GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0044 |
|---|---|
| Name | HFD2 |
| Type | paddy |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 31.6475 N 117.743333 E |
| Altitude (m) | 6.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 2.2935 |
| TP (g/kg) | 0.6628 |
| TS (g/kg) | 0.2205 |
| TC (g/kg) | 23.7100 |
| Fe (mg/kg) | 21590.3361 |
| Mn (mg/kg) | 343.4874 |
| C/N | 10.3381 |
| IC (g/kg) | 0.8880 |
| MBC (g/kg) | 1.0116 |
| pH | 7.1400 |
| Water content (%) | 0.3596 |
| NO3- (mg/kg) | -4.7915 |
| NH4+ (mg/kg) | 3.6051 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs44
The MAGs in SMP0044
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG01629 | HFD2_bin.1 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Bryobacterales;f__Bryobacteraceae;g__Palsa-187;s__ | 67.67 | 0.14 | 61.0 | 10,878 | 3,730,842 |
| MAG01630 | HFD2_bin.12 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__PSRF01;s__ | 97.86 | 0.57 | 56.0 | 53,494 | 4,907,493 |
| MAG01631 | HFD2_bin.14 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Bryobacterales;f__Bryobacteraceae;g__JAJPJX01;s__ | 87.09 | 6.36 | 67.0 | 22,902 | 6,662,482 |
| MAG01632 | HFD2_bin.17 | d__Bacteria;p__Desulfobacterota_E;c__Deferrimicrobia;o__Deferrimicrobiales;f__Deferrimicrobiaceae;g__FEB-35;s__ | 97.2 | 3.28 | 65.0 | 24,282 | 2,598,669 |
| MAG01633 | HFD2_bin.2 | d__Bacteria;p__Acidobacteriota;c__Polarisedimenticolia;o__Gp22-AA2;f__Gp22-AA2;g__DASRJX01;s__ | 79.48 | 2.77 | 70.0 | 9,639 | 3,195,838 |
| MAG01634 | HFD2_bin.21 | d__Bacteria;p__Eisenbacteria;c__RBG-16-71-46;o__RBG-16-71-46;f__RBG-16-71-46;g__WS-11;s__ | 77.7 | 1.97 | 73.0 | 43,366 | 3,143,847 |
| MAG01635 | HFD2_bin.22 | d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__UBA5189;s__ | 82.41 | 1.79 | 71.0 | 26,905 | 2,911,365 |
| MAG01636 | HFD2_bin.23 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__SZUA-254;g__;s__ | 75.71 | 2.08 | 63.0 | 11,608 | 2,566,259 |
| MAG01637 | HFD2_bin.25 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__JAOTWJ01;s__ | 74.29 | 1.29 | 72.0 | 15,243 | 3,308,884 |
| MAG01638 | HFD2_bin.26 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__SZUA-254;g__DASYTP01;s__ | 76.02 | 1.94 | 54.0 | 8,231 | 2,124,766 |
| MAG01639 | HFD2_bin.27 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__JAABQT01;s__ | 87.44 | 3.17 | 69.0 | 17,323 | 2,941,581 |
| MAG01640 | HFD2_bin.29 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Longimicrobiales;f__RSA9;g__JADGQX01;s__ | 85.91 | 3.62 | 71.0 | 15,573 | 5,157,169 |
| MAG01641 | HFD2_bin.3 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Acidiferrales;f__UBA7541;g__JACQDE01;s__ | 74.05 | 1.42 | 61.0 | 7,986 | 3,233,607 |
| MAG01642 | HFD2_bin.30 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__JAENVT01;s__ | 91.86 | 2.05 | 67.0 | 35,851 | 4,066,849 |
| MAG01643 | HFD2_bin.31 | d__Bacteria;p__Nitrospirota;c__JACRHJ01;o__JACRHJ01;f__JACRHJ01;g__;s__ | 79.33 | 2.01 | 56.0 | 8,056 | 1,878,830 |
| MAG01644 | HFD2_bin.32 | d__Bacteria;p__Acidobacteriota;c__Polarisedimenticolia;o__Gp22-AA2;f__Gp22-AA2;g__DATKFL01;s__ | 89.8 | 3.02 | 72.0 | 35,012 | 4,537,636 |
| MAG01645 | HFD2_bin.33 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__UBA6906;s__ | 100.0 | 0.0 | 62.0 | 136,562 | 4,263,222 |
| MAG01646 | HFD2_bin.34 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Aggregatilineales;f__UBA2796;g__JAJPHV01;s__ | 90.77 | 5.81 | 59.0 | 7,034 | 8,027,813 |
| MAG01647 | HFD2_bin.35 | d__Bacteria;p__Eisenbacteria;c__RBG-16-71-46;o__JABDJR01;f__JAWXBZ01;g__;s__ | 80.57 | 1.41 | 66.0 | 5,380 | 3,927,238 |
| MAG01648 | HFD2_bin.36 | d__Bacteria;p__Acidobacteriota;c__Polarisedimenticolia;o__Polarisedimenticolales;f__DASRJG01;g__;s__ | 100.0 | 4.04 | 71.0 | 38,652 | 4,420,836 |
| MAG01649 | HFD2_bin.38 | d__Bacteria;p__Acidobacteriota;c__Polarisedimenticolia;o__Gp22-AA2;f__AA152;g__DASYRE01;s__ | 69.96 | 1.89 | 67.0 | 4,077 | 2,954,132 |
| MAG01650 | HFD2_bin.39 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__CSP1-6;g__;s__ | 81.09 | 4.4 | 70.0 | 30,540 | 4,734,090 |
| MAG01651 | HFD2_bin.40 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__JADJOM01;s__ | 86.06 | 0.88 | 69.0 | 51,574 | 4,205,901 |
| MAG01652 | HFD2_bin.43 | d__Bacteria;p__Nitrospirota;c__JACRHJ01;o__JACRHJ01;f__JACRHJ01;g__;s__ | 89.95 | 3.13 | 62.0 | 14,770 | 2,413,115 |
| MAG01653 | HFD2_bin.45 | d__Bacteria;p__Nitrospirota;c__JACRHJ01;o__JACRHJ01;f__JACRHJ01;g__;s__ | 90.32 | 2.94 | 60.0 | 17,035 | 2,329,784 |
| MAG01654 | HFD2_bin.46 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Micropepsales;f__Micropepsaceae;g__CAIYRG01;s__ | 90.55 | 2.77 | 62.0 | 25,021 | 4,568,511 |
| MAG01655 | HFD2_bin.47 | d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__JALYGJ01;s__ | 55.04 | 0.42 | 69.0 | 9,790 | 1,631,064 |
| MAG01656 | HFD2_bin.48 | d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Anaeromyxobacteraceae;g__DASTPH01;s__ | 81.07 | 3.89 | 76.0 | 14,660 | 2,987,421 |
| MAG01657 | HFD2_bin.49 | d__Bacteria;p__Acidobacteriota;c__Polarisedimenticolia;o__JACPZX01;f__DASXTC01;g__DATEEA01;s__ | 84.85 | 0.67 | 70.0 | 11,507 | 2,987,279 |
| MAG01658 | HFD2_bin.5 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Bin65;f__Bin65;g__SBBV01;s__ | 67.27 | 2.61 | 67.0 | 5,085 | 3,132,364 |
| MAG01659 | HFD2_bin.51 | d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Anaeromyxobacteraceae;g__DATBLK01;s__ | 99.62 | 6.69 | 73.0 | 43,853 | 4,011,638 |
| MAG01660 | HFD2_bin.52 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Labilithrix;s__ | 51.55 | 0.23 | 62.0 | 3,664 | 7,382,607 |
| MAG01661 | HFD2_bin.53 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__Gp7-AA6;g__Gp7-AA6;s__ | 86.02 | 1.79 | 67.0 | 23,259 | 3,407,686 |
| MAG01662 | HFD2_bin.54 | d__Bacteria;p__Chloroflexota;c__UBA6077;o__UBA6077;f__JACCZL01;g__;s__ | 78.01 | 3.7 | 66.0 | 4,456 | 4,297,757 |
| MAG01663 | HFD2_bin.55 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Caulobacterales;f__TH1-2;g__Vitreimonas;s__ | 68.47 | 2.64 | 63.0 | 8,647 | 2,544,929 |
| MAG01664 | HFD2_bin.56 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__Gp7-AA6;g__JAWOLE01;s__ | 87.38 | 0.0 | 67.0 | 59,632 | 4,152,721 |
| MAG01665 | HFD2_bin.59 | d__Bacteria;p__Eisenbacteria;c__RBG-16-71-46;o__RBG-16-71-46;f__RBG-16-71-46;g__JAIOPA01;s__ | 67.93 | 1.67 | 72.0 | 18,106 | 3,411,672 |
| MAG01666 | HFD2_bin.60 | d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UBA9968;f__UBA9968;g__JACPFE01;s__ | 81.44 | 4.67 | 58.0 | 5,906 | 3,966,048 |
| MAG01667 | HFD2_bin.64 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__DASTHG01;s__ | 75.89 | 2.02 | 70.0 | 5,028 | 2,621,050 |
| MAG01668 | HFD2_bin.65 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Fen-336;f__Fen-336;g__JAICEW01;s__ | 89.37 | 4.02 | 73.0 | 24,321 | 4,821,772 |
| MAG01669 | HFD2_bin.67 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__JAENVT01;s__ | 86.09 | 3.64 | 67.0 | 22,470 | 3,843,311 |
| MAG01670 | HFD2_bin.7 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Piscinibacter;s__ | 69.37 | 0.79 | 71.0 | 9,939 | 3,899,816 |
| MAG01671 | HFD2_bin.8 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__JAERML01;s__ | 64.01 | 0.13 | 57.0 | 4,466 | 1,878,976 |
| MAG01672 | HFD2_bin.9 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__SCGC-AG-212-J23;s__ | 84.2 | 6.44 | 69.0 | 12,753 | 3,318,053 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |