GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0059 |
|---|---|
| Name | MMD2 |
| Type | paddy |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 21.557778 N 111.021111 E |
| Altitude (m) | 15.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2022-10-27 |
| Physicochemical properties | |
| TN (g/kg) | 2.0410 |
| TP (g/kg) | 0.5930 |
| TS (g/kg) | 0.4435 |
| TC (g/kg) | 26.3300 |
| Fe (mg/kg) | 31780.6216 |
| Mn (mg/kg) | 359.2322 |
| C/N | 12.9008 |
| IC (g/kg) | 3.5804 |
| MBC (g/kg) | 0.2131 |
| pH | 4.9800 |
| Water content (%) | 0.5413 |
| NO3- (mg/kg) | -10.7028 |
| NH4+ (mg/kg) | 12.6206 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs24
The MAGs in SMP0059
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG02354 | MMD2_bin.10 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__JAOUFA01;s__ | 83.43 | 0.61 | 68.0 | 11,400 | 2,623,868 |
| MAG02355 | MMD2_bin.14 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Acidiferrobacterales;f__Sulfurifustaceae;g__Sulfuricaulis;s__ | 52.82 | 0.29 | 62.0 | 27,076 | 1,447,451 |
| MAG02356 | MMD2_bin.16 | d__Bacteria;p__Krumholzibacteriota;c__Krumholzibacteriia;o__Krumholzibacteriales;f__Krumholzibacteriaceae;g__SSS58A;s__ | 91.98 | 1.16 | 66.0 | 7,823 | 2,901,517 |
| MAG02357 | MMD2_bin.18 | d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Anaeromyxobacteraceae;g__JACRMN01;s__ | 69.93 | 3.57 | 73.0 | 7,373 | 2,695,599 |
| MAG02358 | MMD2_bin.19 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA9159;g__;s__ | 90.2 | 6.48 | 54.0 | 5,700 | 2,319,387 |
| MAG02359 | MMD2_bin.2 | d__Bacteria;p__WOR-3;c__WOR-3;o__SM23-42;f__DASVHD01;g__;s__ | 90.93 | 0.5 | 60.0 | 31,268 | 2,795,060 |
| MAG02360 | MMD2_bin.20 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Rariloculales;f__Rariloculaceae;g__FEN-1219;s__ | 96.41 | 3.72 | 67.0 | 34,044 | 4,170,472 |
| MAG02361 | MMD2_bin.21 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__40CM-2-53-6;f__RBG-13-38-9;g__JAPKYM01;s__ | 84.58 | 1.6 | 48.0 | 6,582 | 1,054,685 |
| MAG02362 | MMD2_bin.25 | d__Bacteria;p__Patescibacteriota;c__Patescibacteriia;o__2-12-FULL-60-25;f__2-12-FULL-60-25;g__JAHJRN01;s__ | 79.35 | 3.11 | 64.0 | 4,587 | 786,452 |
| MAG02363 | MMD2_bin.26 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__UBA11986;s__ | 66.05 | 0.97 | 57.0 | 4,929 | 2,553,774 |
| MAG02364 | MMD2_bin.28 | d__Archaea;p__Micrarchaeota;c__Micrarchaeia;o__Anstonellales;f__Bilamarchaeaceae;g__CAILMQ01;s__ | 84.67 | 1.45 | 57.0 | 10,517 | 1,153,237 |
| MAG02365 | MMD2_bin.3 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__RBG-13-53-26;f__RBG-13-53-26;g__JAFGCL01;s__ | 78.14 | 4.06 | 58.0 | 8,796 | 2,200,450 |
| MAG02366 | MMD2_bin.31 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__JACTUA01;g__JAJRCL01;s__ | 78.85 | 2.24 | 59.0 | 5,838 | 1,695,411 |
| MAG02367 | MMD2_bin.32 | d__Bacteria;p__Eisenbacteria;c__RBG-16-71-46;o__JAFGJU01;f__JAFGJU01;g__JAFGJU01;s__ | 88.76 | 2.03 | 61.0 | 22,871 | 2,443,062 |
| MAG02368 | MMD2_bin.34 | d__Archaea;p__Micrarchaeota;c__Micrarchaeia;o__Anstonellales;f__Bilamarchaeaceae;g__Bilamarchaeum;s__ | 85.03 | 1.2 | 56.0 | 6,774 | 1,270,075 |
| MAG02369 | MMD2_bin.35 | d__Archaea;p__Thermoplasmatota;c__DTKX01;o__DTKX01;f__GCA-020343715;g__;s__ | 73.05 | 0.86 | 69.0 | 4,244 | 2,470,394 |
| MAG02370 | MMD2_bin.36 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__RBG-16-64-43;g__RBG-16-64-43;s__ | 80.69 | 1.05 | 66.0 | 10,929 | 1,763,563 |
| MAG02371 | MMD2_bin.38 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__Bathyarchaeales;f__Bathycorpusculaceae;g__DASPPK01;s__ | 74.56 | 1.53 | 46.0 | 15,965 | 946,720 |
| MAG02372 | MMD2_bin.4 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA6898;g__UBA6898;s__ | 77.58 | 2.11 | 54.0 | 7,077 | 1,981,092 |
| MAG02373 | MMD2_bin.41 | d__Bacteria;p__Nitrospirota;c__UBA9217;o__UBA9217;f__UBA9217;g__;s__ | 87.93 | 1.17 | 62.0 | 17,032 | 2,953,211 |
| MAG02374 | MMD2_bin.42 | d__Bacteria;p__Patescibacteriota;c__Patescibacteriia;o__GCA-002772895;f__GCA-002772895;g__;s__ | 73.96 | 1.96 | 44.0 | 4,686 | 749,658 |
| MAG02375 | MMD2_bin.6 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__JACTUA01;g__JACTUA01;s__ | 87.8 | 0.59 | 65.0 | 9,589 | 1,543,160 |
| MAG02376 | MMD2_bin.8 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Bryobacterales;f__Bryobacteraceae;g__VFZS01;s__ | 73.62 | 2.49 | 67.0 | 8,670 | 3,871,301 |
| MAG02377 | MMD2_bin.9 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__Minisyncoccales;f__JAHCRE01;g__;s__ | 97.72 | 1.27 | 35.0 | 5,521 | 670,685 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |