GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0075 |
|---|---|
| Name | PYH3 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 29.147778 N 116.6725 E |
| Altitude (m) | 19.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 1.9777 |
| TP (g/kg) | 0.6801 |
| TS (g/kg) | 0.2030 |
| TC (g/kg) | 15.7200 |
| Fe (mg/kg) | 35940.4990 |
| Mn (mg/kg) | 891.5547 |
| C/N | 7.9485 |
| IC (g/kg) | 1.4450 |
| MBC (g/kg) | 2.3378 |
| pH | 5.7800 |
| Water content (%) | 0.6853 |
| NO3- (mg/kg) | -9.2848 |
| NH4+ (mg/kg) | 29.3751 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs44
The MAGs in SMP0075
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG03211 | PYH3_bin.1 | d__Bacteria;p__Acidobacteriota;c__UBA6911;o__UBA6911;f__UBA6911;g__;s__ | 85.78 | 0.14 | 62.0 | 24,026 | 3,707,887 |
| MAG03212 | PYH3_bin.10 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__UBA5066;g__DAOMFB01;s__ | 77.2 | 1.16 | 69.0 | 9,072 | 3,069,929 |
| MAG03213 | PYH3_bin.14 | d__Bacteria;p__Desulfobacterota;c__Syntrophobacteria;o__BM002;f__BM002;g__JAGFXI01;s__ | 81.59 | 4.22 | 61.0 | 4,847 | 2,458,680 |
| MAG03214 | PYH3_bin.16 | d__Bacteria;p__BMS3Abin14;c__BMS3Abin14;o__BMS3Abin14;f__;g__;s__ | 99.94 | 2.11 | 66.0 | 16,128 | 2,193,304 |
| MAG03215 | PYH3_bin.17 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__Dissulfurispiraceae;g__;s__ | 85.41 | 3.9 | 54.0 | 5,470 | 2,356,412 |
| MAG03216 | PYH3_bin.2 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Sulfuricellaceae;g__Sulfuricella;s__ | 75.82 | 0.72 | 57.0 | 8,981 | 2,221,931 |
| MAG03217 | PYH3_bin.21 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Palsa-1315;s__ | 60.33 | 1.08 | 57.0 | 6,640 | 1,508,615 |
| MAG03218 | PYH3_bin.22 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__40CM-2-53-6;f__40CM-2-53-6;g__;s__ | 82.3 | 1.36 | 53.0 | 13,243 | 1,836,494 |
| MAG03219 | PYH3_bin.23 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__UBA6910;g__UBA6910;s__ | 60.41 | 0.01 | 70.0 | 4,090 | 1,893,815 |
| MAG03220 | PYH3_bin.25 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__JAUWGG01;f__;g__;s__ | 93.13 | 1.81 | 60.0 | 12,063 | 1,715,347 |
| MAG03221 | PYH3_bin.26 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Terriglobales;f__DASYVL01;g__DASYVL01;s__ | 70.73 | 1.19 | 66.0 | 13,349 | 1,809,374 |
| MAG03222 | PYH3_bin.27 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAKOQB01;s__ | 98.14 | 2.96 | 64.0 | 19,166 | 4,392,192 |
| MAG03223 | PYH3_bin.28 | d__Bacteria;p__BMS3Abin14;c__BMS3Abin14;o__BMS3Abin14;f__;g__;s__ | 66.83 | 2.99 | 65.0 | 5,507 | 1,802,920 |
| MAG03224 | PYH3_bin.29 | d__Archaea;p__Asgardarchaeota;c__Hermodarchaeia;o__Hermodarchaeales;f__Hermodarchaeaceae;g__;s__ | 75.17 | 3.41 | 58.0 | 6,033 | 1,483,789 |
| MAG03225 | PYH3_bin.3 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanospirillaceae;g__Methanoregula;s__ | 51.51 | 0.0 | 48.0 | 5,354 | 865,862 |
| MAG03226 | PYH3_bin.30 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__Dehalococcoidales;f__JAFGLR01;g__JAFGLR01;s__ | 79.55 | 2.71 | 50.0 | 4,127 | 1,557,605 |
| MAG03227 | PYH3_bin.32 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__2-02-FULL-66-14;s__ | 88.3 | 5.84 | 68.0 | 8,482 | 3,107,891 |
| MAG03228 | PYH3_bin.35 | d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfuricurvum;s__ | 65.21 | 2.52 | 45.0 | 8,138 | 1,362,554 |
| MAG03229 | PYH3_bin.36 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__Dehalococcoidales;f__Fen-1064;g__JAURWL01;s__ | 91.38 | 3.97 | 52.0 | 12,620 | 1,994,365 |
| MAG03230 | PYH3_bin.37 | d__Bacteria;p__Nitrospirota;c__UBA9217;o__UBA9217;f__UBA9217;g__JAAXXJ01;s__ | 60.26 | 1.37 | 60.0 | 5,027 | 1,427,505 |
| MAG03231 | PYH3_bin.39 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__2-02-FULL-62-14;s__ | 85.32 | 0.26 | 63.0 | 21,174 | 2,131,972 |
| MAG03232 | PYH3_bin.4 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__;s__ | 65.44 | 1.98 | 54.0 | 22,861 | 1,963,987 |
| MAG03233 | PYH3_bin.40 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__G020354665;s__ | 90.2 | 3.61 | 67.0 | 11,925 | 4,479,992 |
| MAG03234 | PYH3_bin.41 | d__Archaea;p__Thermoplasmatota;c__DTKX01;o__DTKX01;f__GCA-020343715;g__;s__ | 68.79 | 1.11 | 68.0 | 3,822 | 2,487,054 |
| MAG03235 | PYH3_bin.42 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Azotimanducaceae;g__DATJGR01;s__ | 63.85 | 0.96 | 66.0 | 4,711 | 2,179,881 |
| MAG03236 | PYH3_bin.43 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__RBG-16-68-12;f__RBG-16-68-12;g__EA-19;s__ | 79.51 | 0.65 | 68.0 | 5,100 | 1,425,796 |
| MAG03237 | PYH3_bin.45 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Fen-1058;f__Fen-1058;g__;s__ | 97.47 | 3.24 | 64.0 | 15,697 | 3,722,814 |
| MAG03238 | PYH3_bin.46 | d__Bacteria;p__WOR-3;c__WOR-3;o__SM23-42;f__;g__;s__ | 88.42 | 3.32 | 57.0 | 5,821 | 1,989,491 |
| MAG03239 | PYH3_bin.48 | d__Bacteria;p__Desulfobacterota;c__WTBG01;o__WTBG01;f__WTBG01;g__CALJBY01;s__ | 95.43 | 3.66 | 53.0 | 8,151 | 3,190,813 |
| MAG03240 | PYH3_bin.49 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Methylomirabilales;f__2-02-FULL-66-22;g__2-02-FULL-66-22;s__ | 63.66 | 0.51 | 65.0 | 7,369 | 2,685,772 |
| MAG03241 | PYH3_bin.50 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__DASPRG01;s__ | 64.48 | 2.47 | 42.0 | 5,153 | 1,177,754 |
| MAG03242 | PYH3_bin.51 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA6898;g__;s__ | 84.59 | 0.07 | 59.0 | 8,416 | 1,972,020 |
| MAG03243 | PYH3_bin.52 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30;s__ | 73.66 | 2.12 | 66.0 | 6,811 | 1,816,329 |
| MAG03244 | PYH3_bin.54 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAKOQB01;s__ | 100.0 | 0.5 | 65.0 | 16,635 | 4,190,291 |
| MAG03245 | PYH3_bin.55 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Thermoanaerobaculales;f__Thermoanaerobaculaceae;g__RBG-13-68-16;s__ | 77.18 | 1.28 | 68.0 | 5,168 | 2,384,913 |
| MAG03246 | PYH3_bin.56 | d__Bacteria;p__Bacteroidota_A;c__Ignavibacteria;o__SJA-28;f__OLB5;g__;s__ | 85.51 | 0.84 | 46.0 | 6,039 | 2,155,312 |
| MAG03247 | PYH3_bin.57 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__UBA4142;f__UBA4142;g__;s__ | 87.59 | 2.87 | 56.0 | 18,248 | 4,298,979 |
| MAG03248 | PYH3_bin.6 | d__Bacteria;p__Acidobacteriota;c__UBA6911;o__UBA6911;f__UBA6911;g__;s__ | 90.62 | 5.06 | 55.0 | 10,233 | 6,368,975 |
| MAG03249 | PYH3_bin.60 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__CSP1-6;g__AR37;s__ | 78.13 | 2.65 | 68.0 | 11,280 | 3,102,157 |
| MAG03250 | PYH3_bin.61 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__40CM-2-53-6;f__RBG-13-38-9;g__JAPKYM01;s__ | 92.5 | 2.07 | 47.0 | 18,323 | 1,565,062 |
| MAG03251 | PYH3_bin.65 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanospirillaceae;g__UBA9949;s__ | 96.93 | 0.04 | 55.0 | 39,314 | 1,543,036 |
| MAG03252 | PYH3_bin.66 | d__Bacteria;p__JAUVQV01;c__JAUVQV01;o__;f__;g__;s__ | 88.29 | 1.67 | 65.0 | 13,966 | 2,245,168 |
| MAG03253 | PYH3_bin.67 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Fen-1058;f__Fen-1058;g__JBGQGR01;s__ | 87.89 | 3.32 | 54.0 | 8,414 | 3,434,278 |
| MAG03254 | PYH3_bin.9 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__UBA7656;f__UBA7656;g__JADGNW01;s__ | 100.0 | 3.17 | 58.0 | 35,266 | 6,643,120 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |