family COG1307 - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000007622 181.0
YYD2_k127_5275963_0 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002602 257.0
YYD2_k127_5275963_1 PFAM luciferase family protein - - - 0.000000000000000000000000000000000000000000000004523 176.0
YYD2_k127_5275963_2 PFAM thioesterase superfamily protein K07107 - - 0.0000000000000000000000000000000000000000000000622 172.0
YYD2_k127_5275963_3 creatininase K01470 - 3.5.2.10 0.00000000000000000000000003452 121.0
YYD2_k127_5275963_4 Two component regulator propeller - - - 0.000000000000000007906 97.0
YYD2_k127_5283390_0 GHMP kinases N terminal domain K01597 - 4.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 401.0
YYD2_k127_5314368_0 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 406.0
YYD2_k127_5314368_1 exodeoxyribonuclease I activity - - - 0.00000000000000000000000000000000000000000000000000000000000000053 223.0
YYD2_k127_5314368_2 Protein of unknown function (DUF3048) C-terminal domain - - - 0.0000000000000000000000000000000000002027 153.0
YYD2_k127_5344937_0 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 387.0
YYD2_k127_5344937_1 pyridine nucleotide-disulfide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 364.0
YYD2_k127_5344937_2 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000001759 224.0
YYD2_k127_5344937_3 enterobactin catabolic process K07214 - - 0.0000000000000000000000000000000000000000000000000001865 198.0
YYD2_k127_5344937_4 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000000002181 105.0
YYD2_k127_5344937_5 CarD family transcriptional regulator K07736 - - 0.0000000007342 67.0
YYD2_k127_535651_0 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 415.0
YYD2_k127_535651_1 lipid-A-disaccharide synthase activity K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 401.0
YYD2_k127_535651_2 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009031 329.0
YYD2_k127_535651_3 PFAM sulfotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002157 292.0
YYD2_k127_535651_4 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000516 223.0
YYD2_k127_5356965_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 331.0
YYD2_k127_5356965_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001887 275.0
YYD2_k127_5356965_2 ATPase AAA-2 domain protein K03696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008037 240.0
YYD2_k127_5356965_3 ATPase AAA-2 domain protein K03696 - - 0.000000000000000000000000000000000000001441 151.0
YYD2_k127_5356965_4 DinB superfamily - - - 0.0001533 51.0
YYD2_k127_53591_0 PFAM glycoside hydrolase, family 3 domain protein K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 410.0
YYD2_k127_53591_1 Domain of unknown function (DUF4380) - - - 0.00000000000000000000000000000000000000000000000000000000000000000009491 240.0
YYD2_k127_53591_2 PFAM carbohydrate kinase K00854 - 2.7.1.17 0.00000000000000000004218 91.0
YYD2_k127_5361374_0 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 303.0
YYD2_k127_5361374_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000002286 249.0
YYD2_k127_5361374_2 - - - - 0.0000000000000000000000000000000000000000002525 171.0
YYD2_k127_5361374_3 methyltransferase - - - 0.000000000000000000000000000000000000001284 154.0
YYD2_k127_5361374_4 transcription factor binding - - - 0.000000000000000000000000000000000000004264 149.0
YYD2_k127_5361374_5 PFAM Radical SAM domain protein K22227 - - 0.0000000000000000000007701 96.0
YYD2_k127_5361374_6 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.00000000005386 65.0
YYD2_k127_5374874_0 Lytic transglycosylase catalytic K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 488.0
YYD2_k127_5374874_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000009125 145.0
YYD2_k127_5374874_2 Belongs to the UPF0235 family K09131 - - 0.0000000000000000000000000000001195 126.0
YYD2_k127_5374874_3 YGGT family K02221 - - 0.000007611 51.0
YYD2_k127_5419205_1 PFAM Glycosyl transferase family 2 - - - 0.00005155 48.0
YYD2_k127_5419205_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.0004815 49.0
YYD2_k127_5422552_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 348.0
YYD2_k127_5422552_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002097 280.0
YYD2_k127_5422552_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000008228 267.0
YYD2_k127_5422552_3 PFAM glycoside hydrolase, family 1 K05350 - 3.2.1.21 0.00000000000000000000000000000000000001757 145.0
YYD2_k127_5434218_0 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 415.0
YYD2_k127_5434218_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 379.0
YYD2_k127_5434218_2 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001234 259.0
YYD2_k127_5457131_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 3.356e-280 885.0
YYD2_k127_5457131_1 PFAM Biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 300.0
YYD2_k127_5457131_10 Parallel beta-helix repeats - - - 0.0000000000000000007372 104.0
YYD2_k127_5457131_11 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000000000002532 89.0
YYD2_k127_5457131_12 - - - - 0.0000000000004545 73.0
YYD2_k127_5457131_2 O-methyltransferase activity K00545 - 2.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006797 295.0
YYD2_k127_5457131_3 Belongs to the ompA family K20276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008618 295.0
YYD2_k127_5457131_4 Phage Tail Collar Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003888 226.0
YYD2_k127_5457131_5 Phage Tail Collar Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000009451 226.0
YYD2_k127_5457131_6 Phage Tail Collar Domain - - - 0.000000000000000000000000000000000000000000000000000000000000001773 222.0
YYD2_k127_5457131_7 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000002793 217.0
YYD2_k127_5457131_8 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000002574 183.0
YYD2_k127_5457131_9 FR47-like protein - - - 0.00000000000000000000000000000000000000000000214 170.0
YYD2_k127_5463137_0 LUD domain K18929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 368.0
YYD2_k127_5463137_1 - - - - 0.0000000000000000000000000000000000001448 154.0
YYD2_k127_5471540_0 PFAM ABC-3 protein K09816,K09819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 362.0
YYD2_k127_5471540_1 PFAM peptidase M1, membrane alanine aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004944 347.0
YYD2_k127_5471540_2 PFAM peptidase M1, membrane alanine aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 344.0
YYD2_k127_5471540_3 PFAM ABC transporter related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001301 256.0
YYD2_k127_5471540_4 2 iron, 2 sulfur cluster binding - - - 0.000000000000000000000000000002609 124.0
YYD2_k127_5471540_5 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.0000000000000000000000000002863 115.0
YYD2_k127_548410_0 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III domain protein K01641 - 2.3.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 524.0
YYD2_k127_548410_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 451.0
YYD2_k127_548410_2 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 376.0
YYD2_k127_548410_3 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000000000000000000000000000000000000000000000002394 219.0
YYD2_k127_5487772_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 7.889e-240 760.0
YYD2_k127_5487772_1 PFAM cytoplasmic peptidoglycan synthetase domain protein K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 391.0
YYD2_k127_5492426_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 500.0
YYD2_k127_5492426_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001269 278.0
YYD2_k127_5492426_2 Protein of unknown function (DUF2905) - - - 0.0000000000001616 72.0
YYD2_k127_5492426_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000003311 63.0
YYD2_k127_5492945_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1153.0
YYD2_k127_5492945_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 5.347e-308 976.0
YYD2_k127_5492945_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000006229 126.0
YYD2_k127_5492945_11 Transcriptional regulator - - - 0.000008012 50.0
YYD2_k127_5492945_2 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 1.073e-217 685.0
YYD2_k127_5492945_3 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 4.069e-216 691.0
YYD2_k127_5492945_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 507.0
YYD2_k127_5492945_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007754 400.0
YYD2_k127_5492945_6 PFAM Adenosine AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009381 391.0
YYD2_k127_5492945_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000275 264.0
YYD2_k127_5492945_8 ATP synthesis coupled electron transport K00336 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009405,GO:0010941,GO:0016020,GO:0016491,GO:0016651,GO:0030312,GO:0033668,GO:0035821,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044464,GO:0044531,GO:0044532,GO:0048037,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051536,GO:0051540,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0055114,GO:0060548,GO:0065007,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001648 264.0
YYD2_k127_5492945_9 Belongs to the complex I subunit 6 family K00339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000006878 142.0
YYD2_k127_5511133_0 Creatinase/Prolidase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 522.0
YYD2_k127_5511133_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K04088,K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 306.0
YYD2_k127_5511133_2 light absorption K07255,K21700 - - 0.000000000000000000000000000000000000000000004017 169.0
YYD2_k127_5511133_3 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000001149 156.0
YYD2_k127_5511133_4 - K07004 - - 0.0000000000000000000000000000000000115 156.0
YYD2_k127_5511133_5 transmembrane transport K02035,K15580 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006810,GO:0006811,GO:0006820,GO:0006857,GO:0006869,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010876,GO:0015711,GO:0015718,GO:0015721,GO:0015833,GO:0015849,GO:0015850,GO:0030288,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0042277,GO:0042597,GO:0042886,GO:0042939,GO:0044464,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0061077,GO:0071702,GO:0071705,GO:1900750 - 0.00000000000000000000000000000347 131.0
YYD2_k127_5511133_6 Belongs to the TPP enzyme family K07004 - - 0.00000000000000000000001122 117.0
YYD2_k127_5514116_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2140.0
YYD2_k127_5514116_1 PFAM glycosyl transferase, family 51 - - - 0.0 1163.0
YYD2_k127_5514116_2 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004996 302.0
YYD2_k127_5514116_4 MaoC like domain - - - 0.00000000000000000000000000000000001034 141.0
YYD2_k127_5514116_5 sh3 domain protein K01448,K04771,K08884 - 2.7.11.1,3.4.21.107,3.5.1.28 0.00006275 53.0
YYD2_k127_5518308_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 461.0
YYD2_k127_5518308_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 GO:0000270,GO:0000271,GO:0003674,GO:0003824,GO:0003977,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006629,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0030203,GO:0033692,GO:0034637,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 419.0
YYD2_k127_5518308_2 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000009211 153.0
YYD2_k127_5518308_3 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K00756,K01489 - 2.4.2.2,3.5.4.5 0.0005948 42.0
YYD2_k127_5524216_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 2.116e-306 945.0
YYD2_k127_5524216_1 transcriptional regulator, Rrf2 family - - - 0.000000000000000000000000000000000000000000000000000000557 196.0
YYD2_k127_5524216_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000002127 198.0
YYD2_k127_5524216_3 - - - - 0.000000000000000000009578 106.0
YYD2_k127_5524216_4 membrane - - - 0.000003686 51.0
YYD2_k127_5593884_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 599.0
YYD2_k127_5593884_1 TIGRFAM cysteine desulfurase family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 521.0
YYD2_k127_5593884_2 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 517.0
YYD2_k127_5593884_3 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 518.0
YYD2_k127_5593884_4 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000000004284 207.0
YYD2_k127_5593884_5 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000192 178.0
YYD2_k127_5644887_0 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006992 426.0
YYD2_k127_5644887_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 372.0
YYD2_k127_5644887_2 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000003109 199.0
YYD2_k127_5644887_3 ferredoxin-NADP+ reductase activity - - - 0.000000000000000000000000000000000000000000001875 171.0
YYD2_k127_5644887_4 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000001665 102.0
YYD2_k127_5644887_5 PHP domain protein K07053 - 3.1.3.97 0.0000000000000000000002763 102.0
YYD2_k127_5644887_6 4Fe-4S dicluster domain - - - 0.0000000000008578 71.0
YYD2_k127_5655439_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 333.0
YYD2_k127_5655439_1 PFAM histidine triad (HIT) protein K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000002302 183.0
YYD2_k127_5655439_2 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.00000000007463 72.0
YYD2_k127_5658737_0 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K03802,K05844 - 6.3.2.29,6.3.2.30 0.000000000000000000000000000000000000000000000000000000001368 211.0
YYD2_k127_5658737_1 Peptidyl-prolyl cis-trans isomerase K01802,K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000008491 171.0
YYD2_k127_5658737_2 transcriptional regulator - - - 0.0000000000000000000000000000000000000000006114 164.0
YYD2_k127_5658737_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000009293 141.0
YYD2_k127_5696611_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 2.503e-194 617.0
YYD2_k127_5696611_1 COG0318, Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 503.0
YYD2_k127_5696611_10 - - - - 0.00000000000001319 81.0
YYD2_k127_5696611_11 lipolytic protein G-D-S-L family - - - 0.00000003361 65.0
YYD2_k127_5696611_12 Phosphopantetheine attachment site - - - 0.00003364 50.0
YYD2_k127_5696611_2 Periplasmic copper-binding protein (NosD) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 306.0
YYD2_k127_5696611_4 D-isomer specific 2-hydroxyacid dehydrogenase K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000008727 263.0
YYD2_k127_5696611_5 membrane protein involved in D-alanine K19294 - - 0.0000000000000000000000000000000000000000000000000000000001504 222.0
YYD2_k127_5696611_6 Acyl-transferase - - - 0.000000000000000000000000000000017 139.0
YYD2_k127_5696611_7 domain, Protein - - - 0.000000000000000000000000000004116 134.0
YYD2_k127_5696611_8 iron-sulfur cluster assembly - - - 0.0000000000000000000000001704 106.0
YYD2_k127_5696611_9 - - - - 0.00000000000000000001084 100.0
YYD2_k127_5727005_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 335.0
YYD2_k127_5727005_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001961 306.0
YYD2_k127_5727005_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000002482 175.0
YYD2_k127_5727005_3 PFAM Formylglycine-generating sulfatase enzyme K12132 - 2.7.11.1 0.000001195 57.0
YYD2_k127_5756646_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0 1227.0
YYD2_k127_5756646_1 Ferrous iron transport protein B C terminus K04759 - - 0.000000000000000000000000000000000000000000000000000000001663 203.0
YYD2_k127_5756646_2 Patatin-like phospholipase K14676 - 3.1.1.5 0.0005997 43.0
YYD2_k127_5772846_0 PFAM CobQ CobB MinD ParA nucleotide binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 307.0
YYD2_k127_5772846_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000005061 190.0
YYD2_k127_5772846_2 helix_turn_helix, cAMP Regulatory protein K10914 GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - 0.00000000000000000000001425 109.0
YYD2_k127_5772846_3 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.00000000000000000000002052 116.0
YYD2_k127_5772846_5 - - - - 0.000000000001081 72.0
YYD2_k127_5772846_6 Protease prsW family - - - 0.000000000001391 79.0
YYD2_k127_5780742_0 amine dehydrogenase activity K15864 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1,1.7.99.1 1.595e-320 1000.0
YYD2_k127_5780742_1 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004132 385.0
YYD2_k127_5780742_10 Membrane-bound dehydrogenase domain protein - - - 0.0002085 55.0
YYD2_k127_5780742_2 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001853 266.0
YYD2_k127_5780742_3 Histidine kinase K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000004091 269.0
YYD2_k127_5780742_4 Transcriptional regulatory protein, C terminal K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001557 251.0
YYD2_k127_5780742_5 Cyclic nucleotide-monophosphate binding domain K21564 - - 0.00000000000000000000000000000000000000000000007684 178.0
YYD2_k127_5780742_6 META domain K03668 - - 0.00000000000003564 78.0
YYD2_k127_5780742_8 Domain of unknown function (DUF1858) - - - 0.00000002557 59.0
YYD2_k127_5780742_9 Sulfatase-modifying factor enzyme 1 - - - 0.0000691 53.0
YYD2_k127_5794295_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 4.621e-201 636.0
YYD2_k127_5794295_1 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 586.0
YYD2_k127_5794295_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007956 479.0
YYD2_k127_5794295_3 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 419.0
YYD2_k127_5794295_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000009913 241.0
YYD2_k127_5794295_5 PFAM class II aldolase adducin family protein K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000957 179.0
YYD2_k127_5794295_6 Thioesterase superfamily K18700 - 3.1.2.29 0.00000000000000000000000000000000001291 139.0
YYD2_k127_5794295_7 MBOAT, membrane-bound O-acyltransferase family - - - 0.00000000000000000000000000001078 125.0
YYD2_k127_5794295_8 - - - - 0.000000000000005081 79.0
YYD2_k127_5794295_9 23S rRNA-intervening sequence protein - - - 0.0000000004131 65.0
YYD2_k127_5883604_0 N-acetylglucosaminylinositol deacetylase activity K22135 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000904 280.0
YYD2_k127_5883604_1 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001786 251.0
YYD2_k127_5883604_2 Serine threonine protein kinase K08884 - 2.7.11.1 0.000000000000000000000000000000000000000003417 158.0
YYD2_k127_588442_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000003251 187.0
YYD2_k127_588442_1 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000159 104.0
YYD2_k127_588442_2 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000001424 76.0
YYD2_k127_588442_3 Esterase PHB depolymerase - - - 0.000000000004624 78.0
YYD2_k127_588442_4 Esterase PHB depolymerase - - - 0.00000000001657 72.0
YYD2_k127_5895455_0 Belongs to the proline racemase family K12658 - 5.1.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 393.0
YYD2_k127_5895455_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000002478 201.0
YYD2_k127_5895455_2 acid dehydrogenase K00285 - 1.4.5.1 0.00000001415 57.0
YYD2_k127_5916530_0 PFAM magnesium chelatase ChlI subunit K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 517.0
YYD2_k127_5916530_1 PFAM MOFRL domain protein K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005683 310.0
YYD2_k127_5916530_2 ABC-type protease lipase transport system, ATPase and permease K06148 - - 0.00000000000000718 76.0
YYD2_k127_5926623_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.182e-203 655.0
YYD2_k127_5926623_1 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 511.0
YYD2_k127_5926623_2 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000913 447.0
YYD2_k127_5926623_3 NUBPL iron-transfer P-loop NTPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007879 369.0
YYD2_k127_5926623_4 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004797 361.0
YYD2_k127_5926623_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000006565 105.0
YYD2_k127_5934719_0 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 409.0
YYD2_k127_5934719_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 387.0
YYD2_k127_5934719_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001264 250.0
YYD2_k127_593538_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 372.0
YYD2_k127_593538_1 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.00000000000000000000000000000001311 146.0
YYD2_k127_5983378_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000774 526.0
YYD2_k127_5983378_1 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 381.0
YYD2_k127_5983378_2 Iron permease FTR1 family K07243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000719 240.0
YYD2_k127_5983378_3 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000373 193.0
YYD2_k127_5983378_4 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000036 138.0
YYD2_k127_6034175_0 PFAM amidohydrolase K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008049 492.0
YYD2_k127_6034175_1 PFAM amine oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 393.0
YYD2_k127_6036657_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 613.0
YYD2_k127_6036657_1 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002337 282.0
YYD2_k127_6036657_2 sigma-70 region 2 domain protein K03088 - - 0.0000000000000000000000000000000000000000000000000001406 192.0
YYD2_k127_6036657_3 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.0000000000000000000000000000000000000000000000000001455 200.0
YYD2_k127_6036657_4 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000006816 82.0
YYD2_k127_6106627_0 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000000000000000000000000005035 127.0
YYD2_k127_6106627_1 Alpha amylase, catalytic domain - - - 0.000000000000000000000000002763 118.0
YYD2_k127_6106627_2 protein conserved in bacteria - - - 0.0000000000000000000000004278 107.0
YYD2_k127_6106627_3 protein containing double-stranded beta helix domain - - - 0.000000000000001225 89.0
YYD2_k127_6106627_4 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000001268 65.0
YYD2_k127_6115885_0 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004655 494.0
YYD2_k127_6115885_1 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 437.0
YYD2_k127_6115885_11 - - - - 0.0004377 51.0
YYD2_k127_6115885_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 373.0
YYD2_k127_6115885_3 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006508 364.0
YYD2_k127_6115885_4 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 312.0
YYD2_k127_6115885_5 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 318.0
YYD2_k127_6115885_6 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000003485 144.0
YYD2_k127_6115885_7 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000002144 144.0
YYD2_k127_6115885_8 PFAM secretion protein HlyD family protein - - - 0.0000000000000000000000000005764 123.0
YYD2_k127_6115885_9 PFAM secretion protein HlyD family protein - - - 0.000000000000000000000000007887 120.0
YYD2_k127_6158042_0 Radical_SAM C-terminal domain K07739 - 2.3.1.48 1.449e-228 719.0
YYD2_k127_6158042_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 439.0
YYD2_k127_6158042_2 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 315.0
YYD2_k127_6158042_3 methyltransferase activity K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000000000000000004956 222.0
YYD2_k127_6158042_4 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000004089 198.0
YYD2_k127_6158042_5 Chromate transporter K07240 - - 0.00000000000000001626 89.0
YYD2_k127_6158042_6 COG2059 Chromate transport protein ChrA K07240 - - 0.0000000006049 68.0
YYD2_k127_6158042_8 PFAM UspA domain protein - - - 0.0000002419 61.0
YYD2_k127_6158844_0 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000128 228.0
YYD2_k127_6158844_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000006859 175.0
YYD2_k127_6158844_2 WD domain, G-beta repeat - - - 0.0000000002259 67.0
YYD2_k127_6164139_0 FGGY family of carbohydrate kinases, N-terminal domain - - - 8.068e-242 756.0
YYD2_k127_6164139_1 COG0277 FAD FMN-containing dehydrogenases K00803 - 2.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003812 582.0
YYD2_k127_6164139_10 - - - - 0.0000000000000000000000000000000000000000000000000002887 202.0
YYD2_k127_6164139_11 Transcriptional regulator K03603,K05799,K22104 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006355,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0019395,GO:0019752,GO:0030258,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032787,GO:0032991,GO:0032993,GO:0034440,GO:0042304,GO:0043436,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045723,GO:0045833,GO:0045834,GO:0045892,GO:0045893,GO:0045923,GO:0045934,GO:0045935,GO:0045936,GO:0046889,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051252,GO:0051253,GO:0051254,GO:0055114,GO:0060255,GO:0062012,GO:0062013,GO:0065007,GO:0071071,GO:0071072,GO:0071704,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1903725,GO:1903726,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000006652 192.0
YYD2_k127_6164139_12 deoxyhypusine monooxygenase activity K03301 - - 0.0000000000000000000000000000000000000000000000008317 201.0
YYD2_k127_6164139_13 Blue (Type 1) copper domain protein - - - 0.000000000000000000000000008184 113.0
YYD2_k127_6164139_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 567.0
YYD2_k127_6164139_3 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 528.0
YYD2_k127_6164139_4 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 503.0
YYD2_k127_6164139_5 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 455.0
YYD2_k127_6164139_6 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 418.0
YYD2_k127_6164139_7 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009687 346.0
YYD2_k127_6164139_8 transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007781 324.0
YYD2_k127_6164139_9 iron dependent repressor K03709 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006192 303.0
YYD2_k127_6182404_0 Amino acid permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 338.0
YYD2_k127_6182404_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 285.0
YYD2_k127_6182404_2 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000008336 128.0
YYD2_k127_6182404_3 Acyl-transferase K00655,K00945 - 2.3.1.51,2.7.4.25 0.00000000000000000000003358 108.0
YYD2_k127_6182404_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000001301 68.0
YYD2_k127_618321_0 Helicase conserved C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 467.0
YYD2_k127_618321_1 FAD linked oxidase domain protein K00103,K16653 GO:0000271,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010383,GO:0016020,GO:0016051,GO:0031221,GO:0033692,GO:0034637,GO:0034645,GO:0035884,GO:0040007,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0070589,GO:0070592,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901576 1.1.3.8,1.1.98.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 444.0
YYD2_k127_618321_2 PFAM diacylglycerol kinase catalytic region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 324.0
YYD2_k127_618321_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K16652 - 1.1.1.333 0.0000000000000000000000000000000000000000000000000000005715 202.0
YYD2_k127_618321_4 diguanylate cyclase - - - 0.00000000000000000000000000000000000000007265 166.0
YYD2_k127_619057_0 ABC transporter related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 560.0
YYD2_k127_619057_1 PFAM Fumarate lyase K01744 - 4.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 439.0
YYD2_k127_619057_10 antibiotic catabolic process - - - 0.0002798 45.0
YYD2_k127_619057_2 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 388.0
YYD2_k127_619057_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02484,K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 376.0
YYD2_k127_619057_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007086 358.0
YYD2_k127_619057_5 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004659 319.0
YYD2_k127_619057_6 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 324.0
YYD2_k127_619057_7 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 312.0
YYD2_k127_619057_8 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000004992 238.0
YYD2_k127_619057_9 metallocarboxypeptidase activity K14054 - - 0.000000000000000000002321 106.0
YYD2_k127_6196904_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 1.396e-209 670.0
YYD2_k127_6196904_1 TIGRFAM primosome, DnaD subunit - - - 0.000002355 56.0
YYD2_k127_6212953_0 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 530.0
YYD2_k127_6212953_1 Belongs to the carbamoyltransferase HypF family K04656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 489.0
YYD2_k127_6212953_2 hydrogenase expression formation protein HypE K04655 - - 0.000000000000000000000000000000000000000000000000000000000000001399 223.0
YYD2_k127_6212953_3 Transposase K07491 - - 0.000000000000000000000000000000000000000000000003472 178.0
YYD2_k127_6212953_4 Hydrogenase expression formation protein K04653 - - 0.000000000000000000000001714 104.0
YYD2_k127_623400_0 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000018 224.0
YYD2_k127_623400_1 - - - - 0.0001275 53.0
YYD2_k127_6242803_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.425e-298 924.0
YYD2_k127_6242803_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000001003 237.0
YYD2_k127_6242803_2 lipid binding - - - 0.0000000000000000000000000000000000000000000000000000000000000001982 228.0
YYD2_k127_6264759_0 PFAM cobalamin (vitamin B12) biosynthesis CbiM protein K02007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 376.0
YYD2_k127_6264759_1 ABC transporter K02006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006455 314.0
YYD2_k127_6264759_2 ATPase associated with various cellular activities, AAA_5 K03696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004971 250.0
YYD2_k127_6264759_3 TIGRFAM polymorphic outer membrane protein K21449 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003122 265.0
YYD2_k127_6264759_4 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004845 245.0
YYD2_k127_6264759_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000002093 241.0
YYD2_k127_6264759_6 TIGRFAM polymorphic outer membrane protein K21449 - - 0.000000000000000000000000000000000000001514 158.0
YYD2_k127_6264759_7 ATPase associated with various cellular activities, AAA_5 K03696 - - 0.00000000000000000000000000001439 121.0
YYD2_k127_6278849_0 Required for morphogenesis under gluconeogenic growth conditions - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 537.0
YYD2_k127_6278849_1 PFAM ROK family protein K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005425 331.0
YYD2_k127_630971_0 transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004652 554.0
YYD2_k127_630971_1 MFS/sugar transport protein K03292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003845 283.0
YYD2_k127_630971_2 VIT family - - - 0.00000000000000000000000000000003915 135.0
YYD2_k127_630971_3 transcriptional regulator K21903 - - 0.0000000000000000000036 96.0
YYD2_k127_630971_4 - - - - 0.0000000000000000001856 98.0
YYD2_k127_630971_5 Ergosterol biosynthesis ERG4/ERG24 family - - - 0.0000000000000000004447 97.0
YYD2_k127_630971_6 - - - - 0.0000000000009902 70.0
YYD2_k127_6317012_0 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 314.0
YYD2_k127_6317012_1 protein-(glutamine-N5) methyltransferase activity - - - 0.0000000000000000000001099 106.0
YYD2_k127_6317012_2 - - - - 0.00001787 54.0
YYD2_k127_6317012_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00002753 52.0
YYD2_k127_6317012_4 Cobalt transport protein K16785 - - 0.0004651 51.0
YYD2_k127_6325555_0 PFAM regulator of chromosome condensation, RCC1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008542 391.0
YYD2_k127_6325555_1 NMT1/THI5 like - - - 0.0000000000000000000000000000000000000000000000000001492 197.0
YYD2_k127_6325555_2 40-residue YVTN family beta-propeller repeat - - - 0.00003793 54.0
YYD2_k127_6329243_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 413.0
YYD2_k127_6329243_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000484 257.0
YYD2_k127_6329243_2 PFAM Roadblock LC7 family protein K07131 - - 0.00000000000000000000000000000000000000000000002305 173.0
YYD2_k127_6329243_3 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000001858 149.0
YYD2_k127_6329243_4 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000002216 106.0
YYD2_k127_6335600_0 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 409.0
YYD2_k127_6335600_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001143 274.0
YYD2_k127_6335600_2 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000004941 159.0
YYD2_k127_6335600_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.00000000000000000000000000000004586 127.0
YYD2_k127_6337774_0 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 462.0
YYD2_k127_6337774_1 LysM domain K03046,K03641,K08642 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 424.0
YYD2_k127_6337774_2 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004326 284.0
YYD2_k127_6337774_3 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000416 147.0
YYD2_k127_6337774_4 Histidine kinase K00936,K02030,K21084 - 2.7.13.3,2.7.7.65 0.00000002576 66.0
YYD2_k127_6360889_0 introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX K03404,K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008496 438.0
YYD2_k127_6360889_1 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 409.0
YYD2_k127_6360889_2 PFAM RNA binding S1 domain protein K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 379.0
YYD2_k127_6384455_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 420.0
YYD2_k127_6384455_1 PFAM MOFRL domain protein K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 388.0
YYD2_k127_6384455_2 phosphorelay signal transduction system - - - 0.000000000000000000000000000008475 126.0
YYD2_k127_6384455_3 - - - - 0.000000000837 64.0
YYD2_k127_640552_0 dolichyl monophosphate biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003875 273.0
YYD2_k127_640552_1 Bacterial Ig-like domain (group 1) - - - 0.00000000002908 77.0
YYD2_k127_640552_2 - - - - 0.00000000008766 72.0
YYD2_k127_640552_3 Bacterial Ig-like domain (group 1) - - - 0.00000006852 66.0
YYD2_k127_640552_4 - - - - 0.00002933 56.0
YYD2_k127_640552_5 Signal peptide protein, YSIRK family K01206 - 3.2.1.51 0.0003668 53.0
YYD2_k127_6429441_0 PFAM fumarate lyase K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 598.0
YYD2_k127_6429441_1 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000002057 218.0
YYD2_k127_646117_0 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 297.0
YYD2_k127_646117_1 PBS lyase HEAT domain protein repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001848 269.0
YYD2_k127_646117_2 PFAM Auxin Efflux Carrier K07088 - - 0.00000000000000000000000000000000000000000001601 173.0
YYD2_k127_646117_3 SMART PDZ DHR GLGF domain protein K11749 - - 0.00000000000000000000000000176 116.0
YYD2_k127_646117_4 PFAM acylphosphatase K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.000000000000000001188 88.0
YYD2_k127_655648_0 WD40-like Beta Propeller Repeat - - - 0.000000000002184 76.0
YYD2_k127_670641_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006714 439.0
YYD2_k127_670641_1 Cation efflux family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008854 257.0
YYD2_k127_670641_2 TIGRFAM polymorphic outer membrane protein K21449 - - 0.0000000000000000000000000000000000000000000000000000000002404 225.0
YYD2_k127_670641_3 cellular response to dsDNA K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000001129 204.0
YYD2_k127_670641_4 HD domain - - - 0.00000000000000000000000000000000000000000000000000000162 202.0
YYD2_k127_670641_5 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000003259 183.0
YYD2_k127_670641_6 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase - - - 0.000000000000000000000000000000000000000000089 174.0
YYD2_k127_670641_7 Transposase - - - 0.0000001658 55.0
YYD2_k127_670641_8 phosphorelay sensor kinase activity K03406,K07675,K13598 - 2.7.13.3 0.00001194 56.0
YYD2_k127_707284_0 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008686 334.0
YYD2_k127_707284_1 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005723 249.0
YYD2_k127_707284_2 signal transduction histidine kinase K11623 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000001572 218.0
YYD2_k127_707284_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000001027 163.0
YYD2_k127_707284_4 Transport permease protein K01992 - - 0.000000000000002834 88.0
YYD2_k127_70981_0 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 577.0
YYD2_k127_70981_1 Peptidase family S41 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000076 392.0
YYD2_k127_70981_2 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000000000009496 192.0
YYD2_k127_749104_0 NurA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004299 259.0
YYD2_k127_749104_2 Domain of unknown function DUF87 K06915 - - 0.0000000000000000000000000000000000000000000000000000002998 199.0
YYD2_k127_749104_3 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000004049 143.0
YYD2_k127_762402_0 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 533.0
YYD2_k127_762402_1 iron ion homeostasis K02055 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 429.0
YYD2_k127_762402_10 PFAM ThiJ PfpI domain protein K05520 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000000006222 237.0
YYD2_k127_762402_12 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.00000000000000000000000000002664 123.0
YYD2_k127_762402_13 - - - - 0.0000000000000000003095 93.0
YYD2_k127_762402_14 Transglycosylase SLT domain - - - 0.000000006595 66.0
YYD2_k127_762402_15 - - - - 0.0002915 50.0
YYD2_k127_762402_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 427.0
YYD2_k127_762402_3 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 430.0
YYD2_k127_762402_4 PFAM binding-protein-dependent transport systems inner membrane component K02054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 370.0
YYD2_k127_762402_5 metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 362.0
YYD2_k127_762402_6 Two component transcriptional regulator, winged helix family K07669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 305.0
YYD2_k127_762402_7 DNA import into cell involved in transformation K02053 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007496 304.0
YYD2_k127_762402_8 Aldo Keto reductase K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004297 269.0
YYD2_k127_762402_9 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002085 254.0
YYD2_k127_765371_0 Two component regulator propeller K00936 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 572.0
YYD2_k127_765371_1 PFAM binding-protein-dependent transport systems inner membrane component K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 354.0
YYD2_k127_765371_2 helix_turn _helix lactose operon repressor K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 331.0
YYD2_k127_765371_3 Binding-protein-dependent transport system inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001186 276.0
YYD2_k127_765371_4 PFAM glycoside hydrolase, family 1 K05350 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000004138 261.0
YYD2_k127_765371_5 ABC transporter substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000001211 196.0
YYD2_k127_81643_1 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004879 316.0
YYD2_k127_81643_2 Dihydroorotate dehydrogenase K00226,K00254 - 1.3.5.2,1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006332 313.0
YYD2_k127_81643_3 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000009482 143.0
YYD2_k127_81643_5 Ethyl tert-butyl ether degradation - - - 0.00000005765 59.0
YYD2_k127_864510_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 349.0
YYD2_k127_864510_1 Transcriptional regulatory protein, C terminal K07658 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 306.0
YYD2_k127_864510_2 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000004337 161.0
YYD2_k127_864510_3 Transcriptional regulator - - - 0.0002364 52.0
YYD2_k127_867556_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1063.0
YYD2_k127_867556_1 stress-induced mitochondrial fusion - - - 6.389e-265 830.0
YYD2_k127_867556_10 negative regulation of transcription, DNA-templated K10947 - - 0.000000000000000000000000000000726 125.0
YYD2_k127_867556_11 alcohol dehydrogenase - - - 0.00000000000000434 87.0
YYD2_k127_867556_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 501.0
YYD2_k127_867556_3 TIGRFAM metal dependent phophohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 299.0
YYD2_k127_867556_4 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003037 255.0
YYD2_k127_867556_5 acyl-phosphate glycerol-3-phosphate acyltransferase activity K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000181 201.0
YYD2_k127_867556_8 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000001866 146.0
YYD2_k127_867556_9 histidine kinase A domain protein - - - 0.00000000000000000000000000000003273 139.0
YYD2_k127_883906_0 SMART PUA domain containing protein K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 456.0
YYD2_k127_883906_1 Winged helix DNA-binding domain K09927 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 364.0
YYD2_k127_883906_2 - - - - 0.00000000000000000000000000000000000000000000000000000005379 201.0
YYD2_k127_883906_3 membrane K07149 - - 0.00000000000000000000000000000000001123 147.0
YYD2_k127_883906_4 Protein of unknown function (DUF3788) - - - 0.0000000000000000000000000002226 120.0
YYD2_k127_883906_5 PAP2 superfamily - - - 0.0000000000009634 76.0
YYD2_k127_886550_0 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005938 354.0
YYD2_k127_886550_1 Orotidine-5-phosphate decarboxylase orotate phosphoribosyltransferase K01591,K13421 - 2.4.2.10,4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000002953 223.0
YYD2_k127_886550_2 'de novo' UMP biosynthetic process K00762,K01591,K13421,K15334 GO:0003674,GO:0003824,GO:0004588,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019856,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046131,GO:0046132,GO:0046134,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.1.1.202,2.4.2.10,4.1.1.23 0.000000000000000000000000000000000000000000000000000000000003414 214.0
YYD2_k127_886550_3 Domain of unknown function (DUF1905) - - - 0.0000000000000000000000000000000000004122 147.0
YYD2_k127_886550_4 Belongs to the Nudix hydrolase family - - - 0.00001183 49.0
YYD2_k127_902729_0 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 372.0
YYD2_k127_902729_1 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 340.0
YYD2_k127_902729_2 4Fe-4S binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001721 261.0
YYD2_k127_902729_3 Ergosterol biosynthesis ERG4/ERG24 family - - - 0.0000000000000000000000000000000000000000000000000001774 191.0
YYD2_k127_902729_4 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000009862 148.0
YYD2_k127_902729_5 Thiamine-binding protein - - - 0.000000000000000000000000000000005295 130.0
YYD2_k127_902729_6 PFAM Glycoside hydrolase, family 38 K01191 - 3.2.1.24 0.0004623 46.0
YYD2_k127_918932_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000003172 212.0
YYD2_k127_918932_1 Cyclic nucleotide-monophosphate binding domain K09766 - - 0.000000000000000001378 94.0
YYD2_k127_918932_2 - - - - 0.0000000000007089 77.0
YYD2_k127_927999_0 Nickel-dependent hydrogenase K15830 - - 3.437e-277 863.0
YYD2_k127_927999_1 NADH Ubiquinone plastoquinone (Complex I) K00342,K05568,K12137 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 590.0
YYD2_k127_927999_10 2 iron, 2 sulfur cluster binding K00334 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000000000000000005961 180.0
YYD2_k127_927999_11 Ferredoxin K00335,K17992 - 1.12.1.3,1.6.5.3 0.000000000000000000000000121 110.0
YYD2_k127_927999_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K18331 - 1.12.1.3,1.6.5.3 0.0000000000001102 75.0
YYD2_k127_927999_13 Pas domain - - - 0.000000002262 70.0
YYD2_k127_927999_2 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K12139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006649 554.0
YYD2_k127_927999_3 to Hydrogenase-4 component F of Bacteria UniRef RepID HYFF_ECOLI K12141 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0033554,GO:0044425,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 551.0
YYD2_k127_927999_4 NADH dehydrogenase K12138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000899 328.0
YYD2_k127_927999_5 response regulator, receiver K02479 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001531 253.0
YYD2_k127_927999_6 hydrogenase 4 membrane K12140 - - 0.000000000000000000000000000000000000000000000000000000000000005924 224.0
YYD2_k127_927999_7 4Fe-4S dicluster domain K12143 - - 0.00000000000000000000000000000000000000000000000000000000000002282 220.0
YYD2_k127_927999_8 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.00000000000000000000000000000000000000000000000000001223 198.0
YYD2_k127_927999_9 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000005607 200.0
YYD2_k127_937947_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 503.0
YYD2_k127_937947_1 WD40 domain protein beta Propeller K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 506.0
YYD2_k127_937947_2 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 434.0
YYD2_k127_937947_3 heme binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009228 348.0
YYD2_k127_937947_4 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004674 268.0
YYD2_k127_937947_5 ParB-like nuclease domain - - - 0.00000000000008083 81.0
YYD2_k127_946474_0 Endoribonuclease that initiates mRNA decay K18682 - - 1.485e-207 656.0
YYD2_k127_946474_1 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000396 194.0
YYD2_k127_946474_2 histidine kinase A domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000007478 199.0
YYD2_k127_946474_3 Modulates RecA activity K03565 - - 0.000000000000000000000000000000000000000124 158.0
YYD2_k127_946474_4 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000007673 76.0
YYD2_k127_952591_0 Molydopterin dinucleotide binding domain - - - 1.978e-216 694.0
YYD2_k127_952591_1 PFAM Polysulphide reductase, NrfD K00185 - - 8.318e-200 634.0
YYD2_k127_952591_2 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 437.0
YYD2_k127_952591_3 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 359.0
YYD2_k127_952591_4 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000004706 207.0
YYD2_k127_952591_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000002116 162.0
YYD2_k127_952591_6 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000000001068 152.0
YYD2_k127_952591_7 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K08738 - - 0.0001814 51.0
YYD2_k127_962584_0 choline dehydrogenase activity K03333 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016614,GO:0016899,GO:0016995,GO:0044419,GO:0051704,GO:0055114 1.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 588.0
YYD2_k127_962584_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000008031 243.0
YYD2_k127_962584_2 cellulose binding - - - 0.0000000000000000000000000000000000000000000001943 183.0
YYD2_k127_962584_3 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000002395 173.0
YYD2_k127_962584_4 cellular response to heat K09807 - - 0.00000000000000000000000000001904 125.0
YYD2_k127_973091_0 Stage II sporulation E family protein - - - 1.06e-228 746.0
YYD2_k127_973091_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000961 280.0
YYD2_k127_973091_2 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000002729 158.0
YYD2_k127_973091_3 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.000000000000000000000000000000000000007324 148.0
YYD2_k127_973091_4 sigma factor antagonist activity K04757,K17752 - 2.7.11.1 0.0000000000000000000000000008277 117.0
YYD2_k127_973091_5 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000000006871 88.0
YYD2_k127_973091_6 - - - - 0.0001414 51.0
YYD2_k127_985033_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 2.568e-314 979.0
YYD2_k127_985033_1 MFS_1 like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 373.0
YYD2_k127_985033_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000001473 232.0
YYD2_k127_985033_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000001082 198.0
YYD2_k127_985033_4 Aminoglycoside-2''-adenylyltransferase K19545 - - 0.0000000000000000000000000000000000000000002284 162.0
YYD2_k127_985033_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000001537 119.0
YYD2_k127_985033_6 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000002879 112.0
YYD2_k127_985033_7 PFAM ABC transporter K01990 - - 0.00000002486 56.0