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Overview

ID SMP0060
Name MMD3
Type paddy
Habitat soil
Country China
Latitude and longitude 21.557778 N 111.021111 E
Altitude (m) 15.0
Instrument illumina NovaSeq X Plus
AvgSpotLen (bp) 300
LibraryLayout PAIRED
Project PRJNA1430164
Collection Date 2022-10-27
Physicochemical properties
TN (g/kg) 1.3214
TP (g/kg) 0.4771
TS (g/kg) 0.3951
TC (g/kg) 15.5200
Fe (mg/kg) 25592.4370
Mn (mg/kg) 381.3025
C/N 11.7447
IC (g/kg) 0.6721
MBC (g/kg) 0.2016
pH 5.0400
Water content (%) 0.2590
NO3- (mg/kg) 5.1420
NH4+ (mg/kg) 7.7478

Location

Community profile
The microbial community profiled by MetaPhlAn4

MAGs20
The MAGs in SMP0060

ID Name Taxonomy Completeness Contamination GCN50Size
MAG02378 MMD3_bin.1 d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__RBG-16-68-12;f__RBG-16-68-12;g__RBG-16-68-12;s__ 93.65 1.76 67.0 29,551 2,435,277
MAG02379 MMD3_bin.10 d__Bacteria;p__Nitrospirota;c__UBA9217;o__UBA9217;f__UBA9217;g__JAJYKN01;s__ 70.7 0.94 54.0 42,692 2,565,131
MAG02380 MMD3_bin.11 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAKOQB01;s__ 63.17 0.97 67.0 14,858 2,524,498
MAG02381 MMD3_bin.13 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__DAHVFK01;s__ 95.61 3.02 68.0 17,739 3,262,759
MAG02382 MMD3_bin.14 d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Terriglobales;f__Gp1-AA117;g__Angelobacter;s__ 69.01 2.95 60.0 3,308 2,831,334
MAG02383 MMD3_bin.15 d__Bacteria;p__Desulfobacterota;c__SM23-61;o__SM23-61;f__SM23-61;g__SM23-61;s__ 75.34 2.84 58.0 4,591 2,891,737
MAG02384 MMD3_bin.17 d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__DASTHG01;s__ 79.42 1.8 69.0 26,649 3,403,095
MAG02385 MMD3_bin.2 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__VBCG01;s__ 58.68 0.5 70.0 5,295 1,904,183
MAG02386 MMD3_bin.20 d__Bacteria;p__Acidobacteriota;c__UBA6911;o__UBA6911;f__UBA6911;g__JAFNAG01;s__ 96.69 6.39 58.0 55,719 7,442,063
MAG02387 MMD3_bin.22 d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__UBA8522;g__;s__ 77.3 3.65 62.0 13,392 3,309,546
MAG02388 MMD3_bin.27 d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Limisphaerales;f__UBA3939;g__UBA3939;s__ 67.8 0.01 62.0 9,712 3,389,626
MAG02389 MMD3_bin.28 d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__JACORV01;g__JADGQW01;s__ 66.8 0.86 74.0 7,727 2,298,755
MAG02390 MMD3_bin.29 d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__JAHECP01;g__;s__ 72.87 0.25 69.0 20,739 3,320,269
MAG02391 MMD3_bin.30 d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA6898;g__Sulfobium;s__ 87.65 3.41 54.0 10,095 2,561,143
MAG02392 MMD3_bin.31 d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__CSP1-6;g__CAMLFJ01;s__ 62.89 1.26 72.0 11,018 3,595,143
MAG02393 MMD3_bin.32 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__DAHVFK01;s__DAHVFK01 sp035310985 100.0 7.44 68.0 28,068 3,654,260
MAG02394 MMD3_bin.4 d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Fen-1058;f__Fen-1058;g__JBGLNJ01;s__ 95.39 6.59 59.0 29,753 5,969,508
MAG02395 MMD3_bin.5 d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__Fen-1273;s__ 92.77 0.04 64.0 13,738 3,186,979
MAG02396 MMD3_bin.7 d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Terriglobales;f__JAICWP01;g__JAICWP01;s__JAICWP01 sp036375915 94.76 0.18 61.0 19,301 4,972,808
MAG02397 MMD3_bin.8 d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__COMBO-56-21;s__ 91.26 1.09 58.0 23,003 1,966,829
ID Name Taxonomy Completeness Contamination GCN50Size