logo

Overview

ID MAG04632
Name YYD2_bin.11
Sample SMP0125
Taxonomy
Kingdom Archaea
Phylum Thermoproteota
Class Nitrososphaeria
Order Nitrososphaerales
Family Nitrososphaeraceae
Genus TH1177
Species TH1177 sp035706205
Assembly information
Completeness (%) 84.46
Contamination (%) 1.62
GC content (%) 28.0
N50 (bp) 2,967
Genome size (bp) 2,251,750

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1958

Gene name Description KEGG GOs EC E-value Score Sequence
YYD2_k127_1000624_0 Transposase DDE domain K07492 - - 0.000000000000000000000000000000003833 134.0
YYD2_k127_1000624_1 This gene contains a nucleotide ambiguity which may be the result of a sequencing error - - - 0.00000000000000000007335 93.0
YYD2_k127_1028289_0 Thg1 C terminal domain - - - 0.00000000000000000009802 92.0
YYD2_k127_1044354_0 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 388.0
YYD2_k127_1044354_1 Amino acid kinase family K00928 - 2.7.2.4 0.000000000000000000176 90.0
YYD2_k127_1045741_0 COG0798 Arsenite efflux pump ACR3 and related permeases K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 423.0
YYD2_k127_1045741_1 Pirin C-terminal cupin domain K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 395.0
YYD2_k127_1045741_2 Antibiotic biosynthesis monooxygenase K09932 - - 0.00000000000000000000000000000000000000000000000002638 186.0
YYD2_k127_1045741_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000002964 143.0
YYD2_k127_1045741_4 Winged helix-turn-helix DNA-binding - - - 0.000000000000000000000000000000003426 134.0
YYD2_k127_1045741_5 Universal stress protein - - - 0.0000000000000000000000009538 111.0
YYD2_k127_1045741_6 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000000000000000003026 108.0
YYD2_k127_1046329_0 Catalyzes the synthesis of activated sulfate K00860,K07028 - 2.7.1.25 0.000000000000000000003954 100.0
YYD2_k127_1049572_0 - - - - 0.0000000000000000000000000003588 126.0
YYD2_k127_105061_0 COG0530 Ca2 Na antiporter K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007247 406.0
YYD2_k127_105061_1 Binds directly to 23S rRNA. Probably involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 292.0
YYD2_k127_1060867_0 IMP dehydrogenase activity - - - 0.000000001435 59.0
YYD2_k127_1082806_0 - - - - 0.00000000000000000000000000000000000000000000000003762 185.0
YYD2_k127_1082806_1 Belongs to the class-I aminoacyl-tRNA synthetase family - - - 0.00000000000000000000000000000000001433 136.0
YYD2_k127_1082806_2 zinc-ribbon domain - - - 0.000000000000000000000000000005335 123.0
YYD2_k127_109058_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000504 347.0
YYD2_k127_109058_1 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 347.0
YYD2_k127_109058_2 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000002565 133.0
YYD2_k127_1099543_0 triphosphatase activity K18446 - 3.6.1.25 0.000000000005462 75.0
YYD2_k127_111663_0 CBS domain K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 409.0
YYD2_k127_1137354_0 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 361.0
YYD2_k127_1175066_0 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009405 351.0
YYD2_k127_1175066_1 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000009676 124.0
YYD2_k127_1179525_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.00000001183 63.0
YYD2_k127_1204976_0 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.1.21.7 0.00000000000000000000000000000000000000000000000000000009375 202.0
YYD2_k127_1204976_1 - - - - 0.000000000000000000004107 94.0
YYD2_k127_1215436_0 - - - - 0.000000000000000000000001104 106.0
YYD2_k127_1215436_1 4Fe-4S binding domain K00338 - 1.6.5.3 0.00000000000006619 72.0
YYD2_k127_1227060_0 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 393.0
YYD2_k127_1233699_0 Periplasmic protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 570.0
YYD2_k127_1233699_1 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000002884 191.0
YYD2_k127_1235180_0 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008235 536.0
YYD2_k127_1235180_1 PHP-associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 405.0
YYD2_k127_1235180_2 tRNA methyltransferase complex GCD14 subunit K07442 - 2.1.1.219,2.1.1.220 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008824 364.0
YYD2_k127_1235180_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000478 274.0
YYD2_k127_1235180_4 Universal stress protein - - - 0.0001665 45.0
YYD2_k127_1235843_0 Protein of unknown function (DUF763) K09003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 448.0
YYD2_k127_1236786_0 Arsenical pump membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 325.0
YYD2_k127_1236786_1 CBS domain K03498 - - 0.00000000000000000000000000000003881 128.0
YYD2_k127_1266484_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01870 - 6.1.1.5 9.041e-249 779.0
YYD2_k127_1273905_0 Translation initiation factor K03238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002458 245.0
YYD2_k127_1273905_1 Thioredoxin K03671 - - 0.000000000000000000000000000000000000000000008483 166.0
YYD2_k127_1275347_0 FAD linked - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 495.0
YYD2_k127_1275347_1 - - - - 0.000000000004938 72.0
YYD2_k127_1283288_0 - - - - 0.0000000000000000000000000001978 120.0
YYD2_k127_1283288_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0001425 47.0
YYD2_k127_1289103_0 Phosphate uptake regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 355.0
YYD2_k127_1289103_1 binding-protein-dependent transport systems inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000001337 243.0
YYD2_k127_1290682_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0002061 44.0
YYD2_k127_1291295_0 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 422.0
YYD2_k127_1291295_1 - - - - 0.00000000000000000000000000007466 123.0
YYD2_k127_1291295_2 - - - - 0.0002817 44.0
YYD2_k127_1303283_0 Bacterial Fe(2+) trafficking - - - 0.000000000000000000000000001634 113.0
YYD2_k127_1303283_1 type I secretion target repeat protein - - - 0.0000000000000009384 81.0
YYD2_k127_1303283_2 - - - - 0.00000000000002008 79.0
YYD2_k127_1325249_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K09759 - 6.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 572.0
YYD2_k127_1325249_1 Type III restriction enzyme, res subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005766 458.0
YYD2_k127_1325249_2 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000002727 228.0
YYD2_k127_1325249_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000008247 51.0
YYD2_k127_1325249_4 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00001591 47.0
YYD2_k127_1332266_0 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.0000000000000000001051 94.0
YYD2_k127_1332717_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007501 531.0
YYD2_k127_1332717_1 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) K05967 - - 0.0000000000000000000000000000002202 124.0
YYD2_k127_1332717_2 - - - - 0.000000000000000005651 87.0
YYD2_k127_1342764_0 acid phosphatase activity K22390 - - 0.00000000000004485 83.0
YYD2_k127_1352608_0 UV-endonuclease UvdE - - - 0.0000000000008281 70.0
YYD2_k127_1356619_0 Diphthamide biosynthesis K07561 - 2.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006447 480.0
YYD2_k127_1356619_1 PP-loop family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007006 382.0
YYD2_k127_1356619_2 Pterin binding enzyme K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 293.0
YYD2_k127_1359480_0 - - - - 0.000000000000000000000000000000001739 134.0
YYD2_k127_135969_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 398.0
YYD2_k127_1361854_0 Arsenite-activated ATPase ArsA K01551,K13993 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 339.0
YYD2_k127_1361854_1 Protein of unknown function (DUF541) K09807 - - 0.000000000000000000000000000000000000000008072 163.0
YYD2_k127_1361854_2 FAD dependent oxidoreductase - - - 0.00000000000000000000000009389 110.0
YYD2_k127_1362015_0 Oxidoreductase family, NAD-binding Rossmann fold K18855 - 1.1.1.374 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832 412.0
YYD2_k127_1362015_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 331.0
YYD2_k127_1362015_2 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009045 250.0
YYD2_k127_1362015_3 Trm112p-like protein - - - 0.000000000000000000000005111 106.0
YYD2_k127_1376879_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.000000000000000000000000000000000000000000000000000002713 201.0
YYD2_k127_1376879_1 CHRD domain - - - 0.000000000000000000000004167 108.0
YYD2_k127_1376879_2 TonB-dependent receptor K02014 - - 0.0000000000000000001766 91.0
YYD2_k127_1376879_3 response regulator, receiver - - - 0.0000000028 63.0
YYD2_k127_1376879_4 - - - - 0.000000003677 65.0
YYD2_k127_1380639_0 - - - - 0.000000000002635 73.0
YYD2_k127_1384867_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000002915 209.0
YYD2_k127_1384867_1 - - - - 0.000000000000000000000000000000008085 138.0
YYD2_k127_1387222_0 Histidine kinase - - - 0.000000000000001244 86.0
YYD2_k127_1387222_1 - - - - 0.000000002886 62.0
YYD2_k127_138737_0 MOFRL family K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003251 293.0
YYD2_k127_138737_1 Biotin protein ligase C terminal domain K03524 - 6.3.4.15 0.0000000000000000000000000000000000000009747 158.0
YYD2_k127_1393582_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 437.0
YYD2_k127_139542_0 DEAD/H associated K03724 - - 0.0 1198.0
YYD2_k127_139542_1 Thiamine biosynthesis protein (ThiI) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 457.0
YYD2_k127_139542_2 - - - - 0.000001704 52.0
YYD2_k127_1401123_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007374 259.0
YYD2_k127_1401123_1 - - - - 0.000000000000000000000000072 115.0
YYD2_k127_1401243_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 316.0
YYD2_k127_1401243_1 Tetratricopeptide repeat - - - 0.00002731 51.0
YYD2_k127_1404849_0 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.0000000000000000000000001018 107.0
YYD2_k127_1409079_0 PFAM DNA methylase N-4 N-6 domain protein K00571 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 316.0
YYD2_k127_1409079_1 - - - - 0.0000000000000000000000000006425 118.0
YYD2_k127_1409857_0 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K20989 - - 0.00000000000000000000000000009347 121.0
YYD2_k127_1409857_1 Thiamine-binding protein - - - 0.0004207 45.0
YYD2_k127_1415943_0 - - - - 0.00000000000000000000000000000000000007321 145.0
YYD2_k127_1415943_1 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000001782 89.0
YYD2_k127_1417894_0 Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.0000000000000000000000000000000000006732 144.0
YYD2_k127_1431067_1 metal-binding protein - - - 0.00005796 52.0
YYD2_k127_1431385_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 591.0
YYD2_k127_1431385_1 Phenylalanyl-tRNA synthetase alpha subunit K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000004447 170.0
YYD2_k127_1431385_2 - - - - 0.000000000000000000000000000001035 126.0
YYD2_k127_1431385_3 Cytidylyltransferase-like K02201 - 2.7.7.3 0.000000000000000000000001124 107.0
YYD2_k127_1431385_4 - - - - 0.0000000000005289 72.0
YYD2_k127_143635_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 546.0
YYD2_k127_143635_1 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000001268 106.0
YYD2_k127_143635_2 Prokaryotic homologs of the JAB domain - - - 0.0000000002485 67.0
YYD2_k127_1464442_0 HMGL-like K01649 - 2.3.3.13 1.188e-218 683.0
YYD2_k127_1464442_1 Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily K05829 - - 2.505e-199 623.0
YYD2_k127_1464442_10 lysine biosynthesis protein LysW K05826 - - 0.00000000000000000000007406 98.0
YYD2_k127_1464442_11 lysine biosynthesis protein LysW K05826 - - 0.0000000000000000000004834 96.0
YYD2_k127_1464442_12 PFAM GvpD gas vesicle - - - 0.000000000000000003284 93.0
YYD2_k127_1464442_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K05830 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007982 599.0
YYD2_k127_1464442_3 Catalyzes the release of L-lysine from LysW -gamma-L- lysine and the release of L-ornithine from LysW -L-ornithine K05831 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007508 563.0
YYD2_k127_1464442_4 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008132 496.0
YYD2_k127_1464442_5 Lysine biosynthesis K05827 - 6.3.2.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004642 412.0
YYD2_k127_1464442_6 Involved in both the arginine and lysine biosynthetic pathways. Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis) K05828 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 397.0
YYD2_k127_1464442_7 Lysine biosynthesis K05827 - 6.3.2.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 384.0
YYD2_k127_1464442_8 diphthine synthase K20215 - 2.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 369.0
YYD2_k127_1464442_9 helix_turn_helix ASNC type - - - 0.00000000000000000000000000000000000000224 151.0
YYD2_k127_1466386_0 Transglutaminase/protease-like homologues K01456 - 3.5.1.52 0.00000000000000000000000002781 117.0
YYD2_k127_1470700_0 Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs K11131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005392 443.0
YYD2_k127_1470700_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006432 341.0
YYD2_k127_1470700_2 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001084 270.0
YYD2_k127_1470700_3 Belongs to the cytidylate kinase family. Type 2 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000001561 211.0
YYD2_k127_1470700_4 Belongs to the archaeal adenylate kinase family K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000004424 184.0
YYD2_k127_148464_0 Tellurite resistance protein TehB - - - 0.0000000007917 63.0
YYD2_k127_1496161_0 AAA family ATPase, CDC48 subfamily K13525 - - 0.00000000000000844 76.0
YYD2_k127_1522282_0 Archaeal TRASH domain - - - 0.0000000000000000009032 90.0
YYD2_k127_1522282_1 PFAM TM2 domain containing protein K03686 - - 0.0000000000001769 77.0
YYD2_k127_1526121_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 528.0
YYD2_k127_1528959_0 Phosphoesterase family K01114 - 3.1.4.3 0.00000000000000000000000000000000000000000000000000005034 210.0
YYD2_k127_1528959_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000002817 79.0
YYD2_k127_1530510_0 - - - - 0.000000000000000000000005406 108.0
YYD2_k127_1530510_1 - - - - 0.00000000000004285 79.0
YYD2_k127_1531866_0 DNA/RNA non-specific endonuclease K01173 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 340.0
YYD2_k127_1535851_0 CBS domain K03498 - - 0.00000000000000000000002092 107.0
YYD2_k127_1538132_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 473.0
YYD2_k127_1538132_1 Universal stress protein - - - 0.0000000000000007696 82.0
YYD2_k127_1539662_0 - - - - 0.0000005062 57.0
YYD2_k127_1539875_0 ABC-type antimicrobial peptide transport system, ATPase component K02003,K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 305.0
YYD2_k127_1539875_1 extracellular matrix structural constituent - - - 0.00000000000000000000000000000000000000000002812 177.0
YYD2_k127_1552828_0 - - - - 0.0000000000000000000000001204 106.0
YYD2_k127_1552828_2 Protein of unknown function DUF72 - - - 0.000004603 53.0
YYD2_k127_1555277_0 - - - - 0.00000000000000000000000000000000000000001139 155.0
YYD2_k127_1555277_1 COG1522 Transcriptional regulators - - - 0.000000000000000000000001389 104.0
YYD2_k127_1556164_0 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 328.0
YYD2_k127_1556164_1 flavodoxin nitric oxide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003 240.0
YYD2_k127_1557450_0 -transport system K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 300.0
YYD2_k127_1557450_1 transmembrane transport K02025,K05814,K10109,K10189,K15771,K17245,K17316 - - 0.0000000000000000000000006317 106.0
YYD2_k127_1574786_0 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 594.0
YYD2_k127_1574786_1 DEAD DEAH box helicase K06877 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 587.0
YYD2_k127_1574786_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 292.0
YYD2_k127_1574786_3 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000000000000000000000000000006454 163.0
YYD2_k127_1574786_4 PPIC-type PPIASE domain K07533 - 5.2.1.8 0.0000000000000000000000000000000000000005579 149.0
YYD2_k127_1574786_5 - - - - 0.000000000000000000000000000000000004077 145.0
YYD2_k127_15786_0 CoA binding domain K06929 - - 0.000000000000000000000000000000000000000000000000000006082 193.0
YYD2_k127_15786_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000003742 61.0
YYD2_k127_1583628_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000003923 237.0
YYD2_k127_1583628_1 - - - - 0.0000000000000000000000000000000000000004637 158.0
YYD2_k127_1585208_0 Amino acid kinase family K06981 - 2.7.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003857 271.0
YYD2_k127_1585208_1 Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)-mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids K00869 - 2.7.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000002087 259.0
YYD2_k127_1585208_2 Belongs to the MEMO1 family K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000009583 237.0
YYD2_k127_1585208_3 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000001103 106.0
YYD2_k127_1587159_0 endonuclease activity - - - 0.000000000000001066 78.0
YYD2_k127_1587159_1 ThiS family K03636 - - 0.000000002068 59.0
YYD2_k127_1590976_0 PFAM MscS Mechanosensitive ion channel - - - 0.000000000006001 74.0
YYD2_k127_1590976_1 Belongs to the small heat shock protein (HSP20) family K06335,K13993 GO:0001666,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016310,GO:0019538,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0036293,GO:0036294,GO:0040007,GO:0040008,GO:0042221,GO:0042594,GO:0043170,GO:0043207,GO:0043412,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045926,GO:0046777,GO:0048519,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0065007,GO:0070482,GO:0070887,GO:0071453,GO:0071456,GO:0071496,GO:0071704,GO:0071944,GO:0075136,GO:1901564 - 0.00007901 46.0
YYD2_k127_160295_0 - - - - 0.0000000000000000000000000000000000000000000000003533 183.0
YYD2_k127_1604589_0 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000047 280.0
YYD2_k127_16083_0 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 535.0
YYD2_k127_16083_1 Tetrapyrrole (Corrin/Porphyrin) Methylases K05936 - 2.1.1.133,2.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 379.0
YYD2_k127_16083_2 Tetrapyrrole (Corrin/Porphyrin) Methylases K03394 - 2.1.1.130,2.1.1.151 0.0000000000000000000000000000000000000000000000000000000000000000000000004738 253.0
YYD2_k127_16083_3 Catalyzes the methylation of C-15 in cobalt-precorrin-6B followed by the decarboxylation of C-12 to form cobalt-precorrin- 7 K02191 - 2.1.1.196 0.0000000000000000000000000000000000000000000000000000000000000000000001346 243.0
YYD2_k127_16083_4 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000000000000162 170.0
YYD2_k127_16083_5 - - - - 0.000000000000001323 80.0
YYD2_k127_16083_6 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.000000000002196 67.0
YYD2_k127_1625556_1 TIGRFAM Mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000005097 143.0
YYD2_k127_1625556_2 - - - - 0.000000000000000000000001242 113.0
YYD2_k127_1625556_5 Concanavalin A-like lectin/glucanases superfamily - - - 0.00004647 53.0
YYD2_k127_1631838_0 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process K22278 - 3.5.1.104 0.00000000461 58.0
YYD2_k127_1631838_1 Protein of unknown function (DUF1211) - - - 0.00005964 49.0
YYD2_k127_16455_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 547.0
YYD2_k127_16455_1 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 353.0
YYD2_k127_16455_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03058 - 2.7.7.6 0.00000000000000000000000000000000007891 134.0
YYD2_k127_16455_3 Belongs to the MEMO1 family K06990 - - 0.0000000006523 62.0
YYD2_k127_164799_0 oligoendopeptidase F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 428.0
YYD2_k127_164799_1 May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity K06965 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005866 403.0
YYD2_k127_164799_2 - - - - 0.00000000000000000000000000000000000000000000000001034 183.0
YYD2_k127_164799_3 - - - - 0.000000000000000000000000000000001046 132.0
YYD2_k127_164799_4 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000008018 115.0
YYD2_k127_1662409_0 Involved in regulation of DNA replication K10725 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 446.0
YYD2_k127_1662409_1 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02323 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007963 353.0
YYD2_k127_1664808_0 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000008242 229.0
YYD2_k127_1664808_1 snRNP Sm proteins K04796 - - 0.0000000000000000000000000000000009691 130.0
YYD2_k127_1664808_2 Formyl transferase K01433 - 3.5.1.10 0.000000000000000000000000000001717 121.0
YYD2_k127_1664808_3 Binds to the 23S rRNA K02922 - - 0.000000001639 58.0
YYD2_k127_1670819_0 Protein involved in ribosomal biogenesis, contains PUA domain K07565 - - 0.00000000000000000000000000000002015 132.0
YYD2_k127_1670819_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family - - - 0.000000000000000000001193 96.0
YYD2_k127_1675796_0 ferredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 456.0
YYD2_k127_1675796_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 400.0
YYD2_k127_1675796_2 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002064 274.0
YYD2_k127_1675796_3 methanogenesis marker protein 1 K09136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007115 242.0
YYD2_k127_1675796_4 Ribosomal protein L15E K02877 - - 0.000000000000000000000000000000000000000000000000000000000000000001098 230.0
YYD2_k127_1675796_5 PFAM TfuA domain protein, core - - - 0.0000000000000000000000000000000000000000000000000000000000000001419 227.0
YYD2_k127_1675796_6 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.000000000000000000000000000000000000000006766 160.0
YYD2_k127_1675796_7 - - - - 0.00000000000000000000000001879 113.0
YYD2_k127_1686864_0 pyridine nucleotide-disulphide oxidoreductase dimerisation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 363.0
YYD2_k127_1686864_1 Multicopper oxidase K00368 - 1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004642 314.0
YYD2_k127_1693782_0 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 487.0
YYD2_k127_1693782_1 - - - - 0.000000000000000000000000000000000003851 143.0
YYD2_k127_1700629_0 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 330.0
YYD2_k127_1700629_1 Protein of unknown function (DUF2795) - - - 0.00000000000000000000000000000000000000000000000000009794 196.0
YYD2_k127_1700629_2 Carboxypeptidase regulatory-like domain K18235 - - 0.0000000000000000000000000000004559 124.0
YYD2_k127_1717215_0 Domain of unknown function (DUF1297) K06863 - 6.3.4.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008755 517.0
YYD2_k127_1717215_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006547 473.0
YYD2_k127_1717215_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000001675 249.0
YYD2_k127_1717215_3 hydrolase (HAD superfamily) K01091,K01560,K01561,K07025 - 3.1.3.18,3.8.1.2,3.8.1.3 0.00000000000000000000000000000000000000000000000000000000001737 213.0
YYD2_k127_1717215_4 - - - - 0.00000000000000000000000000000000000003228 145.0
YYD2_k127_1717215_5 - - - - 0.00000000000000000000000002375 111.0
YYD2_k127_1717215_6 mttA/Hcf106 family K03116 - - 0.0000000000000000000000001864 113.0
YYD2_k127_1717215_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0003371 47.0
YYD2_k127_1798172_0 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 503.0
YYD2_k127_1799922_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006237 248.0
YYD2_k127_1805294_1 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.00000000000000005561 83.0
YYD2_k127_1807152_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1033.0
YYD2_k127_1808223_0 Protein of unknown function DUF99 K09120 - - 0.0000000000000000000000000000000000000000000000000000004739 198.0
YYD2_k127_1808651_0 Acyl CoA acetate 3-ketoacid CoA transferase K01026 - 2.8.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 614.0
YYD2_k127_1808651_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000005289 136.0
YYD2_k127_1813774_0 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005961 606.0
YYD2_k127_1830150_0 AAA domain K07028 - - 0.0000000000000000000000000006174 118.0
YYD2_k127_1830150_1 AAA domain K07028 - - 0.0000000000000000000003225 102.0
YYD2_k127_1831700_0 Sodium hydrogen exchanger K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007934 447.0
YYD2_k127_1831700_1 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008749 394.0
YYD2_k127_1831700_2 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 341.0
YYD2_k127_1831700_3 PFAM Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000001634 188.0
YYD2_k127_1831700_4 - - - - 0.000000000000000000000000000000000001461 143.0
YYD2_k127_1831700_5 - - - - 0.000000000000000000000001682 103.0
YYD2_k127_18391_0 Phosphate uptake regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009926 403.0
YYD2_k127_1845393_0 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000863 276.0
YYD2_k127_1845393_1 HIT domain K02503 - - 0.0000000000000000000000000000000000000000000000001835 181.0
YYD2_k127_1845393_2 phosphatase homologous to the C-terminal domain of histone macroH2A1 K07478 - - 0.000000000000000000000000000000003092 132.0
YYD2_k127_1852700_0 - - - - 0.00000000000000000000000000000003545 128.0
YYD2_k127_1858017_0 ABC-type transport system, periplasmic component surface lipoprotein K02058,K07335 - - 0.000000000000000000000000000000000000000000000003864 178.0
YYD2_k127_1867722_0 segregation and condensation protein K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000002197 236.0
YYD2_k127_1867722_1 chromosome segregation and condensation protein ScpA K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000001098 234.0
YYD2_k127_1867722_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03014 - - 0.00000000000000000000000000113 116.0
YYD2_k127_1867722_3 Ribosomal protein S8e K02995 - - 0.0000007245 51.0
YYD2_k127_1874720_0 - - - - 0.00000008907 55.0
YYD2_k127_1876992_0 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.000000000001518 72.0
YYD2_k127_1876992_1 ASCH domain - - - 0.000000000001636 70.0
YYD2_k127_1878301_0 TIGRFAM poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 - - 0.00000000000000000000000000000000000000000001043 167.0
YYD2_k127_1878301_1 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) - - - 0.00000000001454 72.0
YYD2_k127_1878301_2 - - - - 0.0000003074 56.0
YYD2_k127_1897369_0 PFAM transposase, IS4 family protein - - - 0.000000000003044 74.0
YYD2_k127_1899092_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 487.0
YYD2_k127_1899092_1 Peptidase dimerisation domain - - - 0.00000000021 63.0
YYD2_k127_1901250_0 Sodium/calcium exchanger protein K07300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003741 280.0
YYD2_k127_1904085_0 Haemolysin-type calcium binding protein related domain K01406 - 3.4.24.40 0.00000000000000602 85.0
YYD2_k127_1904085_1 Animal haem peroxidase - - - 0.0000002026 59.0
YYD2_k127_1914396_0 Purple acid Phosphatase, N-terminal domain - - - 0.000000000000000001055 100.0
YYD2_k127_1929235_0 Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 K03243 - - 1.318e-241 756.0
YYD2_k127_1929235_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000007594 200.0
YYD2_k127_1929235_2 Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H ACA, box C D and box C' D' sRNAs K02936 - - 0.00000000000000000000000000000000000000000000000000001838 190.0
YYD2_k127_1929235_3 Belongs to the eukaryotic ribosomal protein eS28 family K02979 - - 0.000000000000000000000000000002345 120.0
YYD2_k127_1929235_4 Binds to the 23S rRNA K02896 - - 0.000000000000000000000000000003384 120.0
YYD2_k127_1941225_0 fumarate reductase flavoprotein K00239 - 1.3.5.1,1.3.5.4 3.247e-313 965.0
YYD2_k127_1941225_1 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 455.0
YYD2_k127_1941225_2 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007372 374.0
YYD2_k127_1941225_3 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.0000000000000000000000000000000000000000000000000000000000000000002738 233.0
YYD2_k127_1941225_4 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.00000000000000000000000000000000000000009141 154.0
YYD2_k127_1941225_5 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000000000000002926 116.0
YYD2_k127_1941225_7 Iron-sulfur cluster assembly protein - - - 0.00000000000000000000006871 99.0
YYD2_k127_1941225_8 Thioredoxin K03671 - - 0.00000000002151 64.0
YYD2_k127_1962343_0 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002605 250.0
YYD2_k127_1962343_1 COG0607 Rhodanese-related sulfurtransferase - - - 0.000000000000001567 81.0
YYD2_k127_1966856_0 Belongs to the peptidase M50B family - GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 - 0.0000000000000000000000000000000001446 134.0
YYD2_k127_1966856_1 ChaB K06197 - - 0.000000000000007306 78.0
YYD2_k127_1966901_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 294.0
YYD2_k127_1971575_0 Involved in the catabolism of quinolinic acid (QA) K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000002613 227.0
YYD2_k127_1971575_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000145 217.0
YYD2_k127_1971575_2 Ribosomal protein S30 K02983 - - 0.00000000000000000006798 91.0
YYD2_k127_1986728_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 615.0
YYD2_k127_1986728_1 - - - - 0.000000000000000000000000000000000000000000003062 171.0
YYD2_k127_1986728_2 Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6- hydroxymethyl-7,8-dihydropterin diphosphate (6-HMDP) K07142 - 2.7.6.3 0.0001178 46.0
YYD2_k127_199247_0 Belongs to the peptidase M10A family K08002 - - 0.000001785 57.0
YYD2_k127_199247_1 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0009538 45.0
YYD2_k127_2020281_0 FAD dependent oxidoreductase K15736 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 443.0
YYD2_k127_2020281_1 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K07558 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 339.0
YYD2_k127_2020281_2 Ser thr protein kinase K07176 - - 0.000000000000000000000000000000000000000000003592 173.0
YYD2_k127_2020281_3 - - - - 0.0000000000000000000000000000000002153 134.0
YYD2_k127_2020281_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000049 110.0
YYD2_k127_2021915_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000001473 232.0
YYD2_k127_2021915_1 ABC-type transport system, periplasmic component surface lipoprotein K02058,K07335 - - 0.000000000001937 69.0
YYD2_k127_2022226_0 Cache domain - - - 0.00000006584 62.0
YYD2_k127_202396_0 Amidohydrolase family K01464 - 3.5.2.2 0.0000000000000000000000000000000000000000000000000000000000003598 221.0
YYD2_k127_2024750_0 BNR Asp-box repeat K01186 - 3.2.1.18 0.00000000003804 74.0
YYD2_k127_202652_0 - - - - 0.0000000000000000000000000000008391 126.0
YYD2_k127_202652_1 - - - - 0.00000000000000003675 85.0
YYD2_k127_2026892_0 Binds the lower part of the 30S subunit head K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008322 304.0
YYD2_k127_2026892_1 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001011 252.0
YYD2_k127_2026892_10 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03538 GO:0000172,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005732,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030677,GO:0032991,GO:0033204,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.0000000005059 63.0
YYD2_k127_2026892_2 Belongs to the eukaryotic ribosomal protein eS4 family K02987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003315 253.0
YYD2_k127_2026892_3 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009328 247.0
YYD2_k127_2026892_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000238 230.0
YYD2_k127_2026892_5 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000000000000000000000001944 157.0
YYD2_k127_2026892_6 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000006708 121.0
YYD2_k127_2026892_7 ribosomal protein S14 K02954 - - 0.0000000000000000000000000004263 113.0
YYD2_k127_2026892_8 Located at the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000003401 113.0
YYD2_k127_2026892_9 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000000000000000007198 88.0
YYD2_k127_2036923_0 SMC proteins Flexible Hinge Domain K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007447 411.0
YYD2_k127_2036923_1 PFAM tRNA synthetases class I (C) catalytic domain K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000002368 267.0
YYD2_k127_2036923_2 Acetyltransferase (GNAT) family - - - 0.000000000003462 77.0
YYD2_k127_2053133_0 aspartate carbamoyltransferase K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 477.0
YYD2_k127_2053133_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 362.0
YYD2_k127_2053133_2 Sua5 YciO YrdC YwlC family K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000004152 179.0
YYD2_k127_2053133_3 THUMP domain K06963 - - 0.0000000000000000000000000000000000005426 146.0
YYD2_k127_2078931_0 cation diffusion facilitator family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008295 333.0
YYD2_k127_2090265_0 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 0.00000000000001808 81.0
YYD2_k127_2090265_1 Histidine kinase - - - 0.0000000000003948 75.0
YYD2_k127_2091279_0 phosphatase 2C K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000748 175.0
YYD2_k127_2093730_0 PFAM periplasmic copper-binding - - - 0.0000000000000000000001145 111.0
YYD2_k127_2098953_0 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 GO:0000150,GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0000730,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0033554,GO:0034622,GO:0034641,GO:0042148,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0045003,GO:0046483,GO:0050896,GO:0051716,GO:0065003,GO:0065004,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090735,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 511.0
YYD2_k127_2098953_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000003259 237.0
YYD2_k127_2098953_2 Transcriptional regulator - - - 0.00000000000000000001342 93.0
YYD2_k127_2098953_4 ligase activity K00666,K03892 - - 0.00005272 48.0
YYD2_k127_2101901_0 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000005164 128.0
YYD2_k127_2102108_0 HELICc2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 584.0
YYD2_k127_2107406_0 Transcriptional regulator - - - 0.000001756 53.0
YYD2_k127_2115297_0 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000005964 190.0
YYD2_k127_2126343_0 cheY-homologous receiver domain - - - 0.000000000001289 73.0
YYD2_k127_2187515_0 PFAM 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 314.0
YYD2_k127_2194525_0 Belongs to the RtcB family K14415 - 6.5.1.3 7.222e-238 743.0
YYD2_k127_2194525_1 Located on the platform of the 30S subunit K02948 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000305 250.0
YYD2_k127_2194525_2 riboflavin synthase, alpha K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000254 203.0
YYD2_k127_2194525_3 - - - - 0.000000000000000000000000000001538 124.0
YYD2_k127_2194525_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K02858 - 4.1.99.12 0.0000000000000000002219 89.0
YYD2_k127_2197038_0 - - - - 0.0000000000005985 74.0
YYD2_k127_2199225_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008793 401.0
YYD2_k127_2199225_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000488 106.0
YYD2_k127_2199225_2 cheY-homologous receiver domain - - - 0.00001178 51.0
YYD2_k127_220140_0 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000003558 204.0
YYD2_k127_2206128_0 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000004565 168.0
YYD2_k127_2208057_0 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 2.499e-225 717.0
YYD2_k127_2208057_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000007143 62.0
YYD2_k127_2208057_2 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000006013 48.0
YYD2_k127_2229849_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 2.55e-226 712.0
YYD2_k127_2229849_1 Belongs to the enoyl-CoA hydratase isomerase family K01715,K15019 - 4.2.1.116,4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008734 271.0
YYD2_k127_2229849_2 RNA methylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002395 243.0
YYD2_k127_2229849_3 gamma-carboxymuconolactone decarboxylase subunit K01607 - 4.1.1.44 0.000000000000000000000000000000000001049 142.0
YYD2_k127_2235245_0 Psort location Cytoplasmic, score 9.97 - - - 0.00000000000000953 79.0
YYD2_k127_2235245_1 - - - - 0.0000000000114 70.0
YYD2_k127_2235245_2 Phosphoribosyl transferase domain - - - 0.00000000009285 64.0
YYD2_k127_2248950_0 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules K04763 - - 0.000005069 52.0
YYD2_k127_2249892_0 Belongs to the 5'-nucleotidase family K01119 - 3.1.3.6,3.1.4.16 0.0000000000005215 74.0
YYD2_k127_2262240_0 - - - - 0.00000000000001214 79.0
YYD2_k127_2266040_0 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000497 346.0
YYD2_k127_2266040_1 metal-binding integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002612 279.0
YYD2_k127_2266040_2 PUB domain - - - 0.00000000001036 70.0
YYD2_k127_2269407_0 Cysteine synthase K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008547 483.0
YYD2_k127_2269407_1 phosphoserine phosphatase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 307.0
YYD2_k127_2269407_2 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.000000000000000000000000000000000000000000000000000000000000000000000000004074 259.0
YYD2_k127_2269407_3 redox protein, regulator of disulfide bond formation - - - 0.000000000000000000000000000003235 121.0
YYD2_k127_2269512_0 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002901 241.0
YYD2_k127_2270600_1 methyltransferase - - - 0.000001165 58.0
YYD2_k127_2279228_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000005161 206.0
YYD2_k127_2279228_1 diguanylate cyclase - - - 0.00000000000003124 85.0
YYD2_k127_228461_0 PFAM tRNA synthetase, class II (D, K and N) K01893 - 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 394.0
YYD2_k127_2290024_0 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000005527 160.0
YYD2_k127_2301661_0 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000008519 252.0
YYD2_k127_2303190_0 DNA primase activity - - - 0.0000000000000000000000000000000006974 147.0
YYD2_k127_2315378_0 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000003038 241.0
YYD2_k127_2323732_0 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000001537 120.0
YYD2_k127_2323732_1 ASCH domain - - - 0.00000000000000000001124 94.0
YYD2_k127_2357330_0 Catalyzes two subsequent steps in gluconeogenesis the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P) K01622 - 3.1.3.11,4.1.2.13 9.058e-205 641.0
YYD2_k127_2357330_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009166 571.0
YYD2_k127_2357330_2 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 524.0
YYD2_k127_2357330_3 Carbon-nitrogen hydrolase K11206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 304.0
YYD2_k127_2357330_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000001259 239.0
YYD2_k127_2357330_5 High-affinity Fe2 Pb2 permease K07243 - - 0.000000000000000000000000000000000000000000000000000000000003731 227.0
YYD2_k127_2357330_7 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.00000000000000000000000001431 112.0
YYD2_k127_2357330_8 - - - - 0.0000000000000000000002405 99.0
YYD2_k127_2374105_0 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000006066 198.0
YYD2_k127_2374105_1 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily K08698 - - 0.00000000000000000000000000000000000000000000001696 172.0
YYD2_k127_2374105_2 response regulator, receiver - - - 0.00000000000000000000000005918 111.0
YYD2_k127_2374105_3 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily K08698 - - 0.00000000000000003944 81.0
YYD2_k127_2377174_0 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002184 233.0
YYD2_k127_2378884_0 Sel1 domain protein repeat-containing protein K07126 - - 0.000005157 58.0
YYD2_k127_2379568_0 transporter (mgtE) K06213 - - 0.00000000000000000000000000000000000000000000000000000000001509 216.0
YYD2_k127_2379568_1 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.0000000000000007169 78.0
YYD2_k127_2380100_1 - - - - 0.00000000000000000000000002343 113.0
YYD2_k127_2385142_0 Alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 424.0
YYD2_k127_2385142_1 COG1522 Transcriptional regulators - - - 0.000000000000000000000000000000000001648 141.0
YYD2_k127_2388057_0 - - - - 0.00000000001205 72.0
YYD2_k127_2388057_1 COG1525 Micrococcal nuclease (thermonuclease) homologs K01174 - 3.1.31.1 0.00001591 47.0
YYD2_k127_2388057_2 CHRD domain - - - 0.00003487 47.0
YYD2_k127_2388110_0 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000001752 59.0
YYD2_k127_2388110_1 PFAM Methyladenine glycosylase K01246 - 3.2.2.20 0.00000003625 54.0
YYD2_k127_2388110_2 COG1525 Micrococcal nuclease (thermonuclease) homologs K01174 - 3.1.31.1 0.00001591 47.0
YYD2_k127_2398456_0 RTX toxins and related Ca2 binding proteins - - - 0.0000000000000002251 88.0
YYD2_k127_2399374_0 Radical SAM - - - 0.0 1053.0
YYD2_k127_2399374_1 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 491.0
YYD2_k127_2399374_2 tRNA intron endonuclease, N-terminal domain K01170 - 4.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000001313 251.0
YYD2_k127_2399374_3 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000008451 203.0
YYD2_k127_2399374_4 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000824 158.0
YYD2_k127_2399374_5 Belongs to the eukaryotic ribosomal protein eL40 family K02927 - - 0.0000000000000000000002606 96.0
YYD2_k127_2399374_6 Cupin domain - - - 0.000000000000001445 81.0
YYD2_k127_2399607_0 Pfam:KaiC K08482 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001836 259.0
YYD2_k127_2401763_0 - - - - 0.000000000000000001925 88.0
YYD2_k127_2404007_0 GTPase of unknown function C-terminal K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 540.0
YYD2_k127_2404007_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37 K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 441.0
YYD2_k127_2404007_2 Mn2 -dependent serine threonine protein kinase K08851 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000001652 209.0
YYD2_k127_2404007_3 - - - - 0.0000000000000000000000000000007981 124.0
YYD2_k127_2404007_4 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000006167 70.0
YYD2_k127_2404007_5 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon - - - 0.00005907 49.0
YYD2_k127_2406021_0 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 322.0
YYD2_k127_2406147_0 CBS domain K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007054 321.0
YYD2_k127_2406520_0 Universal stress protein - - - 0.000000000000000000002325 100.0
YYD2_k127_2406520_1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K20989 - - 0.00000000000000000000772 98.0
YYD2_k127_2416277_0 - - - - 0.00000000000000000006341 98.0
YYD2_k127_2423690_0 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 327.0
YYD2_k127_2423690_1 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000004645 244.0
YYD2_k127_2435306_0 Belongs to the N(4) N(6)-methyltransferase family K00571,K07319 - 2.1.1.72 0.0000000000000006731 84.0
YYD2_k127_2456562_1 - - - - 0.00000000000000436 79.0
YYD2_k127_2456562_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.000127 51.0
YYD2_k127_2461027_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 372.0
YYD2_k127_2461027_1 PFAM PQQ enzyme repeat - - - 0.000000000000000000000000000000000000227 154.0
YYD2_k127_2461120_0 Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea K00096 - 1.1.1.261 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 430.0
YYD2_k127_2461120_1 Peptidyl-prolyl cis-trans K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000004122 216.0
YYD2_k127_2461120_2 RNA-binding protein contains TRAM domain - - - 0.000000000000000009071 86.0
YYD2_k127_2463264_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000005524 227.0
YYD2_k127_2463264_1 - - - - 0.0000000000000000000000000000007303 124.0
YYD2_k127_2463264_2 Lrp/AsnC ligand binding domain - - - 0.0001477 46.0
YYD2_k127_2463451_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000001385 173.0
YYD2_k127_2463451_1 WbqC-like protein family - - - 0.000000000000000000004939 96.0
YYD2_k127_2463708_0 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 4.4.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 389.0
YYD2_k127_2463708_1 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.00000000129 59.0
YYD2_k127_2464619_0 N-4 methylation of cytosine K00571 - 2.1.1.72 0.0000000000000000000000000000000004052 134.0
YYD2_k127_2470970_0 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 324.0
YYD2_k127_2470970_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000827 271.0
YYD2_k127_2470970_2 K homology RNA-binding domain K06961 - - 0.000000000000000000000000000000000000000000000000000000003594 205.0
YYD2_k127_2471402_0 Radical SAM K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 564.0
YYD2_k127_2471402_1 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000000000000000000000002833 188.0
YYD2_k127_2473998_0 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000003678 213.0
YYD2_k127_2473998_1 COG1522 Transcriptional regulators - - - 0.0000000000000000001947 88.0
YYD2_k127_2476360_0 PFAM GTP cyclohydrolase I K09457 - 1.7.1.13 0.000000000000000000000000000001627 124.0
YYD2_k127_2482574_0 Glycosyltransferase Family 4 - - - 0.0000000000000000000006675 110.0
YYD2_k127_2484784_0 synthetase (class II) K01880 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 442.0
YYD2_k127_2484784_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 300.0
YYD2_k127_2484784_2 Phage integrase family - - - 0.00000001864 59.0
YYD2_k127_2485885_0 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000169 230.0
YYD2_k127_2486899_0 Hydroxymethylglutaryl-coenzyme A synthase N terminal K01641 - 2.3.3.10 8.15e-241 751.0
YYD2_k127_2486899_1 Radical SAM K18285 - 2.5.1.120 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 554.0
YYD2_k127_2486899_10 Dioxygenase K03381 - 1.13.11.1 0.0001454 46.0
YYD2_k127_2486899_2 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 531.0
YYD2_k127_2486899_3 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 322.0
YYD2_k127_2486899_4 Copper resistance protein D - - - 0.0000000000000000000000000000000000000628 147.0
YYD2_k127_2486899_5 - - - - 0.00000000000000000000000007722 113.0
YYD2_k127_2486899_6 COG1522 Transcriptional regulators - - - 0.00000000000000000000002233 104.0
YYD2_k127_2486899_7 - - - - 0.0000000000000000000005424 98.0
YYD2_k127_2486899_9 Dioxygenase - - - 0.0000003161 54.0
YYD2_k127_248762_0 Glucose dehydrogenase C-terminus K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 299.0
YYD2_k127_248762_1 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000005203 174.0
YYD2_k127_2498352_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 295.0
YYD2_k127_2498352_1 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000005932 241.0
YYD2_k127_2499610_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009559 386.0
YYD2_k127_2499610_1 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 313.0
YYD2_k127_2499610_2 PFAM peptidase M4 thermolysin K08603 - 3.4.24.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008521 297.0
YYD2_k127_2499610_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000003219 222.0
YYD2_k127_2499610_4 PFAM Pentapeptide repeats (8 copies) - - - 0.0000000005895 73.0
YYD2_k127_2499610_5 - - - - 0.00005135 49.0
YYD2_k127_2506551_0 choline dehydrogenase activity K03333 - 1.1.3.6 0.000001052 57.0
YYD2_k127_2512365_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02256 GO:0003674,GO:0003824,GO:0004129,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005751,GO:0006091,GO:0006119,GO:0006123,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016675,GO:0016676,GO:0017144,GO:0019637,GO:0019646,GO:0019693,GO:0019866,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0034220,GO:0034641,GO:0042773,GO:0042775,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045277,GO:0045333,GO:0046034,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0070069,GO:0070469,GO:0071704,GO:0072521,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902600 1.9.3.1 0.000000000000001689 75.0
YYD2_k127_2512365_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02256 GO:0003674,GO:0003824,GO:0004129,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005751,GO:0006091,GO:0006119,GO:0006123,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016675,GO:0016676,GO:0017144,GO:0019637,GO:0019646,GO:0019693,GO:0019866,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0034220,GO:0034641,GO:0042773,GO:0042775,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045277,GO:0045333,GO:0046034,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0070069,GO:0070469,GO:0071704,GO:0072521,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902600 1.9.3.1 0.000000000003852 65.0
YYD2_k127_2512365_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02256 GO:0003674,GO:0003824,GO:0004129,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005751,GO:0006091,GO:0006119,GO:0006123,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016675,GO:0016676,GO:0017144,GO:0019637,GO:0019646,GO:0019693,GO:0019866,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0034220,GO:0034641,GO:0042773,GO:0042775,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045277,GO:0045333,GO:0046034,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0070069,GO:0070469,GO:0071704,GO:0072521,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902600 1.9.3.1 0.0000000001301 61.0
YYD2_k127_2515380_0 polysaccharide catabolic process K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000004571 227.0
YYD2_k127_2515380_1 NUDIX domain - - - 0.000000000000000003337 89.0
YYD2_k127_2515380_2 Predicted Peptidoglycan domain - - - 0.000000000000693 77.0
YYD2_k127_2515380_3 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000938 52.0
YYD2_k127_2522376_0 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 6.679e-243 766.0
YYD2_k127_2525634_1 Transcriptional regulator - - - 0.000000000000000115 82.0
YYD2_k127_2532740_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 376.0
YYD2_k127_2532740_1 response regulator, receiver - - - 0.000000000000000000000001375 106.0
YYD2_k127_253681_0 40-residue YVTN family beta-propeller - - - 0.00000007399 59.0
YYD2_k127_2542350_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000004085 68.0
YYD2_k127_2547618_0 PFAM CBS domain containing protein - - - 0.0000000000000000000001118 103.0
YYD2_k127_2547618_1 amino acid K16263 - - 0.00000000000002011 75.0
YYD2_k127_2557109_0 PFAM 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000001109 212.0
YYD2_k127_2559010_0 PFAM Glycosyl transferase family 2 K00752 - 2.4.1.212 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 305.0
YYD2_k127_2559010_1 PFAM ABC transporter K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005153 279.0
YYD2_k127_2559010_2 ABC 3 transport family K09816 - - 0.00000000000000000000000000000001368 129.0
YYD2_k127_2559010_3 ATP-grasp domain - - - 0.000000000000000000000004459 107.0
YYD2_k127_2567399_0 TPR Domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000003167 245.0
YYD2_k127_2567399_1 - - - - 0.000000000001682 68.0
YYD2_k127_2571729_0 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007582 300.0
YYD2_k127_2571729_1 Bacterial protein of unknown function (DUF899) - - - 0.00000000000000000000002393 100.0
YYD2_k127_2590878_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002187 278.0
YYD2_k127_2590878_1 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000002431 148.0
YYD2_k127_2590878_2 - - - - 0.000000000000001327 79.0
YYD2_k127_2592926_0 Transposase - - - 0.00000000000000000000000000005071 119.0
YYD2_k127_2592926_1 Transposase and inactivated derivatives - - - 0.00000001467 61.0
YYD2_k127_259921_0 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 535.0
YYD2_k127_259921_1 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000004205 185.0
YYD2_k127_2606963_0 phospholipase C K01114 - 3.1.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 577.0
YYD2_k127_2606963_1 Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits K03236 - - 0.0000000000000000000000000000000000000000003263 162.0
YYD2_k127_2612685_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 2.395e-209 681.0
YYD2_k127_2613672_0 F5/8 type C domain - - - 0.000000000000000003598 89.0
YYD2_k127_2617182_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 - 2.7.7.7 0.0 1467.0
YYD2_k127_2617182_1 Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 5.513e-228 712.0
YYD2_k127_2617182_2 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17104 - 2.5.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000773 360.0
YYD2_k127_2617409_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 421.0
YYD2_k127_2617409_1 Mg2 transporter protein K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 370.0
YYD2_k127_2617409_2 Protein of unknown function (DUF790) K09744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 355.0
YYD2_k127_2617409_4 - - - - 0.0000000003193 64.0
YYD2_k127_2635646_0 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 295.0
YYD2_k127_2635646_1 Biotin lipoyl attachment domain-containing protein K01960 - 6.4.1.1 0.00002207 51.0
YYD2_k127_2651138_0 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 385.0
YYD2_k127_2651138_1 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 357.0
YYD2_k127_2651138_2 UreF K03188 - - 0.0000000000000000000000000000000000000000000000000000000001203 208.0
YYD2_k127_265843_0 PFAM tRNA synthetases class I (C) catalytic domain K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 531.0
YYD2_k127_265843_1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K00363,K15762 - 1.7.1.15 0.000000000000000000000000000000000001422 140.0
YYD2_k127_265843_2 Belongs to the eukaryotic ribosomal protein eS1 family K02984 - - 0.0000000000000000000000000000001141 126.0
YYD2_k127_265843_3 Fibronectin type III domain K03933 - - 0.00000000000002673 83.0
YYD2_k127_2663603_0 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into K04799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 390.0
YYD2_k127_2663603_1 PFAM transposase, IS4 family protein - - - 0.000002056 53.0
YYD2_k127_2667237_0 NAD(P)H-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006367 253.0
YYD2_k127_2669954_0 helicase activity K06915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000055 593.0
YYD2_k127_2670836_0 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001558 238.0
YYD2_k127_2670836_1 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000001594 217.0
YYD2_k127_2671323_0 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000074 358.0
YYD2_k127_2671323_1 N-methylhydantoinase A acetone carboxylase, beta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 291.0
YYD2_k127_2671323_2 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007068 278.0
YYD2_k127_2673115_0 PspA/IM30 family K03969 - - 0.00000000000000000000000000000000000000000000000000000000000003975 221.0
YYD2_k127_2673115_1 - - - - 0.00000000000000000000006494 106.0
YYD2_k127_2673115_2 - - - - 0.00000000000004579 76.0
YYD2_k127_2673115_3 Dodecin K09165 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000001164 64.0
YYD2_k127_2673115_4 Belongs to the Dps family K04047 - - 0.0006191 46.0
YYD2_k127_2689102_0 CBS domain K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 338.0
YYD2_k127_2695101_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07713 - - 0.00001529 52.0
YYD2_k127_2696564_0 NAD(P)H-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000001028 169.0
YYD2_k127_2696564_1 COG3316 Transposase and inactivated derivatives K07498 - - 0.0000000000000002735 87.0
YYD2_k127_2708878_0 Heavy metal transport detoxification protein K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 607.0
YYD2_k127_2708878_1 Archaeal TRASH domain - - - 0.0000000000000000000000000000000000000007471 153.0
YYD2_k127_2708878_4 - - - - 0.0000009266 59.0
YYD2_k127_2711146_0 synthetase (class II) K01880 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 310.0
YYD2_k127_2711146_1 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 307.0
YYD2_k127_2714076_0 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 - - 0.00000000000000000000000000000000000006661 145.0
YYD2_k127_2714701_0 sequence-specific DNA binding - - - 0.000000000000002866 89.0
YYD2_k127_2715151_0 Histidine kinase - - - 0.0002934 48.0
YYD2_k127_2717667_0 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006897 271.0
YYD2_k127_2717667_1 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.000000000000000000000000000000000001506 141.0
YYD2_k127_271949_0 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000003679 144.0
YYD2_k127_271949_1 - - - - 0.0000000000000000000003655 104.0
YYD2_k127_2723498_0 PAC2 family K06869 - - 0.00000000000000000000000000000000000000000000000000009962 196.0
YYD2_k127_2723498_1 Belongs to the Dps family K04047 - - 0.0000000000003417 69.0
YYD2_k127_2728350_0 Isocitrate isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005924 380.0
YYD2_k127_2728350_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 378.0
YYD2_k127_2728350_2 small GTP-binding protein K06944 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004359 245.0
YYD2_k127_2728350_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000001102 218.0
YYD2_k127_2728350_4 Signal peptidase K13280 - 3.4.21.89 0.00000000000000000000000000000000000000000000000001198 185.0
YYD2_k127_2728350_5 Reverse transcriptase-like - - - 0.000000000000002581 81.0
YYD2_k127_2730173_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 8.847e-237 741.0
YYD2_k127_2730173_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 474.0
YYD2_k127_2730173_2 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000000000000000000000000000000000000000000000000000000002021 214.0
YYD2_k127_2730173_3 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000001679 198.0
YYD2_k127_2730173_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17884 - 2.7.8.39 0.00000000000000000000000000000000000000000000000003815 184.0
YYD2_k127_2730173_5 ribosomal protein K02976 - - 0.0000000000000000000000000000000000000000000001185 169.0
YYD2_k127_2730173_6 BNR Asp-box repeat K01186 - 3.2.1.18 0.000000001216 68.0
YYD2_k127_274194_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 543.0
YYD2_k127_274194_1 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002192 273.0
YYD2_k127_274194_2 Nudix hydrolase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000003192 182.0
YYD2_k127_274194_3 Transcription elongation factor - - - 0.000000000000000000000000000000001709 133.0
YYD2_k127_2746106_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.000000000000000000000000000000000000000000000000000000000000000000007131 243.0
YYD2_k127_2746106_1 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000002311 184.0
YYD2_k127_2747970_0 Type III restriction enzyme, res subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 512.0
YYD2_k127_2747970_1 PFAM Ammonia monooxygenase methane monooxygenase, subunit C K10946 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 373.0
YYD2_k127_2747970_2 restriction endonuclease K07448 - - 0.0000001675 57.0
YYD2_k127_2759215_1 response regulator, receiver - - - 0.000000000000000000003039 98.0
YYD2_k127_2759215_2 Sigma-54 interaction domain - - - 0.0005763 44.0
YYD2_k127_2764453_0 Ferritin-like domain K03594 - 1.16.3.1 0.000000000000000000000000000000000003695 142.0
YYD2_k127_2766354_0 RecA RadA K04482,K04483 - - 0.0000000000000000000000444 108.0
YYD2_k127_2766354_1 snRNP Sm proteins K04796 - - 0.000000000000000000005923 93.0
YYD2_k127_2771432_0 Zinc finger domain - - - 0.0000000000000000000000000000000007939 132.0
YYD2_k127_2771432_1 O-methyltransferase activity K00545 - 2.1.1.6 0.0000000000000000000001156 106.0
YYD2_k127_2771432_2 DoxX-like family - - - 0.000000000000000000006397 98.0
YYD2_k127_2771996_0 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000003299 219.0
YYD2_k127_2771996_1 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000006427 210.0
YYD2_k127_2777923_0 Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000000000000168 71.0
YYD2_k127_278320_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 556.0
YYD2_k127_278320_1 - - - - 0.00000000000000000000000004276 110.0
YYD2_k127_2789520_0 GYD domain - - - 0.00000000000000000001275 94.0
YYD2_k127_2789520_1 - - - - 0.000000000000001015 81.0
YYD2_k127_2789520_3 Patatin phospholipase - - - 0.0007961 44.0
YYD2_k127_2794305_0 - - - - 0.00000000002303 76.0
YYD2_k127_2796555_0 PFAM TatD-related deoxyribonuclease K07051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005868 271.0
YYD2_k127_2800764_0 - - - - 0.000000000000000000000000000000000000000000000005759 179.0
YYD2_k127_2800764_1 - - - - 0.00002798 48.0
YYD2_k127_2803844_0 COG1653 ABC-type sugar transport system, periplasmic component K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 468.0
YYD2_k127_2805692_0 Patatin phospholipase - - - 0.000000001056 71.0
YYD2_k127_2809405_0 - - - - 0.000000000000000000000000000000000000000000000000000008338 193.0
YYD2_k127_2809405_1 - - - - 0.00000000000000000000000000000000000000000000227 170.0
YYD2_k127_2811356_0 Ribbon-helix-helix protein, copG family K07722 - - 0.00000000000000000000000000000000000000000000845 166.0
YYD2_k127_2811356_1 ATP-grasp domain - - - 0.0000000000000000000000000000009971 130.0
YYD2_k127_2811356_2 DNA polymerase K02347 - - 0.00000000000000406 83.0
YYD2_k127_2815227_0 Protein of unknown function (DUF655) K07572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001932 267.0
YYD2_k127_2815227_1 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 0.00000000000000000000000000000000000000000000000000000000000273 211.0
YYD2_k127_2815227_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000004492 197.0
YYD2_k127_2815227_3 RNA polymerase Rpb4 K03051 - 2.7.7.6 0.00000000000000000000000000000000002565 137.0
YYD2_k127_2815227_4 Belongs to the eukaryotic ribosomal protein eL21 family K02889 - - 0.00000000000000000000000000000000005762 136.0
YYD2_k127_2818090_0 Belongs to the MCM family K10726 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008625 308.0
YYD2_k127_2818090_1 - - - - 0.0000000000000000000000000000000001093 135.0
YYD2_k127_2818090_2 transcription factor (CBF NF-Y) - - - 0.000000000000000001164 87.0
YYD2_k127_2818090_3 - - - - 0.00000000000000005448 80.0
YYD2_k127_2818090_5 - - - - 0.00000000000009333 74.0
YYD2_k127_2818368_0 zinc finger - - - 0.000000000000000000000000000000000000000000008324 169.0
YYD2_k127_2818368_1 CBS domain - - - 0.00000000000000000000000000000000009187 138.0
YYD2_k127_2818368_2 Antibiotic biosynthesis monooxygenase - - - 0.00000000001525 69.0
YYD2_k127_2834123_0 Arsenical pump membrane protein - - - 0.000000000000000000000000000000000000000000000000000003701 194.0
YYD2_k127_2834123_1 CBS domain K03498 - - 0.00000000000000000000000000000832 122.0
YYD2_k127_2834555_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0005488,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0016787,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0046914,GO:0050897,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.17.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 331.0
YYD2_k127_2834555_2 Pfam:DUF385 - - - 0.000000000000000000000009605 105.0
YYD2_k127_2836986_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 2.504e-206 647.0
YYD2_k127_2836986_1 ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA K06932 - 6.3.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 501.0
YYD2_k127_2836986_2 ThiF family K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 495.0
YYD2_k127_2836986_3 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 368.0
YYD2_k127_2836986_4 Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex K03264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001673 267.0
YYD2_k127_2836986_5 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.00000000000000000000000000000000000000000000000002561 180.0
YYD2_k127_2842410_0 cation diffusion facilitator family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 329.0
YYD2_k127_2845688_0 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000001318 198.0
YYD2_k127_2849576_0 Galactose oxidase, central domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 308.0
YYD2_k127_2849576_1 Chromate resistance - - - 0.00000000000000000000000000001951 117.0
YYD2_k127_2856272_0 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03635,K03637 - 2.8.1.12,4.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 324.0
YYD2_k127_2856272_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000001466 141.0
YYD2_k127_2856272_2 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.000000000000000000000000001088 117.0
YYD2_k127_2856272_3 response to heat K07090 - - 0.0000000000000002363 83.0
YYD2_k127_2856272_4 ThiS family K03636 - - 0.000000578 54.0
YYD2_k127_2859420_0 Universal stress protein - - - 0.00000000000000000000000000006824 121.0
YYD2_k127_2859420_1 Universal stress protein - - - 0.00000000000000000000000008409 112.0
YYD2_k127_2859420_2 Universal stress protein - - - 0.000000000000000000009001 100.0
YYD2_k127_2861159_0 - - - - 0.00000001333 61.0
YYD2_k127_2870552_0 DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks K03726 - - 3.242e-247 784.0
YYD2_k127_2870552_1 glycosyl transferase family K01001 - 2.7.8.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007954 432.0
YYD2_k127_2870552_3 - - - - 0.00002358 49.0
YYD2_k127_2876522_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001514 259.0
YYD2_k127_2876522_1 Phosphoglycerate mutase family K08296 - - 0.0003521 45.0
YYD2_k127_2889221_0 proteolysis - - - 0.000812 51.0
YYD2_k127_2924233_0 Succinyl-CoA ligase like flavodoxin domain K18594 - - 0.0 1102.0
YYD2_k127_2924233_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 1.674e-216 677.0
YYD2_k127_2924233_10 - - - - 0.0000000000000000000000009992 105.0
YYD2_k127_2924233_11 regulatory protein AsnC K03718 - - 0.000000000000000002903 91.0
YYD2_k127_2924233_12 mttA/Hcf106 family K03116 - - 0.0000000000000000357 86.0
YYD2_k127_2924233_13 Belongs to the UPF0284 family - - - 0.00007865 48.0
YYD2_k127_2924233_2 DNA primase K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006474 548.0
YYD2_k127_2924233_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000935 285.0
YYD2_k127_2924233_4 Domain of unknown function DUF120 K07732 - 2.7.1.161 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001527 277.0
YYD2_k127_2924233_5 Cytidylyltransferase-like K00980,K14656 - 2.7.7.2,2.7.7.39 0.00000000000000000000000000000000000000000000000000000000000000000000000008783 254.0
YYD2_k127_2924233_6 Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX K17759 - 5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000003505 242.0
YYD2_k127_2924233_7 Iron-sulfur cluster assembly accessory protein K13628 - - 0.000000000000000000000000000000000000000000000000000000002688 200.0
YYD2_k127_2924233_8 Translin family K07477 - - 0.00000000000000000000000000000000000000000000000000003996 194.0
YYD2_k127_2924233_9 A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5'-terminal phosphate and a 3'-terminal hydroxyl group that are ligated to produce recombinant products - - - 0.00000000000000000000000000000000000000000000001192 176.0
YYD2_k127_2926250_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.989e-201 631.0
YYD2_k127_2926250_1 F420-0:Gamma-glutamyl ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 292.0
YYD2_k127_2926250_2 small GTP-binding protein K06944 - - 0.000000000000000000000000000000000000000000000000000000000000002852 219.0
YYD2_k127_2926250_3 - - - - 0.0000000000000000000000000000000000000000000002987 169.0
YYD2_k127_2926250_4 small GTP-binding protein K06944 - - 0.0000000000000000000000000000000000000001005 154.0
YYD2_k127_2926250_5 - - - - 0.00000000003825 64.0
YYD2_k127_2935912_1 - - - - 0.000000000000000000000000006683 117.0
YYD2_k127_2954835_0 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000000000004146 106.0
YYD2_k127_2954835_1 pfkB family carbohydrate kinase - - - 0.0000001012 56.0
YYD2_k127_2954835_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00008068 48.0
YYD2_k127_2988032_0 - - - - 0.00000000000000000000000000000034 128.0
YYD2_k127_3006493_0 SMC proteins Flexible Hinge Domain K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003199 261.0
YYD2_k127_3007401_0 - - - - 0.0000000000000000000000000000000000000001977 162.0
YYD2_k127_3007401_2 - - - - 0.0005679 45.0
YYD2_k127_3010069_0 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007368 345.0
YYD2_k127_3010069_1 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 334.0
YYD2_k127_3010069_2 ABC 3 transport family K02075,K09816,K09819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001059 255.0
YYD2_k127_3010069_3 AAA domain, putative AbiEii toxin, Type IV TA system K02074,K09817,K11607,K11710 - - 0.00000000000000000000000000000000000000000000000000000000000008087 220.0
YYD2_k127_3013743_0 Alpha beta - - - 0.000000000000000000000000000000000000000000000000000000000000004335 224.0
YYD2_k127_3026804_0 Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'- 5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails K11600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 409.0
YYD2_k127_3026804_1 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site K12589 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006794 381.0
YYD2_k127_3026804_2 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome K03679 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 354.0
YYD2_k127_3026804_3 Shwachman-Bodian-Diamond syndrome (SBDS) protein K14574 - - 0.000000000000000000000000000000000000000000000007748 174.0
YYD2_k127_3026804_4 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04798 - - 0.000000000000000000000000000000000000004668 149.0
YYD2_k127_3026804_5 Ribosomal L37ae protein family K02921 - - 0.0000000000000000000000000000001264 124.0
YYD2_k127_3030305_0 SMART Tetratricopeptide repeat - - - 0.000000001255 63.0
YYD2_k127_3032708_0 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091,K01838,K07025 - 3.1.3.18,5.4.2.6 0.000000000000000000000000000000000000000000000000001254 190.0
YYD2_k127_3082926_0 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 336.0
YYD2_k127_3082926_1 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000000004887 203.0
YYD2_k127_3082926_2 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000003084 173.0
YYD2_k127_3087819_0 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000001622 190.0
YYD2_k127_3091999_0 Radical SAM - - - 1.314e-321 987.0
YYD2_k127_3091999_1 Glycosyl transferase family 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 456.0
YYD2_k127_3091999_2 archaeal coiled-coil protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 290.0
YYD2_k127_3091999_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000005721 217.0
YYD2_k127_3091999_4 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function - - - 0.0000000000000000000000000000000000000000000000000000004365 201.0
YYD2_k127_3091999_5 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000001405 174.0
YYD2_k127_3091999_6 - - - - 0.00000000000000000000000000000000005296 136.0
YYD2_k127_3097689_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003917 271.0
YYD2_k127_3097689_1 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000001316 118.0
YYD2_k127_3100357_0 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000002756 68.0
YYD2_k127_3122840_0 UbiA prenyltransferase K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 294.0
YYD2_k127_3122840_1 - - - - 0.000000001218 61.0
YYD2_k127_312355_0 Large-conductance mechanosensitive channel, MscL K03282 - - 0.00000000000000000000000000000000007597 137.0
YYD2_k127_3124936_0 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000002237 243.0
YYD2_k127_3124936_1 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.000000000000000000000000000000000000000000000000000000001433 205.0
YYD2_k127_3129789_0 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 398.0
YYD2_k127_3130713_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 406.0
YYD2_k127_3130713_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000007411 265.0
YYD2_k127_3130713_2 PIN domain of ribonuclease K07060 - - 0.0000000000000000000000009873 109.0
YYD2_k127_3132274_0 Luciferase-like monooxygenase K14728 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 518.0
YYD2_k127_3132274_1 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 349.0
YYD2_k127_3133238_0 ThiJ PfpI - - - 0.0000000000000000000000000000000000000000000000000000000000009509 216.0
YYD2_k127_3139297_0 Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K02683 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 334.0
YYD2_k127_3148834_0 - - - - 0.000000000000000000000001071 117.0
YYD2_k127_314952_0 cation diffusion facilitator family transporter K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 327.0
YYD2_k127_3150289_0 Radical SAM K11781 - 2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 561.0
YYD2_k127_3158640_0 flavodoxin nitric oxide synthase - - - 0.000000000000000000000000000000000000000001395 157.0
YYD2_k127_3158959_0 - - - - 0.0000000000000000000000001447 116.0
YYD2_k127_315901_0 RNA-metabolising metallo-beta-lactamase K07041 - - 0.0 1017.0
YYD2_k127_315901_1 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000001965 217.0
YYD2_k127_315901_3 Belongs to the UPF0147 family K09721 - - 0.0000000000002729 74.0
YYD2_k127_3159525_0 PFAM zinc iron permease K07238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 338.0
YYD2_k127_3159525_1 glutaconyl-CoA decarboxylase subunit gamma - - - 0.000000000000006313 78.0
YYD2_k127_3162216_0 PFAM Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000001955 188.0
YYD2_k127_3170338_0 Purple acid Phosphatase, N-terminal domain - - - 0.0000000000000000000000001736 114.0
YYD2_k127_3177352_0 - - - - 0.00000000009358 66.0
YYD2_k127_3189632_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 595.0
YYD2_k127_3189632_1 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 390.0
YYD2_k127_3202164_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 2.904e-207 654.0
YYD2_k127_3202164_1 Radical SAM K11780 - 2.5.1.77 0.00000000000000000000000000000000000001158 151.0
YYD2_k127_3202164_2 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000001651 147.0
YYD2_k127_3202164_3 - - - - 0.00000000000000000000000000000000323 131.0
YYD2_k127_3208194_0 Circadian clock protein KaiC K06945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002097 287.0
YYD2_k127_3208194_1 response regulator, receiver - - - 0.00000000000000005334 88.0
YYD2_k127_3208194_2 COG0455 ATPases involved in chromosome partitioning K03496,K03609 - - 0.00000003669 55.0
YYD2_k127_3208194_3 OsmC-like protein - - - 0.0000001152 61.0
YYD2_k127_3208830_0 UPF0056 membrane protein K05595 - - 0.000000000000000000000000000000000000000000000000001749 188.0
YYD2_k127_3208830_1 - - - - 0.00000000000000000000000000005537 119.0
YYD2_k127_3208830_2 ASCH domain - - - 0.000215 44.0
YYD2_k127_3212498_0 response regulator, receiver K02490 - - 0.00000006025 58.0
YYD2_k127_3216410_0 Metallo-beta-lactamase superfamily K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000001824 229.0
YYD2_k127_3229007_0 TIGRFAM glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 - 2.6.1.16 8.109e-226 713.0
YYD2_k127_3229007_1 PFAM S-layer - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 371.0
YYD2_k127_3229007_2 Belongs to the UPF0284 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 365.0
YYD2_k127_3229007_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000006854 214.0
YYD2_k127_3229007_4 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000002795 94.0
YYD2_k127_3265867_0 alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 329.0
YYD2_k127_3265867_1 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000004875 91.0
YYD2_k127_329578_0 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000008128 96.0
YYD2_k127_329578_1 MerR family transcriptional regulator K22491 - - 0.0000000000007074 76.0
YYD2_k127_3306946_0 geranylgeranyl reductase K17830 - 1.3.1.101,1.3.7.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888 526.0
YYD2_k127_3306946_1 Belongs to the complex I 20 kDa subunit family K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 323.0
YYD2_k127_3306946_2 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 3 K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000002312 212.0
YYD2_k127_3306946_3 AhpC/TSA antioxidant enzyme K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000007372 182.0
YYD2_k127_330887_0 MGS-like domain K01955 - 6.3.5.5 0.0 1457.0
YYD2_k127_330887_1 carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004163 524.0
YYD2_k127_330887_2 Calcineurin-like phosphoesterase K06953 - - 0.00000000000000000000000000000000000000000000000000000000001703 215.0
YYD2_k127_330887_3 Functions by promoting the formation of the first peptide bond K03263 - - 0.00000000000000000000000000000000000000000000000000000000228 203.0
YYD2_k127_330887_4 PFAM Glycosyl transferase family 2 K07011,K11936 - - 0.00000000000000003441 93.0
YYD2_k127_330887_6 COG3325 Chitinase K01183 - 3.2.1.14 0.0000011 61.0
YYD2_k127_330887_7 MGS-like domain K01955 - 6.3.5.5 0.0008989 42.0
YYD2_k127_3310108_0 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000007262 225.0
YYD2_k127_3310108_1 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000001619 218.0
YYD2_k127_3340886_0 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000001641 181.0
YYD2_k127_3340886_1 - - - - 0.00000000002317 67.0
YYD2_k127_3340886_2 PFAM Integrase core domain K07497 - - 0.000000001611 61.0
YYD2_k127_3342880_0 helix_turn_helix ASNC type - - - 0.00000000000000000000000000000000000000000000000000000000000000004184 225.0
YYD2_k127_3342880_1 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000001667 208.0
YYD2_k127_3342880_2 response regulator, receiver - - - 0.00000000000005432 78.0
YYD2_k127_334445_0 Transcription factor zinc-finger K09981 - - 0.000000000002197 68.0
YYD2_k127_33473_1 D-glucuronyl C5-epimerase C-terminus - - - 0.0000000004018 67.0
YYD2_k127_3378744_0 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000008132 120.0
YYD2_k127_3398807_0 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000001393 164.0
YYD2_k127_3398807_1 - - - - 0.000000002424 66.0
YYD2_k127_34064_0 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 304.0
YYD2_k127_34064_1 Acetyltransferase (GNAT) domain K00621 - 2.3.1.4 0.0000000000000000000000000001977 120.0
YYD2_k127_34064_2 Asp/Glu/Hydantoin racemase K01776 - 5.1.1.3 0.0000000000000001272 81.0
YYD2_k127_341163_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000001818 241.0
YYD2_k127_341163_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.000000000000000000000000000000000000000000000001347 188.0
YYD2_k127_341768_0 Cobalamin B12-binding domain protein K16955,K22491 - - 0.00000000000000000000000000000000000000000000000001538 190.0
YYD2_k127_341768_1 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000003529 109.0
YYD2_k127_3420821_0 PFAM Ion transport K08714 - - 0.0000000000000000000000000000000000000000000000000005122 194.0
YYD2_k127_342566_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 324.0
YYD2_k127_3427724_0 Proteasome endopeptidase complex K03432 - 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 379.0
YYD2_k127_3427724_1 SAICAR synthetase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006673 312.0
YYD2_k127_3427724_2 - - - - 0.000000000000000000000000000000000000000000000000000006874 192.0
YYD2_k127_3427724_3 Domain of unknown function (DUF371) K09738 - - 0.000000000000000000000000000000000000000002177 159.0
YYD2_k127_342931_0 amino acid K16263 - - 0.000000000000000000000000000000000000000000000000000000000000007781 230.0
YYD2_k127_3444302_1 - - - - 0.000000000000000006624 85.0
YYD2_k127_345915_0 Cobalamin B12-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000001677 228.0
YYD2_k127_345915_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000001687 157.0
YYD2_k127_345915_2 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000004506 121.0
YYD2_k127_351477_0 Conserved repeat domain - - - 0.000000000000307 80.0
YYD2_k127_3515076_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004412 409.0
YYD2_k127_3515076_1 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.00000000000000000000000000000000000000002732 153.0
YYD2_k127_3515076_2 aspartate ornithine carbamoyltransferase carbamoyl-P binding domain K00611 - 2.1.3.3 0.0000000000000000002872 87.0
YYD2_k127_352781_0 - - - - 0.000000000000000000000000004941 116.0
YYD2_k127_353176_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 338.0
YYD2_k127_353176_1 ABC-type transport system, periplasmic component surface lipoprotein K02058,K07335 - - 0.000000000000359 71.0
YYD2_k127_3536010_0 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 335.0
YYD2_k127_3538441_0 Iron-binding zinc finger CDGSH type - - - 0.000000000000000000000000000000000000000000000000002644 190.0
YYD2_k127_3538441_1 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000001754 116.0
YYD2_k127_3538441_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000005773 100.0
YYD2_k127_3538441_3 RNA-metabolising metallo-beta-lactamase K07576 - - 0.0001133 44.0
YYD2_k127_3542298_0 aconitate hydratase K01681 - 4.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000002554 244.0
YYD2_k127_356744_0 Belongs to the TPP enzyme family K04103 - 4.1.1.74 0.0000000000000000000000000000000000000000000000000000000000002647 214.0
YYD2_k127_3607133_0 - - - - 0.00000001238 63.0
YYD2_k127_3625758_0 component I K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000001418 226.0
YYD2_k127_3625758_1 RNA-binding protein contains TRAM domain - - - 0.0000000001998 61.0
YYD2_k127_3635174_0 With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003768 265.0
YYD2_k127_3635174_1 Participates in transcription termination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000003917 234.0
YYD2_k127_3635174_2 PFAM ribosomal protein L7Ae L30e S12e Gadd45 K02908 - - 0.00000000000000003095 84.0
YYD2_k127_3635174_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center K02992 - - 0.00000000002068 67.0
YYD2_k127_368754_0 - - - - 0.00000000000000000000000002955 112.0
YYD2_k127_368754_1 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000001981 60.0
YYD2_k127_3698121_0 COG0346 Lactoylglutathione lyase and related lyases K15975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 441.0
YYD2_k127_3698121_1 phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000001409 229.0
YYD2_k127_373365_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000744 344.0
YYD2_k127_373365_1 response regulator, receiver - - - 0.0000000008955 64.0
YYD2_k127_374239_0 TPR Domain containing protein K12600 - - 0.000408 43.0
YYD2_k127_376564_0 Methionine synthase K00548 - 2.1.1.13 1.413e-245 768.0
YYD2_k127_376564_1 homocysteine S-methyltransferase K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005735 517.0
YYD2_k127_3766040_0 acid phosphatase activity K22390 - - 0.000000000000000432 89.0
YYD2_k127_3766040_1 protein conserved in archaea - - - 0.00000002369 57.0
YYD2_k127_3767561_0 ABC-type transport system, periplasmic component surface lipoprotein K02058,K07335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 403.0
YYD2_k127_3775767_0 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 310.0
YYD2_k127_3775767_1 - - - - 0.000000000000000000000000000000000000000006964 167.0
YYD2_k127_3775767_2 DnaJ-class molecular chaperone with C-terminal Zn finger domain - - - 0.00000000000000000000000000000000000000007931 158.0
YYD2_k127_3775767_3 Hydrolyzes mannosyl-3-phosphoglycerate (MPG) to form the osmolyte mannosylglycerate (MG) K07026 - 3.1.3.70 0.000000000000000000000000000000000005729 146.0
YYD2_k127_3775767_4 ParB-like nuclease domain K03497 - - 0.00000000000007886 72.0
YYD2_k127_3781859_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00150 - 1.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 493.0
YYD2_k127_3781859_1 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 456.0
YYD2_k127_3781859_2 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001109 281.0
YYD2_k127_3781859_3 - - - - 0.0000000000000000000000000000000001032 134.0
YYD2_k127_3781859_4 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.0000000000000000000000000000002129 125.0
YYD2_k127_3781859_5 - - - - 0.0000000000000000000000000689 112.0
YYD2_k127_3781859_6 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.0000000000000004526 81.0
YYD2_k127_3811440_0 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000019 285.0
YYD2_k127_3811440_1 COG2406 Protein distantly related to bacterial ferritins K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001003 252.0
YYD2_k127_3811440_2 Belongs to the MenA family. Type 1 subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000002909 242.0
YYD2_k127_3811440_3 Methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000005995 188.0
YYD2_k127_3811440_5 4-hydroxybenzoate synthetase (chorismate lyase) K03181,K06984 - 2.4.2.54,4.1.3.40 0.000000000000004661 81.0
YYD2_k127_3811440_6 Peptidase family M23 - - - 0.000000000000007306 78.0
YYD2_k127_3816151_0 D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000003337 262.0
YYD2_k127_3821426_0 DsrE/DsrF-like family - - - 0.0000000002743 66.0
YYD2_k127_382974_0 Purple acid Phosphatase, N-terminal domain - - - 0.00000000000000005215 94.0
YYD2_k127_3837021_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02323 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004406 552.0
YYD2_k127_3837021_1 - - - - 0.000000000000000000000000000000000000000000004172 168.0
YYD2_k127_3837021_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000003669 55.0
YYD2_k127_3837620_0 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.000000000000000000000000000000000000000000000000000000000000004528 226.0
YYD2_k127_3852586_0 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 560.0
YYD2_k127_3852586_1 Cyclophilin-like K09143 - - 0.0000000000000000002128 93.0
YYD2_k127_3852586_2 S25 ribosomal protein K02975 - - 0.0000000000000005346 81.0
YYD2_k127_3856675_0 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002771 233.0
YYD2_k127_3856675_2 DUF167 K09131 - - 0.00000000003117 66.0
YYD2_k127_3864080_0 PFAM Iron-containing alcohol dehydrogenase K18602 - - 0.0000000000000000000000000000000000000000000003749 168.0
YYD2_k127_3864080_1 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000008808 142.0
YYD2_k127_3864080_2 Transcriptional regulatory protein, C terminal K18344 - - 0.000000000000002829 80.0
YYD2_k127_387833_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases K15510,K21835 - 1.1.98.2,1.1.98.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 308.0
YYD2_k127_3887723_0 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006093 326.0
YYD2_k127_3887723_1 Alpha beta hydrolase - - - 0.0000000000000000000000006967 117.0
YYD2_k127_3910190_1 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.000000000000000000000000000000000000001213 149.0
YYD2_k127_3912223_0 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000005826 227.0
YYD2_k127_3912223_1 Transcriptional regulator - - - 0.00000000000000001196 85.0
YYD2_k127_3920078_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665,K06883 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043021,GO:0043022,GO:0044424,GO:0044464,GO:0044877 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 419.0
YYD2_k127_392792_0 response regulator, receiver - - - 0.000005136 53.0
YYD2_k127_39358_0 PFAM hydrogenase formation HypD protein K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 454.0
YYD2_k127_39358_1 TIGRFAM NiFe hydrogenase maturation protein HypF K04656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002523 252.0
YYD2_k127_39358_2 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.0000000000000000007453 89.0
YYD2_k127_39358_3 Belongs to the carbamoyltransferase HypF family K04656 - - 0.00000005735 55.0
YYD2_k127_3938490_0 - - - - 0.00000000000000304 80.0
YYD2_k127_3938490_1 DNA primase, small subunit K01971 - 6.5.1.1 0.000000000001785 70.0
YYD2_k127_39911_0 - - - - 0.000000006647 68.0
YYD2_k127_3996067_0 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 545.0
YYD2_k127_3996067_1 - - - - 0.00001003 51.0
YYD2_k127_3999367_0 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000000000002069 66.0
YYD2_k127_4006706_0 MoeA C-terminal region (domain IV) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000005645 188.0
YYD2_k127_4006706_1 membrane transporter protein K07090 - - 0.000000000000000005976 90.0
YYD2_k127_4026284_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 317.0
YYD2_k127_4026284_1 Hemerythrin HHE cation binding domain - - - 0.0000000000000000002154 88.0
YYD2_k127_4034504_0 biosynthesis protein K03328 - - 0.00000004249 64.0
YYD2_k127_4034504_1 Glycosyltransferase like family 2 - - - 0.0001126 49.0
YYD2_k127_4042825_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 589.0
YYD2_k127_4042825_1 Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication K04802 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 300.0
YYD2_k127_4042825_2 Tetrapyrrole (Corrin/Porphyrin) Methylases K05934 - 2.1.1.131 0.000000000000000000000000000286 114.0
YYD2_k127_4064688_0 Alpha beta hydrolase K01066,K14731 - 3.1.1.83 0.0000000000000000001971 88.0
YYD2_k127_4064688_1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K05710 - - 0.00000000000000001193 85.0
YYD2_k127_40652_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007921 274.0
YYD2_k127_40652_1 Sulfatase K01130 - 3.1.6.1 0.0000000000000000000000000000000000000001167 160.0
YYD2_k127_4081482_0 Anticodon-binding domain of tRNA K01873 - 6.1.1.9 0.0 1130.0
YYD2_k127_4081482_1 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 427.0
YYD2_k127_4081482_10 - - - - 0.000000000000000000000000000000000000000000000001401 176.0
YYD2_k127_4081482_11 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000000000000000000000005175 169.0
YYD2_k127_4081482_12 Binds to the 23S rRNA K02929 - - 0.0000000000000000000000000000000000000000002433 159.0
YYD2_k127_4081482_13 - - - - 0.000000000000000000000000000000000002528 145.0
YYD2_k127_4081482_14 Belongs to the PDCD5 family K06875 - - 0.00000000000000000000000000000000306 130.0
YYD2_k127_4081482_15 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03540 - 3.1.26.5 0.00000000000000000000004937 101.0
YYD2_k127_4081482_16 adenylosuccinate lyase K01756 - 4.3.2.2 0.0000000000000000000001113 100.0
YYD2_k127_4081482_17 regulatory protein, arsR - - - 0.0000000000000000000001166 100.0
YYD2_k127_4081482_18 Cytidylyltransferase K19712 - 2.7.7.62 0.00000000000000000005212 98.0
YYD2_k127_4081482_19 ribosomal protein K02978 - - 0.0000000000000001367 80.0
YYD2_k127_4081482_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 400.0
YYD2_k127_4081482_3 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 345.0
YYD2_k127_4081482_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 353.0
YYD2_k127_4081482_5 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 339.0
YYD2_k127_4081482_6 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001482 288.0
YYD2_k127_4081482_7 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000001439 238.0
YYD2_k127_4081482_8 May be involved in maturation of the 30S ribosomal subunit K02966 - - 0.0000000000000000000000000000000000000000000000000000000000002215 214.0
YYD2_k127_4081482_9 Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA K14568 - 2.1.1.260 0.000000000000000000000000000000000000000000000000004924 190.0
YYD2_k127_4082072_0 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 459.0
YYD2_k127_4082072_1 Histidine-specific methyltransferase, SAM-dependent - - - 0.0000000000000000000000000000000000001717 149.0
YYD2_k127_4082072_2 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000001476 73.0
YYD2_k127_4087101_0 40-residue YVTN family beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 308.0
YYD2_k127_409927_0 resistance protein K14166 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 625.0
YYD2_k127_409927_1 Amidohydrolase family - - - 0.0000000000000000000000000005323 116.0
YYD2_k127_409927_2 - - - - 0.0000000000003229 77.0
YYD2_k127_4100237_0 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001899 244.0
YYD2_k127_4123066_0 aconitate hydratase K01681 - 4.2.1.3 4.03e-312 964.0
YYD2_k127_4123066_1 Belongs to the PdaD family K02626 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 315.0
YYD2_k127_4123066_2 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000586 225.0
YYD2_k127_4123066_3 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000002261 117.0
YYD2_k127_4127522_0 domain, Protein K01212,K12287,K20276 - 3.2.1.65 0.000003097 58.0
YYD2_k127_413008_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K03330 - 6.3.5.7 6.673e-246 774.0
YYD2_k127_413008_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K09482 - 6.3.5.7 0.0000000000000000000000000000000006347 133.0
YYD2_k127_4141090_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01581,K01586,K13747 - 4.1.1.17,4.1.1.20,4.1.1.96 8.435e-199 628.0
YYD2_k127_4141090_1 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 310.0
YYD2_k127_4141090_2 Acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000001036 101.0
YYD2_k127_4141090_3 - - - - 0.0000000000000000004505 90.0
YYD2_k127_4152138_0 - - - - 0.00000002218 63.0
YYD2_k127_4169235_0 radical SAM domain protein K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008827 356.0
YYD2_k127_4169235_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases K15510,K21835 - 1.1.98.2,1.1.98.5 0.00000000000000000000000000000000000000000000000000000001731 201.0
YYD2_k127_4169235_2 PFAM Radical SAM domain protein K04070 - 1.97.1.4 0.000000000000000000000004114 107.0
YYD2_k127_4192176_0 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000002353 175.0
YYD2_k127_4203937_0 zinc finger - - - 0.000000000000000000000002083 105.0
YYD2_k127_4207100_0 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 604.0
YYD2_k127_4207100_1 Type III restriction enzyme, res subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 441.0
YYD2_k127_4207100_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000001293 243.0
YYD2_k127_4207100_3 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000002898 195.0
YYD2_k127_4207100_4 Ribosome biogenesis protein, C-terminal K09140 - - 0.000000000000000000000000000000000000000000000000006243 185.0
YYD2_k127_4207100_5 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.0000000000000000000000000000009154 124.0
YYD2_k127_4207100_6 - - - - 0.000000000000000000003702 93.0
YYD2_k127_4207100_7 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03059 - 2.7.7.6 0.00000000000000000000653 94.0
YYD2_k127_4220009_0 Probable cobalt transporter subunit (CbtA) - - - 0.0000000000000000000000000000000000000000000000000000000000000001778 228.0
YYD2_k127_4220009_1 Domain of unknown function (DUF4443) - - - 0.00000000000000000000000000000000000000000000000000000000000006259 222.0
YYD2_k127_4220009_2 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000002796 185.0
YYD2_k127_4220009_3 Probable cobalt transporter subunit (CbtB) - - - 0.00000000000000000003071 91.0
YYD2_k127_4221435_0 Winged helix-turn-helix DNA-binding - - - 0.000000000000000000000000000000000000002782 152.0
YYD2_k127_4223709_0 Catalyzes the NAD(P)( )-dependent oxidation of D-glucose to D-gluconate via gluconolactone. Can utilize both NAD( ) and NADP( ) as electron acceptor. Is involved in the degradation of glucose through a K00148 - 1.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 331.0
YYD2_k127_4223709_1 - - - - 0.000002452 51.0
YYD2_k127_424861_0 UV-endonuclease UvdE - - - 0.000000000000000000000000000000000000000000000000000000000000001363 224.0
YYD2_k127_424861_1 UV-endonuclease UvdE K13281 - - 0.000002832 49.0
YYD2_k127_4262308_0 PFAM Hemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000002494 72.0
YYD2_k127_4265146_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000008169 172.0
YYD2_k127_4270334_0 Alpha/beta hydrolase family - - - 0.000007298 50.0
YYD2_k127_4270334_1 integrase family - - - 0.000449 46.0
YYD2_k127_427461_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000001339 225.0
YYD2_k127_427461_1 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 - 4.1.1.23 0.00000000000000000000000000000000000000002136 164.0
YYD2_k127_427461_2 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0004157 50.0
YYD2_k127_4302796_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K17830 - 1.3.1.101,1.3.7.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000674 498.0
YYD2_k127_4302796_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.0000000000000000000000000000000000001957 145.0
YYD2_k127_4302796_2 - - - - 0.00000000000000000001344 94.0
YYD2_k127_430283_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 533.0
YYD2_k127_430283_1 including yeast histone deacetylase and acetoin utilization protein K04768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004784 302.0
YYD2_k127_430283_2 - - - - 0.00000000000000000000000000002373 121.0
YYD2_k127_430283_3 cheY-homologous receiver domain - - - 0.000000000000005314 79.0
YYD2_k127_4303138_0 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 325.0
YYD2_k127_4303138_1 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000004295 203.0
YYD2_k127_4303138_2 GHMP kinases N terminal domain K00891 - 2.7.1.71 0.00000000000000000000000000000000006815 138.0
YYD2_k127_4303344_0 Uncharacterised BCR, YnfA/UPF0060 family K09771 - - 0.000000000000000000000000000000000000000000000001597 176.0
YYD2_k127_4303344_1 PFAM Uncharacterised BCR, YnfA UPF0060 family K09771 - - 0.000000000000000000000000000000000000000000004465 166.0
YYD2_k127_4304136_0 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K20989 - - 0.000000000000000000000003485 106.0
YYD2_k127_4304136_1 multicopper - - - 0.0000000000000001644 84.0
YYD2_k127_4304136_2 Uncharacterized conserved protein (DUF2196) - - - 0.0000000000000002486 81.0
YYD2_k127_4306315_0 NADH ubiquinone oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000004497 216.0
YYD2_k127_4306315_1 PFAM Like-Sm ribonucleoprotein, core - - - 0.00000000000000000000000000000000000000000000000000000000007082 207.0
YYD2_k127_4306315_2 Methyltransferase type 11 K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000024 167.0
YYD2_k127_4306315_3 - - - - 0.0000000000000000000000000000000000001786 141.0
YYD2_k127_4306315_4 Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates K18532 - 2.7.4.3 0.000000000000000000000000000000000006431 143.0
YYD2_k127_4306315_5 Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs K18779 - 2.4.2.48 0.0000000000000000000000000000003267 124.0
YYD2_k127_4311339_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 7.458e-241 751.0
YYD2_k127_433358_0 Protein of unknown function (DUF1264) - - - 0.000000000000000001505 93.0
YYD2_k127_4356370_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002349 286.0
YYD2_k127_4360133_0 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000003494 61.0
YYD2_k127_4365818_0 integrase family - - - 0.0009359 48.0
YYD2_k127_4369041_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000001644 160.0
YYD2_k127_4379374_0 response regulator, receiver - - - 0.00000000000000000000002916 104.0
YYD2_k127_4379374_1 Polysaccharide deacetylase - - - 0.0005679 45.0
YYD2_k127_4379374_2 Polysaccharide deacetylase - - - 0.0008962 48.0
YYD2_k127_4385566_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 541.0
YYD2_k127_4385566_1 Chorismate mutase type II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 496.0
YYD2_k127_4385566_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 471.0
YYD2_k127_4385566_3 GHMP kinases N terminal domain K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000193 190.0
YYD2_k127_4385566_4 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000011 194.0
YYD2_k127_4386887_0 - - - - 0.0000000000000000000000000000000004234 141.0
YYD2_k127_4387728_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000001233 216.0
YYD2_k127_4387728_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K09759 - 6.1.1.23 0.000000000000000000000006819 101.0
YYD2_k127_4387728_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000134 66.0
YYD2_k127_4392278_0 Cupin superfamily (DUF985) K09705 - - 0.0000000000000000000000000000000000000000006015 162.0
YYD2_k127_43939_0 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000002476 240.0
YYD2_k127_43939_1 N-4 methylation of cytosine K00571 - 2.1.1.72 0.00000002429 57.0
YYD2_k127_4398363_0 - - - - 0.00000000000000000000000000004587 127.0
YYD2_k127_4402102_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007147 272.0
YYD2_k127_4402102_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000008561 244.0
YYD2_k127_4403193_0 ABC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 595.0
YYD2_k127_4403193_1 - - - - 0.000000000000000000000000000000000000008339 149.0
YYD2_k127_4417306_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 615.0
YYD2_k127_4417306_1 TIGRFAM 2-methylcitrate synthase citrate synthase II K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005139 587.0
YYD2_k127_4417306_2 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005133 304.0
YYD2_k127_4417306_3 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004348 286.0
YYD2_k127_4417306_4 RecA RadA K04482,K04483 - - 0.0000000000000000000000000000000000003605 149.0
YYD2_k127_4417306_5 PUA domain K07575 - - 0.000000000000000000000000000000000001629 143.0
YYD2_k127_4417306_6 S-adenosylmethionine synthetase K00789 - 2.5.1.6 0.0000000000000000000000000000000004233 132.0
YYD2_k127_4417306_7 snRNP Sm proteins K04796 - - 0.00000000000000000000000000000005802 128.0
YYD2_k127_4461499_0 Cellulase (glycosyl hydrolase family 5) K05991 - 3.2.1.123 0.000000000000001707 90.0
YYD2_k127_4461499_1 GMC oxidoreductase K03333 - 1.1.3.6 0.000000001595 69.0
YYD2_k127_4467380_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 498.0
YYD2_k127_448509_0 - - - - 0.0000000000000000000000000000000000000000000000001616 180.0
YYD2_k127_448509_1 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02869 - - 0.000000000000000000000000000000007905 129.0
YYD2_k127_450335_0 beta-1,4-mannooligosaccharide phosphorylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001152 242.0
YYD2_k127_450335_1 PFAM Glycosyl transferase family 2 K07011,K11936 - - 0.000000000000000000000000000000000000000000000000000000000003675 226.0
YYD2_k127_450335_2 Pyruvate phosphate dikinase K01006 - 2.7.9.1 0.00000000000000000000000000000000000000000000000000000000001349 215.0
YYD2_k127_450335_3 PFAM Adenosine specific kinase K09129 - - 0.00000000000000000000000000000000000000000000000000000000005935 208.0
YYD2_k127_4505680_0 Dioxygenase K03381 - 1.13.11.1 0.0000000000000001576 85.0
YYD2_k127_4508882_0 Zinc finger, C2H2 type - - - 0.000000000000001316 78.0
YYD2_k127_4515909_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K01953,K06927 - 6.3.1.14,6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009548 543.0
YYD2_k127_4515909_1 COG1335 Amidases related to nicotinamidase K09020 - 3.5.1.110 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005531 299.0
YYD2_k127_4519062_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K03234 - - 0.0 1298.0
YYD2_k127_4519062_1 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 497.0
YYD2_k127_4519062_10 serine-type endopeptidase activity - - - 0.0000000000000000003385 94.0
YYD2_k127_4519062_11 - - - - 0.00000000000001608 74.0
YYD2_k127_4519062_2 MiaB-like tRNA modifying enzyme K15865 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 486.0
YYD2_k127_4519062_3 Mannosyl-3-phosphoglycerate synthase K05947 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.217 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 461.0
YYD2_k127_4519062_4 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 422.0
YYD2_k127_4519062_5 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000552 391.0
YYD2_k127_4519062_6 Archaeal transcriptional regulator TrmB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 347.0
YYD2_k127_4519062_7 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000000000000000000969 205.0
YYD2_k127_4519062_8 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000000000000000000001203 198.0
YYD2_k127_4519062_9 - - - - 0.00000000000000000000000000000000000001931 156.0
YYD2_k127_4520838_0 - - - - 0.000000000000000000000000000000000000000000000000000552 187.0
YYD2_k127_4527815_0 response regulator, receiver - - - 0.00000000000000000000009564 102.0
YYD2_k127_4530234_0 Sodium hydrogen exchanger K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000001278 242.0
YYD2_k127_4530234_1 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000000000000000000000007963 183.0
YYD2_k127_4530234_2 - - - - 0.0000000000000000000000000122 115.0
YYD2_k127_4530234_3 PQ loop repeat - - - 0.00000000001761 68.0
YYD2_k127_4530390_0 Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004004 374.0
YYD2_k127_4530390_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000003398 184.0
YYD2_k127_4530390_2 - - - - 0.00000000000000000000000000215 115.0
YYD2_k127_4530741_0 RNA-metabolising metallo-beta-lactamase K07041 - - 9.482e-203 648.0
YYD2_k127_4530741_1 Putative zinc- or iron-chelating domain K06940 - - 0.0000003193 53.0
YYD2_k127_45328_0 HNH nucleases - - - 0.00000000000000000001823 100.0
YYD2_k127_45328_1 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000001491 88.0
YYD2_k127_4542343_0 NurA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 363.0
YYD2_k127_4542343_1 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 293.0
YYD2_k127_4542343_3 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000002357 91.0
YYD2_k127_4542343_4 Glyoxalase-like domain K01759 - 4.4.1.5 0.0000000000005784 74.0
YYD2_k127_4543798_0 CBS domain - - - 0.0000002059 63.0
YYD2_k127_4543798_1 CBS domain containing protein - - - 0.0003054 53.0
YYD2_k127_4549230_0 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000213 218.0
YYD2_k127_4549230_1 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000006553 177.0
YYD2_k127_4549230_2 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000002642 150.0
YYD2_k127_4552616_0 COG3316 Transposase and inactivated derivatives - - - 0.00000000001155 73.0
YYD2_k127_457036_0 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K16306 - 2.2.1.10,4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 399.0
YYD2_k127_457036_1 Catalyzes the oxidative deamination and cyclization of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid (ADH) to yield 3- dehydroquinate (DHQ), which is fed into the canonical shikimic pathway of aromatic amino acid biosynthesis K11646 - 1.4.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 342.0
YYD2_k127_457036_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.00000000000000000000000000000000000000000000000000000000000003897 222.0
YYD2_k127_457036_3 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000005317 70.0
YYD2_k127_4575340_0 - - - - 0.000000000231 64.0
YYD2_k127_4582462_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000001223 222.0
YYD2_k127_4582462_1 PFAM Isochorismatase - - - 0.0000000000000000000000000000000000000000000000000001261 192.0
YYD2_k127_45887_0 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001294 239.0
YYD2_k127_45887_1 thymidylate kinase K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000001461 223.0
YYD2_k127_4615658_0 MafB19-like deaminase K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000008814 257.0
YYD2_k127_4615658_1 PFAM TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007792 260.0
YYD2_k127_46222_0 DEAD DEAH box helicase K05592 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 522.0
YYD2_k127_46222_1 PFAM Hemolysin-type calcium-binding repeat (2 copies) - - - 0.000000003648 64.0
YYD2_k127_4627915_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 2.118e-316 974.0
YYD2_k127_4627915_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.248e-253 791.0
YYD2_k127_4627915_2 acetolactate synthase, small K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000001929 243.0
YYD2_k127_4627915_3 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.000000000000000000000000000000000000000000000000000000000000000001797 229.0
YYD2_k127_4638600_0 Belongs to the peptidase M50B family - GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008996 348.0
YYD2_k127_4663892_0 Sodium hydrogen exchanger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 584.0
YYD2_k127_4663892_1 Domain of unknown function (DUF202) K00389 - - 0.00000000000000000000004537 104.0
YYD2_k127_466506_0 response regulator receiver - - - 0.00000000000003624 77.0
YYD2_k127_466506_1 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000006355 52.0
YYD2_k127_4672851_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 301.0
YYD2_k127_4677136_1 zinc finger - - - 0.000000001292 61.0
YYD2_k127_4680336_0 Belongs to the carbamoyltransferase HypF family K04656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 371.0
YYD2_k127_4680336_1 PFAM Alcohol dehydrogenase GroES-like domain K00001,K13953,K18382 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002735 281.0
YYD2_k127_4688248_0 PFAM Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 1.849e-229 734.0
YYD2_k127_4688248_1 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003728 392.0
YYD2_k127_4688248_2 Nickel-dependent hydrogenase - - - 0.000000000000000000000000000000000000000000002383 173.0
YYD2_k127_4688248_3 PFAM class II aldolase adducin family protein K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000002106 166.0
YYD2_k127_4688248_4 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.000000000000000005796 89.0
YYD2_k127_4688248_5 Nickel-dependent hydrogenase K17993 - 1.12.1.3,1.12.1.5 0.00000000000007929 75.0
YYD2_k127_4688248_6 hydrogenase large subunit K00436,K14126 - 1.12.1.2,1.8.98.5 0.00000000001811 66.0
YYD2_k127_4688895_0 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000002339 205.0
YYD2_k127_4688895_1 - - - - 0.00000000000000000000000001355 113.0
YYD2_k127_4690840_0 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 370.0
YYD2_k127_4690840_1 - - - - 0.000003528 56.0
YYD2_k127_4691253_0 PFAM Creatininase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000001898 217.0
YYD2_k127_4691253_1 Protein tyrosine kinase - - - 0.00000000000000001643 89.0
YYD2_k127_4691852_0 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 310.0
YYD2_k127_4691852_1 elongation factor Tu - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 310.0
YYD2_k127_4691852_2 - - - - 0.0000000000000000000003512 100.0
YYD2_k127_4692154_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 1.643e-269 852.0
YYD2_k127_4692154_1 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 580.0
YYD2_k127_4692154_2 Predicted membrane protein (DUF2070) K08979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008746 476.0
YYD2_k127_4692154_3 kinase, sugar kinase superfamily K06982 - 2.7.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 296.0
YYD2_k127_4692154_4 Pfam:DUF137 K09722 - 6.3.2.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009665 275.0
YYD2_k127_4692154_5 Belongs to the SUI1 family K03113 - - 0.00000000000000000000000000000000000000000000000000001024 190.0
YYD2_k127_4692154_6 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.00000000000000000000000000000000000000000000002159 180.0
YYD2_k127_4692154_7 Sec61beta family - - - 0.00000000000000000001786 91.0
YYD2_k127_4692154_8 TIGRFAM methyltransferase FkbM family - - - 0.000000002118 61.0
YYD2_k127_4692154_9 protein methyltransferase activity - - - 0.000842 46.0
YYD2_k127_4695198_0 - - - - 0.0000000003059 65.0
YYD2_k127_4695198_1 Sensory domain in DIguanylate Cyclases and Two-component system - - - 0.0009976 49.0
YYD2_k127_4713123_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001423 269.0
YYD2_k127_4713123_1 TQO small subunit DoxD K15977 - - 0.00002396 52.0
YYD2_k127_4718708_0 - - - - 0.0000000000000000000004504 96.0
YYD2_k127_4718708_1 - - - - 0.0000000000000002337 84.0
YYD2_k127_4718708_2 Transcriptional regulator - - - 0.00000003189 58.0
YYD2_k127_4718708_3 DsrE/DsrF-like family - - - 0.0002045 50.0
YYD2_k127_4722844_0 response regulator, receiver - - - 0.0000000005223 67.0
YYD2_k127_4722844_1 response regulator receiver K07720 - - 0.00001303 50.0
YYD2_k127_4730830_0 - - - - 0.00000000000001537 78.0
YYD2_k127_4730830_1 CHRD domain - - - 0.0008767 48.0
YYD2_k127_4733862_0 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.000000000000000000000000000000000000000000000004428 182.0
YYD2_k127_4733862_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.00000000000000000000000000000000000000005791 158.0
YYD2_k127_4734337_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 383.0
YYD2_k127_4739505_0 PFAM Copper binding proteins, plastocyanin azurin family - - - 0.00000000000000000000000000000000000000000000000002647 183.0
YYD2_k127_4739505_1 - - - - 0.0000000000000000000000000000000000007311 142.0
YYD2_k127_4739505_2 helix_turn_helix ASNC type K03718 - - 0.00000000000004821 72.0
YYD2_k127_4759643_0 Succinyl-CoA ligase like flavodoxin domain K18593 - - 9.872e-313 972.0
YYD2_k127_4759643_1 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 609.0
YYD2_k127_4759643_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003403 253.0
YYD2_k127_4759643_3 Zinc finger domain - - - 0.0000000000000002615 82.0
YYD2_k127_4766317_0 response regulator, receiver - - - 0.00000000000005417 76.0
YYD2_k127_4773057_0 Alpha mannosidase, middle domain K01191 - 3.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 355.0
YYD2_k127_4778108_0 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000002703 132.0
YYD2_k127_4778108_1 Transcriptional regulator - - - 0.0000000000000134 76.0
YYD2_k127_477867_0 Aminotransferase class-V - - - 2.73e-196 616.0
YYD2_k127_477867_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 414.0
YYD2_k127_477867_2 Belongs to the peptidase M24B family K01262,K01271 - 3.4.11.9,3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 380.0
YYD2_k127_477867_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009899 345.0
YYD2_k127_477867_4 Peptidyl-prolyl cis-trans K01802 - 5.2.1.8 0.000000000000000000000000000002189 121.0
YYD2_k127_4779713_1 DUF72 domain containing protein - - - 0.0000000000000000000000001206 108.0
YYD2_k127_4779713_2 Protein of unknown function DUF72 - - - 0.0000001378 54.0
YYD2_k127_4784743_0 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 492.0
YYD2_k127_4784743_1 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009048 481.0
YYD2_k127_4784743_2 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000407 478.0
YYD2_k127_4784743_3 Phosphomethylpyrimidine kinase K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 377.0
YYD2_k127_4784743_4 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 352.0
YYD2_k127_4784743_5 - - - - 0.00000000000000000000000000000000000000000003614 172.0
YYD2_k127_4784743_6 DnaJ molecular chaperone homology domain K03686 - - 0.00000000000000000000000000000000000002918 147.0
YYD2_k127_4784743_7 ATP synthase (F/14-kDa) subunit K02122 - - 0.00000000000000000000000000000000001428 138.0
YYD2_k127_4798013_0 phenylalanyl-tRNA synthetase, beta subunit K01890 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 392.0
YYD2_k127_4801126_0 Amino acid kinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 515.0
YYD2_k127_4801126_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006952 397.0
YYD2_k127_4801126_2 phosphoribosyltransferase K07101 - - 0.0000000000000000000000007309 109.0
YYD2_k127_4812960_0 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000009959 67.0
YYD2_k127_4821673_0 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000007452 224.0
YYD2_k127_4822516_0 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 306.0
YYD2_k127_4822516_1 protein (ATP-grasp superfamily) K07159 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002183 248.0
YYD2_k127_482381_0 Nicotinamide-nucleotide adenylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000002514 229.0
YYD2_k127_482381_1 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 - - 0.00000000000000000000000000000000000000007381 152.0
YYD2_k127_482381_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000001589 88.0
YYD2_k127_4842854_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004622 406.0
YYD2_k127_4842854_1 TIGRFAM phosphate ABC transporter K02038 - - 0.000000000004053 68.0
YYD2_k127_4846697_0 - - - - 0.00000000001827 72.0
YYD2_k127_4848643_0 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000001717 126.0
YYD2_k127_4849345_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases K15510,K21835 - 1.1.98.2,1.1.98.5 0.000000000000000000000000000000000000000000000000000000000000000003122 239.0
YYD2_k127_4849345_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000003007 74.0
YYD2_k127_4849345_2 AAA domain - - - 0.00003401 48.0
YYD2_k127_4850563_0 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004003 278.0
YYD2_k127_4850563_1 Belongs to the MCM family K10726 - - 0.000000000000000000000000000000000000000000001374 173.0
YYD2_k127_4855687_0 Belongs to the class-II aminoacyl-tRNA synthetase family K01868 - 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 587.0
YYD2_k127_4855687_1 Ferritin-like domain K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 376.0
YYD2_k127_4855687_2 DHHA1 domain K07463 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 363.0
YYD2_k127_4855687_3 transferase activity, transferring glycosyl groups K00752 - 2.4.1.212 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007294 328.0
YYD2_k127_4855687_4 Belongs to the carbohydrate kinase PfkB family K00852 - 2.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001791 286.0
YYD2_k127_4855687_5 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000771 231.0
YYD2_k127_4855687_6 - - - - 0.000000000000000000006433 93.0
YYD2_k127_4855687_7 Belongs to the P(II) protein family K04751 - - 0.0000000002006 66.0
YYD2_k127_4858136_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 7.548e-266 826.0
YYD2_k127_4858136_1 Isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007758 483.0
YYD2_k127_4858136_2 LAO AO transport system ATPase K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 403.0
YYD2_k127_4858136_3 B12 binding domain K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000001273 220.0
YYD2_k127_4858136_4 Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000000000000000001636 208.0
YYD2_k127_4859037_0 Catalyzes the ATP- and formate-dependent formylation of 5-aminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'- monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1- beta-d-ribofuranosyl 5'-monophosphate (FAICAR) in the absence of folates K06863 - 6.3.4.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000961 464.0
YYD2_k127_4859037_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000005464 216.0
YYD2_k127_4859037_2 PBS lyase HEAT-like repeat K06072 - 1.14.99.29 0.0000000000000000000000000000000000000000000000000000000003934 206.0
YYD2_k127_4859037_3 response regulator, receiver K07668,K07669 - - 0.0000000000000000000000002218 110.0
YYD2_k127_4865638_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 370.0
YYD2_k127_4865638_1 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 347.0
YYD2_k127_4865638_2 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 319.0
YYD2_k127_4865638_3 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000008668 229.0
YYD2_k127_4865638_4 - - - - 0.0000000000000000000000000000000000000000000000000183 181.0
YYD2_k127_4865638_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000006709 91.0
YYD2_k127_4865638_6 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.0001911 49.0
YYD2_k127_4866192_0 Periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007168 308.0
YYD2_k127_4866192_1 - - - - 0.000000244 61.0
YYD2_k127_4878909_0 Large family of predicted nucleotide-binding domains K06865 - - 9.55e-240 754.0
YYD2_k127_4878909_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 481.0
YYD2_k127_4878909_2 Prephenate dehydratase K04518 - 4.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 302.0
YYD2_k127_4878909_3 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009498 270.0
YYD2_k127_4878909_4 F5/8 type C domain - - - 0.000000000000000000000000000000000000000000000000000003985 200.0
YYD2_k127_4878909_5 Periplasmic solute binding protein K09815 - - 0.000000000000000000000000000000000000003095 150.0
YYD2_k127_4878909_6 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.000000000000000000000000000002233 126.0
YYD2_k127_4878909_7 - - - - 0.0000000000000000000005522 101.0
YYD2_k127_4880395_0 DNA-directed RNA polymerase, alpha subunit 40 kD subunit K03047 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 317.0
YYD2_k127_4880395_1 - - - - 0.00000002999 59.0
YYD2_k127_4881344_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K00313 - - 1.476e-254 798.0
YYD2_k127_4881344_1 Electron transfer flavoprotein domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 504.0
YYD2_k127_4881344_2 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 390.0
YYD2_k127_4881344_3 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000000002155 137.0
YYD2_k127_4881344_5 Multicopper oxidase - - - 0.00000000000004525 77.0
YYD2_k127_4881344_6 PQ loop repeat - - - 0.0000000000001476 73.0
YYD2_k127_4884106_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 9.448e-247 768.0
YYD2_k127_4884106_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K03231 - - 4.237e-239 743.0
YYD2_k127_4884106_2 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000000004454 193.0
YYD2_k127_4884106_3 protein conserved in archaea K09723 - - 0.00000000000000000000000000000000001932 141.0
YYD2_k127_4884106_4 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000009194 106.0
YYD2_k127_4884911_0 - - - - 0.00000000000000359 81.0
YYD2_k127_4886111_0 mttA/Hcf106 family K03116 - - 0.0000000000000000000007317 98.0
YYD2_k127_4887944_0 TIGRFAM phosphate ABC transporter K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005925 441.0
YYD2_k127_4890927_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 364.0
YYD2_k127_4891445_0 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000003412 157.0
YYD2_k127_4892017_0 Belongs to the class-II aminoacyl-tRNA synthetase family K01868 - 6.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 303.0
YYD2_k127_4892941_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 334.0
YYD2_k127_4892941_1 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001043 294.0
YYD2_k127_4892941_2 Glycogen debranching enzyme K01194 - 3.2.1.28 0.0000000000000000000000000000000000009151 141.0
YYD2_k127_4895358_0 Universal stress protein - - - 0.000000000000000000000000000000000003542 142.0
YYD2_k127_4895358_1 signal transduction protein with CBS domains - - - 0.00000000000000359 81.0
YYD2_k127_4895358_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016491,GO:0016620,GO:0016903,GO:0019318,GO:0019319,GO:0036094,GO:0043891,GO:0044238,GO:0044281,GO:0044283,GO:0046364,GO:0048037,GO:0050661,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.2.1.12 0.00000004781 54.0
YYD2_k127_4896905_0 LOR SDH bifunctional - - - 1.257e-195 617.0
YYD2_k127_4896905_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 595.0
YYD2_k127_4896905_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 565.0
YYD2_k127_4896905_3 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000005455 201.0
YYD2_k127_4896905_4 - - - - 0.00000000000000000000000000000000000000001512 156.0
YYD2_k127_4896905_5 HD domain K07023 - - 0.000000000000000000000000000000000000001559 153.0
YYD2_k127_4896905_6 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000001989 132.0
YYD2_k127_4903628_0 Belongs to the TPP enzyme family K00156,K00158 - 1.2.3.3,1.2.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008505 594.0
YYD2_k127_4904976_0 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000173 265.0
YYD2_k127_4904976_1 Transcriptional regulator K07332 - - 0.000000000000000000000001793 112.0
YYD2_k127_4904976_2 Protein of unknown function (DUF1059) - - - 0.00000000152 60.0
YYD2_k127_4904976_3 HxlR-like helix-turn-helix - - - 0.000002095 50.0
YYD2_k127_4904976_4 Belongs to the peptidase S1C family K04772 - - 0.00001303 50.0
YYD2_k127_49121_0 TIGRFAM precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 - 2.1.1.289 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 326.0
YYD2_k127_49121_1 protein (ATP-grasp superfamily) K07159 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001442 269.0
YYD2_k127_4916738_0 Glucose dehydrogenase C-terminus K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007973 435.0
YYD2_k127_4920539_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 540.0
YYD2_k127_4920539_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044 384.0
YYD2_k127_4920539_10 Bacterial lipoate protein ligase C-terminus K03800 - 6.3.1.20 0.000000008401 60.0
YYD2_k127_4920539_11 PFAM biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.00000006724 56.0
YYD2_k127_4920539_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008609 365.0
YYD2_k127_4920539_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 326.0
YYD2_k127_4920539_4 Chlorophyllase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000001059 256.0
YYD2_k127_4920539_5 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000005059 140.0
YYD2_k127_4920539_6 Protocatechuate 3,4-dioxygenase beta subunit - - - 0.0000000000000000000000000000004215 126.0
YYD2_k127_4920539_7 Ion transport protein K10716 - - 0.0000000000000000000001732 108.0
YYD2_k127_4920539_8 Dioxygenase K03381 - 1.13.11.1 0.0000000000002033 72.0
YYD2_k127_4920539_9 - - - - 0.00000000002268 68.0
YYD2_k127_4924600_0 DHHA1 domain K07463 - - 0.000000000000000000000000000000000000000000000000000000000000000009092 237.0
YYD2_k127_4924600_1 ribosomal protein K02956 - - 0.000000000000000000000000000000000000000000000000000000000000003317 219.0
YYD2_k127_4939511_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 448.0
YYD2_k127_4939511_1 Belongs to the UPF0218 family K09735 - - 0.000000000000000000000000000000000003414 143.0
YYD2_k127_4949799_0 Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 368.0
YYD2_k127_4949799_1 HELICc2 - - - 0.000000000000000000000000000000000000000000001271 168.0
YYD2_k127_4949799_2 phosphoglycerate mutase K15635 - 5.4.2.12 0.00000000000000000000002062 104.0
YYD2_k127_4949799_4 ATP-binding region, ATPase domain protein K02482,K14986 - 2.7.13.3 0.00000000002995 70.0
YYD2_k127_4949799_6 Magnesium chelatase, subunit ChlI - - - 0.0003393 47.0
YYD2_k127_4959752_1 Circadian clock protein KaiC - - - 0.00000000001502 74.0
YYD2_k127_4960511_0 - - - - 0.000000000000000000000000001899 120.0
YYD2_k127_4960511_1 IMP dehydrogenase activity - - - 0.00000000004068 72.0
YYD2_k127_4967929_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.000000000000000000000000000000000000000000000000000003202 202.0
YYD2_k127_4967929_1 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000003549 161.0
YYD2_k127_4968114_0 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 599.0
YYD2_k127_4968114_1 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000002736 251.0
YYD2_k127_4977413_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000002291 243.0
YYD2_k127_4977413_1 Radical SAM - - - 0.0000000000000000007077 85.0
YYD2_k127_4981027_0 S-adenosylmethionine synthetase K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000961 585.0
YYD2_k127_4981027_1 RIO-like serine threonine protein kinase fused to N-terminal HTH domain K07179 - 2.7.11.1 0.000000000000000000000000000000000000000000001667 176.0
YYD2_k127_4981513_0 Chromate resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000136 226.0
YYD2_k127_4981513_1 Purple acid phosphatase K22390 GO:0003674,GO:0003824,GO:0003993,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0044237 - 0.000452 51.0
YYD2_k127_5003389_0 PFAM ABC transporter related K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 331.0
YYD2_k127_5013165_0 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 372.0
YYD2_k127_5013218_0 Cobalamin B12-binding domain protein K16955,K22491 - - 0.00000000000000000000000000106 117.0
YYD2_k127_5013218_1 - - - - 0.00000000000000000001541 93.0
YYD2_k127_5014319_0 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 344.0
YYD2_k127_5014319_1 Methyltransferase type 11 K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000136 267.0
YYD2_k127_5014319_2 Major Intrinsic Protein K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004178 250.0
YYD2_k127_5014319_3 PFAM low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000001354 183.0
YYD2_k127_5014319_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000004757 179.0
YYD2_k127_5014319_5 Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system K10441,K10545,K10548 - 3.6.3.17 0.000000000000000000000000000000000000000000001527 168.0
YYD2_k127_5017715_0 phage tail tape measure protein - - - 0.00000001149 69.0
YYD2_k127_5024193_0 Transcriptional regulator - - - 0.00000000000000218 78.0
YYD2_k127_5026220_0 Belongs to the complex I 49 kDa subunit family K03935 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006941 582.0
YYD2_k127_5031529_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 2.944e-238 743.0
YYD2_k127_5031529_1 factor TFIIB K03124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 297.0
YYD2_k127_5031529_2 - - - - 0.00000000000000000000000000000000007546 135.0
YYD2_k127_5044028_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 505.0
YYD2_k127_5044028_1 ATPase family associated with various cellular activities (AAA) K04800 - - 0.000000000000000000000000000000000000000000000000000000000000000000007474 241.0
YYD2_k127_5044028_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center K02992 - - 0.0000000000001909 70.0
YYD2_k127_5044694_1 D-glucuronyl C5-epimerase C-terminus - - - 0.0000000000000000002248 98.0
YYD2_k127_5044730_0 Carbamoyl-phosphate synthase L chain K18603 - 6.4.1.2,6.4.1.3 4.585e-238 744.0
YYD2_k127_5044730_1 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K18604 - 2.1.3.15,6.4.1.2,6.4.1.3 6.416e-233 730.0
YYD2_k127_5044730_2 Cysteine desulfurase K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 459.0
YYD2_k127_5044730_3 tRNA methyl transferase K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 292.0
YYD2_k127_5044730_4 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000002874 206.0
YYD2_k127_5044730_5 biotin carboxyl carrier K00627,K01571,K15037,K18605 - 2.3.1.12,4.1.1.3 0.00000000000000000000000000000000000000000004043 166.0
YYD2_k127_5045136_0 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000006372 173.0
YYD2_k127_5047442_0 antibiotic catabolic process K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 453.0
YYD2_k127_5047442_1 DEAD DEAH box helicase K06877 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 362.0
YYD2_k127_5047442_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000267 126.0
YYD2_k127_5047442_4 DSBA-like thioredoxin domain - - - 0.0000007855 53.0
YYD2_k127_5048251_0 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000002877 170.0
YYD2_k127_5050894_0 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K20989 - - 0.000000000000000000000000000000002942 135.0
YYD2_k127_5050894_1 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000003592 78.0
YYD2_k127_5051298_0 Cobalamin synthesis G C-terminus K02189 - 3.7.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 417.0
YYD2_k127_5051298_1 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 379.0
YYD2_k127_5051298_2 Cobalt chelatase (CbiK) K06042 - 5.4.99.60,5.4.99.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001306 286.0
YYD2_k127_5051298_3 Cobalt chelatase (CbiK) K06042 - 5.4.99.60,5.4.99.61 0.0000000000000000000000000000000000000000000000000000000000000000007372 235.0
YYD2_k127_5051298_4 PFAM Polyketide cyclase dehydrase - - - 0.000000000000000000000000000001541 125.0
YYD2_k127_5051801_0 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000224 87.0
YYD2_k127_5051801_1 lactoylglutathione lyase activity - - - 0.00000000003266 66.0
YYD2_k127_5051801_2 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00003051 52.0
YYD2_k127_5052419_0 Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems to translocate with the RNA polymerase following initiation and acts by binding to the non template strand of the transcription bubble in elongation complexes K03136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002663 273.0
YYD2_k127_5052419_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002993 240.0
YYD2_k127_5052419_2 RibD C-terminal domain K14654 - 1.1.1.302 0.0000000000000000000000000000000000000000000000000000000000002818 218.0
YYD2_k127_5052419_3 DEAD DEAH box helicase K05592 - 3.6.4.13 0.00000000000000000000000000000000000000000000004304 175.0
YYD2_k127_5055449_0 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 527.0
YYD2_k127_5063480_0 Delta-aminolevulinic acid dehydratase K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.0000000000000000000000000000000000000000000000000002233 190.0
YYD2_k127_5063480_1 PFAM Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000004172 184.0
YYD2_k127_506592_1 - - - - 0.000000000000000000000328 97.0
YYD2_k127_506592_2 - - - - 0.0000000000000000000004504 96.0
YYD2_k127_5103344_0 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091,K01838,K07025 - 3.1.3.18,5.4.2.6 0.0000000000000000000001007 101.0
YYD2_k127_5103344_1 - - - - 0.000000001149 70.0
YYD2_k127_5103344_2 Haloacid dehalogenase-like hydrolase K01838 - 5.4.2.6 0.000001604 54.0
YYD2_k127_5103344_3 OsmC-like protein - - - 0.00004571 52.0
YYD2_k127_5105723_0 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000004981 221.0
YYD2_k127_5105723_1 Protein of unknown function DUF72 - - - 0.000000004948 62.0
YYD2_k127_5128304_0 DEAD DEAH box helicase K05592 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 307.0
YYD2_k127_5128304_1 Zinc finger domain - - - 0.000000000000000000000000000000000000000000000000000000000004333 218.0
YYD2_k127_5156525_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 607.0
YYD2_k127_5156525_1 Methionine synthase K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 569.0
YYD2_k127_5156525_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 290.0
YYD2_k127_5156525_4 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.00001286 48.0
YYD2_k127_5157413_0 Belongs to the ribosomal protein L31e family K02910 - - 0.00000000000000000000000000000001559 128.0
YYD2_k127_5157413_1 - - - - 0.0000000000000000001547 91.0
YYD2_k127_5157413_2 protein conserved in archaea K09723 - - 0.000000000000001515 78.0
YYD2_k127_5157413_3 Belongs to the eukaryotic ribosomal protein eL39 family K02924 - - 0.000000000000009821 74.0
YYD2_k127_5166180_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000003018 161.0
YYD2_k127_5166180_2 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000003515 156.0
YYD2_k127_5166180_3 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000167 102.0
YYD2_k127_5168683_0 Dual specificity phosphatase, catalytic domain K14165 - 3.1.3.16,3.1.3.48 0.0000000000000000000000000000000000000000000001914 173.0
YYD2_k127_5168683_1 Diacylglycerol kinase catalytic domain - - - 0.00000000000000000000000000000006095 137.0
YYD2_k127_5179035_0 Thiamine biosynthesis protein ThiC K03147 - 4.1.99.17 2.694e-206 645.0
YYD2_k127_5179035_1 COG1960 Acyl-CoA dehydrogenases K00252 - 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 516.0
YYD2_k127_5179035_2 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000001679 269.0
YYD2_k127_5179035_3 Cupin - - - 0.000000000000000001097 92.0
YYD2_k127_5179035_5 - - - - 0.00000134 55.0
YYD2_k127_5184619_0 Thiamine-binding protein - - - 0.0002817 44.0
YYD2_k127_5185855_0 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000003644 214.0
YYD2_k127_5185855_1 CHRD domain - - - 0.0000000000000000001041 96.0
YYD2_k127_5191358_0 Dodecin K09165 - - 0.000000003511 60.0
YYD2_k127_5200286_0 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.000000000000000000000000000003528 134.0
YYD2_k127_5201040_0 acid phosphatase activity K22390 GO:0000003,GO:0003674,GO:0003824,GO:0003993,GO:0004721,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005615,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005829,GO:0005911,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0007275,GO:0008150,GO:0008152,GO:0008199,GO:0008270,GO:0009267,GO:0009505,GO:0009506,GO:0009605,GO:0009791,GO:0009845,GO:0009846,GO:0009856,GO:0009987,GO:0009991,GO:0016036,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0022414,GO:0030054,GO:0030145,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0032501,GO:0032502,GO:0033554,GO:0036211,GO:0042578,GO:0042592,GO:0042594,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0044706,GO:0046872,GO:0046914,GO:0048856,GO:0048878,GO:0050801,GO:0050896,GO:0051704,GO:0051716,GO:0055044,GO:0055062,GO:0055081,GO:0055083,GO:0065007,GO:0065008,GO:0071496,GO:0071704,GO:0071944,GO:0072505,GO:0072506,GO:0090351,GO:0098771,GO:0140096,GO:1901564 - 0.000000000000000000168 100.0
YYD2_k127_5202916_0 Sodium hydrogen exchanger K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001455 285.0
YYD2_k127_5224802_0 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000001546 228.0
YYD2_k127_5225868_0 D-isomer specific 2-hydroxyacid dehydrogenase K00015 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006672 276.0
YYD2_k127_5225868_1 - - - - 0.000000000000000000000000000007873 120.0
YYD2_k127_5225868_3 - - - - 0.00000000000002483 76.0
YYD2_k127_5225868_4 - - - - 0.0000000000003753 70.0
YYD2_k127_5225868_5 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00015 - 1.1.1.26 0.000000007035 57.0
YYD2_k127_5226494_0 divalent heavy-metal cations transporter K07238 - - 0.0000000000000000000000000001575 124.0
YYD2_k127_5226690_0 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.0000000000000000000000000000000000000000000000006929 184.0
YYD2_k127_5283252_0 Peptidase family M3 K08602 - - 1.002e-215 685.0
YYD2_k127_5283252_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 375.0
YYD2_k127_5283252_2 D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo K09716 - 3.1.1.96 0.000000000000000000000000000000000000000000000000000000000000000001922 235.0
YYD2_k127_5283252_3 Binds to the 23S rRNA K02885 - - 0.00000000000000000000000000000000000000000000000000000000001593 209.0
YYD2_k127_5283252_4 ribosomal protein K02912 - - 0.00000000000000000000000000000000000000000000000000006339 190.0
YYD2_k127_5283252_5 - - - - 0.0000000000000000000000000000000000000000009504 161.0
YYD2_k127_5283534_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.824e-300 933.0
YYD2_k127_5283534_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 563.0
YYD2_k127_5283534_2 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007909 260.0
YYD2_k127_5283534_3 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008848 258.0
YYD2_k127_5283534_4 Nucleotide binding protein, PINc K07158 - - 0.00000000000000000003746 94.0
YYD2_k127_5298954_0 aspartate ornithine carbamoyltransferase carbamoyl-P binding domain K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 419.0
YYD2_k127_5298954_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000002225 140.0
YYD2_k127_5300568_0 MFS_1 like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 471.0
YYD2_k127_5300568_1 Alpha beta hydrolase K01066,K14731 - 3.1.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 452.0
YYD2_k127_531420_0 Belongs to the PdxS SNZ family K06215 - 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007802 514.0
YYD2_k127_531420_1 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000003034 252.0
YYD2_k127_531420_2 - - - - 0.00000000000000000002884 92.0
YYD2_k127_5321538_0 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 514.0
YYD2_k127_5321538_1 Archaeal ammonia monooxygenase subunit A (AmoA) K10944 - 1.14.18.3,1.14.99.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 418.0
YYD2_k127_5321538_2 Monooxygenase subunit B protein K10945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007388 259.0
YYD2_k127_5321538_3 - - - - 0.00000000000000000000000000000000000000000001337 163.0
YYD2_k127_5321538_4 - - - - 0.00000000000000000000000000000000000000105 149.0
YYD2_k127_5321538_5 ribosomal protein K02956 - - 0.000000000608 61.0
YYD2_k127_5321538_6 - - - - 0.00001996 51.0
YYD2_k127_5331517_0 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 8.511e-265 824.0
YYD2_k127_5331517_1 RNase L inhibitor, RLI K06174 - - 6.852e-248 778.0
YYD2_k127_5331517_10 FR47-like protein K03789 - 2.3.1.128 0.00000000000000000000000000000000000000000000000000000000000000000000000000009992 259.0
YYD2_k127_5331517_11 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000672 138.0
YYD2_k127_5331517_2 von Willebrand factor (vWF) type A domain - - - 6.113e-221 697.0
YYD2_k127_5331517_3 magnesium chelatase K03405 - 6.6.1.1 1.545e-204 650.0
YYD2_k127_5331517_4 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005584 604.0
YYD2_k127_5331517_5 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 515.0
YYD2_k127_5331517_6 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 436.0
YYD2_k127_5331517_7 ATPase family associated with various cellular activities (AAA) K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 392.0
YYD2_k127_5331517_8 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 335.0
YYD2_k127_5331517_9 Met-10+ like-protein K15429 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 321.0
YYD2_k127_5334270_0 Heat shock 70 kDa protein K04043 - - 3.684e-313 968.0
YYD2_k127_5334270_1 DnaJ central domain K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 504.0
YYD2_k127_5334270_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000000000000151 217.0
YYD2_k127_5334270_3 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000001173 166.0
YYD2_k127_5350221_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1204.0
YYD2_k127_5350221_1 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000007534 200.0
YYD2_k127_5350221_2 Thioredoxin K03671 - - 0.000000000000000000000000000000000000000000000002139 175.0
YYD2_k127_5368909_0 Transcriptional regulatory protein, C terminal K18344 - - 0.0000000000132 70.0
YYD2_k127_5369529_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004419 286.0
YYD2_k127_5369529_1 RNA methylase - - - 0.000000000000000000000000000000000000000000000000000000000000000004079 235.0
YYD2_k127_5369529_2 Involved in allosteric regulation of aspartate carbamoyltransferase K00610 - - 0.000000000000000000000000000000000000000000000000000001002 196.0
YYD2_k127_5369529_3 ATP synthase subunit C K02124 - - 0.0000000000000002246 82.0
YYD2_k127_5387824_0 Belongs to the MCM family K10726 - - 0.0 1059.0
YYD2_k127_5387824_1 Replication factor C K04801 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 293.0
YYD2_k127_5387824_2 GINS complex protein K09723 - - 0.00000000000000000000000000000000000000000000000000004432 192.0
YYD2_k127_5388620_0 - - - - 0.0000001042 59.0
YYD2_k127_5395514_0 Zinc-binding dehydrogenase K13979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 509.0
YYD2_k127_5395514_1 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000003767 68.0
YYD2_k127_5395514_2 pyridoxamine 5-phosphate K07005 - - 0.000000005384 58.0
YYD2_k127_5396554_0 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000001219 188.0
YYD2_k127_5396554_1 EamA-like transporter family K07790 - - 0.0001621 46.0
YYD2_k127_539952_0 ERCC4 domain K10896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 398.0
YYD2_k127_539952_1 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000006128 191.0
YYD2_k127_539952_2 ERCC3/RAD25/XPB C-terminal helicase - - - 0.0000000000001598 71.0
YYD2_k127_540170_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 3.413e-285 887.0
YYD2_k127_540170_1 TIGRFAM excinuclease ABC, C subunit K03703 - - 0.00000000000000000000000000000000000000009053 155.0
YYD2_k127_54051_0 Thiolase, N-terminal domain K00626 - 2.3.1.9 4.57e-218 681.0
YYD2_k127_54051_1 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.0000000000000000000000000000000000000000001323 163.0
YYD2_k127_5428416_0 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 388.0
YYD2_k127_5428416_1 Putative antitoxin - - - 0.00003375 50.0
YYD2_k127_5429342_0 Mediates influx of magnesium ions K03284 - - 0.0000000000000000001929 100.0
YYD2_k127_5435241_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K02858 - 4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009857 291.0
YYD2_k127_5435241_1 Catalyzes the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity K08096 - 3.5.4.29 0.000000000000000000000000000000000000000000000000000000000000000000009516 241.0
YYD2_k127_5435241_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000001399 175.0
YYD2_k127_5435241_3 Amidohydrolase family - - - 0.000000000000000000000000000000000000000103 156.0
YYD2_k127_5439671_0 - - - - 0.00001259 55.0
YYD2_k127_5439840_0 Ferritin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 329.0
YYD2_k127_5439840_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000001869 222.0
YYD2_k127_5439840_2 - - - - 0.000000000000000000000000000000000000000000004354 168.0
YYD2_k127_5439840_3 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000008737 159.0
YYD2_k127_5439840_4 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000000000342 143.0
YYD2_k127_5439840_5 - - - - 0.00000000000000000000000000002192 123.0
YYD2_k127_5443437_0 ATPase family associated with various cellular activities (AAA) K04800 - - 0.000000000000000000000000000004026 126.0
YYD2_k127_5443437_1 - K03646 - - 0.00000000000000000002347 92.0
YYD2_k127_5443437_2 - - - - 0.000000000000000007071 87.0
YYD2_k127_5446526_0 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000542 314.0
YYD2_k127_5446526_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000005562 226.0
YYD2_k127_5446526_2 - - - - 0.000000000000000001402 89.0
YYD2_k127_5450902_0 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 337.0
YYD2_k127_5450902_1 uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000001834 216.0
YYD2_k127_5450902_2 Reverse transcriptase-like K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000002703 171.0
YYD2_k127_5450902_3 - - - - 0.0000000000000000000000000000000000002929 144.0
YYD2_k127_5450902_4 Conserved hypothetical ATP binding protein K06883 - - 0.00000000000003626 76.0
YYD2_k127_5459798_0 COG0455 ATPases involved in chromosome partitioning K03496,K03609 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 298.0
YYD2_k127_5459798_1 TIGRFAM ParB RepB Spo0J family partition protein K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004088 247.0
YYD2_k127_5459798_2 Transcriptional regulatory protein, C terminal K02483,K07669 - - 0.0000000003086 66.0
YYD2_k127_5462473_0 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000004234 51.0
YYD2_k127_5464029_0 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004825 597.0
YYD2_k127_54685_0 DNA photolyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 402.0
YYD2_k127_54685_1 Glyoxalase-like domain K06996 - - 0.0000000000315 68.0
YYD2_k127_5472639_0 conserved protein implicated in secretion - - - 0.00000000000000000000000000000000000000000000000000000000000000126 225.0
YYD2_k127_5472639_1 oligoendopeptidase F - - - 0.0000000000000000000000000006275 117.0
YYD2_k127_5472639_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00002939 48.0
YYD2_k127_5479642_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family - GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016427,GO:0016428,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000005088 227.0
YYD2_k127_5479642_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 0.000003749 59.0
YYD2_k127_5489807_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02259 - - 0.000000000000000000000000001352 117.0
YYD2_k127_5489807_1 - - - - 0.00005972 45.0
YYD2_k127_5493842_0 alginic acid biosynthetic process K20276 - - 0.0000000000000000000000001174 122.0
YYD2_k127_5496862_0 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.0000000000000000000000000000000000000004148 160.0
YYD2_k127_5497790_0 protein import - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005782 261.0
YYD2_k127_5497790_1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07776 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009405,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0031323,GO:0031326,GO:0044419,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0080134,GO:0097159,GO:1901363,GO:1902882,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000001196 81.0
YYD2_k127_5497790_2 - - - - 0.0000007219 55.0
YYD2_k127_5499541_0 PFAM TCP-1 cpn60 chaperonin family K22447 - - 2.866e-282 875.0
YYD2_k127_5499541_1 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006338 492.0
YYD2_k127_5499541_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K09482 - 6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000811 402.0
YYD2_k127_5499541_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003094 255.0
YYD2_k127_5499541_4 Pyridoxamine 5'-phosphate K07005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001352 245.0
YYD2_k127_5499541_5 Transcription elongation factor Spt5 K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000001476 239.0
YYD2_k127_5499541_6 ERCC4 domain K10848 - - 0.0000000000000000000000000000000000000000000000000000000001652 209.0
YYD2_k127_5499541_7 Cytidylyltransferase-like K00952 - 2.7.7.1 0.000000000000000000000000000000000000000000000000006832 186.0
YYD2_k127_5502973_0 conserved protein implicated in secretion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005469 272.0
YYD2_k127_5502973_1 - - - - 0.00000000000000000000000000002788 121.0
YYD2_k127_5502973_2 8-amino-7-oxononanoate synthase K00639 - 2.3.1.29 0.00000000000000001782 84.0
YYD2_k127_5507710_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000002636 223.0
YYD2_k127_5507710_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000001617 205.0
YYD2_k127_5507710_2 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000001234 184.0
YYD2_k127_5507710_3 4Fe-4S binding domain K00338 - 1.6.5.3 0.0000000000000000000000000000005762 121.0
YYD2_k127_5507710_4 response regulator, receiver - - - 0.00000000000000000000002578 104.0
YYD2_k127_5524490_0 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000001857 90.0
YYD2_k127_5524490_1 Iron/zinc purple acid phosphatase-like protein C K22390 - - 0.00000000000001287 86.0
YYD2_k127_5524490_2 NHL repeat - - - 0.0000002265 54.0
YYD2_k127_5524490_3 PFAM NHL repeat containing protein - - - 0.000004927 49.0
YYD2_k127_5524490_4 zinc ion binding - - - 0.0001211 45.0
YYD2_k127_5536058_0 Belongs to the archaeal rpoM eukaryotic RPA12 RPB9 RPC11 RNA polymerase family K03057 - - 0.000000000000000000000000000000001427 132.0
YYD2_k127_5536058_1 - - - - 0.000000000000000000000000000009566 121.0
YYD2_k127_5536058_2 Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication K04802 - - 0.000000000000000000000517 96.0
YYD2_k127_5536058_3 RNA polymerase Rpb3/Rpb11 dimerisation domain K03056 - 2.7.7.6 0.00000000000000001043 85.0
YYD2_k127_5540580_0 Alpha mannosidase, middle domain K01191 - 3.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 399.0
YYD2_k127_5540580_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000377 49.0
YYD2_k127_5542574_0 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000000005519 91.0
YYD2_k127_5542574_1 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.0000000000002467 70.0
YYD2_k127_5542574_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00005684 46.0
YYD2_k127_5542875_0 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.0000000000001451 72.0
YYD2_k127_5542875_1 - - - - 0.00001155 52.0
YYD2_k127_5561613_0 - - - - 0.00000000000000000000000000000000000000000000001731 184.0
YYD2_k127_5565070_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000879 271.0
YYD2_k127_5565070_1 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000001097 268.0
YYD2_k127_5565070_2 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000004953 108.0
YYD2_k127_5565070_4 endonuclease K00986 - 2.7.7.49 0.0000000000000001374 82.0
YYD2_k127_5565070_5 - - - - 0.00000000000881 75.0
YYD2_k127_5573447_0 Mechanosensitive ion channel - - - 0.0000000000000126 79.0
YYD2_k127_5573447_1 Predicted membrane protein (DUF2254) - - - 0.0001765 46.0
YYD2_k127_5584050_0 cytochrome P450 K00493,K21201 - 1.11.1.7,1.14.14.1 0.000000000000000000000000000000000000000000000221 175.0
YYD2_k127_5584050_1 NHL repeat - - - 0.0000006864 51.0
YYD2_k127_5589093_0 Glycogen debranching enzyme K01194 - 3.2.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004313 351.0
YYD2_k127_5589093_1 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000001129 148.0
YYD2_k127_5589996_0 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000001193 216.0
YYD2_k127_5590916_0 DNA polymerase K02319 - 2.7.7.7 0.0 1149.0
YYD2_k127_5590916_1 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 357.0
YYD2_k127_5590916_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000287 236.0
YYD2_k127_5590916_3 COG NOG14600 non supervised orthologous group - - - 0.000000000000000004259 89.0
YYD2_k127_561392_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000004877 169.0
YYD2_k127_5634629_0 - - - - 0.0000000000000000000000000001887 117.0
YYD2_k127_5634629_1 Belongs to the peptidase M10A family K08002 - - 0.00002409 54.0
YYD2_k127_5647996_0 Belongs to the phosphohexose mutase family K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 578.0
YYD2_k127_5647996_1 Formyl transferase K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 413.0
YYD2_k127_5656842_0 Translation initiation factor 2, alpha subunit K03237 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 353.0
YYD2_k127_5656842_1 ATP corrinoid adenosyltransferase K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000199 205.0
YYD2_k127_5656842_2 more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA K11130 - - 0.0000000000004905 70.0
YYD2_k127_5656842_3 Periplasmic copper-binding protein (NosD) - - - 0.0003655 51.0
YYD2_k127_5671330_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000573 469.0
YYD2_k127_5671330_1 aspartate-semialdehyde dehydrogenase K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007566 454.0
YYD2_k127_5692184_0 - - - - 0.000000000003848 73.0
YYD2_k127_5696120_0 NADH ubiquinone oxidoreductase subunit 2 (Chain N) K22169 - 1.5.98.3 0.00000000000000000001839 92.0
YYD2_k127_5696120_1 RNA-binding protein contains TRAM domain - - - 0.000000000000000000071 94.0
YYD2_k127_5697162_0 FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000817 418.0
YYD2_k127_5697162_1 Chlorite dismutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 353.0
YYD2_k127_5697162_2 Domain of unknown function (DUF1802) - - - 0.00000000000000000000000000000000000000000005807 168.0
YYD2_k127_5697162_3 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000004274 149.0
YYD2_k127_5697162_4 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000001133 95.0
YYD2_k127_5702599_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002653 265.0
YYD2_k127_5702599_1 - - - - 0.00000000000000000006866 98.0
YYD2_k127_570692_0 argininosuccinate lyase K01755 - 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 456.0
YYD2_k127_570692_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 401.0
YYD2_k127_570692_2 Protein of unknown function (DUF354) K09726 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006047 347.0
YYD2_k127_570692_3 Iron-sulfur cluster assembly protein - - - 0.0000000000000000000000000000000000000000000001281 169.0
YYD2_k127_5713601_0 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs K07573 - - 0.00000000000000000000000000000000000000000000000000000000005421 210.0
YYD2_k127_5713601_1 Domain of unknown function (DUF2024) - - - 0.000000000000000000000000000000000000001028 148.0
YYD2_k127_5713601_3 Belongs to the UPF0147 family K09721 - - 0.000000000000000000000001056 106.0
YYD2_k127_5713601_4 PFAM periplasmic copper-binding - - - 0.0000000000000000000003432 109.0
YYD2_k127_5713601_5 Clostripain family - - - 0.0000000000001315 83.0
YYD2_k127_5739556_0 nucleoside 2-deoxyribosyltransferase - - - 0.000000000000007349 85.0
YYD2_k127_5744439_0 single-stranded DNA-dependent ATPase activity K10742,K15376 GO:0000002,GO:0000003,GO:0000014,GO:0000075,GO:0000076,GO:0000166,GO:0000228,GO:0000278,GO:0000706,GO:0000723,GO:0000729,GO:0000733,GO:0000781,GO:0000784,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006264,GO:0006271,GO:0006273,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007005,GO:0007049,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009295,GO:0009607,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010556,GO:0010557,GO:0010604,GO:0016043,GO:0016070,GO:0016233,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016888,GO:0016890,GO:0016893,GO:0016895,GO:0017076,GO:0017108,GO:0017111,GO:0019219,GO:0019222,GO:0019439,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022414,GO:0022607,GO:0022616,GO:0030554,GO:0031297,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031570,GO:0031860,GO:0031974,GO:0031981,GO:0032042,GO:0032200,GO:0032201,GO:0032392,GO:0032502,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0033260,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0035312,GO:0035639,GO:0035861,GO:0036094,GO:0042592,GO:0042623,GO:0042645,GO:0043137,GO:0043139,GO:0043142,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043504,GO:0043596,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0044806,GO:0045005,GO:0045145,GO:0045740,GO:0045786,GO:0045935,GO:0046483,GO:0046700,GO:0048256,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051276,GO:0051321,GO:0051716,GO:0051726,GO:0060249,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0070035,GO:0071103,GO:0071216,GO:0071495,GO:0071704,GO:0071840,GO:0071932,GO:0072396,GO:0072402,GO:0072423,GO:0072429,GO:0080090,GO:0090304,GO:0090305,GO:0090656,GO:0090734,GO:0090737,GO:0097159,GO:0097367,GO:0098687,GO:0140097,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901576,GO:1902969,GO:1902990,GO:1903046,GO:1903047,GO:1903461,GO:1903469,GO:1990601,GO:2000112 2.10.1.1,2.7.7.75,3.6.4.12 0.00000000003462 74.0
YYD2_k127_574674_0 COG1522 Transcriptional regulators - - - 0.00000000000000000114 87.0
YYD2_k127_574674_1 - - - - 0.00000000000000006511 84.0
YYD2_k127_576619_0 RNA binding K07581 - - 0.0000000000000000005947 91.0
YYD2_k127_5766322_0 Transcriptional regulator - - - 0.00000000000000000000000008406 108.0
YYD2_k127_5775452_0 COG3547 Transposase and inactivated derivatives - - - 0.0000000005149 61.0
YYD2_k127_5775452_2 COG3547 Transposase and inactivated derivatives - - - 0.00002496 49.0
YYD2_k127_5778090_1 COG1522 Transcriptional regulators - - - 0.00000000000000000001477 92.0
YYD2_k127_5780067_0 Histone acetyltransferase K07739 - 2.3.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 447.0
YYD2_k127_5780067_1 phosphohydrolase (DHH superfamily) K07097 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 325.0
YYD2_k127_5780335_0 - - - - 0.0000000004813 70.0
YYD2_k127_5794350_0 Deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005266 508.0
YYD2_k127_5794350_1 Deoxyhypusine synthase K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 424.0
YYD2_k127_5794350_2 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 286.0
YYD2_k127_5794350_3 Domain of unknown function (DUF309) K09763 - - 0.0000000000000000000000000000000000001059 147.0
YYD2_k127_5794621_0 UbiD family decarboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 571.0
YYD2_k127_5794621_2 - - - - 0.00000000000000002816 86.0
YYD2_k127_5797793_0 SMC proteins Flexible Hinge Domain K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008139 310.0
YYD2_k127_5797793_1 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001484 288.0
YYD2_k127_5797793_2 Vinylacetyl-CoA Delta-isomerase K14534 - 4.2.1.120,5.3.3.3 0.0000000000000000000000000006725 114.0
YYD2_k127_5818098_0 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000002847 220.0
YYD2_k127_5818098_1 PFAM Protein kinase domain - - - 0.00000001782 63.0
YYD2_k127_5818523_0 - - - - 0.00000000000000000000000000000000000000000001063 165.0
YYD2_k127_5818523_1 PFAM blue (type 1) copper domain protein - - - 0.00000000000000001046 89.0
YYD2_k127_5820245_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 464.0
YYD2_k127_5820245_1 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000573 405.0
YYD2_k127_5820245_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009694 361.0
YYD2_k127_5820245_3 Peptidyl-tRNA hydrolase PTH2 K04794 - 3.1.1.29 0.000000000000000000000000000000000000003553 149.0
YYD2_k127_5820245_4 Zn-ribbon RNA-binding protein with a function in translation K07580 - - 0.000000000000000000000000000007927 119.0
YYD2_k127_5820245_5 Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA K03232 - - 0.0000000000000000000000001234 110.0
YYD2_k127_5820245_6 - - - - 0.0000000000000000000000001364 109.0
YYD2_k127_5820245_7 - - - - 0.00000000000000000008562 90.0
YYD2_k127_583902_1 - - - - 0.000000000000001145 78.0
YYD2_k127_5863646_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 296.0
YYD2_k127_5886540_0 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000001486 262.0
YYD2_k127_5886540_1 ferredoxin - - - 0.0000000000000000000000000008604 116.0
YYD2_k127_589240_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.000000003 65.0
YYD2_k127_589240_1 heat shock protein binding - - - 0.000001351 52.0
YYD2_k127_5896829_0 Protein of unknown function (DUF521) K09123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 426.0
YYD2_k127_5896829_1 Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6- hydroxymethyl-7,8-dihydropterin diphosphate (6-HMDP) K07142 - 2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 289.0
YYD2_k127_5896829_2 Protein of unknown function DUF126 K09128 - - 0.0000000000000000000000000000000002334 136.0
YYD2_k127_5896829_3 PFAM Like-Sm ribonucleoprotein, core K04796 - - 0.0000000000000106 75.0
YYD2_k127_5902845_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K00836 - 2.6.1.19,2.6.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 453.0
YYD2_k127_5902845_1 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.00000000000000000000000000000000000000000000000000000000000000005122 230.0
YYD2_k127_5902845_2 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000006764 201.0
YYD2_k127_5917967_0 PAC2 family K06869 - - 0.0000000000000000000000000000000000000000000000000000000000000000001722 237.0
YYD2_k127_5917967_1 - - - - 0.000000000000000000000000000002362 123.0
YYD2_k127_5917967_3 Alpha/beta hydrolase family K01561 - 3.8.1.3 0.00009787 45.0
YYD2_k127_5938945_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002988 254.0
YYD2_k127_5938945_1 - - - - 0.0000000000000000000000000000009036 125.0
YYD2_k127_5938945_2 Transcriptional regulator - - - 0.000000000000000000000000000002216 128.0
YYD2_k127_5938945_3 Flavin reductase like domain - - - 0.0000000000000000000006689 102.0
YYD2_k127_5938945_4 cellulose binding - - - 0.000000000000000002443 87.0
YYD2_k127_5938945_5 GYD domain - - - 0.000000000000000003354 86.0
YYD2_k127_5938945_6 Histidine kinase A domain protein - - - 0.00000000004471 68.0
YYD2_k127_5938945_7 Histidine kinase A domain protein - - - 0.0003485 46.0
YYD2_k127_5940567_0 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000007339 171.0
YYD2_k127_5940567_1 - - - - 0.00000000000000001098 91.0
YYD2_k127_5948386_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 2.638e-231 721.0
YYD2_k127_5948386_1 - - - - 0.00000000000000000000000000000001924 128.0
YYD2_k127_5962901_0 Radical SAM K06937 - - 0.0 1094.0
YYD2_k127_5962901_1 Belongs to the enoyl-CoA hydratase isomerase family K01715,K15019 - 4.2.1.116,4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006615 423.0
YYD2_k127_5962901_2 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 334.0
YYD2_k127_5962901_3 Conserved hypothetical ATP binding protein K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 326.0
YYD2_k127_5962901_4 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.0000000001381 62.0
YYD2_k127_5974930_0 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009949 520.0
YYD2_k127_5974930_1 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 0.000000000000000000000000000000000000000001154 166.0
YYD2_k127_5974930_2 Purple acid Phosphatase, N-terminal domain - - - 0.0000000000000000000000001486 120.0
YYD2_k127_5974930_3 - - - - 0.00000000000000005312 83.0
YYD2_k127_5974930_4 Transcriptional regulator - - - 0.000000000000007432 77.0
YYD2_k127_5974930_5 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 0.00000001414 59.0
YYD2_k127_5974930_6 - - - - 0.000007034 51.0
YYD2_k127_5986153_0 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 511.0
YYD2_k127_600186_0 PvdJ PvdD PvdP-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 321.0
YYD2_k127_6003207_0 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006044 389.0
YYD2_k127_6033332_0 COG1335 Amidases related to nicotinamidase K09020 - 3.5.1.110 0.000000000000000000000000000000000000000000000000000000000000000000000000000004873 269.0
YYD2_k127_6033332_1 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000001849 237.0
YYD2_k127_6033332_2 NADPH-dependent FMN reductase K03809 - 1.6.5.2 0.000000000000000000000000000000000000000000000002337 181.0
YYD2_k127_6046701_0 FeS assembly protein SufB K09014 - - 1.966e-279 861.0
YYD2_k127_6046701_1 FeS assembly protein SufD K09014,K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 559.0
YYD2_k127_6046701_10 PFAM regulatory protein, ArsR - - - 0.000000000000000000000000000000000000004397 150.0
YYD2_k127_6046701_11 - - - - 0.0000000000000000000000000000000000004552 147.0
YYD2_k127_6046701_12 of nitrite reductase and ring-hydroxylating K05710 - - 0.00000000000000000000000000000000532 130.0
YYD2_k127_6046701_13 Putative tRNA binding domain K06878 - - 0.0000000000000000000000000000004806 126.0
YYD2_k127_6046701_14 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.000006938 57.0
YYD2_k127_6046701_2 PFAM aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008837 540.0
YYD2_k127_6046701_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006699 453.0
YYD2_k127_6046701_4 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 396.0
YYD2_k127_6046701_5 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 336.0
YYD2_k127_6046701_6 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 318.0
YYD2_k127_6046701_7 Belongs to the precorrin methyltransferase family K02303 - 2.1.1.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 298.0
YYD2_k127_6046701_8 Siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002528 270.0
YYD2_k127_6046701_9 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000007094 258.0
YYD2_k127_6049064_0 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003073 251.0
YYD2_k127_6049812_0 CBS domain - - - 0.0000000000000000000000000000000000000000002381 165.0
YYD2_k127_607198_0 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001311 235.0
YYD2_k127_607198_1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000005532 191.0
YYD2_k127_607198_3 PFAM phospholipase Carboxylesterase K06999 - - 0.00000000001369 66.0
YYD2_k127_607198_4 Dienelactone hydrolase family K06999 - - 0.0000000002613 61.0
YYD2_k127_607198_5 Carboxylesterase K06999 - - 0.000004617 50.0
YYD2_k127_60735_0 Protein of unknown function (DUF1211) - - - 0.00003375 50.0
YYD2_k127_6099255_0 - - - - 0.0000000000000000000000002407 110.0
YYD2_k127_6099255_1 Winged helix-turn-helix - - - 0.00000000000000000000003259 101.0
YYD2_k127_6099255_2 Cupredoxin-like domain - - - 0.0000000000000000001157 89.0
YYD2_k127_6101600_0 Major Facilitator Superfamily - - - 0.000000000000000008292 85.0
YYD2_k127_6101743_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005111 432.0
YYD2_k127_6101743_1 PFAM Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005336 297.0
YYD2_k127_6101743_2 Diphthamide synthase K06927 - 6.3.1.14 0.0000000000000000000000000000000000000000000000000000000000000000001139 237.0
YYD2_k127_6101743_3 Transcriptional regulator - - - 0.000003721 52.0
YYD2_k127_6125438_0 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K05710 - - 0.00000000000000000000000000001141 121.0
YYD2_k127_61461_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 539.0
YYD2_k127_61461_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 363.0
YYD2_k127_6157198_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 3.485e-304 953.0
YYD2_k127_6157345_0 Peptidase C26 K07010 - - 0.000001098 57.0
YYD2_k127_6165869_0 Sulfite reductase K00392 - 1.8.7.1 2.621e-285 887.0
YYD2_k127_6165869_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008842 579.0
YYD2_k127_6165869_10 transcription factor, homolog of eukaryotic MBF1 K03627 - - 0.000000000000000000000000000000000022 140.0
YYD2_k127_6165869_11 H subunit K02107 - - 0.00000000000000001094 87.0
YYD2_k127_6165869_2 tRNA pseudouridine synthase K06176 - 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 443.0
YYD2_k127_6165869_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 412.0
YYD2_k127_6165869_4 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 406.0
YYD2_k127_6165869_5 ATP synthase (C/AC39) subunit K02119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 325.0
YYD2_k127_6165869_6 Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs K07254 - 2.1.1.206 0.00000000000000000000000000000000000000000000000000000000002489 210.0
YYD2_k127_6165869_7 Contacts the emerging nascent chain on the ribosome K03626 - - 0.0000000000000000000000000000000000000000000000000248 181.0
YYD2_k127_6165869_8 Patch-forming domain C2 of tRNA-guanine transglycosylase K07398 - - 0.0000000000000000000000000000000000000000000000003447 180.0
YYD2_k127_6165869_9 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000000000000000282 147.0
YYD2_k127_6169615_0 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 293.0
YYD2_k127_6169615_1 CHRD domain - - - 0.00000000000006696 77.0
YYD2_k127_6169615_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0001392 50.0
YYD2_k127_6169880_0 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002027 268.0
YYD2_k127_6169880_1 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000002787 253.0
YYD2_k127_6179008_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008724 506.0
YYD2_k127_6179008_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 414.0
YYD2_k127_6179008_2 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04797 - - 0.00000000000000000000000000000000000000002153 156.0
YYD2_k127_6179008_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.00000000000000000000000000002418 122.0
YYD2_k127_6181425_0 COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007293 257.0
YYD2_k127_6181425_1 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000002599 255.0
YYD2_k127_6181425_2 PFAM Phosphoribosyltransferase - - - 0.00000000000000000000000000000003901 130.0
YYD2_k127_6181425_3 PFAM GvpD gas vesicle - - - 0.00000000000000000000000000002019 134.0
YYD2_k127_6181425_4 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000009206 126.0
YYD2_k127_6188231_0 - - - - 0.0000008115 52.0
YYD2_k127_6188332_0 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K20989 - - 0.0000000001219 64.0
YYD2_k127_6202245_0 COG0433 Predicted ATPase - - - 0.00000000000000000000000000000000000000000001143 180.0
YYD2_k127_6218205_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 3.4e-307 952.0
YYD2_k127_6218205_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 9.066e-224 705.0
YYD2_k127_6218205_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000002539 246.0
YYD2_k127_6218205_3 NADH ubiquinone oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000002739 211.0
YYD2_k127_6218205_4 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000000000000000001766 169.0
YYD2_k127_6218205_5 Transcriptional regulator - - - 0.000000000000000006347 86.0
YYD2_k127_6218205_6 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into K04799 - - 0.000000000000002603 78.0
YYD2_k127_6218398_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006411 271.0
YYD2_k127_6218398_1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000002083 216.0
YYD2_k127_6221060_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001705 238.0
YYD2_k127_6221060_1 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.00000000000000000000000000000000004583 140.0
YYD2_k127_6232903_0 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000002148 123.0
YYD2_k127_6232903_1 Protein of unknown function (DUF2795) - - - 0.000000000000000000001003 99.0
YYD2_k127_6232903_2 Tellurite resistance protein TehB - - - 0.0005913 44.0
YYD2_k127_6233868_0 PFAM TCP-1 cpn60 chaperonin family K22447 - - 1.296e-275 856.0
YYD2_k127_6233868_1 UbiD family decarboxylase K03182 - 4.1.1.98 8.333e-221 693.0
YYD2_k127_6233868_10 cytochrome-c peroxidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000008462 238.0
YYD2_k127_6233868_11 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000001628 235.0
YYD2_k127_6233868_12 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000002891 207.0
YYD2_k127_6233868_13 thioesterase - - - 0.0000000000000000000000000000000000000000000000000008603 186.0
YYD2_k127_6233868_14 metal-dependent protease of the PAD1 JAB1 superfamily - - - 0.00000000000000000000000000000000000000000000000001184 183.0
YYD2_k127_6233868_15 NUDIX domain - - - 0.000000000000000000000000000000000005652 144.0
YYD2_k127_6233868_16 - - - - 0.000000000000000000000000000000000008244 138.0
YYD2_k127_6233868_17 Tetratricopeptide repeat - - - 0.000000000000000000000000000000004859 140.0
YYD2_k127_6233868_2 inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 545.0
YYD2_k127_6233868_3 NOSIC (NUC001) domain K14564 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 419.0
YYD2_k127_6233868_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family K00555 - 2.1.1.215,2.1.1.216 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 387.0
YYD2_k127_6233868_5 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007207 369.0
YYD2_k127_6233868_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005212 356.0
YYD2_k127_6233868_7 inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859 337.0
YYD2_k127_6233868_8 Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA K04795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 321.0
YYD2_k127_6233868_9 glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000005641 266.0
YYD2_k127_6241848_0 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 605.0
YYD2_k127_6241848_1 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 325.0
YYD2_k127_6241848_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002348 237.0
YYD2_k127_6241848_3 Guanylyl transferase CofC like K14941 - 2.7.7.68 0.0000000000000000000000000000000000000009679 155.0
YYD2_k127_6241848_4 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.000000000005501 69.0
YYD2_k127_6268984_1 - - - - 0.000002034 58.0
YYD2_k127_6274985_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005156 267.0
YYD2_k127_6280309_0 ribosomal protein L3 K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 439.0
YYD2_k127_6280309_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 287.0
YYD2_k127_6280309_2 Ribosomal protein L4 K02930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000477 241.0
YYD2_k127_6280309_3 Putative RNA methyltransferase K09142 - - 0.000000000000000000000000000000000000000000000000000000000000004129 227.0
YYD2_k127_6285558_0 pyrroloquinoline quinone binding - - - 0.0000000001161 71.0
YYD2_k127_6287730_0 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000004064 146.0
YYD2_k127_6287730_2 COG2146 Ferredoxin subunits of nitrite reductase and K00363 - 1.7.1.15 0.000000000000009321 76.0
YYD2_k127_6295060_0 Archaeal Nre, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 422.0
YYD2_k127_6295060_1 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000506 358.0
YYD2_k127_6296585_0 - - - - 0.0000000000000000000000000000000002695 134.0
YYD2_k127_6296585_1 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000001792 124.0
YYD2_k127_6296585_2 Matrix metallopeptidase 19 K07763,K07998 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0004252,GO:0005575,GO:0005576,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008237,GO:0009987,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022411,GO:0022617,GO:0030198,GO:0031012,GO:0043062,GO:0043170,GO:0044238,GO:0044421,GO:0070011,GO:0071704,GO:0071840,GO:0140096,GO:1901564 3.4.24.80 0.0000003475 60.0
YYD2_k127_6300584_0 Calcineurin-like phosphoesterase superfamily domain K03547 - - 0.0000000000000003179 91.0
YYD2_k127_6300584_1 PFAM SMC domain protein K03546 - - 0.000009304 59.0
YYD2_k127_6306354_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00034 - 1.1.1.47 0.000000000000000000000000000000000000000000000000000000009305 207.0
YYD2_k127_6306354_1 - - - - 0.00000000000000000000000000000000000000000002175 168.0
YYD2_k127_6306354_2 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000006062 159.0
YYD2_k127_6308061_0 NADH dehydrogenase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000004572 172.0
YYD2_k127_6318480_0 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000002028 171.0
YYD2_k127_6318480_1 Universal stress protein - - - 0.0002172 51.0
YYD2_k127_6334587_0 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 296.0
YYD2_k127_6334587_1 PFAM regulatory protein TetR K03577,K18939 - - 0.000000000000000000000000000000002514 135.0
YYD2_k127_6343924_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 2.537e-281 882.0
YYD2_k127_6343924_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 6.86e-237 739.0
YYD2_k127_6343924_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 354.0
YYD2_k127_6343924_3 Phosphoglycolate phosphatase K22223 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007196 313.0
YYD2_k127_6343924_4 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 313.0
YYD2_k127_6343924_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 302.0
YYD2_k127_6343924_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000003296 170.0
YYD2_k127_6343924_7 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000008889 100.0
YYD2_k127_6350834_0 Arsenical pump membrane protein - - - 0.0000000000000000000000000000000000000000000001113 171.0
YYD2_k127_6354129_0 - - - - 0.00000001646 58.0
YYD2_k127_6354585_0 Phosphoadenosine phosphosulfate reductase family K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 363.0
YYD2_k127_6354585_1 Catalyzes the conversion of dihydroorotate to orotate K00226,K00254,K17723,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.1,1.3.1.14,1.3.5.2,1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 348.0
YYD2_k127_6354585_2 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 355.0
YYD2_k127_6354585_3 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000993 292.0
YYD2_k127_6354585_4 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001234 282.0
YYD2_k127_6354585_5 UPF0126 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000009885 239.0
YYD2_k127_6354585_6 - - - - 0.00000000000000000000000000000000000000000000006509 172.0
YYD2_k127_6354585_7 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000004943 183.0
YYD2_k127_635822_0 - - - - 0.00000000000000000000000000000000000017 145.0
YYD2_k127_635822_1 antibiotic catabolic process - - - 0.0000000000000000000000000000000000808 138.0
YYD2_k127_635822_2 Transcriptional regulator, TrmB - - - 0.00000000000000000007383 90.0
YYD2_k127_6366382_0 Purple acid Phosphatase, N-terminal domain - - - 0.00000000000000000000000000006102 132.0
YYD2_k127_6367343_0 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 598.0
YYD2_k127_6367343_1 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.0000000000000000000000000000000000000000001383 163.0
YYD2_k127_6367343_2 conserved protein implicated in secretion - - - 0.00000000000000000000000000000000003785 142.0
YYD2_k127_6372337_0 tail specific protease - - - 0.00000000000000000000000003366 119.0
YYD2_k127_6381661_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 7.736e-246 771.0
YYD2_k127_6381661_1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 454.0
YYD2_k127_6381661_2 Cytidylyltransferase-like K00952 - 2.7.7.1 0.000000004847 57.0
YYD2_k127_6388921_0 TIGRFAM ABC transporter, substrate-binding protein, aliphatic sulfonates family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004451 463.0
YYD2_k127_6392902_0 Thiamine biosynthesis protein ThiC K03147 - 4.1.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 318.0
YYD2_k127_6392902_1 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000003352 168.0
YYD2_k127_6394556_0 Nitroreductase family - - - 0.0000000000004189 71.0
YYD2_k127_6400641_0 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 406.0
YYD2_k127_6400641_1 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 376.0
YYD2_k127_6400641_2 Lrp/AsnC ligand binding domain - - - 0.000000000000000000000000000000000000007748 145.0
YYD2_k127_6400641_3 - - - - 0.00000000000000000000002791 107.0
YYD2_k127_6408309_0 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 312.0
YYD2_k127_6408309_1 Queuosine biosynthesis protein QueC K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007807 291.0
YYD2_k127_6417216_0 Glutamine amidotransferase domain - - - 0.000000000000000000000000000000000000000000944 167.0
YYD2_k127_6417216_1 Glutamate synthase central domain K00265 - 1.4.1.13,1.4.1.14 0.0007178 51.0
YYD2_k127_6417692_0 - - - - 0.0000000000000000000000000006318 115.0
YYD2_k127_6417692_1 PFAM phosphoesterase, PA-phosphatase related K19302 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.1.27 0.0000000000000000001167 92.0
YYD2_k127_6421525_0 Shwachman-Bodian-Diamond syndrome (SBDS) protein K14574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005378 279.0
YYD2_k127_6421525_1 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000000000007581 233.0
YYD2_k127_6421525_2 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000003669 222.0
YYD2_k127_6421525_3 Belongs to the eukaryotic ribosomal protein eL18 family K02883 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000004391 89.0
YYD2_k127_6422504_0 PFAM UspA domain protein - - - 0.00001215 55.0
YYD2_k127_6426339_0 DNA polymerase IV (family X) K02347 - - 3.254e-229 724.0
YYD2_k127_6426339_3 Protein of unknown function (DUF421) - - - 0.00000001284 63.0
YYD2_k127_6427373_0 N-terminal domain of oxidoreductase K07119 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 431.0
YYD2_k127_6427373_1 CBS domain - - - 0.0000000000000000001716 96.0
YYD2_k127_6427373_2 response regulator, receiver - - - 0.00000000008395 68.0
YYD2_k127_6427373_3 alginic acid biosynthetic process K09483 - 4.2.1.118 0.000000008541 66.0
YYD2_k127_6428189_0 Class II aldolase adducin family protein K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000001215 181.0
YYD2_k127_6428189_1 PFAM hydrogenase formation HypD protein K04654 - - 0.00000000000000000000000000002161 120.0
YYD2_k127_6428494_0 PFAM TCP-1 cpn60 chaperonin family K22447 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0044183,GO:0051082,GO:0061077 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 424.0
YYD2_k127_6428494_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000003671 208.0
YYD2_k127_6428494_2 transcriptional K07721 - - 0.0000000000000000000000000000000000000000000000000000003604 201.0
YYD2_k127_6428494_3 PFAM TCP-1 cpn60 chaperonin family K22447 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0044183,GO:0051082,GO:0061077 - 0.0000000003595 63.0
YYD2_k127_6430891_0 - - - - 0.000000000000000000000000000000002761 136.0
YYD2_k127_6431873_0 COG1252 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007494 332.0
YYD2_k127_646319_0 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 318.0
YYD2_k127_646897_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 5.319e-215 681.0
YYD2_k127_646897_1 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 420.0
YYD2_k127_646897_2 oxidoreductase FAD NAD(P)-binding K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 370.0
YYD2_k127_646897_3 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 353.0
YYD2_k127_646897_4 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.000000000000000000000000000000000000000000000000000000000000002242 221.0
YYD2_k127_666737_0 NAD-dependent epimerase dehydratase K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 414.0
YYD2_k127_669370_0 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 486.0
YYD2_k127_672808_0 COG1522 Transcriptional regulators - - - 0.000002417 53.0
YYD2_k127_675094_0 Purple acid Phosphatase, N-terminal domain - - - 0.00000000000000000000000000000783 128.0
YYD2_k127_67741_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 302.0
YYD2_k127_67741_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.000001333 49.0
YYD2_k127_685495_0 Belongs to the universal stress protein A family - - - 0.00000000000000000004794 94.0
YYD2_k127_686230_0 PFAM beta-lactamase domain protein K06897 - 2.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000006835 258.0
YYD2_k127_694204_0 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000246 97.0
YYD2_k127_704172_0 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000002171 161.0
YYD2_k127_704172_1 - - - - 0.00000000000004781 77.0
YYD2_k127_704172_2 - - - - 0.000000000001339 76.0
YYD2_k127_707645_0 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 387.0
YYD2_k127_707645_1 Belongs to the SUI1 family K03113 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0002190,GO:0002192,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0110017,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000002536 76.0
YYD2_k127_707849_0 - - - - 0.000000002169 64.0
YYD2_k127_711809_0 PFAM Acetyl-CoA hydrolase transferase - - - 0.000752 48.0
YYD2_k127_726722_0 Hydrolase, alpha beta domain protein K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000001185 218.0
YYD2_k127_726722_1 - - - - 0.000000001412 61.0
YYD2_k127_7334_0 Hemolysin-type calcium-binding - - - 0.0000000000002918 79.0
YYD2_k127_740247_0 Transcriptional regulator - - - 0.0000000000000296 78.0
YYD2_k127_742518_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000002535 219.0
YYD2_k127_747310_0 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 1.37e-233 733.0
YYD2_k127_747310_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000007618 252.0
YYD2_k127_747310_2 Histone acetyltransferase K07739 - 2.3.1.48 0.00000000000000005929 81.0
YYD2_k127_749079_0 factor TFIIB K03124 - - 0.00000000000000000000000000000000000000000000000000000000000000000586 229.0
YYD2_k127_749079_1 Ribosomal protein S8e K02995 - - 0.000000000000000000000000000000000000001575 151.0
YYD2_k127_749079_2 SRP19 protein K03105 - - 0.000000000000000000000000000009136 121.0
YYD2_k127_749079_3 RNA-binding protein involved in rRNA processing K07569 - - 0.0000000000001134 74.0
YYD2_k127_752107_0 PFAM TCP-1 cpn60 chaperonin family K22447 - - 5.641e-199 628.0
YYD2_k127_752107_1 UreF K03188 - - 0.0000000000000000000000000000000000000000000000000000000000288 213.0
YYD2_k127_752107_2 UreE urease accessory protein, N-terminal domain K03187 - - 0.00000000000000000000000000000000000000005057 157.0
YYD2_k127_759904_0 Domain of unknown function (DUF373) K08975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 479.0
YYD2_k127_759904_1 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids K15888 - 2.5.1.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 363.0
YYD2_k127_759904_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 362.0
YYD2_k127_759904_3 - - - - 0.0000000000000000000000000000000000000000007361 160.0
YYD2_k127_759904_4 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000001574 158.0
YYD2_k127_759904_5 NUDIX domain - - - 0.0000000000000000000000000000000000007547 143.0
YYD2_k127_759904_6 - - - - 0.000000000000000000000002083 105.0
YYD2_k127_759904_7 - - - - 0.000000000000000000245 91.0
YYD2_k127_763528_0 Cob(II)yrinic acid a,c-diamide reductase K04719 - 1.13.11.79 0.00000000000000000000000000000000000000000000000000000000000000000000002331 245.0
YYD2_k127_763528_1 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000125 192.0
YYD2_k127_763944_0 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000003067 76.0
YYD2_k127_763944_1 Carbohydrate ABC transporter ATP-binding protein, CUT1 family K10111,K10112 - - 0.00006424 50.0
YYD2_k127_764010_0 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000002307 234.0
YYD2_k127_764010_1 Transcriptional regulator - - - 0.000000000000000004216 87.0
YYD2_k127_768456_0 response regulator, receiver - - - 0.00000000000002302 76.0
YYD2_k127_778280_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 392.0
YYD2_k127_778479_0 Subtilase family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 299.0
YYD2_k127_781102_0 CBS domain K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 544.0
YYD2_k127_781102_1 FHA domain containing protein - - - 0.00000000000000000000000329 112.0
YYD2_k127_781102_2 Dodecin K09165 - - 0.000000000000001359 78.0
YYD2_k127_781102_3 Hemolysin-type calcium-binding repeat (2 copies) - - - 0.0000001488 62.0
YYD2_k127_785278_0 Lysine exporter protein LysE YggA - - - 0.00000000000000000000000000000000000000000002173 169.0
YYD2_k127_785278_1 Periplasmic binding protein K02016 - - 0.0000000000000000000000003091 107.0
YYD2_k127_789975_0 nucleotidyltransferase activity - - - 0.0000000000000000000001728 102.0
YYD2_k127_800778_0 transcriptional - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 302.0
YYD2_k127_800778_1 conserved protein implicated in secretion - - - 0.000000000000000000000000000000000001168 148.0
YYD2_k127_800778_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000007448 61.0
YYD2_k127_808088_0 Histidine kinase - - - 0.00000684 57.0
YYD2_k127_811350_0 High-affinity Fe2 Pb2 permease K07243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 549.0
YYD2_k127_811350_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 295.0
YYD2_k127_811350_2 transcriptional regulators - - - 0.0000000000000001225 83.0
YYD2_k127_817598_0 cytochrome p450 - - - 0.00000000000000000000000000000000224 134.0
YYD2_k127_824177_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 401.0
YYD2_k127_824177_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 282.0
YYD2_k127_824177_2 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000001517 258.0
YYD2_k127_824177_3 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000004352 253.0
YYD2_k127_824177_4 Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits K03236 - - 0.000000000000000000000000000000000000004729 145.0
YYD2_k127_824177_5 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000007751 87.0
YYD2_k127_833411_0 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007473 284.0
YYD2_k127_833411_2 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0000000000000000000000000000000000000000000000000002229 194.0
YYD2_k127_833411_3 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000005258 87.0
YYD2_k127_833411_4 integrase family - - - 0.0000005113 57.0
YYD2_k127_840463_0 PFAM Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 490.0
YYD2_k127_840463_1 divalent heavy-metal cations transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 451.0
YYD2_k127_840463_2 cytochrome p450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005444 394.0
YYD2_k127_840463_3 iron dependent repressor - - - 0.00000000000000000000000000000000000000000000000000000002173 200.0
YYD2_k127_840463_4 oxidation-reduction process K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000007405 166.0
YYD2_k127_840463_5 protein conserved in bacteria - - - 0.00000000000004609 82.0
YYD2_k127_841114_0 - - - - 0.000000000000000000002403 104.0
YYD2_k127_841114_1 high-affinity ferrous iron transmembrane transporter activity K07243 - - 0.000000000007767 74.0
YYD2_k127_846811_0 zinc metalloprotease whose natural substrate is K06974 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000001314 123.0
YYD2_k127_849435_0 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 0.00001888 50.0
YYD2_k127_849435_1 Required for chromosome condensation and partitioning K03529 - - 0.0009263 49.0
YYD2_k127_8511_0 TIGRFAM excinuclease ABC, C subunit K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 381.0
YYD2_k127_861255_0 Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA K03265 - - 2.51e-216 677.0
YYD2_k127_862744_0 Belongs to the LDH MDH superfamily K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 466.0
YYD2_k127_862744_1 AIR carboxylase K06898 - - 0.000000000000000000000002018 108.0
YYD2_k127_864714_0 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006193 285.0
YYD2_k127_864714_1 COG3316 Transposase and inactivated derivatives - - - 0.00001155 52.0
YYD2_k127_871124_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 447.0
YYD2_k127_871124_1 DHHA1 domain K07463 - - 0.00000000002621 68.0
YYD2_k127_872181_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 419.0
YYD2_k127_876472_0 ATP-dependent helicase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003901 319.0
YYD2_k127_878385_0 - - - - 0.0000000000001297 78.0
YYD2_k127_878385_1 cheY-homologous receiver domain - - - 0.00001059 53.0
YYD2_k127_886583_0 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0002911 52.0
YYD2_k127_889276_0 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344 505.0
YYD2_k127_889276_1 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 476.0
YYD2_k127_889276_2 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009918 464.0
YYD2_k127_889276_3 Glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 461.0
YYD2_k127_889276_4 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005843 407.0
YYD2_k127_889276_5 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 301.0
YYD2_k127_889276_6 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000001975 229.0
YYD2_k127_889276_7 Ammonium Transporter K03320 - - 0.0000000000000000000000000000000000000000000002102 171.0
YYD2_k127_903045_0 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000003241 186.0
YYD2_k127_932404_0 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006475 263.0
YYD2_k127_994081_0 - - - - 0.00002534 52.0