GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0107 |
|---|---|
| Name | WH2 |
| Type | river |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 34.6105556 N 110.253611 E |
| Altitude (m) | 300.7 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2025-04-23 |
| Physicochemical properties | |
| TN (g/kg) | 0.6263 |
| TP (g/kg) | 0.5320 |
| TS (g/kg) | 0.6233 |
| TC (g/kg) | 16.1620 |
| Fe (mg/kg) | 27957.5697 |
| Mn (mg/kg) | 462.6538 |
| C/N | |
| IC (g/kg) | |
| MBC (g/kg) | 0.0773 |
| pH | 7.2200 |
| Water content (%) | 0.2716 |
| NO3- (mg/kg) | 12.5182 |
| NH4+ (mg/kg) | 4.7716 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs23
The MAGs in SMP0107
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG04108 | WH2_bin.10 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Ferrovibrionales;f__Ferrovibrionaceae;g__JAFKFH01;s__ | 98.18 | 4.13 | 68.0 | 24,542 | 7,008,391 |
| MAG04109 | WH2_bin.11 | d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__DSM-12255;g__;s__ | 68.37 | 0.83 | 60.0 | 3,030 | 1,486,020 |
| MAG04110 | WH2_bin.13 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__Burkholderia sp002223055 | 88.12 | 1.34 | 67.0 | 8,921 | 7,132,452 |
| MAG04111 | WH2_bin.16 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SPDF01;s__ | 75.74 | 1.43 | 70.0 | 6,443 | 2,040,901 |
| MAG04112 | WH2_bin.17 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Defluviilinea;s__ | 64.13 | 2.64 | 53.0 | 6,449 | 2,761,561 |
| MAG04113 | WH2_bin.18 | d__Bacteria;p__Bacteroidota_A;c__Ignavibacteria;o__SJA-28;f__B-1AR;g__JAEUSI01;s__JAEUSI01 sp016709315 | 77.16 | 4.58 | 35.0 | 5,634 | 2,661,982 |
| MAG04114 | WH2_bin.19 | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Microbacteriaceae;g__Rhodoluna;s__ | 65.26 | 2.71 | 54.0 | 1,949 | 972,601 |
| MAG04115 | WH2_bin.20 | d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellia;o__UBA8416;f__CAMCYG01;g__CAMCYG01;s__ | 89.21 | 2.54 | 52.0 | 6,412 | 2,330,298 |
| MAG04116 | WH2_bin.23 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__UBA2031;s__ | 71.19 | 3.39 | 59.0 | 8,263 | 2,235,310 |
| MAG04117 | WH2_bin.25 | d__Archaea;p__Halobacteriota;c__Methanosarcinia;o__Methanotrichales;f__Methanotrichaceae;g__Methanothrix;s__Methanothrix soehngenii | 87.24 | 1.34 | 53.0 | 8,226 | 2,090,969 |
| MAG04118 | WH2_bin.28 | d__Bacteria;p__Desulfobacterota;c__Desulfobacteria;o__Desulfobacterales;f__Desulfosalsimonadaceae;g__SURF-3;s__SURF-3 sp003599885 | 82.82 | 1.17 | 50.0 | 4,039 | 2,638,355 |
| MAG04119 | WH2_bin.3 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28;s__PHOS-HE28 sp020847755 | 70.79 | 0.75 | 67.0 | 3,125 | 2,424,245 |
| MAG04120 | WH2_bin.30 | d__Bacteria;p__Bacteroidota_A;c__SZUA-365;o__SZUA-365;f__SZUA-365;g__SZUA-365;s__ | 74.72 | 0.46 | 60.0 | 3,753 | 2,808,585 |
| MAG04121 | WH2_bin.32 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__AKYH767-A;f__OLB10;g__CAADHD01;s__CAADHD01 sp020847635 | 75.14 | 0.26 | 40.0 | 3,675 | 1,688,919 |
| MAG04122 | WH2_bin.33 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Erythrobacter;s__ | 68.17 | 2.02 | 65.0 | 4,835 | 1,972,921 |
| MAG04123 | WH2_bin.35 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__SR-FBR-E99;s__ | 77.5 | 3.38 | 48.0 | 7,717 | 2,865,894 |
| MAG04124 | WH2_bin.37 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter;s__Ferruginibacter pinensis_I | 80.8 | 3.58 | 42.0 | 3,929 | 2,475,172 |
| MAG04125 | WH2_bin.4 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__M3007;s__ | 69.18 | 0.42 | 46.0 | 6,453 | 4,019,373 |
| MAG04126 | WH2_bin.43 | d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Myxococcaceae;g__Archangium_A;s__ | 69.21 | 2.99 | 72.0 | 2,371 | 4,254,500 |
| MAG04127 | WH2_bin.5 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Rhodoferax;s__ | 67.51 | 1.09 | 62.0 | 5,772 | 2,259,675 |
| MAG04128 | WH2_bin.6 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__AKYH767-A;f__OLB10;g__OLB10;s__OLB10 sp016699635 | 89.71 | 0.12 | 37.0 | 14,566 | 2,781,043 |
| MAG04129 | WH2_bin.8 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__GCA-2747695;s__ | 68.59 | 3.49 | 33.0 | 4,266 | 1,638,264 |
| MAG04130 | WH2_bin.9 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__ | 75.37 | 2.18 | 52.0 | 4,428 | 1,322,611 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |