GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0030 |
|---|---|
| Name | EH3 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 25.7257 N 100.223 E |
| Altitude (m) | 1992.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 4.3546 |
| TP (g/kg) | 0.9988 |
| TS (g/kg) | 2.1504 |
| TC (g/kg) | 46.4600 |
| Fe (mg/kg) | 58733.7058 |
| Mn (mg/kg) | 1254.1899 |
| C/N | 10.6693 |
| IC (g/kg) | 10.5615 |
| MBC (g/kg) | 0.1636 |
| pH | 7.1400 |
| Water content (%) | 0.8012 |
| NO3- (mg/kg) | -3.9801 |
| NH4+ (mg/kg) | 59.1326 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs47
The MAGs in SMP0030
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG01081 | EH3_bin.10 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 97.82 | 0.88 | 49.0 | 13,615 | 1,730,509 |
| MAG01082 | EH3_bin.12 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__UBA8522;g__;s__ | 88.42 | 3.32 | 54.0 | 10,109 | 2,665,428 |
| MAG01083 | EH3_bin.13 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Thiobacillaceae;g__PFJX01;s__ | 76.33 | 1.74 | 66.0 | 3,630 | 1,975,657 |
| MAG01084 | EH3_bin.14 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__LD21;s__ | 76.01 | 0.15 | 41.0 | 6,778 | 2,169,333 |
| MAG01085 | EH3_bin.15 | d__Bacteria;p__Krumholzibacteriota;c__Krumholzibacteriia;o__Krumholzibacteriales;f__Krumholzibacteriaceae;g__SSS58A;s__ | 96.34 | 2.63 | 66.0 | 11,301 | 2,900,076 |
| MAG01086 | EH3_bin.16 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__UBA1845;f__UBA1845;g__;s__ | 93.94 | 3.49 | 63.0 | 29,575 | 5,533,859 |
| MAG01087 | EH3_bin.17 | d__Bacteria;p__Acidobacteriota;c__Polarisedimenticolia;o__Polarisedimenticolales;f__DASRJG01;g__;s__ | 95.06 | 2.27 | 70.0 | 13,455 | 2,932,731 |
| MAG01088 | EH3_bin.20 | d__Archaea;p__Thermoplasmatota;c__E2;o__DHVEG-1;f__DHVEG-1;g__JAGMDE01;s__ | 94.37 | 4.46 | 32.0 | 6,002 | 1,888,484 |
| MAG01089 | EH3_bin.21 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__;g__;s__ | 100.0 | 0.0 | 60.0 | 39,383 | 3,140,954 |
| MAG01090 | EH3_bin.24 | d__Bacteria;p__Desulfobacterota_C;c__Deferrisomatia;o__Deferrisomatales;f__JACRMM01;g__JACRMM01;s__ | 71.56 | 0.32 | 68.0 | 8,826 | 2,219,881 |
| MAG01091 | EH3_bin.25 | d__Archaea;p__Methanobacteriota_B;c__Thermococci;o__Methanofastidiosales;f__;g__;s__ | 64.68 | 0.89 | 57.0 | 2,062 | 1,116,309 |
| MAG01092 | EH3_bin.26 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Azotimanducaceae;g__UBA7803;s__ | 84.19 | 0.94 | 68.0 | 28,142 | 3,414,160 |
| MAG01093 | EH3_bin.27 | d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__DSM-12255;g__Geoanaerobacter;s__ | 61.22 | 0.54 | 53.0 | 5,809 | 1,749,547 |
| MAG01094 | EH3_bin.28 | d__Archaea;p__Altiarchaeota;c__Altiarchaeia;o__JAFGQM01;f__JAFGQM01;g__JBFYKJ01;s__ | 86.44 | 0.04 | 53.0 | 19,744 | 1,204,605 |
| MAG01095 | EH3_bin.3 | d__Bacteria;p__Desulfobacterota;c__Syntrophobacteria;o__Syntrophobacterales;f__;g__;s__ | 95.58 | 2.44 | 56.0 | 12,891 | 3,432,108 |
| MAG01096 | EH3_bin.30 | d__Bacteria;p__Actinomycetota;c__UBA4738;o__UBA4738;f__HRBIN12;g__HRBIN12;s__ | 64.23 | 0.58 | 71.0 | 7,918 | 1,603,637 |
| MAG01097 | EH3_bin.31 | d__Bacteria;p__Myxococcota_A;c__UBA9160;o__UBA9160;f__SMWR01;g__;s__ | 64.68 | 1.42 | 73.0 | 8,312 | 3,420,393 |
| MAG01098 | EH3_bin.32 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Gygaellales;f__Profunditerraquicolaceae;g__JAPLLR01;s__ | 78.05 | 4.76 | 52.0 | 7,252 | 1,153,361 |
| MAG01099 | EH3_bin.33 | d__Archaea;p__Thermoplasmatota;c__EX4484-6;o__EX4484-6;f__EX4484-6;g__JALOTP01;s__ | 86.15 | 1.67 | 54.0 | 7,831 | 2,133,053 |
| MAG01100 | EH3_bin.37 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanospirillaceae;g__UBA9949;s__ | 53.23 | 0.12 | 55.0 | 5,770 | 730,771 |
| MAG01101 | EH3_bin.4 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__DASPRG01;s__ | 93.28 | 1.63 | 42.0 | 9,072 | 1,488,789 |
| MAG01102 | EH3_bin.42 | d__Bacteria;p__WOR-3;c__WOR-3;o__SM23-42;f__DASVHD01;g__;s__ | 65.32 | 0.71 | 58.0 | 4,839 | 1,997,686 |
| MAG01103 | EH3_bin.43 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__;s__ | 89.41 | 0.65 | 62.0 | 11,549 | 1,780,039 |
| MAG01104 | EH3_bin.45 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__Methanomassiliicoccales;f__UBA472;g__JAJRAN01;s__ | 70.42 | 1.99 | 58.0 | 4,429 | 1,303,904 |
| MAG01105 | EH3_bin.46 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__JAJYIS01;s__ | 83.25 | 1.68 | 58.0 | 6,998 | 1,553,990 |
| MAG01106 | EH3_bin.48 | d__Bacteria;p__Desulfobacterota;c__Syntrophobacteria;o__BM002;f__BM002;g__JAGFXI01;s__ | 89.42 | 1.7 | 61.0 | 9,850 | 2,678,887 |
| MAG01107 | EH3_bin.51 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Thermoanaerobaculales;f__Thermoanaerobaculaceae;g__;s__ | 95.4 | 2.09 | 72.0 | 13,171 | 2,983,727 |
| MAG01108 | EH3_bin.54 | d__Archaea;p__Asgardarchaeota;c__Thorarchaeia;o__Thorarchaeales;f__Thorarchaeaceae;g__JAWAQK01;s__ | 91.95 | 5.54 | 53.0 | 9,141 | 2,962,119 |
| MAG01109 | EH3_bin.6 | d__Bacteria;p__Patescibacteriota;c__Patescibacteriia;o__SG8-24;f__SG8-24;g__JBAYFM01;s__ | 79.62 | 0.25 | 62.0 | 3,519 | 887,678 |
| MAG01110 | EH3_bin.60 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__Bathyarchaeales;f__SOJC01;g__GCA-020352645;s__ | 89.2 | 1.77 | 50.0 | 15,999 | 1,368,786 |
| MAG01111 | EH3_bin.61 | d__Bacteria;p__Desulfobacterota;c__Desulfomonilia;o__UBA1062;f__UBA1062;g__MWEI01;s__MWEI01 sp025454155 | 87.89 | 6.01 | 59.0 | 6,565 | 2,557,023 |
| MAG01112 | EH3_bin.63 | d__Bacteria;p__Omnitrophota;c__Koll11;o__2-01-FULL-45-10;f__2-01-FULL-45-10;g__JAGVGJ01;s__ | 80.17 | 2.18 | 50.0 | 5,761 | 979,292 |
| MAG01113 | EH3_bin.66 | d__Bacteria;p__Desulfobacterota;c__SM23-61;o__SM23-61;f__SM23-61;g__SM23-61;s__ | 69.99 | 2.04 | 56.0 | 4,731 | 3,454,062 |
| MAG01114 | EH3_bin.67 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__JALHSV01 sp022865525 | 70.83 | 2.1 | 46.0 | 4,295 | 1,007,839 |
| MAG01115 | EH3_bin.68 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JADJWR01;s__ | 69.62 | 2.9 | 69.0 | 6,166 | 2,112,276 |
| MAG01116 | EH3_bin.69 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Rubrivivax;s__ | 93.96 | 4.16 | 71.0 | 44,902 | 4,647,324 |
| MAG01117 | EH3_bin.70 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__UBA4085;g__JAPKZH01;s__ | 91.06 | 3.15 | 56.0 | 21,590 | 4,663,601 |
| MAG01118 | EH3_bin.71 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira_D;s__Nitrospira_D sp030444405 | 77.8 | 0.66 | 56.0 | 11,906 | 2,525,159 |
| MAG01119 | EH3_bin.72 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__SZUA-242;f__SZUA-242;g__SZUA-242;s__ | 91.84 | 3.7 | 61.0 | 16,198 | 3,076,431 |
| MAG01120 | EH3_bin.76 | d__Bacteria;p__WOR-3;c__WOR-3;o__UBA2258;f__UBA2258;g__UBA2258;s__ | 70.27 | 3.22 | 62.0 | 5,824 | 2,519,099 |
| MAG01121 | EH3_bin.77 | d__Bacteria;p__Edwardsbacteria;c__;o__;f__;g__;s__ | 67.15 | 0.9 | 62.0 | 5,592 | 1,926,900 |
| MAG01122 | EH3_bin.79 | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Fen-1087;g__JAPLJM01;s__ | 88.48 | 4.87 | 54.0 | 13,976 | 2,167,444 |
| MAG01123 | EH3_bin.82 | d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__DP-6;f__DP-6;g__;s__ | 87.48 | 1.26 | 73.0 | 7,292 | 2,926,485 |
| MAG01124 | EH3_bin.84 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAEUPI01;s__ | 69.45 | 0.87 | 70.0 | 12,488 | 2,292,857 |
| MAG01125 | EH3_bin.86 | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__UBA2185;g__UBA2185;s__ | 84.1 | 5.73 | 47.0 | 6,566 | 1,597,095 |
| MAG01126 | EH3_bin.89 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira_D;s__ | 90.4 | 1.88 | 59.0 | 14,013 | 2,864,818 |
| MAG01127 | EH3_bin.91 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__JACTUA01;g__JAJRCM01;s__ | 75.31 | 0.42 | 53.0 | 18,501 | 1,050,714 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |