GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0101 |
|---|---|
| Name | TH2 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 31.3307 N 120.1704 E |
| Altitude (m) | 12.2 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2025-04-09 |
| Physicochemical properties | |
| TN (g/kg) | 1.6029 |
| TP (g/kg) | 0.5297 |
| TS (g/kg) | 0.2838 |
| TC (g/kg) | 12.0700 |
| Fe (mg/kg) | 23378.8820 |
| Mn (mg/kg) | 406.8323 |
| C/N | 7.5300 |
| IC (g/kg) | 1.7235 |
| MBC (g/kg) | 1.5667 |
| pH | 7.6600 |
| Water content (%) | 0.5318 |
| NO3- (mg/kg) | 3.1674 |
| NH4+ (mg/kg) | 37.9579 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs39
The MAGs in SMP0101
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG03892 | TH2_bin.1 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Palsa-948;f__Palsa-948;g__Palsa-948;s__ | 97.01 | 0.01 | 42.0 | 32,636 | 2,530,318 |
| MAG03893 | TH2_bin.10 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__SZUA-242;f__SZUA-242;g__SZUA-242;s__ | 84.82 | 4.48 | 61.0 | 6,852 | 2,299,295 |
| MAG03894 | TH2_bin.12 | d__Bacteria;p__Desulfobacterota;c__BSN033;o__BSN033;f__UBA1163;g__UBA1163;s__ | 97.03 | 6.77 | 46.0 | 23,318 | 4,704,387 |
| MAG03895 | TH2_bin.13 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__;s__ | 67.15 | 3.01 | 53.0 | 4,468 | 2,507,214 |
| MAG03896 | TH2_bin.14 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA6898;g__UBA6898;s__ | 78.66 | 2.72 | 49.0 | 10,423 | 1,657,483 |
| MAG03897 | TH2_bin.17 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__JASBTZ01;s__ | 81.65 | 2.89 | 44.0 | 4,480 | 2,250,311 |
| MAG03898 | TH2_bin.18 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30;s__ | 63.44 | 2.02 | 67.0 | 3,615 | 1,786,220 |
| MAG03899 | TH2_bin.19 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__;g__;s__ | 78.52 | 0.01 | 60.0 | 16,102 | 1,784,600 |
| MAG03900 | TH2_bin.23 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__2-12-FULL-35-15;f__2-12-FULL-35-15;g__2-12-FULL-35-15;s__ | 90.99 | 1.59 | 37.0 | 14,090 | 2,873,561 |
| MAG03901 | TH2_bin.26 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__;s__ | 96.87 | 0.43 | 59.0 | 25,565 | 3,055,490 |
| MAG03902 | TH2_bin.27 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Sedimentisphaerales;f__Anaerohalosphaeraceae;g__UBA7708;s__ | 71.4 | 0.88 | 49.0 | 8,177 | 1,890,676 |
| MAG03903 | TH2_bin.29 | d__Bacteria;p__Desulfobacterota;c__WTBG01;o__WTBG01;f__WTBG01;g__CALJBY01;s__ | 71.11 | 2.4 | 51.0 | 7,911 | 2,361,877 |
| MAG03904 | TH2_bin.30 | d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Myxococcaceae;g__;s__ | 69.54 | 1.07 | 71.0 | 4,000 | 3,397,040 |
| MAG03905 | TH2_bin.33 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Methylococcales;f__Methylomonadaceae;g__;s__ | 80.84 | 2.33 | 53.0 | 6,039 | 2,138,078 |
| MAG03906 | TH2_bin.34 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA6898;g__UBA6898;s__ | 76.29 | 3.8 | 53.0 | 11,648 | 1,784,974 |
| MAG03907 | TH2_bin.36 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Defluviilinea;s__ | 92.27 | 7.44 | 54.0 | 67,665 | 4,325,889 |
| MAG03908 | TH2_bin.38 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA6898;g__UBA6898;s__ | 92.75 | 5.5 | 49.0 | 13,758 | 2,150,745 |
| MAG03909 | TH2_bin.4 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Palsa-1439;f__;g__;s__ | 93.92 | 1.34 | 61.0 | 16,934 | 3,439,326 |
| MAG03910 | TH2_bin.40 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__SZUA-229;f__SZUA-229;g__JACPVK01;s__ | 87.61 | 1.01 | 51.0 | 9,744 | 2,291,454 |
| MAG03911 | TH2_bin.41 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Palsa-948;f__Palsa-948;g__Palsa-948;s__ | 94.51 | 1.26 | 44.0 | 15,199 | 2,473,610 |
| MAG03912 | TH2_bin.42 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__B-17B0;f__B-17BO;g__Aurantibacillus;s__ | 61.43 | 0.84 | 35.0 | 3,467 | 2,228,890 |
| MAG03913 | TH2_bin.47 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__UBA9653;s__ | 72.67 | 0.33 | 65.0 | 3,625 | 1,228,791 |
| MAG03914 | TH2_bin.50 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__;s__ | 83.05 | 1.92 | 67.0 | 10,299 | 2,709,194 |
| MAG03915 | TH2_bin.51 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__;g__;s__ | 91.4 | 4.6 | 58.0 | 12,641 | 2,445,667 |
| MAG03916 | TH2_bin.52 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__B-17B0;f__B-17BO;g__JAHEYG01;s__ | 100.0 | 2.1 | 37.0 | 26,822 | 3,182,415 |
| MAG03917 | TH2_bin.53 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__UBA6906;s__ | 72.89 | 3.48 | 61.0 | 10,351 | 3,451,593 |
| MAG03918 | TH2_bin.56 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__;s__ | 85.51 | 0.96 | 39.0 | 9,670 | 2,477,528 |
| MAG03919 | TH2_bin.57 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira_D;s__ | 91.95 | 6.9 | 58.0 | 7,378 | 3,229,718 |
| MAG03920 | TH2_bin.6 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Palsa-1104;f__Palsa-1104;g__JBDTCO01;s__ | 88.2 | 1.94 | 70.0 | 17,925 | 5,080,606 |
| MAG03921 | TH2_bin.60 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__;s__ | 97.96 | 0.2 | 60.0 | 28,881 | 3,116,545 |
| MAG03922 | TH2_bin.61 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Thermoanaerobaculales;f__Thermoanaerobaculaceae;g__;s__ | 58.88 | 0.1 | 71.0 | 5,139 | 1,722,373 |
| MAG03923 | TH2_bin.64 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__ | 86.52 | 1.07 | 45.0 | 16,365 | 2,331,898 |
| MAG03924 | TH2_bin.65 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Limisphaerales;f__UBA11358;g__WYBW01;s__ | 94.12 | 4.91 | 60.0 | 25,381 | 7,032,004 |
| MAG03925 | TH2_bin.66 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__UBA2031;s__UBA2031 sp003543245 | 97.46 | 1.33 | 58.0 | 12,964 | 2,596,818 |
| MAG03926 | TH2_bin.68 | d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellia;o__UBA8416;f__VGWI01;g__;s__ | 63.47 | 1.61 | 68.0 | 5,162 | 2,440,280 |
| MAG03927 | TH2_bin.69 | d__Bacteria;p__Nitrospirota;c__UBA9217;o__UBA9217;f__UBA9217;g__JAKAHZ01;s__ | 76.05 | 1.44 | 63.0 | 42,818 | 2,598,864 |
| MAG03928 | TH2_bin.7 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__;s__ | 98.7 | 0.97 | 64.0 | 68,251 | 3,837,694 |
| MAG03929 | TH2_bin.8 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA9159;g__;s__ | 67.97 | 0.57 | 56.0 | 4,197 | 1,530,154 |
| MAG03930 | TH2_bin.9 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__UBA877;s__ | 61.24 | 1.73 | 55.0 | 5,614 | 2,797,877 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |